| Clone Name | bast33g09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U81318.1|TAU81318 Triticum aestivum poly(A)-binding protein (wheatpab) mRNA, complete cds Length = 2237 Score = 573 bits (289), Expect = e-160 Identities = 337/353 (95%) Strand = Plus / Plus Query: 1 tgacttgaaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcggga 60 |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 738 tgacttgaaggaaatctttgggaagtttggagcaataacaagtgttgttgtaatgcggga 797 Query: 61 tggggatggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgc 120 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 798 tggggatggaagatccaagtgttttggatttgtgaattttgaaagtccagatgaagctgc 857 Query: 121 tctggctgttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaag 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 858 tctggctgttcaagatttgaatggcaagaaatttagtgacaaggaatggtatgttggaag 917 Query: 181 agcgcagaagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttca 240 ||||||||| ||||| ||||||||||| || ||||| ||||||||||||||||||||||| Sbjct: 918 agcgcagaaaaagtcagaaagggagattgaattgaaagagaagtttgaaaagaaccttca 977 Query: 241 agaggcagcagataagtatcaaaacaccaacttgtatctgaagaacttagatgatactgt 300 ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 978 agaggcagcggataagtatcagaacaccaacttgtatctgaagaacttggatgatactgt 1037 Query: 301 tgatgatgacaagttgcgagaactttttgctgagtttggaactattacttcct 353 ||| ||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 1038 tgacgatgaaaagttgcgtgaactttttgctgagttcggaactattacttcct 1090
>ref|XM_450039.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2314 Score = 359 bits (181), Expect = 4e-96 Identities = 310/353 (87%) Strand = Plus / Plus Query: 1 tgacttgaaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcggga 60 |||||||||||||||||| || || |||||||| || || || | |||||||||||| || Sbjct: 826 tgacttgaaggaaatctttggaaaatttggaaccatcactagcgctgttgtaatgcgtga 885 Query: 61 tggggatggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgc 120 || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 886 gggagatggaagatccaagtgttttggatttgttaactttgaaagtccagatgatgctgc 945 Query: 121 tctggctgttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaag 180 || |||||| ||||| ||||||||||||| ||| ||| ||||||||||| |||||||| Sbjct: 946 tcaggctgtccaagagctgaatggcaagaagtttgatgataaggaatggtatgttggaag 1005 Query: 181 agcgcagaagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttca 240 || || ||||| |||||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 1006 ggcacaaaagaaatcggaaagagagatggaattgaaagagaaatttgagaagaaccttca 1065 Query: 241 agaggcagcagataagtatcaaaacaccaacttgtatctgaagaacttagatgatactgt 300 ||| ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||| ||| Sbjct: 1066 agaagcagcagataagtatcaaaacactaacctgtacctgaagaacttggatgatagtgt 1125 Query: 301 tgatgatgacaagttgcgagaactttttgctgagtttggaactattacttcct 353 ||||||||| |||||| | || ||||||||||||| ||| ||||||||||||| Sbjct: 1126 tgatgatgataagttgagggagctttttgctgagtatggcactattacttcct 1178
>ref|XM_506632.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1310_F05.15 mRNA Length = 2410 Score = 359 bits (181), Expect = 4e-96 Identities = 310/353 (87%) Strand = Plus / Plus Query: 1 tgacttgaaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcggga 60 |||||||||||||||||| || || |||||||| || || || | |||||||||||| || Sbjct: 833 tgacttgaaggaaatctttggaaaatttggaaccatcactagcgctgttgtaatgcgtga 892 Query: 61 tggggatggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgc 120 || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 893 gggagatggaagatccaagtgttttggatttgttaactttgaaagtccagatgatgctgc 952 Query: 121 tctggctgttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaag 180 || |||||| ||||| ||||||||||||| ||| ||| ||||||||||| |||||||| Sbjct: 953 tcaggctgtccaagagctgaatggcaagaagtttgatgataaggaatggtatgttggaag 1012 Query: 181 agcgcagaagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttca 240 || || ||||| |||||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 1013 ggcacaaaagaaatcggaaagagagatggaattgaaagagaaatttgagaagaaccttca 1072 Query: 241 agaggcagcagataagtatcaaaacaccaacttgtatctgaagaacttagatgatactgt 300 ||| ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||| ||| Sbjct: 1073 agaagcagcagataagtatcaaaacactaacctgtacctgaagaacttggatgatagtgt 1132 Query: 301 tgatgatgacaagttgcgagaactttttgctgagtttggaactattacttcct 353 ||||||||| |||||| | || ||||||||||||| ||| ||||||||||||| Sbjct: 1133 tgatgatgataagttgagggagctttttgctgagtatggcactattacttcct 1185
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 359 bits (181), Expect = 4e-96 Identities = 310/353 (87%) Strand = Plus / Minus Query: 1 tgacttgaaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcggga 60 |||||||||||||||||| || || |||||||| || || || | |||||||||||| || Sbjct: 1162867 tgacttgaaggaaatctttggaaaatttggaaccatcactagcgctgttgtaatgcgtga 1162808 Query: 61 tggggatggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgc 120 || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1162807 gggagatggaagatccaagtgttttggatttgttaactttgaaagtccagatgatgctgc 1162748 Query: 121 tctggctgttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaag 180 || |||||| ||||| ||||||||||||| ||| ||| ||||||||||| |||||||| Sbjct: 1162747 tcaggctgtccaagagctgaatggcaagaagtttgatgataaggaatggtatgttggaag 1162688 Query: 181 agcgcagaagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttca 240 || || ||||| |||||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 1162687 ggcacaaaagaaatcggaaagagagatggaattgaaagagaaatttgagaagaaccttca 1162628 Query: 241 agaggcagcagataagtatcaaaacaccaacttgtatctgaagaacttagatgatactgt 300 ||| ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||| ||| Sbjct: 1162627 agaagcagcagataagtatcaaaacactaacctgtacctgaagaacttggatgatagtgt 1162568 Query: 301 tgatgatgacaagttgcgagaactttttgctgagtttggaactattacttcct 353 ||||||||| |||||| | || ||||||||||||| ||| ||||||||||||| Sbjct: 1162567 tgatgatgataagttgagggagctttttgctgagtatggcactattacttcct 1162515
>dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1310_F05 Length = 107916 Score = 359 bits (181), Expect = 4e-96 Identities = 310/353 (87%) Strand = Plus / Minus Query: 1 tgacttgaaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcggga 60 |||||||||||||||||| || || |||||||| || || || | |||||||||||| || Sbjct: 51461 tgacttgaaggaaatctttggaaaatttggaaccatcactagcgctgttgtaatgcgtga 51402 Query: 61 tggggatggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgc 120 || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 51401 gggagatggaagatccaagtgttttggatttgttaactttgaaagtccagatgatgctgc 51342 Query: 121 tctggctgttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaag 180 || |||||| ||||| ||||||||||||| ||| ||| ||||||||||| |||||||| Sbjct: 51341 tcaggctgtccaagagctgaatggcaagaagtttgatgataaggaatggtatgttggaag 51282 Query: 181 agcgcagaagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttca 240 || || ||||| |||||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 51281 ggcacaaaagaaatcggaaagagagatggaattgaaagagaaatttgagaagaaccttca 51222 Query: 241 agaggcagcagataagtatcaaaacaccaacttgtatctgaagaacttagatgatactgt 300 ||| ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||| ||| Sbjct: 51221 agaagcagcagataagtatcaaaacactaacctgtacctgaagaacttggatgatagtgt 51162 Query: 301 tgatgatgacaagttgcgagaactttttgctgagtttggaactattacttcct 353 ||||||||| |||||| | || ||||||||||||| ||| ||||||||||||| Sbjct: 51161 tgatgatgataagttgagggagctttttgctgagtatggcactattacttcct 51109
>dbj|AK101706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060I24, full insert sequence Length = 2410 Score = 359 bits (181), Expect = 4e-96 Identities = 310/353 (87%) Strand = Plus / Plus Query: 1 tgacttgaaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcggga 60 |||||||||||||||||| || || |||||||| || || || | |||||||||||| || Sbjct: 833 tgacttgaaggaaatctttggaaaatttggaaccatcactagcgctgttgtaatgcgtga 892 Query: 61 tggggatggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgc 120 || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 893 gggagatggaagatccaagtgttttggatttgttaactttgaaagtccagatgatgctgc 952 Query: 121 tctggctgttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaag 180 || |||||| ||||| ||||||||||||| ||| ||| ||||||||||| |||||||| Sbjct: 953 tcaggctgtccaagagctgaatggcaagaagtttgatgataaggaatggtatgttggaag 1012 Query: 181 agcgcagaagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttca 240 || || ||||| |||||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 1013 ggcacaaaagaaatcggaaagagagatggaattgaaagagaaatttgagaagaaccttca 1072 Query: 241 agaggcagcagataagtatcaaaacaccaacttgtatctgaagaacttagatgatactgt 300 ||| ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||| ||| Sbjct: 1073 agaagcagcagataagtatcaaaacactaacctgtacctgaagaacttggatgatagtgt 1132 Query: 301 tgatgatgacaagttgcgagaactttttgctgagtttggaactattacttcct 353 ||||||||| |||||| | || ||||||||||||| ||| ||||||||||||| Sbjct: 1133 tgatgatgataagttgagggagctttttgctgagtatggcactattacttcct 1185
>dbj|AK067816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F07, full insert sequence Length = 2314 Score = 359 bits (181), Expect = 4e-96 Identities = 310/353 (87%) Strand = Plus / Plus Query: 1 tgacttgaaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcggga 60 |||||||||||||||||| || || |||||||| || || || | |||||||||||| || Sbjct: 826 tgacttgaaggaaatctttggaaaatttggaaccatcactagcgctgttgtaatgcgtga 885 Query: 61 tggggatggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgc 120 || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 886 gggagatggaagatccaagtgttttggatttgttaactttgaaagtccagatgatgctgc 945 Query: 121 tctggctgttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaag 180 || |||||| ||||| ||||||||||||| ||| ||| ||||||||||| |||||||| Sbjct: 946 tcaggctgtccaagagctgaatggcaagaagtttgatgataaggaatggtatgttggaag 1005 Query: 181 agcgcagaagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttca 240 || || ||||| |||||||| |||||||| ||||| ||||| ||||| ||||||||||| Sbjct: 1006 ggcacaaaagaaatcggaaagagagatggaattgaaagagaaatttgagaagaaccttca 1065 Query: 241 agaggcagcagataagtatcaaaacaccaacttgtatctgaagaacttagatgatactgt 300 ||| ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||| ||| Sbjct: 1066 agaagcagcagataagtatcaaaacactaacctgtacctgaagaacttggatgatagtgt 1125 Query: 301 tgatgatgacaagttgcgagaactttttgctgagtttggaactattacttcct 353 ||||||||| |||||| | || ||||||||||||| ||| ||||||||||||| Sbjct: 1126 tgatgatgataagttgagggagctttttgctgagtatggcactattacttcct 1178
>gb|AY103895.1| Zea mays PCO112590 mRNA sequence Length = 1997 Score = 266 bits (134), Expect = 4e-68 Identities = 278/326 (85%) Strand = Plus / Plus Query: 28 tggaacaataacaagtgttgttgtaatgcgggatggggatggaagatccaagtgttttgg 87 |||||| ||||| |||| |||||| ||||||||| | ||||||| ||||| ||||||||| Sbjct: 424 tggaaccataactagtgctgttgttatgcgggatagcgatggaaaatccaggtgttttgg 483 Query: 88 atttgtgaactttgaaagtccagatgaagctgctctggctgttcaagatttgaatggcaa 147 |||||| || ||||||| | |||||| ||||||| |||||||||||| ||||||||||| Sbjct: 484 atttgtcaattttgaaaatgcagatgctgctgctcaggctgttcaagagttgaatggcaa 543 Query: 148 gaaatttagtgacaaggaatggtacgttggaagagcgcagaagaagtcggaaagggagat 207 || ||| | ||| |||||| ||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 544 gatattcaatgataaggaactgtatgttggaagagcacagaagaagtctgaaagagagat 603 Query: 208 ggagttgaaggagaagtttgaaaagaaccttcaagaggcagcagataagtatcaaaacac 267 ||||||||||||||| ||||||||||| ||||||||| ||| || |||| |||||||| Sbjct: 604 ggagttgaaggagaaatttgaaaagaatgttcaagaggtagctgagaagttccaaaacac 663 Query: 268 caacttgtatctgaagaacttagatgatactgttgatgatgacaagttgcgagaactttt 327 ||||||||| ||||||||||||| || | |||||||||| || ||||| ||||| || Sbjct: 664 aaacttgtatttgaagaacttagaggagaacattgatgatgagaaattgcgtgaactctt 723 Query: 328 tgctgagtttggaactattacttcct 353 |||||||| ||| | ||||||||||| Sbjct: 724 tgctgagtatggcaatattacttcct 749
>dbj|AK058316.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A07, full insert sequence Length = 1482 Score = 256 bits (129), Expect = 4e-65 Identities = 225/257 (87%) Strand = Plus / Plus Query: 97 ctttgaaagtccagatgaagctgctctggctgttcaagatttgaatggcaagaaatttag 156 |||||||||||||||||| ||||||| |||||| ||||| ||||||| ||||| ||| Sbjct: 1 ctttgaaagtccagatgatgctgctcaggctgtccaagagctgaatggtaagaagtttga 60 Query: 157 tgacaaggaatggtacgttggaagagcgcagaagaagtcggaaagggagatggagttgaa 216 ||| ||||||||||| |||||||| || || ||||| |||||||| |||||||| ||||| Sbjct: 61 tgataaggaatggtatgttggaagggcacaaaagaaatcggaaagagagatggaattgaa 120 Query: 217 ggagaagtttgaaaagaaccttcaagaggcagcagataagtatcaaaacaccaacttgta 276 ||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||| |||| Sbjct: 121 agagaaatttgagaagaaccttcaagaagcagcagataagtatcaaaacactaacctgta 180 Query: 277 tctgaagaacttagatgatactgttgatgatgacaagttgcgagaactttttgctgagtt 336 ||||||||||| ||||||| |||||||||||| |||||| | || ||||||||||||| Sbjct: 181 cctgaagaacttggatgatagtgttgatgatgataagttgagggagctttttgctgagta 240 Query: 337 tggaactattacttcct 353 ||| ||||||||||||| Sbjct: 241 tggcactattacttcct 257
>gb|AF153689.1|AF153689 Oryza sativa poly(A)-binding protein gene, partial cds Length = 552 Score = 218 bits (110), Expect = 9e-54 Identities = 200/230 (86%) Strand = Plus / Plus Query: 124 ggctgttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaagagc 183 |||||| ||||| ||||||||||||| ||| ||| ||||||||||| |||||||| || Sbjct: 5 ggctgtccaagagctgaatggcaagaagtttgatgataaggaatggtatgttggaagggc 64 Query: 184 gcagaagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttcaaga 243 || ||||| |||| ||| |||||||| ||||| ||||| ||||| |||||||||||||| Sbjct: 65 acaaaagaaatcgggaagagagatggaattgaaagagaaatttgagaagaaccttcaaga 124 Query: 244 ggcagcagataagtatcaaaacaccaacttgtatctgaagaacttagatgatactgttga 303 ||||||||||||||||||||||| ||| |||| ||||||||||| ||||||| |||||| Sbjct: 125 agcagcagataagtatcaaaacactaacctgtacctgaagaacttggatgatagtgttga 184 Query: 304 tgatgacaagttgcgagaactttttgctgagtttggaactattacttcct 353 |||||| |||||| | || ||||||||||||| ||| ||||||||||||| Sbjct: 185 tgatgataagttgagggagctttttgctgagtatggcactattacttcct 234
>ref|XM_481529.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1983 Score = 176 bits (89), Expect = 3e-41 Identities = 209/249 (83%) Strand = Plus / Plus Query: 8 aaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcgggatggggat 67 |||||||| || || || |||||| | ||||| ||||| ||||||||||| || || ||| Sbjct: 703 aaggaaatttttggtaaatttggacccataactagtgtcgttgtaatgcgtgaaggtgat 762 Query: 68 ggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgctctggct 127 || | ||| | || ||||||||||| |||||||||| ||||||||| ||||||| ||| Sbjct: 763 gggaaatctagatgctttggatttgttaactttgaaaatccagatgatgctgctcgagct 822 Query: 128 gttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaagagcgcag 187 ||| ||||||||||||||||||| ||| ||||||||||||||| ||| | ||||| ||| Sbjct: 823 gttgaagatttgaatggcaagaagtttgatgacaaggaatggtatgtttgtagagcacag 882 Query: 188 aagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttcaagaggca 247 |||||||| || ||||||||||| ||||| || || ||||| |||||| | |||||||| Sbjct: 883 aagaagtcagagagggagatggaattgaaagaaaaatttgagaagaacatcaaagaggca 942 Query: 248 gcagataag 256 ||||||||| Sbjct: 943 gcagataag 951
>gb|AY360385.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0095C12, complete sequence Length = 146632 Score = 176 bits (89), Expect = 3e-41 Identities = 209/249 (83%) Strand = Plus / Plus Query: 8 aaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcgggatggggat 67 |||||||| || || || |||||| | ||||| ||||| ||||||||||| || || ||| Sbjct: 53853 aaggaaatttttggtaaatttggacccataactagtgtcgttgtaatgcgtgaaggtgat 53912 Query: 68 ggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgctctggct 127 || | ||| | || ||||||||||| |||||||||| ||||||||| ||||||| ||| Sbjct: 53913 gggaaatctagatgctttggatttgttaactttgaaaatccagatgatgctgctcgagct 53972 Query: 128 gttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaagagcgcag 187 ||| ||||||||||||||||||| ||| ||||||||||||||| ||| | ||||| ||| Sbjct: 53973 gttgaagatttgaatggcaagaagtttgatgacaaggaatggtatgtttgtagagcacag 54032 Query: 188 aagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttcaagaggca 247 |||||||| || ||||||||||| ||||| || || ||||| |||||| | |||||||| Sbjct: 54033 aagaagtcagagagggagatggaattgaaagaaaaatttgagaagaacatcaaagaggca 54092 Query: 248 gcagataag 256 ||||||||| Sbjct: 54093 gcagataag 54101
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 176 bits (89), Expect = 3e-41 Identities = 209/249 (83%) Strand = Plus / Plus Query: 8 aaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcgggatggggat 67 |||||||| || || || |||||| | ||||| ||||| ||||||||||| || || ||| Sbjct: 13466226 aaggaaatttttggtaaatttggacccataactagtgtcgttgtaatgcgtgaaggtgat 13466285 Query: 68 ggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgctctggct 127 || | ||| | || ||||||||||| |||||||||| ||||||||| ||||||| ||| Sbjct: 13466286 gggaaatctagatgctttggatttgttaactttgaaaatccagatgatgctgctcgagct 13466345 Query: 128 gttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaagagcgcag 187 ||| ||||||||||||||||||| ||| ||||||||||||||| ||| | ||||| ||| Sbjct: 13466346 gttgaagatttgaatggcaagaagtttgatgacaaggaatggtatgtttgtagagcacag 13466405 Query: 188 aagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttcaagaggca 247 |||||||| || ||||||||||| ||||| || || ||||| |||||| | |||||||| Sbjct: 13466406 aagaagtcagagagggagatggaattgaaagaaaaatttgagaagaacatcaaagaggca 13466465 Query: 248 gcagataag 256 ||||||||| Sbjct: 13466466 gcagataag 13466474
>dbj|AP005500.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451H06 Length = 136473 Score = 176 bits (89), Expect = 3e-41 Identities = 209/249 (83%) Strand = Plus / Plus Query: 8 aaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcgggatggggat 67 |||||||| || || || |||||| | ||||| ||||| ||||||||||| || || ||| Sbjct: 4540 aaggaaatttttggtaaatttggacccataactagtgtcgttgtaatgcgtgaaggtgat 4599 Query: 68 ggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgctctggct 127 || | ||| | || ||||||||||| |||||||||| ||||||||| ||||||| ||| Sbjct: 4600 gggaaatctagatgctttggatttgttaactttgaaaatccagatgatgctgctcgagct 4659 Query: 128 gttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaagagcgcag 187 ||| ||||||||||||||||||| ||| ||||||||||||||| ||| | ||||| ||| Sbjct: 4660 gttgaagatttgaatggcaagaagtttgatgacaaggaatggtatgtttgtagagcacag 4719 Query: 188 aagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttcaagaggca 247 |||||||| || ||||||||||| ||||| || || ||||| |||||| | |||||||| Sbjct: 4720 aagaagtcagagagggagatggaattgaaagaaaaatttgagaagaacatcaaagaggca 4779 Query: 248 gcagataag 256 ||||||||| Sbjct: 4780 gcagataag 4788
>dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1120_B07 Length = 118763 Score = 176 bits (89), Expect = 3e-41 Identities = 209/249 (83%) Strand = Plus / Plus Query: 8 aaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcgggatggggat 67 |||||||| || || || |||||| | ||||| ||||| ||||||||||| || || ||| Sbjct: 102953 aaggaaatttttggtaaatttggacccataactagtgtcgttgtaatgcgtgaaggtgat 103012 Query: 68 ggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgctctggct 127 || | ||| | || ||||||||||| |||||||||| ||||||||| ||||||| ||| Sbjct: 103013 gggaaatctagatgctttggatttgttaactttgaaaatccagatgatgctgctcgagct 103072 Query: 128 gttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaagagcgcag 187 ||| ||||||||||||||||||| ||| ||||||||||||||| ||| | ||||| ||| Sbjct: 103073 gttgaagatttgaatggcaagaagtttgatgacaaggaatggtatgtttgtagagcacag 103132 Query: 188 aagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttcaagaggca 247 |||||||| || ||||||||||| ||||| || || ||||| |||||| | |||||||| Sbjct: 103133 aagaagtcagagagggagatggaattgaaagaaaaatttgagaagaacatcaaagaggca 103192 Query: 248 gcagataag 256 ||||||||| Sbjct: 103193 gcagataag 103201
>dbj|AK098867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A12, full insert sequence Length = 2412 Score = 176 bits (89), Expect = 3e-41 Identities = 209/249 (83%) Strand = Plus / Plus Query: 8 aaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcgggatggggat 67 |||||||| || || || |||||| | ||||| ||||| ||||||||||| || || ||| Sbjct: 870 aaggaaatttttggtaaatttggacccataactagtgtcgttgtaatgcgtgaaggtgat 929 Query: 68 ggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgctctggct 127 || | ||| | || ||||||||||| |||||||||| ||||||||| ||||||| ||| Sbjct: 930 gggaaatctagatgctttggatttgttaactttgaaaatccagatgatgctgctcgagct 989 Query: 128 gttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaagagcgcag 187 ||| ||||||||||||||||||| ||| ||||||||||||||| ||| | ||||| ||| Sbjct: 990 gttgaagatttgaatggcaagaagtttgatgacaaggaatggtatgtttgtagagcacag 1049 Query: 188 aagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttcaagaggca 247 |||||||| || ||||||||||| ||||| || || ||||| |||||| | |||||||| Sbjct: 1050 aagaagtcagagagggagatggaattgaaagaaaaatttgagaagaacatcaaagaggca 1109 Query: 248 gcagataag 256 ||||||||| Sbjct: 1110 gcagataag 1118
>dbj|AK065167.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C13, full insert sequence Length = 2387 Score = 176 bits (89), Expect = 3e-41 Identities = 209/249 (83%) Strand = Plus / Plus Query: 8 aaggaaatcttcgggaagtttggaacaataacaagtgttgttgtaatgcgggatggggat 67 |||||||| || || || |||||| | ||||| ||||| ||||||||||| || || ||| Sbjct: 900 aaggaaatttttggtaaatttggacccataactagtgtcgttgtaatgcgtgaaggtgat 959 Query: 68 ggaagatccaagtgttttggatttgtgaactttgaaagtccagatgaagctgctctggct 127 || | ||| | || ||||||||||| |||||||||| ||||||||| ||||||| ||| Sbjct: 960 gggaaatctagatgctttggatttgttaactttgaaaatccagatgatgctgctcgagct 1019 Query: 128 gttcaagatttgaatggcaagaaatttagtgacaaggaatggtacgttggaagagcgcag 187 ||| ||||||||||||||||||| ||| ||||||||||||||| ||| | ||||| ||| Sbjct: 1020 gttgaagatttgaatggcaagaagtttgatgacaaggaatggtatgtttgtagagcacag 1079 Query: 188 aagaagtcggaaagggagatggagttgaaggagaagtttgaaaagaaccttcaagaggca 247 |||||||| || ||||||||||| ||||| || || ||||| |||||| | |||||||| Sbjct: 1080 aagaagtcagagagggagatggaattgaaagaaaaatttgagaagaacatcaaagaggca 1139 Query: 248 gcagataag 256 ||||||||| Sbjct: 1140 gcagataag 1148
>dbj|AK099783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096A14, full insert sequence Length = 1416 Score = 163 bits (82), Expect = 5e-37 Identities = 151/174 (86%) Strand = Plus / Plus Query: 83 tttggatttgtgaactttgaaagtccagatgaagctgctctggctgttcaagatttgaat 142 ||||||||||| |||||||||| ||||||||| ||||||| |||||| ||||||||||| Sbjct: 3 tttggatttgttaactttgaaaatccagatgatgctgctcgagctgttgaagatttgaat 62 Query: 143 ggcaagaaatttagtgacaaggaatggtacgttggaagagcgcagaagaagtcggaaagg 202 |||||||| ||| ||||||||||||||| ||| | ||||| ||||||||||| || ||| Sbjct: 63 ggcaagaagtttgatgacaaggaatggtatgtttgtagagcacagaagaagtcagagagg 122 Query: 203 gagatggagttgaaggagaagtttgaaaagaaccttcaagaggcagcagataag 256 |||||||| ||||| || || ||||| |||||| | ||||||||||||||||| Sbjct: 123 gagatggaattgaaagaaaaatttgagaagaacatcaaagaggcagcagataag 176
>gb|BT009274.1| Triticum aestivum clone wlk8.pk0015.b12:fis, full insert mRNA sequence Length = 2056 Score = 115 bits (58), Expect = 1e-22 Identities = 219/272 (80%), Gaps = 3/272 (1%) Strand = Plus / Plus Query: 83 tttggatttgtgaactttgaaagtccagatgaagctgctctggctgttcaagatttgaat 142 |||||||| ||||||||||||| ||| ||||| ||||| |||||| | ||||||||| Sbjct: 689 tttggattcgtgaactttgaaaatccggatgatgctgcatgtgctgttgaggatttgaat 748 Query: 143 ggcaagaaatttagtgacaaggaatggtacgttggaagagcgcagaagaagtcggaaagg 202 |||||||||||| ||| ||||||| ||| ||||| ||||| || |||||||| |||||| Sbjct: 749 ggcaagaaatttgatgataaggaattgtatgttggtagagcccaaaagaagtctgaaagg 808 Query: 203 gagatggagttgaaggagaagtttgaaaagaaccttcaagaggcagcagataagtatcaa 262 |||||| | |||||||| || ||||| || | | | ||||| |||| || | | | ||| Sbjct: 809 gagatgcaattgaaggaaaattttgagaaaagcaataaagagacagctgacaggaaccaa 868 Query: 263 aacaccaacttgtatctgaagaacttagatgatactgttgat---gatgacaagttgcga 319 ||| ||||||||| |||| ||||| |||| || ||||||| ||||| ||||| | Sbjct: 869 ggcactaacttgtatttgaaaaacttggatggtagtgttgatgacgatgagaagttaaaa 928 Query: 320 gaactttttgctgagtttggaactattacttc 351 |||||||||||||| ||||| ||||| ||||| Sbjct: 929 gaactttttgctgaatttggcactataacttc 960
>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence Length = 112369 Score = 95.6 bits (48), Expect = 9e-17 Identities = 147/180 (81%) Strand = Plus / Plus Query: 26 tttggaacaataacaagtgttgttgtaatgcgggatggggatggaagatccaagtgtttt 85 ||||||||||| || |||| ||| |||||| ||||||||||||| | ||| ||||| ||| Sbjct: 57365 tttggaacaattaccagtgctgtagtaatgagggatggggatgggaaatcaaagtgcttt 57424 Query: 86 ggatttgtgaactttgaaagtccagatgaagctgctctggctgttcaagatttgaatggc 145 ||||||||||||||||| ||| | ||||| |||||| |||||| | | | | ||||| Sbjct: 57425 ggatttgtgaactttgagagtaccgatgatgctgctagagctgttgaggctcttaatggg 57484 Query: 146 aagaaatttagtgacaaggaatggtacgttggaagagcgcagaagaagtcggaaagggag 205 || ||| || ||||||||||||||| ||||||| ||| || || || || ||||||||| Sbjct: 57485 aaaaaaattgatgacaaggaatggtatgttggaaaagctcaaaaaaaatctgaaagggag 57544
>gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete sequence Length = 141776 Score = 95.6 bits (48), Expect = 9e-17 Identities = 147/180 (81%) Strand = Plus / Plus Query: 26 tttggaacaataacaagtgttgttgtaatgcgggatggggatggaagatccaagtgtttt 85 ||||||||||| || |||| ||| |||||| ||||||||||||| | ||| ||||| ||| Sbjct: 394 tttggaacaattaccagtgctgtagtaatgagggatggggatgggaaatcaaagtgcttt 453 Query: 86 ggatttgtgaactttgaaagtccagatgaagctgctctggctgttcaagatttgaatggc 145 ||||||||||||||||| ||| | ||||| |||||| |||||| | | | | ||||| Sbjct: 454 ggatttgtgaactttgagagtaccgatgatgctgctagagctgttgaggctcttaatggg 513 Query: 146 aagaaatttagtgacaaggaatggtacgttggaagagcgcagaagaagtcggaaagggag 205 || ||| || ||||||||||||||| ||||||| ||| || || || || ||||||||| Sbjct: 514 aaaaaaattgatgacaaggaatggtatgttggaaaagctcaaaaaaaatctgaaagggag 573
>ref|XM_473087.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1980 Score = 77.8 bits (39), Expect = 2e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 107 ccagatgaagctgctctggctgttcaagatttgaatggcaagaaatttagtgacaaggaa 166 |||||||| ||||||| |||||| | || | ||||| |||||| ||| |||||| ||| Sbjct: 802 ccagatgatgctgctcgtgctgttgaggaacttaatggaaagaaaattaatgacaaagaa 861 Query: 167 tggtacgttggaagagcgcagaagaagtcggaaagggagatggagttgaag 217 ||||| ||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 862 tggtatgttggaagagctcagaagaagtcagaaagagagattgaattgaag 912
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 77.8 bits (39), Expect = 2e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 107 ccagatgaagctgctctggctgttcaagatttgaatggcaagaaatttagtgacaaggaa 166 |||||||| ||||||| |||||| | || | ||||| |||||| ||| |||||| ||| Sbjct: 55370 ccagatgatgctgctcgtgctgttgaggaacttaatggaaagaaaattaatgacaaagaa 55311 Query: 167 tggtacgttggaagagcgcagaagaagtcggaaagggagatggagttgaag 217 ||||| ||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 55310 tggtatgttggaagagctcagaagaagtcagaaagagagattgaattgaag 55260
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 77.8 bits (39), Expect = 2e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 107 ccagatgaagctgctctggctgttcaagatttgaatggcaagaaatttagtgacaaggaa 166 |||||||| ||||||| |||||| | || | ||||| |||||| ||| |||||| ||| Sbjct: 25173703 ccagatgatgctgctcgtgctgttgaggaacttaatggaaagaaaattaatgacaaagaa 25173644 Query: 167 tggtacgttggaagagcgcagaagaagtcggaaagggagatggagttgaag 217 ||||| ||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 25173643 tggtatgttggaagagctcagaagaagtcagaaagagagattgaattgaag 25173593
>dbj|AK067210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096J03, full insert sequence Length = 2549 Score = 77.8 bits (39), Expect = 2e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 107 ccagatgaagctgctctggctgttcaagatttgaatggcaagaaatttagtgacaaggaa 166 |||||||| ||||||| |||||| | || | ||||| |||||| ||| |||||| ||| Sbjct: 1082 ccagatgatgctgctcgtgctgttgaggaacttaatggaaagaaaattaatgacaaagaa 1141 Query: 167 tggtacgttggaagagcgcagaagaagtcggaaagggagatggagttgaag 217 ||||| ||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 1142 tggtatgttggaagagctcagaagaagtcagaaagagagattgaattgaag 1192
>dbj|AK064269.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-E03, full insert sequence Length = 1496 Score = 77.8 bits (39), Expect = 2e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 107 ccagatgaagctgctctggctgttcaagatttgaatggcaagaaatttagtgacaaggaa 166 |||||||| ||||||| |||||| | || | ||||| |||||| ||| |||||| ||| Sbjct: 630 ccagatgatgctgctcgtgctgttgaggaacttaatggaaagaaaattaatgacaaagaa 571 Query: 167 tggtacgttggaagagcgcagaagaagtcggaaagggagatggagttgaag 217 ||||| ||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 570 tggtatgttggaagagctcagaagaagtcagaaagagagattgaattgaag 520
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 77.8 bits (39), Expect = 2e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 107 ccagatgaagctgctctggctgttcaagatttgaatggcaagaaatttagtgacaaggaa 166 |||||||| ||||||| |||||| | || | ||||| |||||| ||| |||||| ||| Sbjct: 121130 ccagatgatgctgctcgtgctgttgaggaacttaatggaaagaaaattaatgacaaagaa 121071 Query: 167 tggtacgttggaagagcgcagaagaagtcggaaagggagatggagttgaag 217 ||||| ||||||||||| ||||||||||| ||||| ||||| || |||||| Sbjct: 121070 tggtatgttggaagagctcagaagaagtcagaaagagagattgaattgaag 121020
>dbj|AK058314.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A04, full insert sequence Length = 1208 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 290 gatgatactgttgatgatgacaagttgcgagaactttttgctgagtttggaactattact 349 ||||||| |||||||||||| |||||| | || ||||||||||||| ||| ||||||||| Sbjct: 4 gatgatagtgttgatgatgataagttgagggagctttttgctgagtatggcactattact 63 Query: 350 tcct 353 |||| Sbjct: 64 tcct 67
>gb|AY103944.1| Zea mays PCO133356 mRNA sequence Length = 2499 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 157 tgacaaggaatggtacgttggaagagcgcagaagaagtcggaaagggagatgga 210 |||||| || ||||| ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1054 tgacaaagagtggtatgttggaagagctcagaagaagtcagaaagagagatgga 1107
>gb|AY030359.1| Anemia phyllitidis polyadenylated mRNA-binding protein 2 (Pab2) mRNA, partial cds Length = 1609 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 157 tgacaaggaatggtacgttggaagagcgcagaagaagtcggaaaggga 204 |||||| |||||||| || || |||||||||||||| ||||||||||| Sbjct: 288 tgacaaagaatggtatgtaggcagagcgcagaagaaatcggaaaggga 335
>gb|AF349964.1| Daucus carota poly(A)-binding protein mRNA, complete cds Length = 2491 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 28 tggaacaataacaagtgttgttgtaatgcgggatggggatggaagatccaagtgttttgg 87 ||||||||| || ||||| || |||||| | |||| ||||||| ||| ||||||||||| Sbjct: 939 tggaacaattaccagtgtagtagtaatgagagatgcagatggaaaatcaaagtgttttgg 998 Query: 88 atttgtgaactttga 102 ||||| |||||||| Sbjct: 999 ctttgtcaactttga 1013
>ref|NM_127899.2| Arabidopsis thaliana PAB4; RNA binding / translation initiation factor AT2G23350 (PAB4) mRNA, complete cds Length = 2371 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 57 gggatggggatggaagatccaagtgttttggatttgtgaactttga 102 ||||||| ||||| | ||||| ||||||||||||||| |||||||| Sbjct: 929 gggatggagatgggaaatccaggtgttttggatttgtcaactttga 974
>gb|AY079389.1| Arabidopsis thaliana putative poly(A) binding protein (At2g23350) mRNA, complete cds Length = 2020 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 57 gggatggggatggaagatccaagtgttttggatttgtgaactttga 102 ||||||| ||||| | ||||| ||||||||||||||| |||||||| Sbjct: 773 gggatggagatgggaaatccaggtgttttggatttgtcaactttga 818
>gb|AY050859.1| Arabidopsis thaliana putative poly(A) binding protein (At2g23350) mRNA, complete cds Length = 2337 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 57 gggatggggatggaagatccaagtgttttggatttgtgaactttga 102 ||||||| ||||| | ||||| ||||||||||||||| |||||||| Sbjct: 927 gggatggagatgggaaatccaggtgttttggatttgtcaactttga 972
>gb|AF360217.1| Arabidopsis thaliana putative poly(A) binding protein (At2g23350) mRNA, complete cds Length = 2385 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 57 gggatggggatggaagatccaagtgttttggatttgtgaactttga 102 ||||||| ||||| | ||||| ||||||||||||||| |||||||| Sbjct: 926 gggatggagatgggaaatccaggtgttttggatttgtcaactttga 971
>gb|AC002391.3| Arabidopsis thaliana chromosome 2 clone T20D16 map CIC06C07, complete sequence Length = 108881 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 57 gggatggggatggaagatccaagtgttttggatttgtgaactttga 102 ||||||| ||||| | ||||| ||||||||||||||| |||||||| Sbjct: 7160 gggatggagatgggaaatccaggtgttttggatttgtcaactttga 7115
>ref|NM_214775.1| Danio rerio ataxin 2-binding protein 1-like (a2bp1l), mRNA Length = 1149 Score = 46.1 bits (23), Expect = 0.076 Identities = 32/35 (91%) Strand = Plus / Plus Query: 72 gatccaagtgttttggatttgtgaactttgaaagt 106 |||||||| ||||||||||||||| ||||||||| Sbjct: 551 gatccaagggttttggatttgtgacgtttgaaagt 585
>dbj|AB074763.1| Danio rerio fox-1 mRNA for RNA-binding protein, complete cds Length = 1149 Score = 46.1 bits (23), Expect = 0.076 Identities = 32/35 (91%) Strand = Plus / Plus Query: 72 gatccaagtgttttggatttgtgaactttgaaagt 106 |||||||| ||||||||||||||| ||||||||| Sbjct: 551 gatccaagggttttggatttgtgacgtttgaaagt 585
>gb|AF190655.1|AF190655 Nicotiana tabacum poly(A)-binding protein (PABP) mRNA, complete cds Length = 2364 Score = 44.1 bits (22), Expect = 0.30 Identities = 34/38 (89%) Strand = Plus / Plus Query: 65 gatggaagatccaagtgttttggatttgtgaactttga 102 ||||||| ||||| ||| ||||||||||| |||||||| Sbjct: 864 gatggaaaatccaggtgctttggatttgtcaactttga 901
>ref|NM_180361.1| Arabidopsis thaliana CP29; RNA binding AT3G53460 (CP29) transcript variant AT3G53460.2 mRNA, complete cds Length = 1157 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 agatccaagtgttttggatttgtga 95 ||||||||| ||||||||||||||| Sbjct: 944 agatccaagggttttggatttgtga 968
>ref|NM_115206.2| Arabidopsis thaliana CP29; RNA binding AT3G53460 (CP29) transcript variant AT3G53460.1 mRNA, complete cds Length = 1548 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 agatccaagtgttttggatttgtga 95 ||||||||| ||||||||||||||| Sbjct: 968 agatccaagggttttggatttgtga 992
>ref|XM_638964.1| Dictyostelium discoideum hypothetical protein (DDB0167766), partial mRNA Length = 3423 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 288 tagatgatactgttgatgatg 308 ||||||||||||||||||||| Sbjct: 2431 tagatgatactgttgatgatg 2411
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 143 ggcaagaaatttagtgacaaggaat 167 |||||||||||| |||||||||||| Sbjct: 307150 ggcaagaaatttcgtgacaaggaat 307174
>gb|AC183388.3| Pan troglodytes BAC clone CH251-53D20 from chromosome 16, complete sequence Length = 161327 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 ttgaatggcaagaaatttagtgaca 161 ||||||||||||||||||| ||||| Sbjct: 2812 ttgaatggcaagaaatttaatgaca 2836
>gb|AC002288.1|HUAC002288 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-249B10, complete sequence Length = 213633 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 ttgaatggcaagaaatttagtgaca 161 ||||||||||||||||||| ||||| Sbjct: 36725 ttgaatggcaagaaatttaatgaca 36749
>gb|AC130451.2| Homo sapiens chromosome 16 clone CTA-249B10, complete sequence Length = 215866 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 137 ttgaatggcaagaaatttagtgaca 161 ||||||||||||||||||| ||||| Sbjct: 179136 ttgaatggcaagaaatttaatgaca 179112
>gb|AC131659.2| Mus musculus BAC clone RP23-241H7 from 3, complete sequence Length = 171521 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 196 ggaaagggagatggagttgaaggag 220 ||||||||||||||| ||||||||| Sbjct: 133461 ggaaagggagatggatttgaaggag 133485
>gb|AC148486.17| Medicago truncatula clone mth2-56d23, complete sequence Length = 121459 Score = 42.1 bits (21), Expect = 1.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 77 aagtgttttggatttgtgaactttgaaagtccagatgaagctgct 121 ||||||||||||||||| || ||||||| | |||| || |||||| Sbjct: 85742 aagtgttttggatttgtcaattttgaaaatgcagaagatgctgct 85698
>emb|AL844222.19| Mouse DNA sequence from clone RP23-44P13 on chromosome 4, complete sequence Length = 238429 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 aaggagaagtttgaaaagaac 235 ||||||||||||||||||||| Sbjct: 114685 aaggagaagtttgaaaagaac 114705
>emb|AL645855.25| Mouse DNA sequence from clone RP23-122N23 on chromosome 11 Contains a novel gene, complete sequence Length = 203914 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 211 gttgaaggagaagtttgaaaagaac 235 ||||||||||||||| ||||||||| Sbjct: 130478 gttgaaggagaagttagaaaagaac 130502
>gb|AY077674.1| Arabidopsis thaliana AT3g53460/F4P12_160 mRNA, complete cds Length = 1029 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 agatccaagtgttttggatttgtga 95 ||||||||| ||||||||||||||| Sbjct: 886 agatccaagggttttggatttgtga 910
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 tacgttggaagagcgcagaagaagt 194 |||||||||||||| |||||||||| Sbjct: 979524 tacgttggaagagcacagaagaagt 979500
>gb|AY039909.1| Arabidopsis thaliana AT3g53460/F4P12_160 mRNA, complete cds Length = 1549 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 agatccaagtgttttggatttgtga 95 ||||||||| ||||||||||||||| Sbjct: 982 agatccaagggttttggatttgtga 1006
>emb|BX823854.1|CNS0A6O5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS83ZG08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1450 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 agatccaagtgttttggatttgtga 95 ||||||||| ||||||||||||||| Sbjct: 955 agatccaagggttttggatttgtga 979
>emb|BX823838.1|CNS0A6NK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS81ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1477 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 agatccaagtgttttggatttgtga 95 ||||||||| ||||||||||||||| Sbjct: 934 agatccaagggttttggatttgtga 958
>emb|BX823223.1|CNS0A6II Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS12ZF07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1427 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 agatccaagtgttttggatttgtga 95 ||||||||| ||||||||||||||| Sbjct: 953 agatccaagggttttggatttgtga 977
>gb|AC117070.2| Dictyostelium discoideum chromosome 2 map 2097701-2233941 strain AX4, complete sequence Length = 136240 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 tagatgatactgttgatgatg 308 ||||||||||||||||||||| Sbjct: 20005 tagatgatactgttgatgatg 20025
>gb|AY087840.1| Arabidopsis thaliana clone 38888 mRNA, complete sequence Length = 1496 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 agatccaagtgttttggatttgtga 95 ||||||||| ||||||||||||||| Sbjct: 968 agatccaagggttttggatttgtga 992
>gb|AF265340.1|AF265340 Homo sapiens chromosome 16 clone BAC 504N19, complete sequence Length = 180348 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 ttgaatggcaagaaatttagtgaca 161 ||||||||||||||||||| ||||| Sbjct: 143868 ttgaatggcaagaaatttaatgaca 143892
>dbj|D31711.1|ATHCP29B Arabidopsis thaliana mRNA for chloroplast RNA-binding protein cp29, partial cds Length = 1051 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 agatccaagtgttttggatttgtga 95 ||||||||| ||||||||||||||| Sbjct: 838 agatccaagggttttggatttgtga 862
>dbj|D31710.1|ATHCP29A Arabidopsis thaliana gene for chloroplast RNA-binding protein cp29, complete cds (exon1, exon2, exon3, exon4) Length = 4032 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 agatccaagtgttttggatttgtga 95 ||||||||| ||||||||||||||| Sbjct: 1949 agatccaagggttttggatttgtga 1973
>ref|NM_211850.1| Eremothecium gossypii AGR122Cp (AGR122C), mRNA Length = 1758 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 tacgttggaagagcgcagaagaagt 194 |||||||||||||| |||||||||| Sbjct: 868 tacgttggaagagcacagaagaagt 892
>emb|CR962131.2| Medicago truncatula chromosome 5 clone mth2-69b10, COMPLETE SEQUENCE Length = 115407 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ggaacaataacaagtgttgtt 49 ||||||||||||||||||||| Sbjct: 78393 ggaacaataacaagtgttgtt 78413
>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12 Length = 144628 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 71 agatccaagtgttttggatttgtga 95 ||||||||| ||||||||||||||| Sbjct: 60650 agatccaagggttttggatttgtga 60626
>gb|AC171207.2| Mus musculus BAC clone RP23-339A3 from chromosome 3, complete sequence Length = 190395 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 196 ggaaagggagatggagttgaaggag 220 ||||||||||||||| ||||||||| Sbjct: 101275 ggaaagggagatggatttgaaggag 101299
>ref|NM_129278.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT2G37220 mRNA, complete cds Length = 1297 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 gatccaagtgttttggatttgtga 95 |||||||| ||||||||||||||| Sbjct: 788 gatccaagggttttggatttgtga 811
>ref|NM_127110.1| Arabidopsis thaliana unknown protein AT2G15500 mRNA, complete cds Length = 399 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 179 agagcgcagaagaagtcggaaagggagatgga 210 ||||| ||||||||||| |||||||| ||||| Sbjct: 139 agagctcagaagaagtctgaaagggaaatgga 170
>ref|NM_119572.3| Arabidopsis thaliana PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding AT4G34110 (PAB2) mRNA, complete cds Length = 2440 Score = 40.1 bits (20), Expect = 4.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 161 aaggaatggtacgttggaagagcgcagaagaagtcggaaaggga 204 ||||| ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 1191 aaggagtggtatgttggtagagcccagaagaagtcagagaggga 1234
>ref|XM_635095.1| Dictyostelium discoideum hypothetical protein (DDB0218401), partial mRNA Length = 9243 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gatgatactgttgatgatga 309 |||||||||||||||||||| Sbjct: 5441 gatgatactgttgatgatga 5422
>ref|XM_416881.1| PREDICTED: Gallus gallus similar to Potential phospholipid-transporting ATPase VA (P-locus fat-associated ATPase) (LOC418685), mRNA Length = 5907 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 agtccagatgaagctgctct 123 |||||||||||||||||||| Sbjct: 3235 agtccagatgaagctgctct 3254
>gb|CP000119.1| Anabaena variabilis ATCC 29413 plasmid A, complete sequence Length = 366354 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ttgtaatgcgggatggggat 67 |||||||||||||||||||| Sbjct: 340137 ttgtaatgcgggatggggat 340118
>gb|AC172242.3| Gallus gallus BAC clone CH261-162M6 from chromosome ul, complete sequence Length = 252782 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 237 ttcaagaggcagcagataagtatcaaaa 264 |||||||||||| || |||||||||||| Sbjct: 231175 ttcaagaggcagaagctaagtatcaaaa 231148
>gb|AC125538.4| Mus musculus BAC clone RP24-178B2 from chromosome 15, complete sequence Length = 169576 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gaagatccaagtgttttgga 88 |||||||||||||||||||| Sbjct: 146203 gaagatccaagtgttttgga 146184
>gb|AC114822.7| Mus musculus BAC clone RP23-113A12 from 2, complete sequence Length = 209762 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 aagggagatggagttgaagg 218 |||||||||||||||||||| Sbjct: 88927 aagggagatggagttgaagg 88946
>gb|AC130800.23| Medicago truncatula clone mth2-36b7, complete sequence Length = 133868 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tgttttggatttgtgaactt 99 |||||||||||||||||||| Sbjct: 97932 tgttttggatttgtgaactt 97913
>gb|AC122728.32| Medicago truncatula clone mth2-22l4, complete sequence Length = 102937 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 269 aacttgtatctgaagaacttagatgata 296 ||||||||||| |||||||| ||||||| Sbjct: 30154 aacttgtatctcaagaacttggatgata 30127
>emb|AL354983.9| Human DNA sequence from clone RP11-108F13 on chromosome 1 Contains the 3' end of a novel gene (KIAA0133), a novel pseudogene and a high-mobility group box 1 (HMGB1) pseudogene, complete sequence Length = 77331 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tggaacaataacaagtgttg 47 |||||||||||||||||||| Sbjct: 48127 tggaacaataacaagtgttg 48146
>gb|AY038863.1|AY038861S03 Mus musculus protein tyrosine phosphatase receptor-like protein J (Ptprj) gene, intron 1 Length = 8929 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 106 tccagatgaagctgctctggctgt 129 |||||| ||||||||||||||||| Sbjct: 7208 tccagaggaagctgctctggctgt 7231
>gb|AY080718.1| Arabidopsis thaliana putative poly(A)-binding protein (At4g34110) mRNA, partial cds Length = 2033 Score = 40.1 bits (20), Expect = 4.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 161 aaggaatggtacgttggaagagcgcagaagaagtcggaaaggga 204 ||||| ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 799 aaggagtggtatgttggtagagcccagaagaagtcagagaggga 842
>gb|AY059129.1| Arabidopsis thaliana putative RNA-binding protein (At2g37220) mRNA, complete cds Length = 901 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 gatccaagtgttttggatttgtga 95 |||||||| ||||||||||||||| Sbjct: 728 gatccaagggttttggatttgtga 751
>gb|AF370167.1| Arabidopsis thaliana putative RNA-binding protein (At2g37220) mRNA, complete cds Length = 1245 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 gatccaagtgttttggatttgtga 95 |||||||| ||||||||||||||| Sbjct: 788 gatccaagggttttggatttgtga 811
>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80 Length = 192861 Score = 40.1 bits (20), Expect = 4.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 161 aaggaatggtacgttggaagagcgcagaagaagtcggaaaggga 204 ||||| ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 171555 aaggagtggtatgttggtagagcccagaagaagtcagagaggga 171598
>emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A23 (ESSA project) Length = 94091 Score = 40.1 bits (20), Expect = 4.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 161 aaggaatggtacgttggaagagcgcagaagaagtcggaaaggga 204 ||||| ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 41506 aaggagtggtatgttggtagagcccagaagaagtcagagaggga 41549
>gb|AC096509.9| Homo sapiens X BAC RP11-454K24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 106440 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ccagatgaagctgctctggc 126 |||||||||||||||||||| Sbjct: 63127 ccagatgaagctgctctggc 63146
>gb|AC104330.2| Homo sapiens chromosome 3 clone RP11-522N9, complete sequence Length = 178219 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aacaataacaagtgttgttg 50 |||||||||||||||||||| Sbjct: 144613 aacaataacaagtgttgttg 144632
>gb|AF322956.1| Tamiasciurus hudsonicus haplotype XII cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 402 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tcaagatttgaatggcaaga 149 |||||||||||||||||||| Sbjct: 139 tcaagatttgaatggcaaga 120
>gb|AF322955.1| Tamiasciurus hudsonicus haplotype XI cytochrome b gene, partial cds; mitochondrial gene for mitochondrial product Length = 402 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tcaagatttgaatggcaaga 149 |||||||||||||||||||| Sbjct: 139 tcaagatttgaatggcaaga 120
>gb|AC006260.4| Arabidopsis thaliana chromosome 2 clone T2N18 map ve018, complete sequence Length = 80736 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 gatccaagtgttttggatttgtga 95 |||||||| ||||||||||||||| Sbjct: 3740 gatccaagggttttggatttgtga 3763
>gb|AC006248.4| Arabidopsis thaliana chromosome 2 clone F9O13 map mi398, complete sequence Length = 119753 Score = 40.1 bits (20), Expect = 4.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 179 agagcgcagaagaagtcggaaagggagatgga 210 ||||| ||||||||||| |||||||| ||||| Sbjct: 12591 agagctcagaagaagtctgaaagggaaatgga 12622
>gb|AC005896.3| Arabidopsis thaliana chromosome 2 clone F3G5 map ve018, complete sequence Length = 119001 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 gatccaagtgttttggatttgtga 95 |||||||| ||||||||||||||| Sbjct: 4433 gatccaagggttttggatttgtga 4410
>gb|AC153823.5| Mus musculus 10 BAC RP23-11M21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210101 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 aaagggagatggagttgaaggaga 221 ||||| |||||||||||||||||| Sbjct: 50548 aaaggaagatggagttgaaggaga 50571
>gb|AF147643.1|AF147643 Tamiasciurus hudsonicus cytochrome b (cytb) gene, partial cds; mitochondrial gene for mitochondrial product Length = 1139 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tcaagatttgaatggcaaga 149 |||||||||||||||||||| Sbjct: 138 tcaagatttgaatggcaaga 119
>gb|AC120570.5| Rattus norvegicus 1 BAC CH230-96N8 (Children's Hospital Oakland Research Institute) complete sequence Length = 227607 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ggatttgtgaactttgaaag 105 |||||||||||||||||||| Sbjct: 8165 ggatttgtgaactttgaaag 8184
>gb|AY048251.1| Arabidopsis thaliana At2g37220/F3G5.1 mRNA, complete cds Length = 1280 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 gatccaagtgttttggatttgtga 95 |||||||| ||||||||||||||| Sbjct: 789 gatccaagggttttggatttgtga 812
>emb|BX819768.1|CNS0A9D9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS25ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1170 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 gatccaagtgttttggatttgtga 95 |||||||| ||||||||||||||| Sbjct: 774 gatccaagggttttggatttgtga 797
>emb|BX827355.1|CNS0A2W2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS43ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1567 Score = 40.1 bits (20), Expect = 4.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 161 aaggaatggtacgttggaagagcgcagaagaagtcggaaaggga 204 ||||| ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 353 aaggagtggtatgttggtagagcccagaagaagtcagagaggga 396
>gb|AC093823.2| Homo sapiens BAC clone RP11-384K20 from 2, complete sequence Length = 155705 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 gaactttgaaagtccagatgaagc 117 |||||||||||||| ||||||||| Sbjct: 104625 gaactttgaaagtcaagatgaagc 104648
>gb|U12643.2|SGU12643 Streptococcus gordonii glucosyltransferase (gtfG), Dsg (dsg), RggD (rggD), and YlbN-like hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 8976 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 gaaggaaatcttcgggaagt 26 |||||||||||||||||||| Sbjct: 8511 gaaggaaatcttcgggaagt 8530
>emb|BX323843.9| Zebrafish DNA sequence from clone CH211-10A23 in linkage group 19, complete sequence Length = 128245 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 aaagtccagatgaagctgct 121 |||||||||||||||||||| Sbjct: 119703 aaagtccagatgaagctgct 119684
>gb|AY088648.1| Arabidopsis thaliana clone 8849 mRNA, complete sequence Length = 1206 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 gatccaagtgttttggatttgtga 95 |||||||| ||||||||||||||| Sbjct: 788 gatccaagggttttggatttgtga 811
>gb|AF296831.1|F18O9 Arabidopsis thaliana BAC F18O9 Length = 95463 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 agttgaaggagaagtttgaa 229 |||||||||||||||||||| Sbjct: 2302 agttgaaggagaagtttgaa 2283
>gb|BT002354.1| Arabidopsis thaliana clone C104970 putative polyadenylate-binding protein 2 (PABP2) (At4g34110) mRNA, complete cds Length = 1921 Score = 40.1 bits (20), Expect = 4.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 161 aaggaatggtacgttggaagagcgcagaagaagtcggaaaggga 204 ||||| ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 847 aaggagtggtatgttggtagagcccagaagaagtcagagaggga 890
>dbj|AB046431.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:T3B16 Length = 85962 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 agttgaaggagaagtttgaa 229 |||||||||||||||||||| Sbjct: 31479 agttgaaggagaagtttgaa 31460
>emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C (3 of 5) Length = 893329 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 agaaccttcaagaggcagca 250 |||||||||||||||||||| Sbjct: 875242 agaaccttcaagaggcagca 875223
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 aaggagaagtttgaaaagaacctt 238 |||||||||| ||||||||||||| Sbjct: 845187 aaggagaagtatgaaaagaacctt 845210
>emb|BX293551.11| Mouse DNA sequence from clone RP23-107O21 on chromosome 2, complete sequence Length = 75604 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 aagggagatggagttgaagg 218 |||||||||||||||||||| Sbjct: 66541 aagggagatggagttgaagg 66560
>emb|AL954341.14| Mouse DNA sequence from clone RP23-213D14 on chromosome 2, complete sequence Length = 178273 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 tccagatgaagctgctctggctgt 129 |||||| ||||||||||||||||| Sbjct: 174913 tccagaggaagctgctctggctgt 174890
>gb|AC135113.4| Mus musculus BAC clone RP24-63N7 from 15, complete sequence Length = 173656 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gaagatccaagtgttttgga 88 |||||||||||||||||||| Sbjct: 169996 gaagatccaagtgttttgga 170015
>gb|AC153943.3| Mus musculus 10 BAC RP24-408O23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171960 Score = 40.1 bits (20), Expect = 4.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 aaagggagatggagttgaaggaga 221 ||||| |||||||||||||||||| Sbjct: 147574 aaaggaagatggagttgaaggaga 147597
>emb|AL845156.5| Mouse DNA sequence from clone RP23-340F21 on chromosome 2, complete sequence Length = 118716 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aagatttgaatggcaagaaa 151 |||||||||||||||||||| Sbjct: 15320 aagatttgaatggcaagaaa 15301
>gb|M97282.1|TAUCYTB Sciurus tamiasciurus hudsonicus mitochondrial cytochrome b gene, partial cds Length = 307 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 tcaagatttgaatggcaaga 149 |||||||||||||||||||| Sbjct: 44 tcaagatttgaatggcaaga 25
>gb|L19418.1|ATHPAB2A Arabidopsis thaliana poly(A)-binding protein mRNA, complete cds Length = 2427 Score = 40.1 bits (20), Expect = 4.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 161 aaggaatggtacgttggaagagcgcagaagaagtcggaaaggga 204 ||||| ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 1178 aaggagtggtatgttggtagagcccagaagaagtcagagaggga 1221 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,976,930 Number of Sequences: 3902068 Number of extensions: 3976930 Number of successful extensions: 80149 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79861 Number of HSP's gapped (non-prelim): 286 length of query: 353 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 331 effective length of database: 17,147,199,772 effective search space: 5675723124532 effective search space used: 5675723124532 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)