ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast33a07 |
|---|---|
| Clone Library Name | barley_pub |
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 151 bits (381), Expect = 8e-37 Identities = 70/81 (86%), Positives = 77/81 (95%) Frame = +3 Query: 192 RCPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVRG 371 RCP +D+QAL+RVKQ+LGNPATL TWS ASADCC WDH+RCDEAGRVNNVFIDGA+DVRG Sbjct: 26 RCPPSDKQALMRVKQSLGNPATLSTWSLASADCCEWDHVRCDEAGRVNNVFIDGANDVRG 85 Query: 372 QIPSALAGLTALMSLSLFRLP 434 QIPSA+AGLTALMSLSLFRLP Sbjct: 86 QIPSAVAGLTALMSLSLFRLP 106
>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 342 Score = 55.8 bits (133), Expect = 4e-08 Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 6/77 (7%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 359 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G + Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLN 90 Query: 360 DVRG-QIPSALAGLTAL 407 + IPS+LA L L Sbjct: 91 LPKPYPIPSSLANLPYL 107
>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) Length = 342 Score = 55.5 bits (132), Expect = 6e-08 Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 6/77 (7%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 359 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G + Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90 Query: 360 DVRG-QIPSALAGLTAL 407 + IPS+LA L L Sbjct: 91 LPKPYPIPSSLANLPYL 107
>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 342 Score = 55.5 bits (132), Expect = 6e-08 Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 6/77 (7%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 359 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G + Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90 Query: 360 DVRG-QIPSALAGLTAL 407 + IPS+LA L L Sbjct: 91 LPKPYPIPSSLANLPYL 107
>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor| (Polygalacturonase-inhibiting protein) Length = 330 Score = 53.5 bits (127), Expect = 2e-07 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 1/81 (1%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDE-AGRVNNVFIDGADDVRG 371 C D++ LL++K+A G+P L +W + DCC W + CD R+N++ I A V G Sbjct: 27 CNPDDKKVLLQIKKAFGDPYVLASWK-SDTDCCDWYCVTCDSTTNRINSLTI-FAGQVSG 84 Query: 372 QIPSALAGLTALMSLSLFRLP 434 QIP+ + L L +L + P Sbjct: 85 QIPALVGDLPYLETLEFHKQP 105
>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 330 Score = 53.5 bits (127), Expect = 2e-07 Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 4/82 (4%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFI-DGADD 362 C + D+ LL++K++L NP L +W P DCC+W L C +A RV ++ I DG + Sbjct: 25 CHKDDKTTLLKIKKSLNNPYHLASWDP-KTDCCSWYCLECGDATVNHRVTSLIIQDG--E 81 Query: 363 VRGQIPSALAGLTALMSLSLFR 428 + GQIP + L L SL +FR Sbjct: 82 ISGQIPPEVGDLPYLTSL-IFR 102
>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 330 Score = 51.2 bits (121), Expect = 1e-06 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 3/82 (3%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFIDGADDV 365 C Q D+ LL++K++L NP L +W P DCC+W L C +A RV + I + + Sbjct: 25 CNQNDKNTLLKIKKSLNNPYHLASWDP-QTDCCSWYCLECGDATVNHRVTALTI-FSGQI 82 Query: 366 RGQIPSALAGLTALMSLSLFRL 431 GQIP+ + L L +L +L Sbjct: 83 SGQIPAEVGDLPYLETLVFRKL 104
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 41.2 bits (95), Expect = 0.001 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Frame = +3 Query: 204 ADRQALLRVKQALGNPATLKTWS-PASADCCTWDHLRCDEAGRVNNVFIDGADDVRGQIP 380 ++ +L+ K++L NP+ L +W+ +SA C W + C GRVN++ + +RGQIP Sbjct: 25 SETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTC-LLGRVNSLSLPSL-SLRGQIP 82 Query: 381 SALAGLTALMSLSL 422 ++ L L L L Sbjct: 83 KEISSLKNLRELCL 96
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 38.9 bits (89), Expect = 0.005 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 24/98 (24%) Frame = +3 Query: 204 ADRQALLRVKQALGNP-ATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGA-------- 356 A+ AL +K +L +P L++W CTW H+ C+ V V + A Sbjct: 27 AEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVM 86 Query: 357 ---------------DDVRGQIPSALAGLTALMSLSLF 425 +++ G IP L LT L+SL L+ Sbjct: 87 QLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLY 124
>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor| Length = 372 Score = 38.5 bits (88), Expect = 0.007 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 15/91 (16%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNP--ATLKTWSPASADCCTWDHLRCD-EAGRVNNVFIDGADD- 362 C D+ AL K +L P TWS + C W + CD ++GRV ++ + G + Sbjct: 27 CSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISLRGESED 86 Query: 363 -----------VRGQIPSALAGLTALMSLSL 422 + G I A+ LTAL SL L Sbjct: 87 AIFQKAGRSGYMSGSIDPAVCDLTALTSLVL 117
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 34.3 bits (77), Expect = 0.13 Identities = 24/72 (33%), Positives = 35/72 (48%) Frame = +3 Query: 207 DRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVRGQIPSA 386 D A+L +K++L NP + WS D C W H+ C RV + I G ++G + Sbjct: 28 DLSAMLSLKKSL-NPPSSFGWS--DPDPCKWTHIVCTGTKRVTRIQI-GHSGLQGTLSPD 83 Query: 387 LAGLTALMSLSL 422 L L+ L L L Sbjct: 84 LRNLSELERLEL 95
>DOT1L_HUMAN (Q8TEK3) Histone-lysine N-methyltransferase, H3 lysine-79 specific| (EC 2.1.1.43) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (DOT1-like protein) Length = 1739 Score = 29.6 bits (65), Expect = 3.3 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = -2 Query: 430 RRNSDSDMSAVSPAKADGIWPRTSSAPSMKTLFTRPASS 314 RR SA +P+ + G+ P+ + PS+ LFT+P+ S Sbjct: 1085 RRGRRKRASAGTPSLSAGVSPKRRALPSVAGLFTQPSGS 1123
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 29.3 bits (64), Expect = 4.3 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Frame = +3 Query: 270 SPASADCCTWDHLRC--DEAGRVNNVFIDGADDVRGQIPSALAGLTALMSLSLFR 428 S +S DCC W + C + GRV + + G + G++ +L L + L+L R Sbjct: 56 SSSSTDCCNWTGITCNSNNTGRVIRLEL-GNKKLSGKLSESLGKLDEIRVLNLSR 109
>CUL8_YEAST (P47050) Cullin-8| Length = 842 Score = 28.9 bits (63), Expect = 5.7 Identities = 21/64 (32%), Positives = 28/64 (43%) Frame = -2 Query: 412 DMSAVSPAKADGIWPRTSSAPSMKTLFTRPASSHRRWSHVQQSADAGDHVFSVAGLPSAC 233 DM V K + PRT+S S T R +S+H S+ Q + + L AC Sbjct: 736 DMKKVKNGKLRVVLPRTASLQSSNTGGERTSSAHHEGSNSQWTQE----------LLKAC 785 Query: 232 FTRS 221 TRS Sbjct: 786 ITRS 789
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I| Length = 536 Score = 28.5 bits (62), Expect = 7.4 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = -2 Query: 415 SDMSAVSPAKADGIWPRTSSAPSMKTLFTRPASSHRRWSHVQQSA-DAGDHVFSVAGLPS 239 S S +S + A I +SS+P + FT PASS S V S+ + S+ S Sbjct: 44 SSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSS 103 Query: 238 ACFTRSSA 215 A T SS+ Sbjct: 104 ATLTSSSS 111
>DRL39_ARATH (Q9LVT1) Putative disease resistance protein At5g47280| Length = 623 Score = 28.5 bits (62), Expect = 7.4 Identities = 12/36 (33%), Positives = 24/36 (66%) Frame = +3 Query: 327 RVNNVFIDGADDVRGQIPSALAGLTALMSLSLFRLP 434 ++ ++ ID DD+ ++PS + G+T+L S+S+ P Sbjct: 464 KLTDITIDYCDDL-AELPSTICGITSLNSISITNCP 498
>GP46_LEIAM (P21978) Surface membrane glycoprotein GP46/M-2 precursor| Length = 476 Score = 28.1 bits (61), Expect = 9.7 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 204 ADRQALLRVKQALGN--PATLKTWSPASADCCTWDHLRCDEAG 326 A ++ L V QA PA TW+ +D C+W+H+ C +G Sbjct: 41 AQQKNTLTVLQAFARAIPALGDTWT--GSDFCSWEHIICYSSG 81 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,879,222 Number of Sequences: 219361 Number of extensions: 401040 Number of successful extensions: 1578 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1541 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1574 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
