ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast33a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide ... 708 0.0
2emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlor... 454 e-124
3ref|XM_474360.1| Oryza sativa (japonica cultivar-group), predic... 80 6e-12
4emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4,... 80 6e-12
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 80 6e-12
6dbj|AK104855.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
7dbj|AK103943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
8dbj|AK103940.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
9dbj|AK065236.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
10emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 80 6e-12
11emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 80 6e-12
12emb|X17067.1|ASPCR Avena sativa mRNA for protochlorophyllide red... 62 1e-06
13gb|AF223646.1| Uncultured bacterium plasmid pAH115 esterase gene... 44 0.33
14ref|XM_957279.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.3
15ref|XM_326192.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.3
16gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosom... 42 1.3
17gb|AY862405.1| Musa acuminata NADPH-protochlorophyllide oxidored... 42 1.3
18ref|XM_479797.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.1
19gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
20gb|AC162446.2| Mus musculus chromosome 8, clone RP23-410L16, com... 40 5.1
21gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 5.1
22gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosom... 40 5.1
23ref|XM_982866.1| PREDICTED: Mus musculus microtubule associated ... 40 5.1
24ref|XM_888290.2| PREDICTED: Mus musculus microtubule associated ... 40 5.1
25ref|XM_979773.1| PREDICTED: Mus musculus microtubule associated ... 40 5.1
26emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 5.1
27gb|AC126798.3| Mus musculus BAC clone RP24-229N7 from chromosome... 40 5.1
28gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, compl... 40 5.1
29emb|CR666827.2|CNS0FDHT Tetraodon nigroviridis full-length cDNA 40 5.1
30gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 5.1
31emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 40 5.1
32gb|AF498106.1| Aedes aegypti relish R7 isoform mRNA, complete cd... 40 5.1
33gb|AF498105.1| Aedes aegypti relish R6 isoform mRNA, complete cd... 40 5.1
34gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome... 40 5.1
35dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 5.1
36gb|AE011995.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 5.1
37gb|AE012453.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 5.1
38dbj|AK140821.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 5.1
39gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, comple... 40 5.1
40gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.1
41gb|DQ384244.1| Olyra latifolia tasselseed2-like short-chain dehy... 40 5.1
42gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 5.1
43dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
44dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
45gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.1
46gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complet... 40 5.1
47gb|AE004696.1| Pseudomonas aeruginosa PAO1, section 257 of 529 o... 40 5.1
48gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.1
49dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.1
50dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
51dbj|AK172971.1| Mus musculus mRNA for mKIAA0561 protein 40 5.1
52gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the... 40 5.1
53dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
54gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 5.1
55dbj|AK067392.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.1
56gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 5.1
57gb|BC024265.1| Mus musculus microtubule associated serine/threon... 40 5.1
58gb|AY260760.3| Streptomyces hygroscopicus subsp. yingchengensis ... 40 5.1 
>emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR)
          Length = 1490

 Score =  708 bits (357), Expect = 0.0
 Identities = 357/357 (100%)
 Strand = Plus / Plus

                                                                       
Query: 24  gcagcacagtgcactcgagttcgagctcgttgaactcctgcagtgcagtgctagctagcg 83
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  gcagcacagtgcactcgagttcgagctcgttgaactcctgcagtgcagtgctagctagcg 70

                                                                       
Query: 84  acagtccaagctcaccgtcatccatggctctccagcttctcccctccaccctctccgtcc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  acagtccaagctcaccgtcatccatggctctccagcttctcccctccaccctctccgtcc 130

                                                                       
Query: 144 ccaagaagggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcg 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ccaagaagggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcg 190

                                                                       
Query: 204 tgagcagcaaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgcctt 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tgagcagcaaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgcctt 250

                                                                       
Query: 264 cgccggtgacgacgagcccgggctcgaccgcgtcgtcgccgagcggcaagaagacgctgc 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cgccggtgacgacgagcccgggctcgaccgcgtcgtcgccgagcggcaagaagacgctgc 310

                                                                    
Query: 324 ggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggcca 380
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggcca 367
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>emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlorophyilide reductase
          Length = 1484

 Score =  454 bits (229), Expect = e-124
 Identities = 274/289 (94%)
 Strand = Plus / Plus

                                                                       
Query: 92  agctcaccgtcatccatggctctccagcttctcccctccaccctctccgtccccaagaag 151
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 58  agctcaccgtcatccatggctctccagctcctcccctccaccctctccgtccccaagaag 117

                                                                       
Query: 152 ggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcgtgagcagc 211
           || |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 118 ggtagcagcatgggcgcggcggcagtgaaggacacggcggcgttcctgggcgtgagcagc 177

                                                                       
Query: 212 aaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgccttcgccggtg 271
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 178 aaggcgaagaaggcgtcgctagcggtgaggacgcaggtggccacggcgccttcgtcggtg 237

                                                                       
Query: 272 acgacgagcccgggctcgaccgcgtcgtcgccgagcggcaagaagacgctgcggcagggc 331
           |||||||||||||||||| |  || ||  |||||||||||||||||||||||||||||||
Sbjct: 238 acgacgagcccgggctcggcgacggcgaagccgagcggcaagaagacgctgcggcagggc 297

                                                            
Query: 332 gtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggcca 380
           ||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 298 gtggtggtgatcacgggcgcgtcgtccgggctgggtctggcggcggcca 346
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>ref|XM_474360.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1164

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 311 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 370
           |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 202 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 261

                   
Query: 371 gcggcggc 378
           ||||||||
Sbjct: 262 gcggcggc 269
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>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
            complete sequence
          Length = 133331

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                        
Query: 311  aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 370
            |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 4144 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 4203

                    
Query: 371  gcggcggc 378
            ||||||||
Sbjct: 4204 gcggcggc 4211
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                            
Query: 311      aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 370
                |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 34698582 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 34698641

                        
Query: 371      gcggcggc 378
                ||||||||
Sbjct: 34698642 gcggcggc 34698649
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>dbj|AK104855.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B11, full
           insert sequence
          Length = 1384

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 311 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 370
           |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333

                   
Query: 371 gcggcggc 378
           ||||||||
Sbjct: 334 gcggcggc 341
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>dbj|AK103943.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G12, full
           insert sequence
          Length = 1384

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 311 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 370
           |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333

                   
Query: 371 gcggcggc 378
           ||||||||
Sbjct: 334 gcggcggc 341
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>dbj|AK103940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G08, full
           insert sequence
          Length = 1384

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 311 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 370
           |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333

                   
Query: 371 gcggcggc 378
           ||||||||
Sbjct: 334 gcggcggc 341
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>dbj|AK065236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H23, full
           insert sequence
          Length = 1385

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 311 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 370
           |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 275 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 334

                   
Query: 371 gcggcggc 378
           ||||||||
Sbjct: 335 gcggcggc 342
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>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete
             sequence
          Length = 100836

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                         
Query: 311   aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 370
             |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 96506 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 96565

                     
Query: 371   gcggcggc 378
             ||||||||
Sbjct: 96566 gcggcggc 96573
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>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete
             sequence
          Length = 103264

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                         
Query: 311   aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 370
             |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || 
Sbjct: 41602 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 41661

                     
Query: 371   gcggcggc 378
             ||||||||
Sbjct: 41662 gcggcggc 41669
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>emb|X17067.1|ASPCR Avena sativa mRNA for protochlorophyllide reductase
          Length = 1146

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                              
Query: 330 gcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggcca 380
           ||||||||||||||||||||||||| || || || ||||| ||||||||||
Sbjct: 1   gcgtggtggtgatcacgggcgcgtcgtcgggcctcggcctcgcggcggcca 51
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>gb|AF223646.1| Uncultured bacterium plasmid pAH115 esterase gene, complete cds
          Length = 2142

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 284 ggctcgaccgcgtcgtcgccga 305
           ||||||||||||||||||||||
Sbjct: 140 ggctcgaccgcgtcgtcgccga 119
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>ref|XM_957279.1| Neurospora crassa OR74A hypothetical protein (NCU06338.1) partial
            mRNA
          Length = 5772

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 200  ggcgtgagcagcaaggcgaagaagg 224
            ||||||||||||||||| |||||||
Sbjct: 5698 ggcgtgagcagcaaggcaaagaagg 5722
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>ref|XM_326192.1| Neurospora crassa OR74A hypothetical protein (NCU06338.1) partial
            mRNA
          Length = 5772

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 200  ggcgtgagcagcaaggcgaagaagg 224
            ||||||||||||||||| |||||||
Sbjct: 5698 ggcgtgagcagcaaggcaaagaagg 5722
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>gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosome 1, complete sequence
          Length = 164612

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 119   cttctcccctccaccctctcc 139
             |||||||||||||||||||||
Sbjct: 42019 cttctcccctccaccctctcc 41999
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>gb|AY862405.1| Musa acuminata NADPH-protochlorophyllide oxidoreductase gene,
           complete cds
          Length = 1619

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 319 gctgcggcagggcgtggtggtgatcacgggcgc 351
           ||||||| ||||||||||||| ||||| |||||
Sbjct: 423 gctgcggaagggcgtggtggtaatcaccggcgc 455
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>ref|XM_479797.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2387

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 206  agcagcaaggcgaagaaggcgtcgctgg 233
            |||||||||||||| |||||| ||||||
Sbjct: 1676 agcagcaaggcgaacaaggcggcgctgg 1703
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>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
             complete sequence
          Length = 134183

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   ctcgaccgcgtcgtcgccga 305
             ||||||||||||||||||||
Sbjct: 50427 ctcgaccgcgtcgtcgccga 50446
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>gb|AC162446.2| Mus musculus chromosome 8, clone RP23-410L16, complete sequence
          Length = 197906

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    gctgcggcagggcgtggtgg 338
              ||||||||||||||||||||
Sbjct: 132507 gctgcggcagggcgtggtgg 132526
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 212     aaggcgaagaaggcgtcgctggcg 235
               |||| |||||||||||||||||||
Sbjct: 3274483 aaggggaagaaggcgtcgctggcg 3274506
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>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence
          Length = 211910

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    ctctccagcttctcccctcc 130
              ||||||||||||||||||||
Sbjct: 118208 ctctccagcttctcccctcc 118189
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>ref|XM_982866.1| PREDICTED: Mus musculus microtubule associated serine/threonine
            kinase 3, transcript variant 2 (Mast3), mRNA
          Length = 4425

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  gctgcggcagggcgtggtgg 338
            ||||||||||||||||||||
Sbjct: 3427 gctgcggcagggcgtggtgg 3408
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>ref|XM_888290.2| PREDICTED: Mus musculus microtubule associated serine/threonine
            kinase 3, transcript variant 2 (Mast3), mRNA
          Length = 4425

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  gctgcggcagggcgtggtgg 338
            ||||||||||||||||||||
Sbjct: 3427 gctgcggcagggcgtggtgg 3408
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>ref|XM_979773.1| PREDICTED: Mus musculus microtubule associated serine/threonine
            kinase 3 (Mast3), mRNA
          Length = 4425

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  gctgcggcagggcgtggtgg 338
            ||||||||||||||||||||
Sbjct: 3427 gctgcggcagggcgtggtgg 3408
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 325     gcagggcgtggtggtgatca 344
               ||||||||||||||||||||
Sbjct: 4141015 gcagggcgtggtggtgatca 4141034
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>gb|AC126798.3| Mus musculus BAC clone RP24-229N7 from chromosome 1, complete sequence
          Length = 172452

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    ccccaagaagggcagcagca 161
              ||||||||||||||||||||
Sbjct: 124088 ccccaagaagggcagcagca 124069
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>gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, complete sequence
          Length = 223130

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     gcagtgcagtgctagctagc 82
              ||||||||||||||||||||
Sbjct: 181503 gcagtgcagtgctagctagc 181484
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>emb|CR666827.2|CNS0FDHT Tetraodon nigroviridis full-length cDNA
          Length = 555

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 ggtgaaggacacggcggcgt 194
           ||||||||||||||||||||
Sbjct: 224 ggtgaaggacacggcggcgt 205
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 360     ggctgggcctggcggcggcc 379
               ||||||||||||||||||||
Sbjct: 1077017 ggctgggcctggcggcggcc 1077036
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>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    gctgggcctggcggcggcca 380
              ||||||||||||||||||||
Sbjct: 107449 gctgggcctggcggcggcca 107468
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>gb|AF498106.1| Aedes aegypti relish R7 isoform mRNA, complete cds; alternatively
            spliced
          Length = 2730

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 47   agctcgttgaactcctgcag 66
            ||||||||||||||||||||
Sbjct: 1390 agctcgttgaactcctgcag 1409
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>gb|AF498105.1| Aedes aegypti relish R6 isoform mRNA, complete cds; alternatively
            spliced
          Length = 3280

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 47   agctcgttgaactcctgcag 66
            ||||||||||||||||||||
Sbjct: 1941 agctcgttgaactcctgcag 1960
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>gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome 12, complete
            sequence
          Length = 201550

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   gcagtgcagtgctagctagc 82
            ||||||||||||||||||||
Sbjct: 2135 gcagtgcagtgctagctagc 2154
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 325     gcagggcgtggtggtgatca 344
               ||||||||||||||||||||
Sbjct: 1108145 gcagggcgtggtggtgatca 1108126
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>gb|AE011995.1| Xanthomonas axonopodis pv. citri str. 306,  section 373 of 469 of the
            complete genome
          Length = 11692

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  gcagggcgtggtggtgatca 344
            ||||||||||||||||||||
Sbjct: 3837 gcagggcgtggtggtgatca 3856
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>gb|AE012453.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 361
            of 460 of the complete genome
          Length = 10452

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  gcagggcgtggtggtgatca 344
            ||||||||||||||||||||
Sbjct: 3550 gcagggcgtggtggtgatca 3569
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>dbj|AK140821.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130034L06 product:weakly similar to
            Sast-pending protein [Mus musculus], full insert sequence
          Length = 4263

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  gctgcggcagggcgtggtgg 338
            ||||||||||||||||||||
Sbjct: 3507 gctgcggcagggcgtggtgg 3488
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>gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, complete sequence
          Length = 104285

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   ccagcttctcccctccaccc 134
             ||||||||||||||||||||
Sbjct: 51908 ccagcttctcccctccaccc 51927
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 210     gcaaggcgaagaaggcgtcg 229
               ||||||||||||||||||||
Sbjct: 1457481 gcaaggcgaagaaggcgtcg 1457500
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>gb|DQ384244.1| Olyra latifolia tasselseed2-like short-chain
           dehydrogenase/reductase gene, partial cds
          Length = 759

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 250 ggccacggcgccttcgccggtgacgacg 277
           ||||||| ||||||||||| ||||||||
Sbjct: 565 ggccacgacgccttcgccgctgacgacg 592
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    gcagggcgtggtggtgatca 344
              ||||||||||||||||||||
Sbjct: 978778 gcagggcgtggtggtgatca 978759
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 206    agcagcaaggcgaagaaggcgtcgctgg 233
              |||||||||||||| |||||| ||||||
Sbjct: 971854 agcagcaaggcgaacaaggcggcgctgg 971881
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 286      ctcgaccgcgtcgtcgccga 305
                ||||||||||||||||||||
Sbjct: 16551688 ctcgaccgcgtcgtcgccga 16551707
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 258     cgccttcgccggtgacgacg 277
               ||||||||||||||||||||
Sbjct: 2286225 cgccttcgccggtgacgacg 2286244
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>gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complete sequence
          Length = 185555

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 112   tctccagcttctcccctccaccct 135
             ||||||||||||| ||||||||||
Sbjct: 85347 tctccagcttctctcctccaccct 85370
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>gb|AE004696.1| Pseudomonas aeruginosa PAO1, section 257 of 529 of the complete
            genome
          Length = 14449

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 223  ggcgtcgctggcggtgagga 242
            ||||||||||||||||||||
Sbjct: 4846 ggcgtcgctggcggtgagga 4865
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 288     cgaccgcgtcgtcgccgagc 307
               ||||||||||||||||||||
Sbjct: 1012168 cgaccgcgtcgtcgccgagc 1012187
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 286     ctcgaccgcgtcgtcgccga 305
               ||||||||||||||||||||
Sbjct: 2286263 ctcgaccgcgtcgtcgccga 2286282



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 286     ctcgaccgcgtcgtcgccga 305
               ||||||||||||||||||||
Sbjct: 1600910 ctcgaccgcgtcgtcgccga 1600929
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>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470F10
          Length = 185294

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 206    agcagcaaggcgaagaaggcgtcgctgg 233
              |||||||||||||| |||||| ||||||
Sbjct: 134592 agcagcaaggcgaacaaggcggcgctgg 134619
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>dbj|AK172971.1| Mus musculus mRNA for mKIAA0561 protein
          Length = 1425

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 gctgcggcagggcgtggtgg 338
           ||||||||||||||||||||
Sbjct: 703 gctgcggcagggcgtggtgg 684
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>gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the complete genome
          Length = 12204

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 288  cgaccgcgtcgtcgccgagc 307
            ||||||||||||||||||||
Sbjct: 5711 cgaccgcgtcgtcgccgagc 5692
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>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
           BAC clone:OJ1005_B05
          Length = 144799

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 206 agcagcaaggcgaagaaggcgtcgctgg 233
           |||||||||||||| |||||| ||||||
Sbjct: 381 agcagcaaggcgaacaaggcggcgctgg 408
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 285     gctcgaccgcgtcgtcgccgagcg 308
               ||||||||| ||||||||||||||
Sbjct: 1756600 gctcgaccgggtcgtcgccgagcg 1756623
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>dbj|AK067392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104G24, full
            insert sequence
          Length = 2387

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 206  agcagcaaggcgaagaaggcgtcgctgg 233
            |||||||||||||| |||||| ||||||
Sbjct: 1676 agcagcaaggcgaacaaggcggcgctgg 1703
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 325     gcagggcgtggtggtgatca 344
               ||||||||||||||||||||
Sbjct: 1141678 gcagggcgtggtggtgatca 1141659
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>gb|BC024265.1| Mus musculus microtubule associated serine/threonine kinase 3, mRNA
            (cDNA clone IMAGE:5137303), complete cds
          Length = 3042

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  gctgcggcagggcgtggtgg 338
            ||||||||||||||||||||
Sbjct: 1139 gctgcggcagggcgtggtgg 1120
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>gb|AY260760.3| Streptomyces hygroscopicus subsp. yingchengensis Shy1 (shy1), CvhE
            (cvhE), CvhD (cvhD), CvhC (cvhC), CvhB (cvhB), CvhA
            (cvhA), Shy26 (shy26), Shy4 (shy4), Shy5 (shy5), Shy6
            (shy6), Shy7 (shy7), Shy8 (shy8), Shy9 (shy9), Shy10
            (shy10), Shy11 (shy11), Shy12 (shy12), Shy13 (shy13),
            Shy14 (shy14), Shy15 (shy15), Shy16 (shy16), Shy17
            (shy17), Shy18 (shy18), Hmr19 (hmr19), Shy20 (shy20),
            Shy21 (shy21), Shy22 (shy22), Shy23 (shy23), Shy24
            (shy24), and Shy25 (shy25) genes, complete cds
          Length = 36687

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 361  gctgggcctggcggcggcca 380
            ||||||||||||||||||||
Sbjct: 2550 gctgggcctggcggcggcca 2531


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,447,567
Number of Sequences: 3902068
Number of extensions: 3447567
Number of successful extensions: 74788
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73311
Number of HSP's gapped (non-prelim): 1476
length of query: 382
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 360
effective length of database: 17,147,199,772
effective search space: 6172991917920
effective search space used: 6172991917920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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