ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast34d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197195.1| Oryza sativa (japonica cultivar-group) unknown ... 224 2e-55
2gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 gen... 224 2e-55
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
4dbj|AK061011.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 2e-55
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 224 2e-55
6ref|XM_465105.1| Oryza sativa (japonica cultivar-group), mRNA 86 1e-13
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
8dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
9gb|BT019153.1| Zea mays clone Contig816.F mRNA sequence 58 2e-05
10dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.092
11dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.092
12dbj|AK101596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.092
13ref|XM_329522.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.4
14ref|XM_958054.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.4
15emb|AL356324.1|NCB9J10 Neurospora crassa DNA linkage group II BA... 42 1.4
16gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 42 1.4
17gb|AY846842.1| Trametes sp. AH28-2 laccase B (lacB) gene, comple... 40 5.7
18gb|AY839938.1| Trametes sp. AH28-2 laccase D (lacD) gene, partia... 40 5.7
19ref|NM_188355.1| Oryza sativa (japonica cultivar-group), predic... 40 5.7
20gb|U15177.1|HSU15177 Human cosmid CRI-JC2015 at D10S289 in 10sp13 40 5.7
21gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 40 5.7
22gb|AC159430.1| Trypanosoma brucei chromosome 3 clone RPCI93-28C2... 40 5.7
23ref|XM_897923.2| PREDICTED: Mus musculus bromodomain and WD repe... 40 5.7
24ref|XM_819207.1| Trypanosoma brucei TREU927 clone RPCI93-28C22 p... 40 5.7
25emb|AL157395.17| Human DNA sequence from clone RP11-414H17 on ch... 40 5.7
26gb|BC008131.2| Homo sapiens cDNA clone IMAGE:3454038 40 5.7
27gb|BC054847.1| Mus musculus cDNA clone IMAGE:6492957, partial cds 40 5.7
28emb|Z12156.1|BLACCASEG Basidiomycete gene for laccase 40 5.7
29emb|X92503.1|MSORIREP M.smegmatis origin of replication and gene... 40 5.7
30emb|X94224.1|MSGYRBA M.smegmatis gyrB and gyrA genes 40 5.7
31emb|AJ294820.1|TTR294820 Trametes trogii lcc1 gene for laccase, ... 40 5.7
32gb|DQ431716.1| Coriolopsis gallica laccase (lac1) mRNA, complete... 40 5.7
33gb|DQ431715.1| Coriolopsis gallica laccase (lac1) gene, complete... 40 5.7
34gb|AE005768.1| Caulobacter crescentus CB15 section 94 of 359 of ... 40 5.7
35dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.7
36gb|AF162785.1| Basidiomycete C30 polyphenoloxidase (LAC1) gene, ... 40 5.7
37dbj|AK139563.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 40 5.7
38ref|XM_938400.1| PREDICTED: Homo sapiens hypothetical protein BC... 40 5.7
39ref|XM_495796.2| PREDICTED: Homo sapiens hypothetical protein BC... 40 5.7
40gb|AC027338.5| Homo sapiens chromosome 5 clone CTD-2227C6, compl... 40 5.7
41gb|M73782.1|CCRFLBF Caulobacter crescentus flagellar protein (fl... 40 5.7
42gb|M69228.1|CCRFLBDBA Caulobacter crescentus putative (fliN) gen... 40 5.7
43dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
44gb|AF491759.1| Trametes sp. C30 laccase 1 (lac1) mRNA, complete cds 40 5.7
45gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.7
46dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
47gb|BC082562.1| Mus musculus bromodomain and WD repeat domain con... 40 5.7
48gb|BC046446.1| Mus musculus bromodomain and WD repeat domain con... 40 5.7
49dbj|AK073127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.7
50gb|AY875867.1| Coriolopsis gallica laccase (lacA) mRNA, partial cds 40 5.7
51emb|BX000698.11| Mouse DNA sequence from clone RP23-460G6 on chr... 40 5.7 
>ref|NM_197195.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0078O01.5), mRNA
          Length = 1381

 Score =  224 bits (113), Expect = 2e-55
 Identities = 160/175 (91%), Gaps = 3/175 (1%)
 Strand = Plus / Plus

                                                                       
Query: 245 gcgacttctgctggctcacgcaggaggacctcgtccgctacttcctcaactccatctccc 304
           |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gcgactactgctggttgacgcaggaggacctcgtccgctacttcctcaactccatctccc 505

                                                                       
Query: 305 tcttctaccatgtcgccgcccgctccgtctcctccctcggcctcgtgcgccc---cgatt 361
           |||||| ||||||||||| ||||||||||||||||||||||||||||||| |   |||  
Sbjct: 506 tcttctcccatgtcgccggccgctccgtctcctccctcggcctcgtgcgcgccgacgacc 565

                                                                  
Query: 362 tcctgtcggtgcggcccgacgaggcagccctgtccgccgtgcccctcatccgccg 416
           ||||  ||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 566 tcctcacggtgcggccccacgaggcagccctgtccgccgtgcccctcctccgccg 620



 Score =  121 bits (61), Expect = 2e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                       
Query: 93  caaggacggcgccggcgaggtccgccgcgtagatccccgttcaagtgtcttggaagcgct 152
           |||||||||||||||||||||||||||||| || |||||  | ||||| ||||| |||||
Sbjct: 288 caaggacggcgccggcgaggtccgccgcgtcgacccccgcgccagtgtgttggaggcgct 347

                                                                       
Query: 153 tgatgagatcctgagcggcgcgcaggtgctcgccgtcccaatacgcccgggcggccgcaa 212
           |||||   || ||||||||||||||||||||||||||||  | ||| | |||||||| | 
Sbjct: 348 tgatgccgtcttgagcggcgcgcaggtgctcgccgtccctctccgctccggcggccggag 407

                            
Query: 213 gaagcagctgggcggcg 229
           ||||||||| |||||||
Sbjct: 408 gaagcagctcggcggcg 424
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>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete
             sequence
          Length = 146664

 Score =  224 bits (113), Expect = 2e-55
 Identities = 160/175 (91%), Gaps = 3/175 (1%)
 Strand = Plus / Plus

                                                                         
Query: 245   gcgacttctgctggctcacgcaggaggacctcgtccgctacttcctcaactccatctccc 304
             |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42146 gcgactactgctggttgacgcaggaggacctcgtccgctacttcctcaactccatctccc 42205

                                                                         
Query: 305   tcttctaccatgtcgccgcccgctccgtctcctccctcggcctcgtgcgccc---cgatt 361
             |||||| ||||||||||| ||||||||||||||||||||||||||||||| |   |||  
Sbjct: 42206 tcttctcccatgtcgccggccgctccgtctcctccctcggcctcgtgcgcgccgacgacc 42265

                                                                    
Query: 362   tcctgtcggtgcggcccgacgaggcagccctgtccgccgtgcccctcatccgccg 416
             ||||  ||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 42266 tcctcacggtgcggccccacgaggcagccctgtccgccgtgcccctcctccgccg 42320



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                         
Query: 136   agtgtcttggaagcgcttgatgagatcctgagcggcgcgcaggtgctcgccgtcccaata 195
             ||||| ||||| ||||||||||   || ||||||||||||||||||||||||||||  | 
Sbjct: 42031 agtgtgttggaggcgcttgatgccgtcttgagcggcgcgcaggtgctcgccgtccctctc 42090

                                               
Query: 196   cgcccgggcggccgcaagaagcagctgggcggcg 229
             ||| | |||||||| | ||||||||| |||||||
Sbjct: 42091 cgctccggcggccggaggaagcagctcggcggcg 42124



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                    
Query: 93    caaggacggcgccggcgaggtccgccgcgtagatccccg 131
             |||||||||||||||||||||||||||||| || |||||
Sbjct: 41156 caaggacggcgccggcgaggtccgccgcgtcgacccccg 41194
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  224 bits (113), Expect = 2e-55
 Identities = 160/175 (91%), Gaps = 3/175 (1%)
 Strand = Plus / Plus

                                                                            
Query: 245      gcgacttctgctggctcacgcaggaggacctcgtccgctacttcctcaactccatctccc 304
                |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18539135 gcgactactgctggttgacgcaggaggacctcgtccgctacttcctcaactccatctccc 18539194

                                                                            
Query: 305      tcttctaccatgtcgccgcccgctccgtctcctccctcggcctcgtgcgccc---cgatt 361
                |||||| ||||||||||| ||||||||||||||||||||||||||||||| |   |||  
Sbjct: 18539195 tcttctcccatgtcgccggccgctccgtctcctccctcggcctcgtgcgcgccgacgacc 18539254

                                                                       
Query: 362      tcctgtcggtgcggcccgacgaggcagccctgtccgccgtgcccctcatccgccg 416
                ||||  ||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 18539255 tcctcacggtgcggccccacgaggcagccctgtccgccgtgcccctcctccgccg 18539309



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                            
Query: 136      agtgtcttggaagcgcttgatgagatcctgagcggcgcgcaggtgctcgccgtcccaata 195
                ||||| ||||| ||||||||||   || ||||||||||||||||||||||||||||  | 
Sbjct: 18539020 agtgtgttggaggcgcttgatgccgtcttgagcggcgcgcaggtgctcgccgtccctctc 18539079

                                                  
Query: 196      cgcccgggcggccgcaagaagcagctgggcggcg 229
                ||| | |||||||| | ||||||||| |||||||
Sbjct: 18539080 cgctccggcggccggaggaagcagctcggcggcg 18539113



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 93       caaggacggcgccggcgaggtccgccgcgtagatccccg 131
                |||||||||||||||||||||||||||||| || |||||
Sbjct: 18538145 caaggacggcgccggcgaggtccgccgcgtcgacccccg 18538183
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>dbj|AK061011.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-B02, full
           insert sequence
          Length = 1065

 Score =  224 bits (113), Expect = 2e-55
 Identities = 160/175 (91%), Gaps = 3/175 (1%)
 Strand = Plus / Plus

                                                                       
Query: 245 gcgacttctgctggctcacgcaggaggacctcgtccgctacttcctcaactccatctccc 304
           |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gcgactactgctggttgacgcaggaggacctcgtccgctacttcctcaactccatctccc 196

                                                                       
Query: 305 tcttctaccatgtcgccgcccgctccgtctcctccctcggcctcgtgcgccc---cgatt 361
           |||||| ||||||||||| ||||||||||||||||||||||||||||||| |   |||  
Sbjct: 197 tcttctcccatgtcgccggccgctccgtctcctccctcggcctcgtgcgcgccgacgacc 256

                                                                  
Query: 362 tcctgtcggtgcggcccgacgaggcagccctgtccgccgtgcccctcatccgccg 416
           ||||  ||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 257 tcctcacggtgcggccccacgaggcagccctgtccgccgtgcccctcctccgccg 311



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                       
Query: 136 agtgtcttggaagcgcttgatgagatcctgagcggcgcgcaggtgctcgccgtcccaata 195
           ||||| ||||| ||||||||||   || ||||||||||||||||||||||||||||  | 
Sbjct: 22  agtgtgttggaggcgcttgatgccgtcttgagcggcgcgcaggtgctcgccgtccctctc 81

                                             
Query: 196 cgcccgggcggccgcaagaagcagctgggcggcg 229
           ||| | |||||||| | ||||||||| |||||||
Sbjct: 82  cgctccggcggccggaggaagcagctcggcggcg 115
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  224 bits (113), Expect = 2e-55
 Identities = 160/175 (91%), Gaps = 3/175 (1%)
 Strand = Plus / Plus

                                                                            
Query: 245      gcgacttctgctggctcacgcaggaggacctcgtccgctacttcctcaactccatctccc 304
                |||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18549188 gcgactactgctggttgacgcaggaggacctcgtccgctacttcctcaactccatctccc 18549247

                                                                            
Query: 305      tcttctaccatgtcgccgcccgctccgtctcctccctcggcctcgtgcgccc---cgatt 361
                |||||| ||||||||||| ||||||||||||||||||||||||||||||| |   |||  
Sbjct: 18549248 tcttctcccatgtcgccggccgctccgtctcctccctcggcctcgtgcgcgccgacgacc 18549307

                                                                       
Query: 362      tcctgtcggtgcggcccgacgaggcagccctgtccgccgtgcccctcatccgccg 416
                ||||  ||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 18549308 tcctcacggtgcggccccacgaggcagccctgtccgccgtgcccctcctccgccg 18549362



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                            
Query: 136      agtgtcttggaagcgcttgatgagatcctgagcggcgcgcaggtgctcgccgtcccaata 195
                ||||| ||||| ||||||||||   || ||||||||||||||||||||||||||||  | 
Sbjct: 18549073 agtgtgttggaggcgcttgatgccgtcttgagcggcgcgcaggtgctcgccgtccctctc 18549132

                                                  
Query: 196      cgcccgggcggccgcaagaagcagctgggcggcg 229
                ||| | |||||||| | ||||||||| |||||||
Sbjct: 18549133 cgctccggcggccggaggaagcagctcggcggcg 18549166



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 93       caaggacggcgccggcgaggtccgccgcgtagatccccg 131
                |||||||||||||||||||||||||||||| || |||||
Sbjct: 18548198 caaggacggcgccggcgaggtccgccgcgtcgacccccg 18548236
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>ref|XM_465105.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 483

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                       
Query: 324 ccgctccgtctcctccctcggcctcgtgcgccccgatttcctgtcggtgcggcccgacga 383
           |||||||||||||||||||||||| |||| | | ||   |||  ||||||| ||| ||||
Sbjct: 300 ccgctccgtctcctccctcggccttgtgcacgctgacgacctcacggtgcgtccccacga 241

                                          
Query: 384 ggcagccctgtccgccgtgcccctcatccgc 414
           ||||||||||||||||||||||||| |||||
Sbjct: 240 ggcagccctgtccgccgtgcccctcctccgc 210
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                            
Query: 324      ccgctccgtctcctccctcggcctcgtgcgccccgatttcctgtcggtgcggcccgacga 383
                |||||||||||||||||||||||| |||| | | ||   |||  ||||||| ||| ||||
Sbjct: 11548477 ccgctccgtctcctccctcggccttgtgcacgctgacgacctcacggtgcgtccccacga 11548418

                                               
Query: 384      ggcagccctgtccgccgtgcccctcatccgc 414
                ||||||||||||||||||||||||| |||||
Sbjct: 11548417 ggcagccctgtccgccgtgcccctcctccgc 11548387



 Score = 46.1 bits (23), Expect = 0.092
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                            
Query: 293      actccatctccctcttctaccatgtcgccgcccgctccgtctcctccctcggcctcgtgc 352
                ||||||||||||| |||  ||  ||||| || ||| ||||| |||||||||||||||| |
Sbjct: 25665890 actccatctccctgttcgcccccgtcgcggcgcgcaccgtcgcctccctcggcctcgtcc 25665949

                   
Query: 353      gcc 355
                |||
Sbjct: 25665950 gcc 25665952
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>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0030M21
          Length = 155970

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                          
Query: 324    ccgctccgtctcctccctcggcctcgtgcgccccgatttcctgtcggtgcggcccgacga 383
              |||||||||||||||||||||||| |||| | | ||   |||  ||||||| ||| ||||
Sbjct: 130969 ccgctccgtctcctccctcggccttgtgcacgctgacgacctcacggtgcgtccccacga 130910

                                             
Query: 384    ggcagccctgtccgccgtgcccctcatccgc 414
              ||||||||||||||||||||||||| |||||
Sbjct: 130909 ggcagccctgtccgccgtgcccctcctccgc 130879
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>gb|BT019153.1| Zea mays clone Contig816.F mRNA sequence
          Length = 785

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 388 gccctgtccgccgtgcccctcatccgccg 416
           |||||||||||||||||||||||||||||
Sbjct: 782 gccctgtccgccgtgcccctcatccgccg 754
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>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0014E22
          Length = 157627

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                          
Query: 293    actccatctccctcttctaccatgtcgccgcccgctccgtctcctccctcggcctcgtgc 352
              ||||||||||||| |||  ||  ||||| || ||| ||||| |||||||||||||||| |
Sbjct: 135937 actccatctccctgttcgcccccgtcgcggcgcgcaccgtcgcctccctcggcctcgtcc 135996

                 
Query: 353    gcc 355
              |||
Sbjct: 135997 gcc 135999
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>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0010C01
          Length = 186185

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 293   actccatctccctcttctaccatgtcgccgcccgctccgtctcctccctcggcctcgtgc 352
             ||||||||||||| |||  ||  ||||| || ||| ||||| |||||||||||||||| |
Sbjct: 68566 actccatctccctgttcgcccccgtcgcggcgcgcaccgtcgcctccctcggcctcgtcc 68625

                
Query: 353   gcc 355
             |||
Sbjct: 68626 gcc 68628
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>dbj|AK101596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051G14, full
           insert sequence
          Length = 1626

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 293 actccatctccctcttctaccatgtcgccgcccgctccgtctcctccctcggcctcgtgc 352
           ||||||||||||| |||  ||  ||||| || ||| ||||| |||||||||||||||| |
Sbjct: 772 actccatctccctgttcgcccccgtcgcggcgcgcaccgtcgcctccctcggcctcgtcc 831

              
Query: 353 gcc 355
           |||
Sbjct: 832 gcc 834
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>ref|XM_329522.1| Neurospora crassa OR74A hypothetical protein (NCU08478.1) partial
           mRNA
          Length = 1167

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 287 tcctcaactccatctccctct 307
           |||||||||||||||||||||
Sbjct: 80  tcctcaactccatctccctct 100
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>ref|XM_958054.1| Neurospora crassa OR74A hypothetical protein (NCU08478.1) partial
           mRNA
          Length = 1167

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 287 tcctcaactccatctccctct 307
           |||||||||||||||||||||
Sbjct: 80  tcctcaactccatctccctct 100
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>emb|AL356324.1|NCB9J10 Neurospora crassa DNA linkage group II BAC clone B9J10
          Length = 66924

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 287   tcctcaactccatctccctct 307
             |||||||||||||||||||||
Sbjct: 51319 tcctcaactccatctccctct 51299
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 164    tgagcggcgcgcaggtgctcg 184
              |||||||||||||||||||||
Sbjct: 272206 tgagcggcgcgcaggtgctcg 272226
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>gb|AY846842.1| Trametes sp. AH28-2 laccase B (lacB) gene, complete cds
          Length = 5295

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  agatcctgagcggcgcgcag 177
            ||||||||||||||||||||
Sbjct: 2589 agatcctgagcggcgcgcag 2608
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>gb|AY839938.1| Trametes sp. AH28-2 laccase D (lacD) gene, partial cds
          Length = 2242

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  agatcctgagcggcgcgcag 177
            ||||||||||||||||||||
Sbjct: 1839 agatcctgagcggcgcgcag 1858
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>ref|NM_188355.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1839

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   aggacggcgccggcgaggtc 114
            ||||||||||||||||||||
Sbjct: 1391 aggacggcgccggcgaggtc 1372
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>gb|U15177.1|HSU15177 Human cosmid CRI-JC2015 at D10S289 in 10sp13
          Length = 43599

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    tcctctgcctcctctgctcc 30
             ||||||||||||||||||||
Sbjct: 32628 tcctctgcctcctctgctcc 32647
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>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 216     gcagctgggcggcgtcgctg 235
               ||||||||||||||||||||
Sbjct: 1131352 gcagctgggcggcgtcgctg 1131371
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>gb|AC159430.1| Trypanosoma brucei chromosome 3 clone RPCI93-28C22, complete sequence
          Length = 142068

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   gcagctgggcggcgtcgctg 235
             ||||||||||||||||||||
Sbjct: 16225 gcagctgggcggcgtcgctg 16206
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>ref|XM_897923.2| PREDICTED: Mus musculus bromodomain and WD repeat domain containing
            3, transcript variant 6 (Brwd3), mRNA
          Length = 6434

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 11   tcctctgcctcctctgctcc 30
            ||||||||||||||||||||
Sbjct: 5281 tcctctgcctcctctgctcc 5262
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>ref|XM_819207.1| Trypanosoma brucei TREU927 clone RPCI93-28C22 phosphatidylinositol
            4-kinase alpha (Tb927.3.4020) partial mRNA
          Length = 6939

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 216  gcagctgggcggcgtcgctg 235
            ||||||||||||||||||||
Sbjct: 2797 gcagctgggcggcgtcgctg 2778
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>emb|AL157395.17| Human DNA sequence from clone RP11-414H17 on chromosome 10 Contains the
              5' end of the IL2RA gene for interleukin 2 receptor, alpha
              (CD25,IL2R,TCGFR), a ribosomal protein L32 (RPL32)
              pseudogene, the gene for splicing factor (45kD)
              (SPF45)(MGC14439), the 5' end of the PFKFB3 gene for
              6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, four
              novel genes and five CpG islands, complete sequence
          Length = 174839

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     tcctctgcctcctctgctcc 30
              ||||||||||||||||||||
Sbjct: 116424 tcctctgcctcctctgctcc 116405
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>gb|BC008131.2| Homo sapiens cDNA clone IMAGE:3454038
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  tcctctgcctcctctgctcc 30
           ||||||||||||||||||||
Sbjct: 558 tcctctgcctcctctgctcc 539
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>gb|BC054847.1| Mus musculus cDNA clone IMAGE:6492957, partial cds
          Length = 2425

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  tcctctgcctcctctgctcc 30
           ||||||||||||||||||||
Sbjct: 628 tcctctgcctcctctgctcc 609
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>emb|Z12156.1|BLACCASEG Basidiomycete gene for laccase
          Length = 2780

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  agatcctgagcggcgcgcag 177
            ||||||||||||||||||||
Sbjct: 1959 agatcctgagcggcgcgcag 1978
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>emb|X92503.1|MSORIREP M.smegmatis origin of replication and genes rpmH, dnaA, dnaN, gnd,
            recF, gyrB, gyrA
          Length = 10430

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 368  cggtgcggcccgacgaggca 387
            ||||||||||||||||||||
Sbjct: 5826 cggtgcggcccgacgaggca 5807
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>emb|X94224.1|MSGYRBA M.smegmatis gyrB and gyrA genes
          Length = 6000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 368 cggtgcggcccgacgaggca 387
           ||||||||||||||||||||
Sbjct: 142 cggtgcggcccgacgaggca 123
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>emb|AJ294820.1|TTR294820 Trametes trogii lcc1 gene for laccase, exons 1-11
          Length = 2431

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  agatcctgagcggcgcgcag 177
            ||||||||||||||||||||
Sbjct: 1916 agatcctgagcggcgcgcag 1935
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>gb|DQ431716.1| Coriolopsis gallica laccase (lac1) mRNA, complete cds
          Length = 1891

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  agatcctgagcggcgcgcag 177
            ||||||||||||||||||||
Sbjct: 1161 agatcctgagcggcgcgcag 1180
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>gb|DQ431715.1| Coriolopsis gallica laccase (lac1) gene, complete cds
          Length = 2338

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  agatcctgagcggcgcgcag 177
            ||||||||||||||||||||
Sbjct: 1667 agatcctgagcggcgcgcag 1686
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>gb|AE005768.1| Caulobacter crescentus CB15 section 94 of 359 of the complete genome
          Length = 11751

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   cggcgccggcgaggtccgcc 118
            ||||||||||||||||||||
Sbjct: 1463 cggcgccggcgaggtccgcc 1482
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 161     tcctgagcggcgcgcaggtgctcg 184
               ||||| ||||||||||||||||||
Sbjct: 3892066 tcctgggcggcgcgcaggtgctcg 3892043
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>gb|AF162785.1| Basidiomycete C30 polyphenoloxidase (LAC1) gene, complete cds
          Length = 2800

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  agatcctgagcggcgcgcag 177
            ||||||||||||||||||||
Sbjct: 1975 agatcctgagcggcgcgcag 1994
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>dbj|AK139563.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
           clone:B020004N01 product:hypothetical Glycine-rich
           region profile/Arginine-rich region profile/Serine-rich
           region profile containing protein, full insert sequence
          Length = 1427

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  tcctctgcctcctctgctcc 30
           ||||||||||||||||||||
Sbjct: 275 tcctctgcctcctctgctcc 256
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>ref|XM_938400.1| PREDICTED: Homo sapiens hypothetical protein BC008131 (LOC142937),
           mRNA
          Length = 1054

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  tcctctgcctcctctgctcc 30
           ||||||||||||||||||||
Sbjct: 552 tcctctgcctcctctgctcc 533
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>ref|XM_495796.2| PREDICTED: Homo sapiens hypothetical protein BC008131 (LOC142937),
           mRNA
          Length = 1054

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  tcctctgcctcctctgctcc 30
           ||||||||||||||||||||
Sbjct: 552 tcctctgcctcctctgctcc 533
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>gb|AC027338.5| Homo sapiens chromosome 5 clone CTD-2227C6, complete sequence
          Length = 117813

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   ctccatctccctcttctacc 313
             ||||||||||||||||||||
Sbjct: 30330 ctccatctccctcttctacc 30349
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>gb|M73782.1|CCRFLBF Caulobacter crescentus flagellar protein (flbF) gene, complete cds
          Length = 3297

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   cggcgccggcgaggtccgcc 118
            ||||||||||||||||||||
Sbjct: 1569 cggcgccggcgaggtccgcc 1588
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>gb|M69228.1|CCRFLBDBA Caulobacter crescentus putative (fliN) gene, partial cds; and flbD
            (flbD) and putative (flbF) genes, complete cds
          Length = 4424

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   cggcgccggcgaggtccgcc 118
            ||||||||||||||||||||
Sbjct: 3273 cggcgccggcgaggtccgcc 3292
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 95      aggacggcgccggcgaggtc 114
               ||||||||||||||||||||
Sbjct: 5841184 aggacggcgccggcgaggtc 5841203
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>gb|AF491759.1| Trametes sp. C30 laccase 1 (lac1) mRNA, complete cds
          Length = 1869

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  agatcctgagcggcgcgcag 177
            ||||||||||||||||||||
Sbjct: 1162 agatcctgagcggcgcgcag 1181
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 157     gagatcctgagcggcgcgcaggtgctcg 184
               ||||||| |||| |||||||||||||||
Sbjct: 1602008 gagatccagagcagcgcgcaggtgctcg 1601981



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 99     cggcgccggcgaggtccgccgcgt 122
              ||||||||||| ||||||||||||
Sbjct: 406547 cggcgccggcgcggtccgccgcgt 406524
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>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0016I09
          Length = 148517

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    aggacggcgccggcgaggtc 114
             ||||||||||||||||||||
Sbjct: 44925 aggacggcgccggcgaggtc 44944
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>gb|BC082562.1| Mus musculus bromodomain and WD repeat domain containing 3, mRNA
           (cDNA clone IMAGE:30605368), partial cds
          Length = 2064

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  tcctctgcctcctctgctcc 30
           ||||||||||||||||||||
Sbjct: 890 tcctctgcctcctctgctcc 871
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>gb|BC046446.1| Mus musculus bromodomain and WD repeat domain containing 3, mRNA
           (cDNA clone IMAGE:4020262)
          Length = 2022

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  tcctctgcctcctctgctcc 30
           ||||||||||||||||||||
Sbjct: 826 tcctctgcctcctctgctcc 807
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>dbj|AK073127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033011F02, full
           insert sequence
          Length = 2041

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 95  aggacggcgccggcgaggtc 114
           ||||||||||||||||||||
Sbjct: 458 aggacggcgccggcgaggtc 477
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>gb|AY875867.1| Coriolopsis gallica laccase (lacA) mRNA, partial cds
          Length = 1488

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  agatcctgagcggcgcgcag 177
            ||||||||||||||||||||
Sbjct: 1058 agatcctgagcggcgcgcag 1077
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>emb|BX000698.11| Mouse DNA sequence from clone RP23-460G6 on chromosome X, complete
             sequence
          Length = 76941

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    tcctctgcctcctctgctcc 30
             ||||||||||||||||||||
Sbjct: 41297 tcctctgcctcctctgctcc 41316


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,056,783
Number of Sequences: 3902068
Number of extensions: 3056783
Number of successful extensions: 63505
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62680
Number of HSP's gapped (non-prelim): 825
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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