| Clone Name | bast34a06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 pre... | 70 | 9e-13 | 2 | FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 p... | 66 | 2e-11 | 3 | FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 pre... | 61 | 6e-10 | 4 | RADA_PICTO (Q6L126) DNA repair and recombination protein radA | 28 | 7.0 | 5 | CNX1_ARATH (Q39054) Molybdopterin biosynthesis CNX1 protein (Mol... | 27 | 9.2 |
|---|
>FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 precursor| Length = 424 Score = 70.5 bits (171), Expect = 9e-13 Identities = 31/66 (46%), Positives = 47/66 (71%) Frame = +1 Query: 181 YNITKILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGSLAGGGRTLQTIRH 360 +N+T++L +P +S F+ LTQT LA +IN+RRTITV V N+ M +L G TL T+++ Sbjct: 25 HNVTRLLANHPSFSSFSHFLTQTHLADEINRRRTITVCAVDNAAMSALTSKGYTLSTLKN 84 Query: 361 MLQIHV 378 +L +HV Sbjct: 85 ILSLHV 90
>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor| Length = 422 Score = 66.2 bits (160), Expect = 2e-11 Identities = 35/67 (52%), Positives = 46/67 (68%) Frame = +1 Query: 178 GYNITKILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGSLAGGGRTLQTIR 357 G+NIT+IL + PEYS FN L+QT+LA +IN R TITVLV+ N M SLA G L ++ Sbjct: 25 GHNITQILSDTPEYSSFNNYLSQTKLADEINSRTTITVLVLNNGAMSSLA-GKHPLSVVK 83 Query: 358 HMLQIHV 378 + L + V Sbjct: 84 NALSLLV 90
>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor| (AtAGP8) Length = 420 Score = 61.2 bits (147), Expect = 6e-10 Identities = 29/50 (58%), Positives = 38/50 (76%) Frame = +1 Query: 181 YNITKILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGSLAG 330 +NIT+IL + P+YS FN L+QT+LA +IN R TITVLV+ N M +LAG Sbjct: 26 HNITQILADSPDYSSFNSYLSQTKLADEINSRTTITVLVLNNGAMSALAG 75
>RADA_PICTO (Q6L126) DNA repair and recombination protein radA| Length = 323 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = +1 Query: 193 KILGEYPEYSQFNKLLTQTRLAQDINKRRTITVLVVANSDMGSLAGGGRTLQTI 354 KI+ +Y+ T + +NKR+ I L +S++ +L GGG Q+I Sbjct: 59 KIINAARKYADVGNFETGEEI---LNKRKEIKKLTTGSSNLDNLLGGGLETQSI 109
>CNX1_ARATH (Q39054) Molybdopterin biosynthesis CNX1 protein (Molybdenum| cofactor biosynthesis enzyme CNX1) Length = 670 Score = 27.3 bits (59), Expect = 9.2 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 9/67 (13%) Frame = +1 Query: 190 TKILGEYPEYSQFNKLLTQTRLAQDINK-----RRTITVLV----VANSDMGSLAGGGRT 342 TK++G+ S+ K+L QT+ DI + + TVL + S++G LA G T Sbjct: 124 TKVIGDVSTESKRVKILIQTKKGTDIRRVGCDIEKDATVLTTGERIGASEIGLLATAGVT 183 Query: 343 LQTIRHM 363 + + M Sbjct: 184 MVKVYPM 190 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,944,728 Number of Sequences: 219361 Number of extensions: 264737 Number of successful extensions: 1134 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1096 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1134 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)