ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast33b03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464400.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1310 Score = 321 bits (162), Expect = 1e-84 Identities = 240/266 (90%) Strand = Plus / Plus Query: 179 cggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaaccagatcggca 238 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 175 cggcggtgatcgtgttcggggactcgacggtggacacggggaacaacaaccagatcggga 234 Query: 239 cgacgctgcggtccgacttcccgccctacggccgcgacatgccgggcggcgcccgcgcca 298 || |||||||| |||||||||||| ||||| ||||||||||| |||||||| ||||| | Sbjct: 235 cgccgctgcggagcgacttcccgccgtacgggcgcgacatgcccggcggcgcgcgcgcga 294 Query: 299 cggggcggttcggcaacgggcggctgcctccggacttcatctccgaggcgctgggcctgc 358 ||||| ||||||||||||| || || | ||||||||||| || ||| | || ||||||| Sbjct: 295 cggggaggttcggcaacggccgcctcgcgccggacttcatgtcggagtccctcggcctgc 354 Query: 359 cgccgctcgtcccggcctacctcgacccagcctacggcatcggcgacttcgcgcgcggcg 418 |||||||||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||| Sbjct: 355 cgccgctcgtcccggcgtacctcgacccggcctacggcatcgccgacttcgcccgcggcg 414 Query: 419 tctgcttcgcctccgccggcaccggc 444 |||||||||||||||||||||||||| Sbjct: 415 tctgcttcgcctccgccggcaccggc 440
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 321 bits (162), Expect = 1e-84 Identities = 240/266 (90%) Strand = Plus / Plus Query: 179 cggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaaccagatcggca 238 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 4944859 cggcggtgatcgtgttcggggactcgacggtggacacggggaacaacaaccagatcggga 4944918 Query: 239 cgacgctgcggtccgacttcccgccctacggccgcgacatgccgggcggcgcccgcgcca 298 || |||||||| |||||||||||| ||||| ||||||||||| |||||||| ||||| | Sbjct: 4944919 cgccgctgcggagcgacttcccgccgtacgggcgcgacatgcccggcggcgcgcgcgcga 4944978 Query: 299 cggggcggttcggcaacgggcggctgcctccggacttcatctccgaggcgctgggcctgc 358 ||||| ||||||||||||| || || | ||||||||||| || ||| | || ||||||| Sbjct: 4944979 cggggaggttcggcaacggccgcctcgcgccggacttcatgtcggagtccctcggcctgc 4945038 Query: 359 cgccgctcgtcccggcctacctcgacccagcctacggcatcggcgacttcgcgcgcggcg 418 |||||||||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||| Sbjct: 4945039 cgccgctcgtcccggcgtacctcgacccggcctacggcatcgccgacttcgcccgcggcg 4945098 Query: 419 tctgcttcgcctccgccggcaccggc 444 |||||||||||||||||||||||||| Sbjct: 4945099 tctgcttcgcctccgccggcaccggc 4945124 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 331 gacttcatctccgaggcgctgggcctgccgccgctcgtcccggcctacctcgaccc 386 |||||||||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 4943060 gacttcatctccgaggcgttcgggctgccgccgctcgtcccggcctacctcgaccc 4943115 Score = 79.8 bits (40), Expect = 7e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 365 tcgtcccggcctacctcgacccagcctacggcatcggcgacttcgcgcgcggcgtctgct 424 |||||||||||||||||||||| | |||||||||| | |||||||| ||||||||||| Sbjct: 15410654 tcgtcccggcctacctcgacccggactacggcatccgggacttcgccaccggcgtctgct 15410713 Query: 425 tcgcctccgccggcaccggc 444 |||| ||||| ||| ||||| Sbjct: 15410714 tcgcttccgcgggctccggc 15410733 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 179 cggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||||||||||||||||||||| | || ||||||||| Sbjct: 15410471 cggcggtgatcgtgttcggcgactcgacggtggacgccgggaacaacaac 15410520 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 187 atcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 4942889 atcgtgttcggcgactccacggtcgacacgggcaacaacaac 4942930 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 173 tggtaccggcggtgatcgtgttcggcgactcgacggtggac 213 |||| ||||||||| ||||||||||||||||||||||||| Sbjct: 30985747 tggtgccggcggtgtacgtgttcggcgactcgacggtggac 30985707 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 27176386 tcgtgttcggcgactcgacggttgacgtgggcaacaacaac 27176346 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaa 227 |||||||||||||||||||||| ||| | || |||||||| Sbjct: 1046359 tcgtgttcggcgactcgacggtcgacgccgggaacaacaa 1046398 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Minus Query: 190 gtgttcggcgactcgacggtggacacgggcaacaacaacc 229 |||||||| |||||||||||||| | ||||||||||||| Sbjct: 547600 gtgttcggtgactcgacggtggatcccggcaacaacaacc 547561 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 ||||| ||||||||||||||||||| ||||| Sbjct: 4943143 cggcgcctgcttcgcctccgccggcgccggc 4943173 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agggcggcggcggcagcgct 162 |||||||||||||||||||| Sbjct: 10062461 agggcggcggcggcagcgct 10062480
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 321 bits (162), Expect = 1e-84 Identities = 240/266 (90%) Strand = Plus / Plus Query: 179 cggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaaccagatcggca 238 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 15985 cggcggtgatcgtgttcggggactcgacggtggacacggggaacaacaaccagatcggga 16044 Query: 239 cgacgctgcggtccgacttcccgccctacggccgcgacatgccgggcggcgcccgcgcca 298 || |||||||| |||||||||||| ||||| ||||||||||| |||||||| ||||| | Sbjct: 16045 cgccgctgcggagcgacttcccgccgtacgggcgcgacatgcccggcggcgcgcgcgcga 16104 Query: 299 cggggcggttcggcaacgggcggctgcctccggacttcatctccgaggcgctgggcctgc 358 ||||| ||||||||||||| || || | ||||||||||| || ||| | || ||||||| Sbjct: 16105 cggggaggttcggcaacggccgcctcgcgccggacttcatgtcggagtccctcggcctgc 16164 Query: 359 cgccgctcgtcccggcctacctcgacccagcctacggcatcggcgacttcgcgcgcggcg 418 |||||||||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||| Sbjct: 16165 cgccgctcgtcccggcgtacctcgacccggcctacggcatcgccgacttcgcccgcggcg 16224 Query: 419 tctgcttcgcctccgccggcaccggc 444 |||||||||||||||||||||||||| Sbjct: 16225 tctgcttcgcctccgccggcaccggc 16250 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 331 gacttcatctccgaggcgctgggcctgccgccgctcgtcccggcctacctcgaccc 386 |||||||||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 14186 gacttcatctccgaggcgttcgggctgccgccgctcgtcccggcctacctcgaccc 14241 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 187 atcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 14015 atcgtgttcggcgactccacggtcgacacgggcaacaacaac 14056 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 ||||| ||||||||||||||||||| ||||| Sbjct: 14269 cggcgcctgcttcgcctccgccggcgccggc 14299
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 321 bits (162), Expect = 1e-84 Identities = 240/266 (90%) Strand = Plus / Plus Query: 179 cggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaaccagatcggca 238 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 89598 cggcggtgatcgtgttcggggactcgacggtggacacggggaacaacaaccagatcggga 89657 Query: 239 cgacgctgcggtccgacttcccgccctacggccgcgacatgccgggcggcgcccgcgcca 298 || |||||||| |||||||||||| ||||| ||||||||||| |||||||| ||||| | Sbjct: 89658 cgccgctgcggagcgacttcccgccgtacgggcgcgacatgcccggcggcgcgcgcgcga 89717 Query: 299 cggggcggttcggcaacgggcggctgcctccggacttcatctccgaggcgctgggcctgc 358 ||||| ||||||||||||| || || | ||||||||||| || ||| | || ||||||| Sbjct: 89718 cggggaggttcggcaacggccgcctcgcgccggacttcatgtcggagtccctcggcctgc 89777 Query: 359 cgccgctcgtcccggcctacctcgacccagcctacggcatcggcgacttcgcgcgcggcg 418 |||||||||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||| Sbjct: 89778 cgccgctcgtcccggcgtacctcgacccggcctacggcatcgccgacttcgcccgcggcg 89837 Query: 419 tctgcttcgcctccgccggcaccggc 444 |||||||||||||||||||||||||| Sbjct: 89838 tctgcttcgcctccgccggcaccggc 89863 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 331 gacttcatctccgaggcgctgggcctgccgccgctcgtcccggcctacctcgaccc 386 |||||||||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 87799 gacttcatctccgaggcgttcgggctgccgccgctcgtcccggcctacctcgaccc 87854 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 187 atcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 87628 atcgtgttcggcgactccacggtcgacacgggcaacaacaac 87669 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 ||||| ||||||||||||||||||| ||||| Sbjct: 87882 cggcgcctgcttcgcctccgccggcgccggc 87912
>dbj|AK060691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C02, full insert sequence Length = 1310 Score = 321 bits (162), Expect = 1e-84 Identities = 240/266 (90%) Strand = Plus / Plus Query: 179 cggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaaccagatcggca 238 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 175 cggcggtgatcgtgttcggggactcgacggtggacacggggaacaacaaccagatcggga 234 Query: 239 cgacgctgcggtccgacttcccgccctacggccgcgacatgccgggcggcgcccgcgcca 298 || |||||||| |||||||||||| ||||| ||||||||||| |||||||| ||||| | Sbjct: 235 cgccgctgcggagcgacttcccgccgtacgggcgcgacatgcccggcggcgcgcgcgcga 294 Query: 299 cggggcggttcggcaacgggcggctgcctccggacttcatctccgaggcgctgggcctgc 358 ||||| ||||||||||||| || || | ||||||||||| || ||| | || ||||||| Sbjct: 295 cggggaggttcggcaacggccgcctcgcgccggacttcatgtcggagtccctcggcctgc 354 Query: 359 cgccgctcgtcccggcctacctcgacccagcctacggcatcggcgacttcgcgcgcggcg 418 |||||||||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||| Sbjct: 355 cgccgctcgtcccggcgtacctcgacccggcctacggcatcgccgacttcgcccgcggcg 414 Query: 419 tctgcttcgcctccgccggcaccggc 444 |||||||||||||||||||||||||| Sbjct: 415 tctgcttcgcctccgccggcaccggc 440
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 220 bits (111), Expect = 3e-54 Identities = 141/151 (93%) Strand = Plus / Minus Query: 294 cgccacggggcggttcggcaacgggcggctgcctccggacttcatctccgaggcgctggg 353 |||||||||||||||| |||||||||||||||| ||||||||||| || |||||||| || Sbjct: 25492348 cgccacggggcggttctgcaacgggcggctgccgccggacttcatgtcggaggcgctcgg 25492289 Query: 354 cctgccgccgctcgtcccggcctacctcgacccagcctacggcatcggcgacttcgcgcg 413 ||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||| || Sbjct: 25492288 cctgccgccgctcgtgccggcgtacctcgacccggcctacggcatcgccgacttcgcccg 25492229 Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 ||||||||||||||||||||||||||||||| Sbjct: 25492228 cggcgtctgcttcgcctccgccggcaccggc 25492198 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaa 224 |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 25492455 ccggcggtgatcgtgttcggggactcgacggtggacacggggaacaa 25492409 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 173 tggtaccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaacca 230 |||| ||||||||| |||||| |||||||||||| ||||| |||||||||||||| Sbjct: 30314207 tggtgccggcggtgtacgtgttgggcgactcgacgctggacgtcggcaacaacaacca 30314150 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 agggcggcggcggcagcgctgc 164 |||||||||||||||||||||| Sbjct: 25206262 agggcggcggcggcagcgctgc 25206241 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggcagcgctgctggtg 169 |||||||||||| |||||||||||| Sbjct: 26553664 ggcggcggcggcggcgctgctggtg 26553688
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 220 bits (111), Expect = 3e-54 Identities = 141/151 (93%) Strand = Plus / Minus Query: 294 cgccacggggcggttcggcaacgggcggctgcctccggacttcatctccgaggcgctggg 353 |||||||||||||||| |||||||||||||||| ||||||||||| || |||||||| || Sbjct: 10665 cgccacggggcggttctgcaacgggcggctgccgccggacttcatgtcggaggcgctcgg 10606 Query: 354 cctgccgccgctcgtcccggcctacctcgacccagcctacggcatcggcgacttcgcgcg 413 ||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||| || Sbjct: 10605 cctgccgccgctcgtgccggcgtacctcgacccggcctacggcatcgccgacttcgcccg 10546 Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 ||||||||||||||||||||||||||||||| Sbjct: 10545 cggcgtctgcttcgcctccgccggcaccggc 10515 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaa 224 |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 10772 ccggcggtgatcgtgttcggggactcgacggtggacacggggaacaa 10726
>dbj|AK058562.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D11, full insert sequence Length = 1388 Score = 212 bits (107), Expect = 7e-52 Identities = 140/151 (92%) Strand = Plus / Plus Query: 294 cgccacggggcggttcggcaacgggcggctgcctccggacttcatctccgaggcgctggg 353 |||||||||||||||| || ||||||||||||| ||||||||||| || |||||||| || Sbjct: 329 cgccacggggcggttctgcgacgggcggctgccgccggacttcatgtcggaggcgctcgg 388 Query: 354 cctgccgccgctcgtcccggcctacctcgacccagcctacggcatcggcgacttcgcgcg 413 ||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||||||| || Sbjct: 389 cctgccgccgctcgtgccggcgtacctcgacccggcctacggcatcgccgacttcgcccg 448 Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 ||||||||||||||||||||||||||||||| Sbjct: 449 cggcgtctgcttcgcctccgccggcaccggc 479 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaa 224 |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 222 ccggcggtgatcgtgttcggggactcgacggtggacacggggaacaa 268
>emb|AJ606032.1| Triticum aestivum partial mRNA for putative GDSL-motif lipase (at2G04570 gene) Length = 432 Score = 121 bits (61), Expect = 2e-24 Identities = 218/267 (81%), Gaps = 5/267 (1%) Strand = Plus / Plus Query: 179 cggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaaccagatcggca 238 ||||| ||||||||||||||||||||||||||||| |||| ||||||||| | || Sbjct: 104 cggcgctgatcgtgttcggcgactcgacggtggacgcggggaacaacaacgccgtgccca 163 Query: 239 cgacgctgcggtccgacttcccgccctacggccgcgacatgccgggcggcgcccgcgcca 298 || || ||||| | ||||||||||||||||||| ||| | |||||||| |||||||| Sbjct: 164 cggcggtgcggagcaacttcccgccctacggccgggacttcccgggcgg---ccgcgcca 220 Query: 299 cggggcggttcggcaacgggcg-gctgcctccggacttcatctccgaggcgctgggcctg 357 |||| |||||| ||||||| || | ||| || |||||| |||||||||| | || || Sbjct: 221 cgggccggttctgcaacggccgcgtcgccacc-gacttctactccgaggcgttcgggctc 279 Query: 358 ccgccgctcgtcccggcctacctcgacccagcctacggcatcggcgacttcgcgcgcggc 417 | ||| |||| ||||||||||||||||| | |||||||||| |||||||| |||| Sbjct: 280 cggcccttcgttccggcctacctcgacccggactacggcatccaggacttcgccgtcggc 339 Query: 418 gtctgcttcgcctccgccggcaccggc 444 ||||||||||| ||||||||| ||||| Sbjct: 340 gtctgcttcgcgtccgccggctccggc 366
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 93.7 bits (47), Expect = 5e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2448528 ccggcggtgatcgtgttcggcgactcgtcggtggacacgggcaacaacaac 2448578 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3531722 ccggcggtgatcgtgttcggcgactccacggcggacacgggcaacaacaac 3531672 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||| | ||||||||||| ||||||||||| ||| | |||||||||||| Sbjct: 2405743 ccggcgatcatcgtgttcggggactcgacggtcgacgccggcaacaacaac 2405793 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 331 gacttcatctccgaggcgctgggcctgccgcc 362 |||||| |||||||||||||||| |||||||| Sbjct: 3531572 gacttcgtctccgaggcgctggggctgccgcc 3531541 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 ||||||| |||||||||||||||||| |||| Sbjct: 20970716 cggcgtcagcttcgcctccgccggcagcggc 20970686 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 |||||||| |||||||||||||| ||||||| Sbjct: 2448761 cggcgtctccttcgcctccgccgccaccggc 2448791
>dbj|AP005894.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0095O23 Length = 159792 Score = 93.7 bits (47), Expect = 5e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 126938 ccggcggtgatcgtgttcggcgactcgtcggtggacacgggcaacaacaac 126988 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||| | ||||||||||| ||||||||||| ||| | |||||||||||| Sbjct: 84153 ccggcgatcatcgtgttcggggactcgacggtcgacgccggcaacaacaac 84203 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 |||||||| |||||||||||||| ||||||| Sbjct: 127171 cggcgtctccttcgcctccgccgccaccggc 127201
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 93.7 bits (47), Expect = 5e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 35118 ccggcggtgatcgtgttcggcgactcgtcggtggacacgggcaacaacaac 35168 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 |||||||| |||||||||||||| ||||||| Sbjct: 35351 cggcgtctccttcgcctccgccgccaccggc 35381
>dbj|AK059484.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F09, full insert sequence Length = 1326 Score = 93.7 bits (47), Expect = 5e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 142 ccggcggtgatcgtgttcggcgactcgtcggtggacacgggcaacaacaac 192 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 |||||||| |||||||||||||| ||||||| Sbjct: 375 cggcgtctccttcgcctccgccgccaccggc 405
>ref|XM_464399.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1134 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 331 gacttcatctccgaggcgctgggcctgccgccgctcgtcccggcctacctcgaccc 386 |||||||||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 289 gacttcatctccgaggcgttcgggctgccgccgctcgtcccggcctacctcgaccc 344 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 187 atcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 118 atcgtgttcggcgactccacggtcgacacgggcaacaacaac 159 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 ||||| ||||||||||||||||||| ||||| Sbjct: 372 cggcgcctgcttcgcctccgccggcgccggc 402
>dbj|AK108567.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C12, full insert sequence Length = 1426 Score = 87.7 bits (44), Expect = 3e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 331 gacttcatctccgaggcgctgggcctgccgccgctcgtcccggcctacctcgaccc 386 |||||||||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 302 gacttcatctccgaggcgttcgggctgccgccgctcgtcccggcctacctcgaccc 357 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 187 atcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 131 atcgtgttcggcgactccacggtcgacacgggcaacaacaac 172 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 ||||| ||||||||||||||||||| ||||| Sbjct: 385 cggcgcctgcttcgcctccgccggcgccggc 415
>ref|XM_450256.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1183 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 140 ccggcggtgatcgtgttcggcgactccacggcggacacgggcaacaacaac 190 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 331 gacttcatctccgaggcgctgggcctgccgcc 362 |||||| |||||||||||||||| |||||||| Sbjct: 290 gacttcgtctccgaggcgctggggctgccgcc 321
>dbj|AP005571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1451_A02 Length = 135861 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 84610 ccggcggtgatcgtgttcggcgactccacggcggacacgggcaacaacaac 84560 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 331 gacttcatctccgaggcgctgggcctgccgcc 362 |||||| |||||||||||||||| |||||||| Sbjct: 84460 gacttcgtctccgaggcgctggggctgccgcc 84429
>dbj|AP005587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0499G10 Length = 158375 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Minus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 17497 ccggcggtgatcgtgttcggcgactccacggcggacacgggcaacaacaac 17447 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 331 gacttcatctccgaggcgctgggcctgccgcc 362 |||||| |||||||||||||||| |||||||| Sbjct: 17347 gacttcgtctccgaggcgctggggctgccgcc 17316
>dbj|AK107173.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-G06, full insert sequence Length = 1183 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 140 ccggcggtgatcgtgttcggcgactccacggcggacacgggcaacaacaac 190 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Plus Query: 331 gacttcatctccgaggcgctgggcctgccgcc 362 |||||| |||||||||||||||| |||||||| Sbjct: 290 gacttcgtctccgaggcgctggggctgccgcc 321
>dbj|AK059766.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G04, full insert sequence Length = 1134 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 139 ccggcggtgattgtgttcggcgactcgtcggtggacacgggcaacaacaac 189 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 |||||||| |||||||||||||| ||||||| Sbjct: 372 cggcgtctccttcgcctccgccgccaccggc 402
>ref|XM_465469.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1014 Score = 79.8 bits (40), Expect = 7e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 365 tcgtcccggcctacctcgacccagcctacggcatcggcgacttcgcgcgcggcgtctgct 424 |||||||||||||||||||||| | |||||||||| | |||||||| ||||||||||| Sbjct: 287 tcgtcccggcctacctcgacccggactacggcatccgggacttcgccaccggcgtctgct 346 Query: 425 tcgcctccgccggcaccggc 444 |||| ||||| ||| ||||| Sbjct: 347 tcgcttccgcgggctccggc 366 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 179 cggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||||||||||||||||||||| | || ||||||||| Sbjct: 104 cggcggtgatcgtgttcggcgactcgacggtggacgccgggaacaacaac 153
>ref|XM_473407.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1101 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 331 gacttcatctccgaggcgctgggcctgccgccgctcgtcccggcctacctcgaccc 386 ||||||||||||||| || | || |||||||||||||||||||||||||||||||| Sbjct: 172 gacttcatctccgagacgttcgggctgccgccgctcgtcccggcctacctcgaccc 227
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 331 gacttcatctccgaggcgctgggcctgccgccgctcgtcccggcctacctcgaccc 386 ||||||||||||||| || | || |||||||||||||||||||||||||||||||| Sbjct: 130653 gacttcatctccgagacgttcgggctgccgccgctcgtcccggcctacctcgaccc 130598
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 331 gacttcatctccgaggcgctgggcctgccgccgctcgtcccggcctacctcgaccc 386 ||||||||||||||| || | || |||||||||||||||||||||||||||||||| Sbjct: 47211 gacttcatctccgagacgttcgggctgccgccgctcgtcccggcctacctcgaccc 47156
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 331 gacttcatctccgaggcgctgggcctgccgccgctcgtcccggcctacctcgaccc 386 ||||||||||||||| || | || |||||||||||||||||||||||||||||||| Sbjct: 27396057 gacttcatctccgagacgttcgggctgccgccgctcgtcccggcctacctcgaccc 27396002 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||| ||||| ||||||||| |||||||||||| Sbjct: 28098275 tcgtgttcggggactccacggtggacgtcggcaacaacaac 28098235
>dbj|AP005650.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0078K05 Length = 162901 Score = 79.8 bits (40), Expect = 7e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 365 tcgtcccggcctacctcgacccagcctacggcatcggcgacttcgcgcgcggcgtctgct 424 |||||||||||||||||||||| | |||||||||| | |||||||| ||||||||||| Sbjct: 81436 tcgtcccggcctacctcgacccggactacggcatccgggacttcgccaccggcgtctgct 81495 Query: 425 tcgcctccgccggcaccggc 444 |||| ||||| ||| ||||| Sbjct: 81496 tcgcttccgcgggctccggc 81515 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 179 cggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||||||||||||||||||||| | || ||||||||| Sbjct: 81253 cggcggtgatcgtgttcggcgactcgacggtggacgccgggaacaacaac 81302
>ref|XM_475407.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 73.8 bits (37), Expect = 4e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaaccagatcggc 237 ||||||||| ||| |||||||||||||||| ||||| ||||||||||||||| ||| | Sbjct: 121 ccggcggtgttcgcgttcggcgactcgacgctggacccgggcaacaacaaccgcctcgcc 180 Query: 238 acgacgctgcggtccgacttcccgccctacggccgcgacatgccgggcggcgc 290 ||| | |||| ||||| | ||||||||||||||||| | || |||||||| Sbjct: 181 acgctggtgcgcgccgaccacgcgccctacggccgcgacttccccggcggcgc 233
>gb|AC112159.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_C01, complete sequence Length = 114236 Score = 73.8 bits (37), Expect = 4e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaaccagatcggc 237 ||||||||| ||| |||||||||||||||| ||||| ||||||||||||||| ||| | Sbjct: 47850 ccggcggtgttcgcgttcggcgactcgacgctggacccgggcaacaacaaccgcctcgcc 47791 Query: 238 acgacgctgcggtccgacttcccgccctacggccgcgacatgccgggcggcgc 290 ||| | |||| ||||| | ||||||||||||||||| | || |||||||| Sbjct: 47790 acgctggtgcgcgccgaccacgcgccctacggccgcgacttccccggcggcgc 47738
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 73.8 bits (37), Expect = 4e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaaccagatcggc 237 ||||||||| ||| |||||||||||||||| ||||| ||||||||||||||| ||| | Sbjct: 22849146 ccggcggtgttcgcgttcggcgactcgacgctggacccgggcaacaacaaccgcctcgcc 22849087 Query: 238 acgacgctgcggtccgacttcccgccctacggccgcgacatgccgggcggcgc 290 ||| | |||| ||||| | ||||||||||||||||| | || |||||||| Sbjct: 22849086 acgctggtgcgcgccgaccacgcgccctacggccgcgacttccccggcggcgc 22849034 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 25484576 tcgtgttcggggactcgctggtggacaacggcaacaacaac 25484536
>dbj|AK064681.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-A05, full insert sequence Length = 1385 Score = 73.8 bits (37), Expect = 4e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaaccagatcggc 237 ||||||||| ||| |||||||||||||||| ||||| ||||||||||||||| ||| | Sbjct: 161 ccggcggtgttcgcgttcggcgactcgacgctggacccgggcaacaacaaccgcctcgcc 220 Query: 238 acgacgctgcggtccgacttcccgccctacggccgcgacatgccgggcggcgc 290 ||| | |||| ||||| | ||||||||||||||||| | || |||||||| Sbjct: 221 acgctggtgcgcgccgaccacgcgccctacggccgcgacttccccggcggcgc 273
>ref|NM_194799.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0029P06.17), mRNA Length = 351 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||| | | |||||||||||||| ||||||||||||||||||||| Sbjct: 112 ccggcggtgctggcgttcggcgactcgatcgtggacacgggcaacaacaac 162
>gb|AC112513.1| Oryza sativa chromosome 10 clone OSJNAa0029P06, complete sequence Length = 122319 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||| | | |||||||||||||| ||||||||||||||||||||| Sbjct: 36938 ccggcggtgctggcgttcggcgactcgatcgtggacacgggcaacaacaac 36988
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||| | | |||||||||||||| ||||||||||||||||||||| Sbjct: 128471 ccggcggtgctggcgttcggcgactcgatcgtggacacgggcaacaacaac 128521
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||| | | |||||||||||||| ||||||||||||||||||||| Sbjct: 2471739 ccggcggtgctggcgttcggcgactcgatcgtggacacgggcaacaacaac 2471789 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||| |||||||| ||||| |||||| Sbjct: 16556890 tcgtgttcggcgactcgctggtggacaacggcaataacaac 16556930
>dbj|AK100609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107L07, full insert sequence Length = 1299 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||| | | |||||||||||||| ||||||||||||||||||||| Sbjct: 143 ccggcggtgctggcgttcggcgactcgatcgtggacacgggcaacaacaac 193
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||| | | |||||||||||||| ||||||||||||||||||||| Sbjct: 2471690 ccggcggtgctggcgttcggcgactcgatcgtggacacgggcaacaacaac 2471740 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||| |||||||| ||||| |||||| Sbjct: 16565131 tcgtgttcggcgactcgctggtggacaacggcaataacaac 16565171
>ref|XM_467708.1| Oryza sativa (japonica cultivar-group), mRNA Length = 872 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcgacggtggac 213 |||| ||||||||| ||||||||||||||||||||||||| Sbjct: 346 tggtgccggcggtgtacgtgttcggcgactcgacggtggac 386
>ref|XM_506961.1| PREDICTED Oryza sativa (japonica cultivar-group), P0516G10.12-1 mRNA Length = 1637 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcgacggtggac 213 |||| ||||||||| ||||||||||||||||||||||||| Sbjct: 343 tggtgccggcggtgtacgtgttcggcgactcgacggtggac 383
>ref|XM_467707.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1637 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcgacggtggac 213 |||| ||||||||| ||||||||||||||||||||||||| Sbjct: 342 tggtgccggcggtgtacgtgttcggcgactcgacggtggac 382
>ref|XM_470499.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1098 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcga 205 |||| |||||||||||||||||||||||||||| Sbjct: 119 tggtgccggcggtgatcgtgttcggcgactcga 151
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 173 tggtaccggcggtgatcgtgttcggcgactcga 205 |||| |||||||||||||||||||||||||||| Sbjct: 35955195 tggtgccggcggtgatcgtgttcggcgactcga 35955163 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 251 ccgacttcccgccctacggccgcgac 276 |||||||||||||||||||||||||| Sbjct: 26960816 ccgacttcccgccctacggccgcgac 26960841 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 339 ctccgaggcgctgggcctgccgccgctcgtccc 371 |||||||||| | || ||||||||||||||||| Sbjct: 34624553 ctccgaggcgttcgggctgccgccgctcgtccc 34624521 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tgcttcgcctccgccggcaccggc 444 |||||||||||||||||| ||||| Sbjct: 34624474 tgcttcgcctccgccggcgccggc 34624451 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 tgcttcgcctccgccggcaccggc 444 |||||||||||||||||| ||||| Sbjct: 3096032 tgcttcgcctccgccggcgccggc 3096055 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggcagcgctgctggtgcgg 172 |||||||| |||| |||||||||||||| Sbjct: 1056018 ggcggcggaggcaacgctgctggtgcgg 1055991
>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete sequence Length = 164179 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 173 tggtaccggcggtgatcgtgttcggcgactcga 205 |||| |||||||||||||||||||||||||||| Sbjct: 16706 tggtgccggcggtgatcgtgttcggcgactcga 16674
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete sequence Length = 145115 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcga 205 |||| |||||||||||||||||||||||||||| Sbjct: 5986 tggtgccggcggtgatcgtgttcggcgactcga 6018
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 173 tggtaccggcggtgatcgtgttcggcgactcga 205 |||| |||||||||||||||||||||||||||| Sbjct: 36045269 tggtgccggcggtgatcgtgttcggcgactcga 36045237 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 251 ccgacttcccgccctacggccgcgac 276 |||||||||||||||||||||||||| Sbjct: 27052139 ccgacttcccgccctacggccgcgac 27052164 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 339 ctccgaggcgctgggcctgccgccgctcgtccc 371 |||||||||| | || ||||||||||||||||| Sbjct: 34714625 ctccgaggcgttcgggctgccgccgctcgtccc 34714593 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tgcttcgcctccgccggcaccggc 444 |||||||||||||||||| ||||| Sbjct: 34714546 tgcttcgcctccgccggcgccggc 34714523 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 tgcttcgcctccgccggcaccggc 444 |||||||||||||||||| ||||| Sbjct: 3096143 tgcttcgcctccgccggcgccggc 3096166 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggcagcgctgctggtgcgg 172 |||||||| |||| |||||||||||||| Sbjct: 1056016 ggcggcggaggcaacgctgctggtgcgg 1055989
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 72835 tcgtgttcggcgactcgacggttgacgtgggcaacaacaac 72795
>dbj|AP004815.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516G10 Length = 148937 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 173 tggtaccggcggtgatcgtgttcggcgactcgacggtggac 213 |||| ||||||||| ||||||||||||||||||||||||| Sbjct: 40703 tggtgccggcggtgtacgtgttcggcgactcgacggtggac 40663
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||||||||||||||| ||| ||||||||||||| Sbjct: 27057 tcgtgttcggcgactcgacggttgacgtgggcaacaacaac 27017
>dbj|AK111360.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-H05, full insert sequence Length = 888 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcgacggtggac 213 |||| ||||||||| ||||||||||||||||||||||||| Sbjct: 346 tggtgccggcggtgtacgtgttcggcgactcgacggtggac 386
>dbj|AK109857.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-G08, full insert sequence Length = 1648 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcga 205 |||| |||||||||||||||||||||||||||| Sbjct: 309 tggtgccggcggtgatcgtgttcggcgactcga 341
>dbj|AK099325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033016K19, full insert sequence Length = 1637 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcgacggtggac 213 |||| ||||||||| ||||||||||||||||||||||||| Sbjct: 342 tggtgccggcggtgtacgtgttcggcgactcgacggtggac 382
>dbj|AK070261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042P13, full insert sequence Length = 1637 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcgacggtggac 213 |||| ||||||||| ||||||||||||||||||||||||| Sbjct: 343 tggtgccggcggtgcacgtgttcggcgactcgacggtggac 383
>dbj|AK060992.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-D07, full insert sequence Length = 1480 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcga 205 |||| |||||||||||||||||||||||||||| Sbjct: 309 tggtgccggcggtgatcgtgttcggcgactcga 341
>dbj|AK061026.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F09, full insert sequence Length = 1248 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||| | ||||||||||| ||||||||||| ||| | |||||||||||| Sbjct: 112 ccggcgatcatcgtgttcggggactcgacggtcgacgccggcaacaacaac 162
>dbj|AK060124.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-H03, full insert sequence Length = 1077 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 178 ccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||| | ||||||||||| ||||||||||| ||| | |||||||||||| Sbjct: 112 ccggcgatcatcgtgttcggggactcgacggtcgacgccggcaacaacaac 162
>ref|XM_469323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1438 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 251 ccgacttcccgccctacggccgcgac 276 |||||||||||||||||||||||||| Sbjct: 227 ccgacttcccgccctacggccgcgac 252
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 251 ccgacttcccgccctacggccgcgac 276 |||||||||||||||||||||||||| Sbjct: 139816 ccgacttcccgccctacggccgcgac 139841
>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete sequence Length = 111882 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 251 ccgacttcccgccctacggccgcgac 276 |||||||||||||||||||||||||| Sbjct: 98583 ccgacttcccgccctacggccgcgac 98558
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 173 tggtaccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaacca 230 |||| ||||||||| |||||| |||||||||||| ||||| |||||||||||||| Sbjct: 60802 tggtgccggcggtgtacgtgttgggcgactcgacgctggacgtcggcaacaacaacca 60745
>dbj|AK110292.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-G01, full insert sequence Length = 1588 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcgacggtggacacgggcaacaacaacca 230 |||| ||||||||| |||||| |||||||||||| ||||| |||||||||||||| Sbjct: 290 tggtgccggcggtgtacgtgttgggcgactcgacgctggacgtcggcaacaacaacca 347
>dbj|AK099266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013F22, full insert sequence Length = 1508 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 251 ccgacttcccgccctacggccgcgac 276 |||||||||||||||||||||||||| Sbjct: 240 ccgacttcccgccctacggccgcgac 265
>dbj|AK060516.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-A02, full insert sequence Length = 1482 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 251 ccgacttcccgccctacggccgcgac 276 |||||||||||||||||||||||||| Sbjct: 239 ccgacttcccgccctacggccgcgac 264
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 339 ctccgaggcgctgggcctgccgccgctcgtcccggcc 375 |||||||||| | || ||||||||||||||||||||| Sbjct: 23133582 ctccgaggcgttcgggctgccgccgctcgtcccggcc 23133618 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 tgcttcgcctccgccggcaccggc 444 |||||||||||||||||| ||||| Sbjct: 23133661 tgcttcgcctccgccggcgccggc 23133684 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 cggcggtgatcgtgttcggcgact 202 |||||||||| ||||||||||||| Sbjct: 12160877 cggcggtgatggtgttcggcgact 12160900 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 193 ttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||||| |||||||| |||||||||||| Sbjct: 10070980 ttcggcgactcgctggtggacagcggcaacaacaac 10070945
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 339 ctccgaggcgctgggcctgccgccgctcgtcccggcc 375 |||||||||| | || ||||||||||||||||||||| Sbjct: 23061773 ctccgaggcgttcgggctgccgccgctcgtcccggcc 23061809 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 tgcttcgcctccgccggcaccggc 444 |||||||||||||||||| ||||| Sbjct: 23061852 tgcttcgcctccgccggcgccggc 23061875 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 cggcggtgatcgtgttcggcgact 202 |||||||||| ||||||||||||| Sbjct: 12115247 cggcggtgatggtgttcggcgact 12115270 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 193 ttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||||| |||||||| |||||||||||| Sbjct: 10070865 ttcggcgactcgctggtggacagcggcaacaacaac 10070830
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 339 ctccgaggcgctgggcctgccgccgctcgtcccggcc 375 |||||||||| | || ||||||||||||||||||||| Sbjct: 44815 ctccgaggcgttcgggctgccgccgctcgtcccggcc 44779 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tgcttcgcctccgccggcaccggc 444 |||||||||||||||||| ||||| Sbjct: 44736 tgcttcgcctccgccggcgccggc 44713
>ref|XM_463819.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1742 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 190 gtgttcggcgactcgacggtggacacgggcaacaacaacc 229 |||||||| |||||||||||||| | ||||||||||||| Sbjct: 456 gtgttcggtgactcgacggtggatcccggcaacaacaacc 495
>ref|XM_463902.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1137 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaa 227 |||||||||||||||||||||| ||| | || |||||||| Sbjct: 113 tcgtgttcggcgactcgacggtcgacgccgggaacaacaa 152
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Minus Query: 190 gtgttcggcgactcgacggtggacacgggcaacaacaacc 229 |||||||| |||||||||||||| | ||||||||||||| Sbjct: 25653 gtgttcggtgactcgacggtggatcccggcaacaacaacc 25614
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaa 227 |||||||||||||||||||||| ||| | || |||||||| Sbjct: 35067 tcgtgttcggcgactcgacggtcgacgccgggaacaacaa 35106
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1217_F02 Length = 118822 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaa 227 |||||||||||||||||||||| ||| | || |||||||| Sbjct: 117778 tcgtgttcggcgactcgacggtcgacgccgggaacaacaa 117817
>dbj|AK106946.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D11, full insert sequence Length = 1742 Score = 48.1 bits (24), Expect = 0.025 Identities = 36/40 (90%) Strand = Plus / Plus Query: 190 gtgttcggcgactcgacggtggacacgggcaacaacaacc 229 |||||||| |||||||||||||| | ||||||||||||| Sbjct: 456 gtgttcggtgactcgacggtggatcccggcaacaacaacc 495
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Minus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 ||||||| |||||||||||||||||| |||| Sbjct: 62805 cggcgtcagcttcgcctccgccggcagcggc 62775
>dbj|AK112006.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B09, full insert sequence Length = 1300 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 ||||||| |||||||||||||||||| |||| Sbjct: 372 cggcgtcagcttcgcctccgccggcagcggc 402
>dbj|AK111927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-C10, full insert sequence Length = 1463 Score = 46.1 bits (23), Expect = 0.098 Identities = 29/31 (93%) Strand = Plus / Plus Query: 414 cggcgtctgcttcgcctccgccggcaccggc 444 ||||||| |||||||||||||||||| |||| Sbjct: 396 cggcgtcagcttcgcctccgccggcagcggc 426
>emb|X92429.1|SAPURCLUS S.alboniger napH, pur7, pur10, pur6, pur4, pur5 and pur3 genes Length = 9120 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 ctcgccgccggtctcctctccc 72 |||||||||||||||||||||| Sbjct: 8471 ctcgccgccggtctcctctccc 8450
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29 Length = 291000 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 268 ggccgcgacatgccgggcggcg 289 |||||||||||||||||||||| Sbjct: 73679 ggccgcgacatgccgggcggcg 73700
>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0505A04 Length = 159241 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 agggcggcggcggcagcgctgc 164 |||||||||||||||||||||| Sbjct: 24870 agggcggcggcggcagcgctgc 24849
>gb|AY103676.1| Zea mays PCO102242 mRNA sequence Length = 1878 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcagcgctgctg 166 |||||||||||||||||||||| Sbjct: 163 ggcggcggcggcagcgctgctg 184
>ref|XM_483839.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1523 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||| ||||||||| |||||||| |||||||||||| Sbjct: 223 tcgtgtttggcgactcgctggtggacagcggcaacaacaac 263
>ref|XM_475723.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 101 tcgtgttcggggactcgctggtggacaacggcaacaacaac 141
>ref|NM_185080.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 339 ctccgaggcgctgggcctgccgccgctcgtccc 371 |||||||||| | || ||||||||||||||||| Sbjct: 493 ctccgaggcgttcgggctgccgccgctcgtccc 461 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tgcttcgcctccgccggcaccggc 444 |||||||||||||||||| ||||| Sbjct: 414 tgcttcgcctccgccggcgccggc 391
>ref|NM_196893.1| Oryza sativa (japonica cultivar-group) putative early nodulin gene (Enod) related protein (OSJNBa0071K18.9), mRNA Length = 1384 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||| |||||||| ||||| |||||| Sbjct: 121 tcgtgttcggcgactcgctggtggacaacggcaataacaac 161
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 tcggcgacttcgcgcgcggcg 418 ||||||||||||||||||||| Sbjct: 3161993 tcggcgacttcgcgcgcggcg 3162013
>ref|XM_473495.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1104 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||| ||||| ||||||||| |||||||||||| Sbjct: 101 tcgtgttcggggactccacggtggacgtcggcaacaacaac 141
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 985 tcgtgttcggggactcgctggtggacaacggcaacaacaac 945
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 cctacggcatcggcgacttcg 409 ||||||||||||||||||||| Sbjct: 1802577 cctacggcatcggcgacttcg 1802597
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 124937 tcgtgttcggggactcgctggtggacaacggcaacaacaac 124897
>emb|CR724375.2|CNS0GLVH Tetraodon nigroviridis full-length cDNA Length = 1044 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 aagggcggcggcggcagcgctgctg 166 ||||||||||||||| ||||||||| Sbjct: 285 aagggcggcggcggcggcgctgctg 261
>emb|CR723551.2|CNS0GL8L Tetraodon nigroviridis full-length cDNA Length = 1321 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 aagggcggcggcggcagcgctgctg 166 ||||||||||||||| ||||||||| Sbjct: 565 aagggcggcggcggcggcgctgctg 541
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 tccgacttcccgccctacggc 270 ||||||||||||||||||||| Sbjct: 1557448 tccgacttcccgccctacggc 1557468
>ref|XM_970794.1| PREDICTED: Tribolium castaneum similar to membrane-associated ring finger (C3HC4) 6, transcript variant 2 (LOC659835), mRNA Length = 3119 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ctcgccgccggtctcctctcc 71 ||||||||||||||||||||| Sbjct: 417 ctcgccgccggtctcctctcc 437
>ref|XM_961416.1| PREDICTED: Tribolium castaneum similar to membrane-associated ring finger (C3HC4) 6, transcript variant 1 (LOC659835), mRNA Length = 3167 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 ctcgccgccggtctcctctcc 71 ||||||||||||||||||||| Sbjct: 417 ctcgccgccggtctcctctcc 437
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 339 ctccgaggcgctgggcctgccgccgctcgtccc 371 |||||||||| | || ||||||||||||||||| Sbjct: 82270 ctccgaggcgttcgggctgccgccgctcgtccc 82238 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tgcttcgcctccgccggcaccggc 444 |||||||||||||||||| ||||| Sbjct: 82191 tgcttcgcctccgccggcgccggc 82168
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||| |||||||| ||||| |||||| Sbjct: 103352 tcgtgttcggcgactcgctggtggacaacggcaataacaac 103312
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 cggcatcggcgacttcgcgcgcggc 417 ||||| ||||||||||||||||||| Sbjct: 160309 cggcagcggcgacttcgcgcgcggc 160285
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 393 cggcatcggcgacttcgcgcgcggc 417 ||||| ||||||||||||||||||| Sbjct: 112980 cggcagcggcgacttcgcgcgcggc 112956
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||| ||||| ||||||||| |||||||||||| Sbjct: 105500 tcgtgttcggggactccacggtggacgtcggcaacaacaac 105460
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 ggcgctgggcctgccgccgct 365 ||||||||||||||||||||| Sbjct: 784346 ggcgctgggcctgccgccgct 784326
>gb|AC106786.2| Homo sapiens chromosome 5 clone RP11-359P5, complete sequence Length = 107238 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 gcggcggcggcagcgctgctggtgc 170 |||||||| |||||||||||||||| Sbjct: 77059 gcggcggccgcagcgctgctggtgc 77035
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||| ||||||||| |||||||| |||||||||||| Sbjct: 28339357 tcgtgtttggcgactcgctggtggacagcggcaacaacaac 28339397 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcg 204 |||| |||||| || ||||||||||||||||| Sbjct: 680102 tggtgccggcgctgttcgtgttcggcgactcg 680133
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 339 ctccgaggcgctgggcctgccgccgctcgtccc 371 |||||||||| | || ||||||||||||||||| Sbjct: 18780 ctccgaggcgttcgggctgccgccgctcgtccc 18812 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 tgcttcgcctccgccggcaccggc 444 |||||||||||||||||| ||||| Sbjct: 18859 tgcttcgcctccgccggcgccggc 18882
>gb|AC008548.6| Homo sapiens chromosome 5 clone CTC-505D13, complete sequence Length = 116730 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 gcggcggcggcagcgctgctggtgc 170 |||||||| |||||||||||||||| Sbjct: 16192 gcggcggccgcagcgctgctggtgc 16168
>gb|AF272899.1|AF272899 Homo sapiens PR-domain zinc finger protein 6 isoform B (PRDM6) mRNA, partial cds; alternatively spliced Length = 2374 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 gcggcggcggcagcgctgctggtgc 170 |||||||| |||||||||||||||| Sbjct: 734 gcggcggccgcagcgctgctggtgc 710
>gb|AF272898.1|AF272898 Homo sapiens PR-domain zinc finger protein 6 isoform A (PRDM6) mRNA, partial cds; alternatively spliced Length = 2627 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 gcggcggcggcagcgctgctggtgc 170 |||||||| |||||||||||||||| Sbjct: 734 gcggcggccgcagcgctgctggtgc 710
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 gcggtggtaccggcggtgatcgtgt 193 |||||||||||| |||||||||||| Sbjct: 1603913 gcggtggtaccgccggtgatcgtgt 1603937
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 396 catcggcgacttcgcgcgcggcgtc 420 |||||||||| |||||||||||||| Sbjct: 3392715 catcggcgacctcgcgcgcggcgtc 3392739
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggcagcgctgctggtg 169 |||||||||||| |||||||||||| Sbjct: 165703 ggcggcggcggcggcgctgctggtg 165727
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0460H04 Length = 166490 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggcagcgctgctggtg 169 |||||||||||| |||||||||||| Sbjct: 87317 ggcggcggcggcggcgctgctggtg 87341
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||| ||||||||| |||||||| |||||||||||| Sbjct: 68163 tcgtgtttggcgactcgctggtggacagcggcaacaacaac 68203
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||| ||||||||| |||||||| |||||||||||| Sbjct: 131172 tcgtgtttggcgactcgctggtggacagcggcaacaacaac 131212
>dbj|AK108201.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C12, full insert sequence Length = 1375 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||||| |||||||| ||||| |||||| Sbjct: 133 tcgtgttcggcgactcgctggtggacaacggcaataacaac 173
>dbj|AK106778.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H02, full insert sequence Length = 1523 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||| ||||||||| |||||||| |||||||||||| Sbjct: 223 tcgtgtttggcgactcgctggtggacagcggcaacaacaac 263
>dbj|AK104184.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D02, full insert sequence Length = 939 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggcagcgctgctggtg 169 |||||||||||| |||||||||||| Sbjct: 134 ggcggcggcggcggcgctgctggtg 158
>dbj|AK061147.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D08, full insert sequence Length = 1315 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 188 tcgtgttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||| |||||| |||||||| |||||||||||| Sbjct: 165 tcgtgttcggggactcgctggtggacaacggcaacaacaac 205
>dbj|AK060127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A01, full insert sequence Length = 984 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggcagcgctgctggtg 169 |||||||||||| |||||||||||| Sbjct: 130 ggcggcggcggcggcgctgctggtg 154
>dbj|AK060123.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G09, full insert sequence Length = 975 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 ggcggcggcggcagcgctgctggtg 169 |||||||||||| |||||||||||| Sbjct: 137 ggcggcggcggcggcgctgctggtg 161
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 tcggcgacttcgcgcgcggcg 418 ||||||||||||||||||||| Sbjct: 1540061 tcggcgacttcgcgcgcggcg 1540041
>gb|AY940143.1| Gluconobacter oxydans polyol ABC transporter permease (dalT) and D-arabitol dehydrogenase (dalD) genes, complete cds Length = 3619 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gcgtccggccatttccatgt 95 |||||||||||||||||||| Sbjct: 3500 gcgtccggccatttccatgt 3519
>ref|XM_507096.1| PREDICTED Oryza sativa (japonica cultivar-group), P0498H04.26 mRNA Length = 1449 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcg 204 |||| |||||| || ||||||||||||||||| Sbjct: 155 tggtgccggcgctgttcgtgttcggcgactcg 186
>ref|XM_479754.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1327 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcg 204 |||| |||||| || ||||||||||||||||| Sbjct: 163 tggtgccggcgctgttcgtgttcggcgactcg 194
>ref|NM_187562.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 6168 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggcagcgctgctggtgcgg 172 |||||||| |||| |||||||||||||| Sbjct: 5019 ggcggcggaggcaacgctgctggtgcgg 4992
>ref|NM_191973.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5310 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agggcggcggcggcagcgct 162 |||||||||||||||||||| Sbjct: 136 agggcggcggcggcagcgct 155
>gb|BT018454.1| Zea mays clone EL01N0408D11.d mRNA sequence Length = 1429 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Plus Query: 189 cgtgttcggcgactcgacggtggacacgggcaacaacaac 228 ||||||||||||||| |||| |||| ||||| ||||||| Sbjct: 223 cgtgttcggcgactccacggcggacgtgggcaccaacaac 262
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 gcatcggcgacttcgcgcgcggcg 418 |||||| ||||||||||||||||| Sbjct: 219398 gcatcgtcgacttcgcgcgcggcg 219375
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 catcggcgacttcgcgcgcg 415 |||||||||||||||||||| Sbjct: 2251240 catcggcgacttcgcgcgcg 2251221
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 gcatcggcgacttcgcgcgcggcg 418 |||||| ||||||||||||||||| Sbjct: 901688 gcatcgtcgacttcgcgcgcggcg 901665
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gggcggcggcggcagcgctg 163 |||||||||||||||||||| Sbjct: 2905376 gggcggcggcggcagcgctg 2905357
>ref|XM_816325.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053504081.460) partial mRNA Length = 1401 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 419 tctgcttcgcctccgccggcaccg 442 ||||| |||||||||||||||||| Sbjct: 83 tctgcatcgcctccgccggcaccg 60
>gb|BC044116.1| Xenopus laevis keratin 8, mRNA (cDNA clone MGC:53564 IMAGE:4681607), complete cds Length = 2146 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcagcgctgctggtgcggt 173 |||||||||||||||||||| Sbjct: 108 ggcagcgctgctggtgcggt 89
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 344 aggcgctgggcctgccgccgctcg 367 ||||||||| |||||||||||||| Sbjct: 2134690 aggcgctggccctgccgccgctcg 2134713
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 cagatcggcacgacgctgcg 248 |||||||||||||||||||| Sbjct: 1395839 cagatcggcacgacgctgcg 1395820 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 tcggcgacttcgcgcgcggc 417 |||||||||||||||||||| Sbjct: 515271 tcggcgacttcgcgcgcggc 515290
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 tgcttcgcctccgccggcaccggc 444 |||||||||||||||||| ||||| Sbjct: 19045 tgcttcgcctccgccggcgccggc 19068
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 cgaggcgctgggcctgccgccgct 365 |||||||||||||||| ||||||| Sbjct: 164189 cgaggcgctgggcctgtcgccgct 164166
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 cgaggcgctgggcctgccgccgct 365 |||||||||||||||| ||||||| Sbjct: 87260 cgaggcgctgggcctgtcgccgct 87237
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 acggcatcggcgacttcgcg 411 |||||||||||||||||||| Sbjct: 269114 acggcatcggcgacttcgcg 269133
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 gcatcggcgacttcgcgcgcggcg 418 |||||| ||||||||||||||||| Sbjct: 744071 gcatcgtcgacttcgcgcgcggcg 744048
>gb|BC041934.1| Homo sapiens hypothetical protein LOC283981, mRNA (cDNA clone IMAGE:5300719) Length = 1535 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcagcgctgc 164 |||||||||||||||||||| Sbjct: 108 ggcggcggcggcagcgctgc 127
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 ggcgctgctgatgcttccgctggc 125 ||||||||||||||| |||||||| Sbjct: 1938722 ggcgctgctgatgctgccgctggc 1938745
>gb|DQ397554.1| Cenarchaeum symbiosum clone C08F03, complete sequence Length = 36219 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 cgaggcgctgggcctgccgccgct 365 |||||||||| ||||||||||||| Sbjct: 24827 cgaggcgctgcgcctgccgccgct 24850
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 421 tgcttcgcctccgccggcaccggc 444 |||||||||||||||||| ||||| Sbjct: 229 tgcttcgcctccgccggcgccggc 206
>gb|AE005971.1| Caulobacter crescentus CB15 section 297 of 359 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 cgaggcgctgggcctgccgc 361 |||||||||||||||||||| Sbjct: 4653 cgaggcgctgggcctgccgc 4634
>dbj|AK023454.1| Homo sapiens cDNA FLJ13392 fis, clone PLACE1001280 Length = 2132 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcagcgctgc 164 |||||||||||||||||||| Sbjct: 65 ggcggcggcggcagcgctgc 84
>gb|AC093821.3| Homo sapiens BAC clone RP11-381N20 from 4, complete sequence Length = 125151 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcagcgctgc 164 |||||||||||||||||||| Sbjct: 93921 ggcggcggcggcagcgctgc 93902
>ref|XM_932181.1| PREDICTED: Homo sapiens hypothetical protein LOC644431 (LOC644431), mRNA Length = 420 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ggcggcggcggcagcgctgc 164 |||||||||||||||||||| Sbjct: 171 ggcggcggcggcagcgctgc 152
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 cgtcccggcctacctcgacc 385 |||||||||||||||||||| Sbjct: 4218070 cgtcccggcctacctcgacc 4218089
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ggcggtgatcgtgttcggcg 199 |||||||||||||||||||| Sbjct: 20850709 ggcggtgatcgtgttcggcg 20850728
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 agggcggcggcggcagcgct 162 |||||||||||||||||||| Sbjct: 27605640 agggcggcggcggcagcgct 27605621
>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11, complete sequence Length = 126827 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggcagcgctgctggtgcgg 172 |||||||| |||| |||||||||||||| Sbjct: 76233 ggcggcggaggcaacgctgctggtgcgg 76206
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039D04 Length = 184408 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ggcggtgatcgtgttcggcg 199 |||||||||||||||||||| Sbjct: 61499 ggcggtgatcgtgttcggcg 61518
>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485G01 Length = 167203 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 agggcggcggcggcagcgct 162 |||||||||||||||||||| Sbjct: 14206 agggcggcggcggcagcgct 14187
>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0007F06 Length = 150817 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 agggcggcggcggcagcgct 162 |||||||||||||||||||| Sbjct: 72934 agggcggcggcggcagcgct 72915
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 cggcgctgctgatgcttccgctgg 124 ||||||||| |||||||||||||| Sbjct: 5106471 cggcgctgccgatgcttccgctgg 5106494
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 219 caacaacaaccagatcggcacgac 242 ||||||||||||||||||| |||| Sbjct: 5969654 caacaacaaccagatcggcccgac 5969631
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agggcggcggcggcagcgct 162 |||||||||||||||||||| Sbjct: 137154 agggcggcggcggcagcgct 137173
>dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017G06 Length = 150628 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agggcggcggcggcagcgct 162 |||||||||||||||||||| Sbjct: 10155 agggcggcggcggcagcgct 10174
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcg 204 |||| |||||| || ||||||||||||||||| Sbjct: 107480 tggtgccggcgctgttcgtgttcggcgactcg 107511
>dbj|AK119410.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-F06, full insert sequence Length = 3126 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggcagcgctgctggtgcgg 172 |||||||| |||| |||||||||||||| Sbjct: 201 ggcggcggaggcaacgctgctggtgcgg 174
>dbj|AK108623.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D08, full insert sequence Length = 1258 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 ggcggcggcggcagcgctgctggtgcgg 172 |||||||| |||| |||||||||||||| Sbjct: 1006 ggcggcggaggcaacgctgctggtgcgg 1033
>dbj|AK105876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B10, full insert sequence Length = 1449 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcg 204 |||| |||||| || ||||||||||||||||| Sbjct: 155 tggtgccggcgctgttcgtgttcggcgactcg 186
>dbj|AK105249.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-B06, full insert sequence Length = 2063 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 145 ggcggcggcggcagcgctgctggtgcgg 172 |||||||| |||| |||||||||||||| Sbjct: 150 ggcggcggaggcaacgctgctggtgcgg 123
>dbj|AK069672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A20, full insert sequence Length = 1327 Score = 40.1 bits (20), Expect = 6.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 173 tggtaccggcggtgatcgtgttcggcgactcg 204 |||| |||||| || ||||||||||||||||| Sbjct: 163 tggtgccggcgctgttcgtgttcggcgactcg 194
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 caagggcggcggcggcagcg 160 |||||||||||||||||||| Sbjct: 1453172 caagggcggcggcggcagcg 1453153
>dbj|AK063071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-H02, full insert sequence Length = 987 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 193 ttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||||| |||||||| |||||||||||| Sbjct: 176 ttcggcgactcgctggtggacagcggcaacaacaac 211
>gb|AY106782.1| Zea mays PCO117134 mRNA sequence Length = 862 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 gcggcgctgctgatgcttcc 119 |||||||||||||||||||| Sbjct: 86 gcggcgctgctgatgcttcc 67
>dbj|AB074880.1| Chlamydomonas reinhardtii PTB1 mRNA for putative Pi-transporter homologue B1, complete cds Length = 6032 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 ggcggcggcggcagcgctgc 164 |||||||||||||||||||| Sbjct: 1691 ggcggcggcggcagcgctgc 1710
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ccgaggcgctgggcctgccg 360 |||||||||||||||||||| Sbjct: 3914327 ccgaggcgctgggcctgccg 3914346 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 103 gcgctgctgatgcttccgctggca 126 |||||||||||||| ||||||||| Sbjct: 229816 gcgctgctgatgctgccgctggca 229793
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 193 ttcggcgactcgacggtggacacgggcaacaacaac 228 |||||||||||| |||||||| |||||||||||| Sbjct: 91641 ttcggcgactcgctggtggacagcggcaacaacaac 91676
>emb|AL713955.4|CNS07YP3 Oryza sativa chromosome 12, . BAC OSJNBa0017L03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159296 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 cggcggtgatcgtgttcggcgact 202 |||||||||| ||||||||||||| Sbjct: 136440 cggcggtgatggtgttcggcgact 136417
>dbj|AP006657.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT05H03, TM0342b, complete sequence Length = 58173 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctccgccggcaccggcgtcg 448 |||||||||||||||||||| Sbjct: 39218 ctccgccggcaccggcgtcg 39199
>gb|U22356.1|DVU22356 Drosophila virilis corkscrew protein (csw) gene, partial cds Length = 4941 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gggcggcggcggcagcgctg 163 |||||||||||||||||||| Sbjct: 4920 gggcggcggcggcagcgctg 4901
>gb|M13811.1|XELKER2C X.laevis cytokeratin type II mRNA, complete cds Length = 2067 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 154 ggcagcgctgctggtgcggt 173 |||||||||||||||||||| Sbjct: 84 ggcagcgctgctggtgcggt 65 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,257,388 Number of Sequences: 3902068 Number of extensions: 3257388 Number of successful extensions: 89481 Number of sequences better than 10.0: 170 Number of HSP's better than 10.0 without gapping: 188 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83015 Number of HSP's gapped (non-prelim): 6465 length of query: 448 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 426 effective length of database: 17,147,199,772 effective search space: 7304707102872 effective search space used: 7304707102872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
