>MEN8_SILLA (O24356) MEN-8 protein precursor|
          Length = 100

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = +1

Query: 241 CTGALLNLSSCLTYVESGSALTRPEKGCCGALSGVVDGEAACLC 372
           C   L NL+ C  YV  G+  T P + CC ALSGV      C+C
Sbjct: 38  CASQLGNLNVCAPYVVPGAVNTNPSQECCAALSGV---NHDCMC 78

>RNPH_ECOL6 (P66679) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA|
           nucleotidyltransferase)
          Length = 238

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +1

Query: 244 TGALLNLSSCLT-YVESGSALTRPEKGCCGALS-GVVDGEAAC 366
           TGA + L+  L   VE+G   T P KG   A+S G+V+GEA C
Sbjct: 131 TGACVALADALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVC 173

>RNPH_ECO57 (P66680) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA|
           nucleotidyltransferase)
          Length = 238

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +1

Query: 244 TGALLNLSSCLT-YVESGSALTRPEKGCCGALS-GVVDGEAAC 366
           TGA + L+  L   VE+G   T P KG   A+S G+V+GEA C
Sbjct: 131 TGACVALADALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVC 173

>RNPH_SHIFL (Q83PN2) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA|
           nucleotidyltransferase)
          Length = 238

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +1

Query: 244 TGALLNLSSCLT-YVESGSALTRPEKGCCGALS-GVVDGEAAC 366
           TGA + L+  L   VE+G   T P KG   A+S G+V+GEA C
Sbjct: 131 TGACVALADALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAIC 173

>RNPH_HAEIN (P44444) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA|
           nucleotidyltransferase)
          Length = 238

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
 Frame = +1

Query: 244 TGALLNLSSCLT-YVESGSALTRPEKGCCGALS-GVVDGEAAC 366
           TGA + L   +   +E+G+  T P KG   A+S G+VDG+A C
Sbjct: 131 TGAAVALCDAINGLIENGTLKTNPIKGLVSAISVGIVDGQAVC 173

>MC1_PINRA (O24493) Male-cone protein 1 precursor (PRMC1)|
          Length = 92

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 238 DCTGALLNLSSCLTYVESGSALTRPEKGCCGALSGVVDGEAACLCR 375
           DC+ A+  L+ C + V   S   +P   CC AL G      +C+C+
Sbjct: 27  DCSNAMDKLAPCTSAVGLSSNGVKPSSECCDALKGT---STSCVCK 69

>RNPH_ECOLI (P03842) Ribonuclease PH (EC 2.7.7.56) (RNase PH) (tRNA|
           nucleotidyltransferase)
          Length = 238

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 244 TGALLNLSSCLT-YVESGSALTRPEKGCCGALS-GVVDGEAAC 366
           TGA + L   L   VE+G   T P KG   A+S G+V+GEA C
Sbjct: 131 TGACVALVDALQKLVENGKLKTNPMKGMVAAVSVGIVNGEAVC 173

>NLTP1_LYCES (P93224) Nonspecific lipid-transfer protein 1 precursor (LTP 1)|
          Length = 114

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
 Frame = +1

Query: 235 LDCTGALLNLSSCLTYVESGSALTRPEKGCCGALSGVV-------DGEAACLC 372
           L C      L+ CL Y+E       P  GCCG + G++       D + AC C
Sbjct: 25  LSCGEVTSGLAPCLPYLEGRG----PLGGCCGGVKGLLGAAKTPEDRKTACTC 73

>MAGC1_HUMAN (O60732) Melanoma-associated antigen C1 (MAGE-C1 antigen)|
           (Cancer-testis antigen CT7)
          Length = 1142

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -3

Query: 356 SPSTTPESAPQQPFSGRVSALPDST--YVRQEDRLSSAPVQSSS 231
           SP + PE   Q P    VS+ P ST   + Q   +SS P  +SS
Sbjct: 797 SPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQSSPVSSFPSSTSS 840

>NLTP_AMACA (P80450) Nonspecific lipid-transfer protein (LTP) (Phospholipid|
           transfer protein) (PLTP)
          Length = 94

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 7/51 (13%)
 Frame = +1

Query: 241 CTGALLNLSSCLTYVESGSALTRPEKGCC-------GALSGVVDGEAACLC 372
           CT     L  C+TY++ G+  T P   CC        A   V D   AC C
Sbjct: 4   CTVVTKALGPCMTYLK-GTGATPPPANCCAGVRSLKAAAQTVADRRMACNC 53

>NLTP1_AMAHP (P83167) Nonspecific lipid-transfer protein 1 (LTP 1) (NS-LTP1)|
          Length = 94

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 7/51 (13%)
 Frame = +1

Query: 241 CTGALLNLSSCLTYVESGSALTRPEKGCC-------GALSGVVDGEAACLC 372
           CT     L  C+TY++ G+  T P   CC        A   V D   AC C
Sbjct: 4   CTVVTKALGPCMTYLK-GTGATPPPANCCAGVRSLKAAAQTVADRRMACNC 53

>UGPI5_ARATH (Q9C7F7) Uncharacterized GPI-anchored protein At1g27950 precursor|
          Length = 193

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +1

Query: 238 DCTGALLNLSSCLTYVESGSALTRPEKGCCGALSGVVDGEAACLC 372
           +C      ++ CL +  +G A T P K CC A+  + + +  CLC
Sbjct: 34  ECNQDFQKVTLCLDFA-TGKA-TIPSKKCCDAVEDIKERDPKCLC 76

>FGD3_HUMAN (Q5JSP0) FYVE, RhoGEF and PH domain-containing protein 3 (Zinc|
           finger FYVE domain-containing protein 5)
          Length = 725

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = -2

Query: 165 LQRPDSEEREGDGHGWHHSYGDGLASWYLDCVGRALFDMW 46
           L  PD EER   GH W   +     SWYL      L   W
Sbjct: 657 LSVPDPEERLDSGHVWKLQWAK--QSWYLSASSAELQQQW 694

>FGD3_PONPY (Q5R5T1) FYVE, RhoGEF and PH domain-containing protein 3|
          Length = 737

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/40 (37%), Positives = 16/40 (40%)
 Frame = -2

Query: 165 LQRPDSEEREGDGHGWHHSYGDGLASWYLDCVGRALFDMW 46
           L  PD EER   GH W   +     SWYL      L   W
Sbjct: 669 LSVPDPEERLDSGHVWKLQWAK--QSWYLSASSAELQQRW 706

>MALA_BACST (Q45632) Maltose permease|
          Length = 394

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 117 HHSYGDGLASWYLDCVGRALFDMWRRGA 34
           + + G+GL +W+   VG  L + W+ GA
Sbjct: 337 YSAVGNGLGAWFCTLVGGYLLERWQIGA 364

>SNX19_HUMAN (Q92543) Sorting nexin-19|
          Length = 992

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 353 PSTTPESAPQQPFSGRVSALPDSTYVRQEDRLSSAP 246
           P+  PE  P+QP  GRV +      V  +D  +S P
Sbjct: 779 PTKAPEKDPEQPPKGRVDSCVSDAAVPAQDPSNSDP 814

>GLGB_PSEPK (Q88FN1) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 736

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 27  HTALPVSTCQTEHGRHSPDTKKPGRR 104
           H  LP+S  +  HG+HS   K PG R
Sbjct: 530 HFILPISHDEVVHGKHSLIDKMPGDR 555


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.129    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,956,460
Number of Sequences: 219361
Number of extensions: 600516
Number of successful extensions: 2408
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2401
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)