ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast33b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 48 0.021
2gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence 46 0.082
3emb|AJ421798.1|SCA421798 Streptomyces cattleya thienamycin gene ... 46 0.082
4gb|AE009655.1| Brucella melitensis 16M chromosome II, section 17... 46 0.082
5gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 46 0.082
6emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II... 46 0.082
7dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 46 0.082
8ref|XM_465732.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.32
9emb|AL355312.24| Human DNA sequence from clone RP11-350J20 on ch... 44 0.32
10gb|AC079597.13| Homo sapiens 12q BAC RP11-324H9 (Roswell Park Ca... 44 0.32
11gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 44 0.32
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
13gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 44 0.32
14dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
15dbj|AP005322.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
16gb|AF016585.1|AF016585 Streptomyces caelestis cytochrome P-450 h... 44 0.32
17gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 44 0.32
18gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
19gb|BC029106.1| Mus musculus DNA segment, Chr 2, ERATO Doi 435, e... 42 1.3
20gb|AC148474.1| Pan troglodytes fosmid clone CH1251-1322F5 from Y... 42 1.3
21gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 1.3
22emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.3
23emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 42 1.3
24gb|AC008891.7| Homo sapiens chromosome 19 clone CTD-2226J19, com... 42 1.3
25dbj|BS000583.2| Pan troglodytes chromosome Y clone:PTB-614F22, c... 42 1.3
26dbj|BS000631.2| Pan troglodytes chromosome Y clone: PTB-395F06, ... 42 1.3
27dbj|BS000652.2| Pan troglodytes chromosome Y clone: PTBY-013L08,... 42 1.3
28gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 42 1.3
29gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome 42 1.3
30gb|AC147539.1| Pan troglodytes clone rp43-131i22, complete sequence 42 1.3
31gb|AC093217.4| Homo sapiens chromosome 5 clone CTD-2120M21, comp... 42 1.3
32gb|AE012135.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 1.3
33gb|AC114320.2| Homo sapiens chromosome 5 clone RP11-619I21, comp... 42 1.3
34dbj|AK152984.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 1.3
35dbj|AK153171.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 42 1.3
36gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.3
37dbj|AK016563.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 1.3
38dbj|AK046132.1| Mus musculus adult male corpora quadrigemina cDN... 42 1.3
39dbj|AK051517.1| Mus musculus 12 days embryo spinal ganglion cDNA... 42 1.3
40gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 1.3
41dbj|AK038921.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 42 1.3
42dbj|AK045305.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 42 1.3
43dbj|AK050250.1| Mus musculus adult male liver tumor cDNA, RIKEN ... 42 1.3
44dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
45gb|AC068790.36| Homo sapiens 12 BAC RP11-214K3 (Roswell Park Can... 42 1.3
46gb|AC008760.7| Homo sapiens chromosome 19 clone CTD-3128G10, com... 42 1.3
47dbj|AK217929.1| Mus musculus cDNA, clone:Y2G0143H13, strand:minu... 42 1.3
48gb|DQ314496.1| Uncultured prokaryote 2E01B sequence 42 1.3
49dbj|AK190869.1| Mus musculus cDNA, clone:Y1G0104B09, strand:plus... 42 1.3
50dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 1.3
51dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.3
52dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
53ref|XM_314116.2| Anopheles gambiae str. PEST ENSANGP00000003748 ... 42 1.3
54gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cyto... 42 1.3
55dbj|AK058638.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
56ref|NM_153387.1| Mus musculus DNA segment, Chr 2, ERATO Doi 435,... 42 1.3
57emb|AL845479.8| Mouse DNA sequence from clone RP23-232N20 on chr... 42 1.3
58gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 40 5.1
59ref|XM_520013.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 5.1
60ref|NM_196380.1| Oryza sativa (japonica cultivar-group) putative... 40 5.1
61ref|NM_183795.1| Oryza sativa (japonica cultivar-group), predic... 40 5.1
62gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 5.1
63ref|XM_463425.1| Oryza sativa (japonica cultivar-group), predic... 40 5.1
64ref|NM_192525.1| Oryza sativa (japonica cultivar-group), predic... 40 5.1
65gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 5.1
66gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
67gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
68gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 5.1
69ref|XM_744825.1| Aspergillus fumigatus Af293 branched-chain amin... 40 5.1
70gb|AC068473.19| Homo sapiens chromosome 18, clone RP11-567M16, c... 40 5.1
71ref|XM_815605.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.1
72ref|XM_804167.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.1
73ref|XM_862798.1| PREDICTED: Canis familiaris similar to B-cell r... 40 5.1
74ref|XM_533695.2| PREDICTED: Canis familiaris similar to B-cell r... 40 5.1
75ref|XM_862778.1| PREDICTED: Canis familiaris similar to B-cell r... 40 5.1
76emb|AL354740.29| Human DNA sequence from clone RP11-513I15 on ch... 40 5.1
77emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 40 5.1
78dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.1
79dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
80dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
81dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.1
82gb|AE004968.1| Pseudomonas aeruginosa PAO1, section 529 of 529 o... 40 5.1
83gb|AE004801.1| Pseudomonas aeruginosa PAO1, section 362 of 529 o... 40 5.1
84dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
85dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
86dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
87dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
88dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
89dbj|AP003211.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
90dbj|AK107734.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
91dbj|AK099892.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
92dbj|AK071516.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
93gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 40 5.1
94gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.1
95gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
96gb|U82833.1|OSU82833 Oryza sativa S-adenosyl-L-methionine synthe... 40 5.1
97dbj|AP002956.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.1
98gb|AC170600.2| Mus musculus BAC clone RP23-300L16 from chromosom... 40 5.1
99gb|AY876160.1| Pseudonocardia halophobica strain DSM 43089 gluta... 40 5.1 
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 179     cccggcgcgcgcgtcgtcgtcccg 202
               ||||||||||||||||||||||||
Sbjct: 2372198 cccggcgcgcgcgtcgtcgtcccg 2372221
to top
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence
          Length = 1207381

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 119     cacggcggcggcgctgcgcctcc 141
               |||||||||||||||||||||||
Sbjct: 1121706 cacggcggcggcgctgcgcctcc 1121728
to top
>emb|AJ421798.1|SCA421798 Streptomyces cattleya thienamycin gene cluster
          Length = 32329

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 64    cagcaccgcgcggccggccgggcgcca 90
             |||||||| ||||||||||||||||||
Sbjct: 19678 cagcaccgagcggccggccgggcgcca 19704
to top
>gb|AE009655.1| Brucella melitensis 16M chromosome II, section 17 of 107 of the
            complete sequence
          Length = 10303

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 119  cacggcggcggcgctgcgcctcc 141
            |||||||||||||||||||||||
Sbjct: 7447 cacggcggcggcgctgcgcctcc 7425
to top
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence
          Length = 1162204

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 119     cacggcggcggcgctgcgcctcc 141
               |||||||||||||||||||||||
Sbjct: 1076807 cacggcggcggcgctgcgcctcc 1076829
to top
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain
               2308
          Length = 1156948

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 119     cacggcggcggcgctgcgcctcc 141
               |||||||||||||||||||||||
Sbjct: 1071563 cacggcggcggcgctgcgcctcc 1071585
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 124     cggcggcgctgcgcctcccgctccagg 150
               |||||||||||||||||||| ||||||
Sbjct: 2828407 cggcggcgctgcgcctcccgttccagg 2828381
to top
>ref|XM_465732.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1404

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 120 acggcggcggcgctgcgcctcc 141
           ||||||||||||||||||||||
Sbjct: 49  acggcggcggcgctgcgcctcc 70
to top
>emb|AL355312.24| Human DNA sequence from clone RP11-350J20 on chromosome 6 Contains gene
             FLJ13287, the PCMT1 gene for protein-L-isoaspartate
             (D-aspartate) O-methyltransferase,gene FLJ14735, a novel
             pseudogene, a novel gene, t-complex 1 (TCP1) pseudogene,
             the gene for lymphocyte effector toxicity activation
             ligand (LETAL), the 5' end of a novel gene, a novel
             pseudogene similar to FLJ13465 and four CpG islands,
             complete sequence
          Length = 188684

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 78    cggccgggcgccatggcgcactcctg 103
             ||||||||||||||||| ||||||||
Sbjct: 26657 cggccgggcgccatggctcactcctg 26682
to top
>gb|AC079597.13| Homo sapiens 12q BAC RP11-324H9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 156766

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 78     cggccgggcgccatggcgcactcctg 103
              ||||||||||||||||| ||||||||
Sbjct: 117373 cggccgggcgccatggctcactcctg 117398
to top
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 122     ggcggcggcgctgcgcctcccg 143
               ||||||||||||||||||||||
Sbjct: 2640866 ggcggcggcgctgcgcctcccg 2640887
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 120      acggcggcggcgctgcgcctcc 141
                ||||||||||||||||||||||
Sbjct: 17085204 acggcggcggcgctgcgcctcc 17085183



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 106      tctccgcggcgcgcacggcggcggc 130
                |||||||||||||| ||||||||||
Sbjct: 21130401 tctccgcggcgcgcgcggcggcggc 21130377



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    aggccacggccgtcgaggag 311
              ||||||||||||||||||||
Sbjct: 404942 aggccacggccgtcgaggag 404961
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 111     gcggcgcgcacggcggcggcgc 132
               ||||||||||||||||||||||
Sbjct: 2011172 gcggcgcgcacggcggcggcgc 2011151
to top
>dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0483C08
          Length = 143855

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 120   acggcggcggcgctgcgcctcc 141
             ||||||||||||||||||||||
Sbjct: 66577 acggcggcggcgctgcgcctcc 66556
to top
>dbj|AP005322.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0677G01
          Length = 137031

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 120    acggcggcggcgctgcgcctcc 141
              ||||||||||||||||||||||
Sbjct: 136460 acggcggcggcgctgcgcctcc 136439
to top
>gb|AF016585.1|AF016585 Streptomyces caelestis cytochrome P-450 hydroxylase homolog (nidi)
             gene, partial cds; polyketide synthase modules 1 through 7
             (nidA) genes, complete cds; and N-methyltransferase
             homolog gene, partial cds
          Length = 41097

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 110   cgcggcgcgcacggcggcggcg 131
             ||||||||||||||||||||||
Sbjct: 37474 cgcggcgcgcacggcggcggcg 37453
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 299     ggccgtcgaggaggcgcaggaggaagccgt 328
               ||||||||||||||||| ||| ||||||||
Sbjct: 3135265 ggccgtcgaggaggcgctggatgaagccgt 3135236
to top
>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01,
             complete sequence
          Length = 140077

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 180   ccggcgcgcgcgtcgtcgtcc 200
             |||||||||||||||||||||
Sbjct: 59698 ccggcgcgcgcgtcgtcgtcc 59718
to top
>gb|BC029106.1| Mus musculus DNA segment, Chr 2, ERATO Doi 435, expressed, mRNA
           (cDNA clone MGC:28085 IMAGE:3711922), complete cds
          Length = 2623

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 342 gcgcagctggaagaggatgag 362
           |||||||||||||||||||||
Sbjct: 836 gcgcagctggaagaggatgag 856
to top
>gb|AC148474.1| Pan troglodytes fosmid clone CH1251-1322F5 from Y, complete sequence
          Length = 33077

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 79    ggccgggcgccatggcgcactcctg 103
             |||||||||||||||| ||||||||
Sbjct: 22366 ggccgggcgccatggctcactcctg 22342
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 108     tccgcggcgcgcacggcggcggcgc 132
               |||||||||||| ||||||||||||
Sbjct: 2885699 tccgcggcgcgcgcggcggcggcgc 2885675
to top
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 117    cgcacggcggcggcgctgcgc 137
              |||||||||||||||||||||
Sbjct: 193532 cgcacggcggcggcgctgcgc 193552
to top
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 117    cgcacggcggcggcgctgcgc 137
              |||||||||||||||||||||
Sbjct: 112279 cgcacggcggcggcgctgcgc 112299
to top
>gb|AC008891.7| Homo sapiens chromosome 19 clone CTD-2226J19, complete sequence
          Length = 117628

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 79    ggccgggcgccatggcgcactcctg 103
             |||||||||||||||| ||||||||
Sbjct: 47401 ggccgggcgccatggctcactcctg 47377
to top
>dbj|BS000583.2| Pan troglodytes chromosome Y clone:PTB-614F22, complete sequence
          Length = 158476

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 79     ggccgggcgccatggcgcactcctg 103
              |||||||||||||||| ||||||||
Sbjct: 155639 ggccgggcgccatggctcactcctg 155663
to top
>dbj|BS000631.2| Pan troglodytes chromosome Y clone: PTB-395F06, complete sequence
          Length = 123227

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 79    ggccgggcgccatggcgcactcctg 103
             |||||||||||||||| ||||||||
Sbjct: 36880 ggccgggcgccatggctcactcctg 36904
to top
>dbj|BS000652.2| Pan troglodytes chromosome Y clone: PTBY-013L08, complete sequence
          Length = 134024

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 79    ggccgggcgccatggcgcactcctg 103
             |||||||||||||||| ||||||||
Sbjct: 28894 ggccgggcgccatggctcactcctg 28918
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 79       ggccgggcgccatggcgcactcctg 103
                |||||||||||||||| ||||||||
Sbjct: 16816345 ggccgggcgccatggctcactcctg 16816321
to top
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 130    cgctgcgcctcccgctccagg 150
              |||||||||||||||||||||
Sbjct: 180950 cgctgcgcctcccgctccagg 180970
to top
>gb|AC147539.1| Pan troglodytes clone rp43-131i22, complete sequence
          Length = 175485

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 79     ggccgggcgccatggcgcactcctg 103
              |||||||||||||||| ||||||||
Sbjct: 165215 ggccgggcgccatggctcactcctg 165239
to top
>gb|AC093217.4| Homo sapiens chromosome 5 clone CTD-2120M21, complete sequence
          Length = 173501

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 79    ggccgggcgccatggcgcactcctg 103
             |||||||||||||||| ||||||||
Sbjct: 12624 ggccgggcgccatggctcactcctg 12600
to top
>gb|AE012135.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 43
           of 460 of the complete genome
          Length = 10978

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 89  catggcgcactcctgcctctccgcg 113
           ||||||||||||| |||||||||||
Sbjct: 160 catggcgcactcccgcctctccgcg 136
to top
>gb|AC114320.2| Homo sapiens chromosome 5 clone RP11-619I21, complete sequence
          Length = 43232

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 79    ggccgggcgccatggcgcactcctg 103
             |||||||||||||||| ||||||||
Sbjct: 21509 ggccgggcgccatggctcactcctg 21485
to top
>dbj|AK152984.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830097L22 product:Gamma-tubulin
           complex component 4 (GCP-4), full insert sequence
          Length = 2915

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 342 gcgcagctggaagaggatgag 362
           |||||||||||||||||||||
Sbjct: 831 gcgcagctggaagaggatgag 851
to top
>dbj|AK153171.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:I830126B05 product:Gamma-tubulin
           complex component 4 (GCP-4), full insert sequence
          Length = 2915

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 342 gcgcagctggaagaggatgag 362
           |||||||||||||||||||||
Sbjct: 831 gcgcagctggaagaggatgag 851
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 62     cgcagcaccgcgcggccggcc 82
              |||||||||||||||||||||
Sbjct: 104213 cgcagcaccgcgcggccggcc 104193
to top
>dbj|AK016563.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932441P04 product:UNKNOWN (PROTEIN FOR
           MGC:2720) (GAMMA TUBULIN RING COMPLEX PROTEIN) (76P
           GENE) homolog [Homo sapiens], full insert sequence
          Length = 3178

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 342 gcgcagctggaagaggatgag 362
           |||||||||||||||||||||
Sbjct: 915 gcgcagctggaagaggatgag 935
to top
>dbj|AK046132.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230343J24
           product:GAMMA TUBULIN RING COMPLEX PROTEIN homolog [Homo
           sapiens], full insert sequence
          Length = 2889

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 342 gcgcagctggaagaggatgag 362
           |||||||||||||||||||||
Sbjct: 802 gcgcagctggaagaggatgag 822
to top
>dbj|AK051517.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130054F11 product:SIMILAR TO
           GAMMA TUBULIN RING COMPLEX PROTEIN (76P GENE) homolog
           [Homo sapiens], full insert sequence
          Length = 1994

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 342 gcgcagctggaagaggatgag 362
           |||||||||||||||||||||
Sbjct: 773 gcgcagctggaagaggatgag 793
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 89     catggcgcactcctgcctctccgcg 113
              ||||||||||||| |||||||||||
Sbjct: 459674 catggcgcactcccgcctctccgcg 459650
to top
>dbj|AK038921.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230075N10 product:UNKNOWN
           (PROTEIN FOR MGC:2720) (GAMMA TUBULIN RING COMPLEX
           PROTEIN) (76P GENE) homolog [Homo sapiens], full insert
           sequence
          Length = 3424

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 342 gcgcagctggaagaggatgag 362
           |||||||||||||||||||||
Sbjct: 831 gcgcagctggaagaggatgag 851
to top
>dbj|AK045305.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
           enriched library, clone:B130064C23 product:GAMMA TUBULIN
           RING COMPLEX PROTEIN homolog [Homo sapiens], full insert
           sequence
          Length = 2472

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 342 gcgcagctggaagaggatgag 362
           |||||||||||||||||||||
Sbjct: 765 gcgcagctggaagaggatgag 785
to top
>dbj|AK050250.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length
           enriched library, clone:C730031A08 product:GAMMA TUBULIN
           RING COMPLEX PROTEIN homolog [Homo sapiens], full insert
           sequence
          Length = 4250

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 342 gcgcagctggaagaggatgag 362
           |||||||||||||||||||||
Sbjct: 873 gcgcagctggaagaggatgag 893
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 180      ccggcgcgcgcgtcgtcgtcc 200
                |||||||||||||||||||||
Sbjct: 14112143 ccggcgcgcgcgtcgtcgtcc 14112163



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 121      cggcggcggcgctgcgcctc 140
                ||||||||||||||||||||
Sbjct: 23137126 cggcggcggcgctgcgcctc 23137145
to top
>gb|AC068790.36| Homo sapiens 12 BAC RP11-214K3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 198537

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 79     ggccgggcgccatggcgcactcctg 103
              |||||||||||||||| ||||||||
Sbjct: 100427 ggccgggcgccatggctcactcctg 100451
to top
>gb|AC008760.7| Homo sapiens chromosome 19 clone CTD-3128G10, complete sequence
          Length = 200167

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 355    aggatgagccagcaggggagg 375
              |||||||||||||||||||||
Sbjct: 160506 aggatgagccagcaggggagg 160526



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 79    ggccgggcgccatggcgcactcctg 103
             |||||||||||||||| ||||||||
Sbjct: 76160 ggccgggcgccatggctcactcctg 76184
to top
>dbj|AK217929.1| Mus musculus cDNA, clone:Y2G0143H13, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000039541, based on BLAT search
          Length = 415

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 342 gcgcagctggaagaggatgag 362
           |||||||||||||||||||||
Sbjct: 123 gcgcagctggaagaggatgag 143
to top
>gb|DQ314496.1| Uncultured prokaryote 2E01B sequence
          Length = 34665

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 293  ggccacggccgtcgaggaggc 313
            |||||||||||||||||||||
Sbjct: 9724 ggccacggccgtcgaggaggc 9744
to top
>dbj|AK190869.1| Mus musculus cDNA, clone:Y1G0104B09, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000039541, based on BLAT search
          Length = 408

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 342 gcgcagctggaagaggatgag 362
           |||||||||||||||||||||
Sbjct: 303 gcgcagctggaagaggatgag 323
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 121     cggcggcggcgctgcgcctcc 141
               |||||||||||||||||||||
Sbjct: 2418505 cggcggcggcgctgcgcctcc 2418525
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 65      agcaccgcgcggccggccggg 85
               |||||||||||||||||||||
Sbjct: 1418094 agcaccgcgcggccggccggg 1418074



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 112     cggcgcgcacggcggcggcg 131
               ||||||||||||||||||||
Sbjct: 4850146 cggcgcgcacggcggcggcg 4850127
to top
>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0038F20
          Length = 129595

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 106   tctccgcggcgcgcacggcggcggc 130
             |||||||||||||| ||||||||||
Sbjct: 37117 tctccgcggcgcgcgcggcggcggc 37093
to top
>ref|XM_314116.2| Anopheles gambiae str. PEST ENSANGP00000003748 (ENSANGG00000003004),
            partial mRNA
          Length = 7473

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 220  ccgcacccgtcctgccggtgc 240
            |||||||||||||||||||||
Sbjct: 4775 ccgcacccgtcctgccggtgc 4795
to top
>gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative cytochrome P450-like
             protein, putative DNA-binding protein homolog,
             TATA-binding protein, hypothetical protein M3E9.200,
             3-glucanase, K-exchanger-like protein, small heat
             shock-like protein, methionine synthase protein, putative
             far-red impaired response protein, and putative vegetative
             storage protein genes, complete cds
          Length = 100773

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   cggcggcgctgcgcctcccgc 144
             |||||||||||||||||||||
Sbjct: 55198 cggcggcgctgcgcctcccgc 55178
to top
>dbj|AK058638.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-D08, full
           insert sequence
          Length = 1230

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 180 ccggcgcgcgcgtcgtcgtcc 200
           |||||||||||||||||||||
Sbjct: 451 ccggcgcgcgcgtcgtcgtcc 471
to top
>ref|NM_153387.1| Mus musculus DNA segment, Chr 2, ERATO Doi 435, expressed
           (D2Ertd435e), mRNA
          Length = 2623

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 342 gcgcagctggaagaggatgag 362
           |||||||||||||||||||||
Sbjct: 836 gcgcagctggaagaggatgag 856
to top
>emb|AL845479.8| Mouse DNA sequence from clone RP23-232N20 on chromosome 2, complete
             sequence
          Length = 102283

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 342   gcgcagctggaagaggatgag 362
             |||||||||||||||||||||
Sbjct: 95655 gcgcagctggaagaggatgag 95675
to top
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 109   ccgcggcgcgcacggcggcggcgc 132
             |||||||| |||||||||||||||
Sbjct: 19490 ccgcggcgggcacggcggcggcgc 19513
to top
>ref|XM_520013.1| PREDICTED: Pan troglodytes similar to hypothetical protein
            (LOC464459), mRNA
          Length = 6951

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 122  ggcggcggcgctgcgcctcc 141
            ||||||||||||||||||||
Sbjct: 4131 ggcggcggcgctgcgcctcc 4150
to top
>ref|NM_196380.1| Oryza sativa (japonica cultivar-group) putative tyrosine/dopa
           decarboxylase (OSJNBa0050N08.21), mRNA
          Length = 1509

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 109 ccgcggcgcgcacggcggcg 128
           ||||||||||||||||||||
Sbjct: 718 ccgcggcgcgcacggcggcg 699
to top
>ref|NM_183795.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1185

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 ggcgcgcacggcggcggcgc 132
           ||||||||||||||||||||
Sbjct: 793 ggcgcgcacggcggcggcgc 812
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 177     cgcccggcgcgcgcgtcgtcgtcc 200
               |||||||||||| |||||||||||
Sbjct: 3444719 cgcccggcgcgcacgtcgtcgtcc 3444696
to top
>ref|XM_463425.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1110

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 129 gcgctgcgcctcccgctcca 148
           ||||||||||||||||||||
Sbjct: 834 gcgctgcgcctcccgctcca 815
to top
>ref|NM_192525.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 378

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 105 ctctccgcggcgcgcacggcggcg 128
           ||||||||||||| ||||||||||
Sbjct: 220 ctctccgcggcgctcacggcggcg 243
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 23      acatcaccccgagcttcgtg 42
               ||||||||||||||||||||
Sbjct: 1789742 acatcaccccgagcttcgtg 1789723
to top
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08,
              complete sequence
          Length = 144593

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    ccgcggcgcgcacggcggcg 128
              ||||||||||||||||||||
Sbjct: 108820 ccgcggcgcgcacggcggcg 108839
to top
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
             complete sequence
          Length = 146432

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   cggcggcggcgctgcgcctc 140
             ||||||||||||||||||||
Sbjct: 68901 cggcggcggcgctgcgcctc 68920
to top
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 109     ccgcggcgcgcacggcggcg 128
               ||||||||||||||||||||
Sbjct: 2441310 ccgcggcgcgcacggcggcg 2441291
to top
>ref|XM_744825.1| Aspergillus fumigatus Af293 branched-chain amino acid
           aminotransferase (Afu1g01680) partial mRNA
          Length = 1140

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 111 gcggcgcgcacggcggcggcgctg 134
           |||||| |||||||||||||||||
Sbjct: 874 gcggcgggcacggcggcggcgctg 897
to top
>gb|AC068473.19| Homo sapiens chromosome 18, clone RP11-567M16, complete sequence
          Length = 175721

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ggccggccgggcgccatggc 94
             ||||||||||||||||||||
Sbjct: 63918 ggccggccgggcgccatggc 63899
to top
>ref|XM_815605.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053508707.30) partial mRNA
          Length = 3141

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 214 ttgtcgccgcacccgtcctg 233
           ||||||||||||||||||||
Sbjct: 161 ttgtcgccgcacccgtcctg 180
to top
>ref|XM_804167.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053507037.89) partial mRNA
          Length = 617

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 214 ttgtcgccgcacccgtcctg 233
           ||||||||||||||||||||
Sbjct: 161 ttgtcgccgcacccgtcctg 180
to top
>ref|XM_862798.1| PREDICTED: Canis familiaris similar to B-cell receptor CD22 precursor
            (Leu-14) (B-lymphocyte cell adhesion molecule) (BL-CAM)
            (Siglec-2), transcript variant 4 (LOC476485), mRNA
          Length = 2590

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 31/34 (91%), Gaps = 3/34 (8%)
 Strand = Plus / Plus

                                              
Query: 342  gcgcagctggaagaggat---gagccagcagggg 372
            ||||||||||||||||||   |||||||||||||
Sbjct: 2167 gcgcagctggaagaggatacggagccagcagggg 2200
to top
>ref|XM_533695.2| PREDICTED: Canis familiaris similar to B-cell receptor CD22 precursor
            (Leu-14) (B-lymphocyte cell adhesion molecule) (BL-CAM)
            (Siglec-2), transcript variant 1 (LOC476485), mRNA
          Length = 2562

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 31/34 (91%), Gaps = 3/34 (8%)
 Strand = Plus / Plus

                                              
Query: 342  gcgcagctggaagaggat---gagccagcagggg 372
            ||||||||||||||||||   |||||||||||||
Sbjct: 2139 gcgcagctggaagaggatacggagccagcagggg 2172
to top
>ref|XM_862778.1| PREDICTED: Canis familiaris similar to B-cell receptor CD22 precursor
            (Leu-14) (B-lymphocyte cell adhesion molecule) (BL-CAM)
            (Siglec-2), transcript variant 2 (LOC476485), mRNA
          Length = 2059

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 31/34 (91%), Gaps = 3/34 (8%)
 Strand = Plus / Plus

                                              
Query: 342  gcgcagctggaagaggat---gagccagcagggg 372
            ||||||||||||||||||   |||||||||||||
Sbjct: 1636 gcgcagctggaagaggatacggagccagcagggg 1669
to top
>emb|AL354740.29| Human DNA sequence from clone RP11-513I15 on chromosome 6 Contains the
             5' end of the GRM4 gene for glutamate receptor
             metabotropic 4, keratin 18 pseudogene 1 (KRT18P1), a
             cytochrome c, somatic (CYCS) pseudogene, the HMGA1 gene
             for high mobility group AT-hook 1, a ribosomal protein L35
             (RPL35) pseudogene, part of a novel gene and CpG islands,
             complete sequence
          Length = 151828

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 80    gccgggcgccatggcgcactcctg 103
             |||||||| |||||||||||||||
Sbjct: 72417 gccgggcgtcatggcgcactcctg 72394
to top
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   cctcccgctccaggccgacc 156
             ||||||||||||||||||||
Sbjct: 34896 cctcccgctccaggccgacc 34877
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 127     cggcgctgcgcctcccgctc 146
               ||||||||||||||||||||
Sbjct: 1375540 cggcgctgcgcctcccgctc 1375521
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      ccgcggcgcgcacggcggcg 128
                ||||||||||||||||||||
Sbjct: 13009904 ccgcggcgcgcacggcggcg 13009923
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 129      gcgctgcgcctcccgctcca 148
                ||||||||||||||||||||
Sbjct: 28868072 gcgctgcgcctcccgctcca 28868091



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 105      ctctccgcggcgcgcacggcggcg 128
                ||||||||||||| ||||||||||
Sbjct: 22743736 ctctccgcggcgctcacggcggcg 22743759



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 113      ggcgcgcacggcggcggcgc 132
                ||||||||||||||||||||
Sbjct: 12347557 ggcgcgcacggcggcggcgc 12347538
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 294     gccacggccgtcgaggaggc 313
               ||||||||||||||||||||
Sbjct: 5848822 gccacggccgtcgaggaggc 5848803
to top
>gb|AE004968.1| Pseudomonas aeruginosa PAO1, section 529 of 529 of the complete
           genome
          Length = 9545

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 314 gcaggaggaagccgtacagg 333
           ||||||||||||||||||||
Sbjct: 914 gcaggaggaagccgtacagg 895
to top
>gb|AE004801.1| Pseudomonas aeruginosa PAO1, section 362 of 529 of the complete
            genome
          Length = 10450

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 140  cccgctccaggccgaccacg 159
            ||||||||||||||||||||
Sbjct: 5012 cccgctccaggccgaccacg 4993
to top
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1116_H09
          Length = 110086

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   gcgctgcgcctcccgctcca 148
             ||||||||||||||||||||
Sbjct: 86115 gcgctgcgcctcccgctcca 86134
to top
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1359_D06
          Length = 146805

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    aggccacggccgtcgaggag 311
              ||||||||||||||||||||
Sbjct: 133726 aggccacggccgtcgaggag 133745
to top
>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0017C12
          Length = 135356

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  aggccacggccgtcgaggag 311
            ||||||||||||||||||||
Sbjct: 1183 aggccacggccgtcgaggag 1202
to top
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0024F06
          Length = 129402

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 105    ctctccgcggcgcgcacggcggcg 128
              ||||||||||||| ||||||||||
Sbjct: 120448 ctctccgcggcgctcacggcggcg 120471
to top
>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0712E02
          Length = 158084

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 105   ctctccgcggcgcgcacggcggcg 128
             ||||||||||||| ||||||||||
Sbjct: 61125 ctctccgcggcgctcacggcggcg 61148
to top
>dbj|AP003211.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0011P19
          Length = 150811

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   ggcgcgcacggcggcggcgc 132
             ||||||||||||||||||||
Sbjct: 33202 ggcgcgcacggcggcggcgc 33183
to top
>dbj|AK107734.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-G01, full
           insert sequence
          Length = 787

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 105 ctctccgcggcgcgcacggcggcg 128
           ||||||||||||| ||||||||||
Sbjct: 272 ctctccgcggcgctcacggcggcg 295
to top
>dbj|AK099892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113C03, full
           insert sequence
          Length = 1492

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 aggccacggccgtcgaggag 311
           ||||||||||||||||||||
Sbjct: 800 aggccacggccgtcgaggag 781
to top
>dbj|AK071516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097D07, full
           insert sequence
          Length = 1766

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 ggcgcgcacggcggcggcgc 132
           ||||||||||||||||||||
Sbjct: 929 ggcgcgcacggcggcggcgc 948
to top
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 109   ccgcggcgcgcacggcggcggcgc 132
             |||||||| |||||||||||||||
Sbjct: 20441 ccgcggcgggcacggcggcggcgc 20464
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 144     ctccaggccgaccacgccgc 163
               ||||||||||||||||||||
Sbjct: 1750847 ctccaggccgaccacgccgc 1750828



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    ccgcggcgcgcacggcggcg 128
              ||||||||||||||||||||
Sbjct: 237890 ccgcggcgcgcacggcggcg 237871
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 109      ccgcggcgcgcacggcggcg 128
                ||||||||||||||||||||
Sbjct: 13017244 ccgcggcgcgcacggcggcg 13017263
to top
>gb|U82833.1|OSU82833 Oryza sativa S-adenosyl-L-methionine synthetase (pOS-SAMS2) mRNA,
           complete cds
          Length = 1736

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 ggcgcgcacggcggcggcgc 132
           ||||||||||||||||||||
Sbjct: 919 ggcgcgcacggcggcggcgc 938
to top
>dbj|AP002956.1| Homo sapiens genomic DNA, chromosome 11q clone:R1105h09, complete
              sequence
          Length = 219574

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 286    aggaggaggccacggccgtc 305
              ||||||||||||||||||||
Sbjct: 188549 aggaggaggccacggccgtc 188568
to top
>gb|AC170600.2| Mus musculus BAC clone RP23-300L16 from chromosome 14, complete sequence
          Length = 216861

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    ccatggcgtcgcaggaggag 293
              ||||||||||||||||||||
Sbjct: 168343 ccatggcgtcgcaggaggag 168362
to top
>gb|AY876160.1| Pseudonocardia halophobica strain DSM 43089 glutamyl-tRNA
           synthetase gene, partial cds
          Length = 776

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 66  gcaccgcgcggccggccggg 85
           ||||||||||||||||||||
Sbjct: 285 gcaccgcgcggccggccggg 304


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,043,297
Number of Sequences: 3902068
Number of extensions: 3043297
Number of successful extensions: 72373
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 68952
Number of HSP's gapped (non-prelim): 3424
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top