ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast28f06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, comple... 258 1e-65
2gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 compl... 236 5e-59
3ref|XM_472441.1| Oryza sativa (japonica cultivar-group), predic... 100 8e-18
4emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4,... 100 8e-18
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
6dbj|AK119714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
7dbj|AK106155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
8dbj|AK099124.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
9dbj|AK061030.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 8e-18
10emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4,... 100 8e-18
11gb|AY105615.1| Zea mays PCO070046 mRNA sequence 66 1e-07
12ref|NM_193413.1| Oryza sativa (japonica cultivar-group), predic... 50 0.006
13gb|BT013504.1| Lycopersicon esculentum clone 132192F, mRNA sequence 46 0.097
14gb|AY105648.1| Zea mays PCO074907 mRNA sequence 46 0.097
15gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswel... 42 1.5
16gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswel... 42 1.5
17gb|AC160403.5| Mus musculus 10 BAC RP24-286J14 (Roswell Park Can... 42 1.5
18dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
19dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
20dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
21dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.5
22gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 ... 42 1.5
23gb|U92042.1|CPU92042 Cryphonectria parasitica mating type 1 pher... 42 1.5
24gb|AC004333.1|AC004333 Drosophila melanogaster DNA sequence (P1 ... 42 1.5
25gb|AC153422.5| Mus musculus 10 BAC RP23-427I15 (Roswell Park Can... 42 1.5
26emb|AL806522.4| Mouse DNA sequence from clone RP23-167H2 on chro... 42 1.5
27gb|AC160856.2| Homo sapiens chromosome 2 clone WI2-3200G4, compl... 40 6.0
28gb|U70541.1|OSU70541 Oryza sativa (indica cultivar-group) putati... 40 6.0
29emb|AL390791.15| Human DNA sequence from clone RP11-204A14 on ch... 40 6.0
30gb|AC121252.4| Homo sapiens chromosome 3 clone RP11-148G20, comp... 40 6.0
31gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide... 40 6.0
32gb|AC010279.5| Homo sapiens chromosome 5 clone CTC-533D18, compl... 40 6.0
33gb|AC021735.8| Homo sapiens chromosome 18, clone RP11-107G7, com... 40 6.0
34gb|AC015670.8| Homo sapiens chromosome 18, clone RP11-21F16, com... 40 6.0
35gb|AC008387.6| Homo sapiens chromosome 5 clone CTC-229P9, comple... 40 6.0
36gb|AC153809.2| Homo sapiens chromosome 2 clone fa0884, complete ... 40 6.0
37gb|AC005923.2| Homo sapiens 3 PAC RP4-751E10 (Roswell Park Cance... 40 6.0
38gb|AC144450.2| Homo sapiens fosmid clone XXFOS-8097D7 from 2, co... 40 6.0
39emb|AL928863.14| Zebrafish DNA sequence from clone CH211-152B13,... 40 6.0
40emb|AL671898.7| Mouse DNA sequence from clone RP23-194K1 on chro... 40 6.0
41dbj|AK129581.1| Homo sapiens cDNA FLJ26070 fis, clone PRS09374 40 6.0 
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score =  258 bits (130), Expect = 1e-65
 Identities = 136/138 (98%)
 Strand = Plus / Minus

                                                                         
Query: 309   agatggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaaca 368
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 78854 agatggcaacaatgctttctcatggaactccaggcgcatgttcagttcaaatgagaaaca 78795

                                                                         
Query: 369   tctgcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccag 428
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 78794 tctgcctccaatatctgacccggaaattgagactgcatttaaggatttgatggctgccag 78735

                               
Query: 429   ctggaatgagcttccggg 446
             ||||||||||||||||||
Sbjct: 78734 ctggaatgagcttccggg 78717



 Score =  165 bits (83), Expect = 2e-37
 Identities = 86/87 (98%)
 Strand = Plus / Minus

                                                                         
Query: 1     aggcccagaatccacaaacccaacagggcctatacaaaagaaaaataaacccgaacgagt 60
             |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 80367 aggcccagaatccacaaacccaacagggcctatagaaaagaaaaataaacccgaacgagt 80308

                                        
Query: 61    tcgccagcagcccccaaagccgcaggc 87
             |||||||||||||||||||||||||||
Sbjct: 80307 tcgccagcagcccccaaagccgcaggc 80281



 Score =  155 bits (78), Expect = 1e-34
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                         
Query: 233   gcaggtcggcggcggcgggcctggcgacgcgggtgcccctgcacagcgcggcgcgcctgg 292
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80044 gcaggtcggcggcggcgggcctggcgacgcgggtgcccctgcacagcgcggcgcgcctgg 79985

                               
Query: 293   gatcctgcgtcacccgag 310
             ||||||||||||||||||
Sbjct: 79984 gatcctgcgtcacccgag 79967



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 2     ggcccagaatccacaaacccaacagggcctatacaaaagaaaaataaacccgaacgagtt 61
             |||| |||||||||||||| || ||| |||||| ||||||||||||||||||||||| ||
Sbjct: 82856 ggcctagaatccacaaaccaaataggacctatagaaaagaaaaataaacccgaacgaatt 82797

                                    
Query: 62    cgccagcagcccccaaagccgca 84
             | ||| || | ||||||||||||
Sbjct: 82796 caccaacaactcccaaagccgca 82774



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 235   aggtcggcggcggcgggcctggcgacgcgggtgcccctgcacagcgcggcg 285
             ||||||||||||| ||| |||| ||||||| |||||||||||||| |||||
Sbjct: 84178 aggtcggcggcggtgggtctggagacgcggatgcccctgcacagcacggcg 84128



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 40    gaaaaataaacccgaacgagttcgccagcagcccccaaa 78
             |||||||||||| |||||| ||||||| ||||| |||||
Sbjct: 84462 gaaaaataaacctgaacgaattcgccaacagcctccaaa 84424
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>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence
          Length = 168746

 Score =  236 bits (119), Expect = 5e-59
 Identities = 131/135 (97%)
 Strand = Plus / Minus

                                                                         
Query: 309   agatggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaaca 368
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 79825 agatggcaacaatgctttctcatggaactccaggcgcatgttcagttcaaatgagaaaca 79766

                                                                         
Query: 369   tctgcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccag 428
             ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 79765 tctgcctgcaatatctgacccgaaaattgagactgcatttaaggatttgatggctgctag 79706

                            
Query: 429   ctggaatgagcttcc 443
             |||||| ||||||||
Sbjct: 79705 ctggaacgagcttcc 79691



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                  
Query: 233   gcaggtcggcggcggcgggcctggcgacgcgggtgcccctgcacagcgcggcg 285
             ||||||||||||||||||| |||| ||||||| ||||||| ||||||||||||
Sbjct: 81028 gcaggtcggcggcggcgggtctggggacgcggatgcccctccacagcgcggcg 80976



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/44 (88%), Gaps = 2/44 (4%)
 Strand = Plus / Minus

                                                         
Query: 43    aaataaacccgaacgagttcgccagcagccc--ccaaagccgca 84
             |||||||||||||||| ||||||| || |||  |||||||||||
Sbjct: 81309 aaataaacccgaacgaattcgccaacaacccccccaaagccgca 81266
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>ref|XM_472441.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 771

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                       
Query: 312 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 371
           |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 150 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 209

                                                                       
Query: 372 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 431
           |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 210 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 269

             
Query: 432 ga 433
           ||
Sbjct: 270 ga 271
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>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16,
             complete sequence
          Length = 114051

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                         
Query: 312   tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 371
             |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 98090 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 98149

                                                                         
Query: 372   gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 431
             |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 98150 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 98209

               
Query: 432   ga 433
             ||
Sbjct: 98210 ga 98211
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                            
Query: 312      tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 371
                |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 20663656 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 20663715

                                                                            
Query: 372      gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 431
                |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 20663716 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 20663775

                  
Query: 432      ga 433
                ||
Sbjct: 20663776 ga 20663777
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>dbj|AK119714.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-F05, full
           insert sequence
          Length = 970

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                       
Query: 312 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 371
           |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 214 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 273

                                                                       
Query: 372 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 431
           |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 274 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 333

             
Query: 432 ga 433
           ||
Sbjct: 334 ga 335
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>dbj|AK106155.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-A04, full
           insert sequence
          Length = 1116

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                       
Query: 312 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 371
           |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 213 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 272

                                                                       
Query: 372 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 431
           |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 273 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 332

             
Query: 432 ga 433
           ||
Sbjct: 333 ga 334
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>dbj|AK099124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039I07, full
           insert sequence
          Length = 1007

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                       
Query: 312 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 371
           |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 199 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 258

                                                                       
Query: 372 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 431
           |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 259 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 318

             
Query: 432 ga 433
           ||
Sbjct: 319 ga 320
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>dbj|AK061030.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-H01, full
           insert sequence
          Length = 1111

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                       
Query: 312 tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 371
           |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 213 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 272

                                                                       
Query: 372 gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 431
           |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 273 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 332

             
Query: 432 ga 433
           ||
Sbjct: 333 ga 334
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>emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0108J11,
            complete sequence
          Length = 124629

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                        
Query: 312  tggcaacaatgctttctcatggaactcaaggcgcatgttcagttcaaatgagaaacatct 371
            |||||||||||| || ||||||||||  |||||| ||||||| |||||||| || |||||
Sbjct: 9807 tggcaacaatgccttttcatggaacttgaggcgcttgttcagctcaaatgaaaagcatct 9866

                                                                        
Query: 372  gcctccaatatctgacccgaaaattgagactgcatttaaggatttgatggctgccagctg 431
            |||  | |||||||||||  || ||||  |||| |||||||||||||||||||| |||||
Sbjct: 9867 gccggcgatatctgacccagaagttgaatctgcgtttaaggatttgatggctgctagctg 9926

              
Query: 432  ga 433
            ||
Sbjct: 9927 ga 9928
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>gb|AY105615.1| Zea mays PCO070046 mRNA sequence
          Length = 1106

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                       
Query: 351 cagttcaaatgagaaacatctgcctccaatatctgacccgaaaattgagactgcatttaa 410
           |||||||||||| |||||  ||||  |||||||||| ||  |||| ||  ||||||||||
Sbjct: 267 cagttcaaatgaaaaacacttgcccgcaatatctgatccagaaatagaatctgcatttaa 326

                                            
Query: 411 ggatttgatggctgccagctggaatgagcttcc 443
           ||||||| ||||||| || |||||||| |||||
Sbjct: 327 ggatttgttggctgctagttggaatgaacttcc 359
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>ref|NM_193413.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 282

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 226 atcctccgcaggtcggcggcggcgg 250
           |||||||||||||||||||||||||
Sbjct: 124 atcctccgcaggtcggcggcggcgg 148



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 247 gcgggcctggcgacgcgggtgcccctgcacagcgcgg 283
           ||||| |||| ||||| | ||||||||||||||||||
Sbjct: 154 gcggggctggagacgctgatgcccctgcacagcgcgg 190
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>gb|BT013504.1| Lycopersicon esculentum clone 132192F, mRNA sequence
          Length = 1056

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 406 tttaaggatttgatggctgccagctggaatgagct 440
           |||||||| ||||||||||| |||||| |||||||
Sbjct: 374 tttaaggacttgatggctgcaagctgggatgagct 408
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>gb|AY105648.1| Zea mays PCO074907 mRNA sequence
          Length = 556

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 224 ggatcctccgcaggtcggcggcggcgg 250
           |||||||||||||||||||||| ||||
Sbjct: 174 ggatcctccgcaggtcggcggccgcgg 200
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>gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 172175

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 306    ccgagatggcaacaatgcttt 326
              |||||||||||||||||||||
Sbjct: 155462 ccgagatggcaacaatgcttt 155482
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>gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 166862

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 306   ccgagatggcaacaatgcttt 326
             |||||||||||||||||||||
Sbjct: 39292 ccgagatggcaacaatgcttt 39272
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>gb|AC160403.5| Mus musculus 10 BAC RP24-286J14 (Roswell Park Cancer Institute
           (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 180869

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 352 agttcaaatgagaaacatctg 372
           |||||||||||||||||||||
Sbjct: 837 agttcaaatgagaaacatctg 857
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 247      gcgggcctggcgacgcgggtgcccctgcacagcgcgg 283
                ||||| |||| ||||| | ||||||||||||||||||
Sbjct: 20697028 gcggggctggagacgctgatgcccctgcacagcgcgg 20697064
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>dbj|AP003933.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0066C06
          Length = 162304

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 247   gcgggcctggcgacgcgggtgcccctgcacagcgcgg 283
             ||||| |||| ||||| | ||||||||||||||||||
Sbjct: 39986 gcggggctggagacgctgatgcccctgcacagcgcgg 40022
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>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0024F24
          Length = 172642

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 247    gcgggcctggcgacgcgggtgcccctgcacagcgcgg 283
              ||||| |||| ||||| | ||||||||||||||||||
Sbjct: 159004 gcggggctggagacgctgatgcccctgcacagcgcgg 159040
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 233     gcaggtcggcggcggcgggcc 253
               |||||||||||||||||||||
Sbjct: 1934531 gcaggtcggcggcggcgggcc 1934511



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     ggtcggcggcggcgggcctg 255
               ||||||||||||||||||||
Sbjct: 1076845 ggtcggcggcggcgggcctg 1076864
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>gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 of 83 of the complete
             sequence
          Length = 303191

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 306   ccgagatggcaacaatgcttt 326
             |||||||||||||||||||||
Sbjct: 30679 ccgagatggcaacaatgcttt 30659
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>gb|U92042.1|CPU92042 Cryphonectria parasitica mating type 1 pheromone precursor (mf1-1)
            gene, complete cds
          Length = 3412

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 239  cggcggcggcgggcctggcgacgcgggtg 267
            ||||||||||||| |||||| ||||||||
Sbjct: 1917 cggcggcggcggggctggcgtcgcgggtg 1889
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>gb|AC004333.1|AC004333 Drosophila melanogaster DNA sequence (P1 DS05969 (D229)), complete
            sequence
          Length = 63178

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 306  ccgagatggcaacaatgcttt 326
            |||||||||||||||||||||
Sbjct: 2475 ccgagatggcaacaatgcttt 2495
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>gb|AC153422.5| Mus musculus 10 BAC RP23-427I15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 197906

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 352   agttcaaatgagaaacatctg 372
             |||||||||||||||||||||
Sbjct: 37299 agttcaaatgagaaacatctg 37279
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>emb|AL806522.4| Mouse DNA sequence from clone RP23-167H2 on chromosome 2, complete
             sequence
          Length = 189104

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 346   atgttcagttcaaatgagaaa 366
             |||||||||||||||||||||
Sbjct: 53759 atgttcagttcaaatgagaaa 53779
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>gb|AC160856.2| Homo sapiens chromosome 2 clone WI2-3200G4, complete sequence
          Length = 40756

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 287  gcctgggatcctgcgtcacccgag 310
            |||||||||||||| |||||||||
Sbjct: 8098 gcctgggatcctgcatcacccgag 8121
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>gb|U70541.1|OSU70541 Oryza sativa (indica cultivar-group) putative ADP-glucose
             pyrophosphorylase subunit SH2 and putative NADPH-dependent
             reductase A1 genes, complete cds
          Length = 30034

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    agaaaaataaacccgaacga 58
             ||||||||||||||||||||
Sbjct: 18777 agaaaaataaacccgaacga 18796
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>emb|AL390791.15| Human DNA sequence from clone RP11-204A14 on chromosome 9, complete
              sequence
          Length = 177425

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     tacaaaagaaaaataaaccc 52
              ||||||||||||||||||||
Sbjct: 119850 tacaaaagaaaaataaaccc 119869
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>gb|AC121252.4| Homo sapiens chromosome 3 clone RP11-148G20, complete sequence
          Length = 105166

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 390   gaaaattgagactgcatttaaggatttg 417
             ||||||||||| || |||||||||||||
Sbjct: 44615 gaaaattgagagtgaatttaaggatttg 44588
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>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145
             biosynthetic gene cluster, complete sequence
          Length = 126933

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   tccgcaggtcggcggcggcg 249
             ||||||||||||||||||||
Sbjct: 30707 tccgcaggtcggcggcggcg 30688
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>gb|AC010279.5| Homo sapiens chromosome 5 clone CTC-533D18, complete sequence
          Length = 125746

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     ctatacaaaagaaaaataaa 49
              ||||||||||||||||||||
Sbjct: 105523 ctatacaaaagaaaaataaa 105504
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>gb|AC021735.8| Homo sapiens chromosome 18, clone RP11-107G7, complete sequence
          Length = 170510

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     tatacaaaagaaaaataaac 50
              ||||||||||||||||||||
Sbjct: 143272 tatacaaaagaaaaataaac 143253
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>gb|AC015670.8| Homo sapiens chromosome 18, clone RP11-21F16, complete sequence
          Length = 150187

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   tatacaaaagaaaaataaac 50
            ||||||||||||||||||||
Sbjct: 3818 tatacaaaagaaaaataaac 3799
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>gb|AC008387.6| Homo sapiens chromosome 5 clone CTC-229P9, complete sequence
          Length = 142715

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    ctatacaaaagaaaaataaa 49
             ||||||||||||||||||||
Sbjct: 19409 ctatacaaaagaaaaataaa 19390
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>gb|AC153809.2| Homo sapiens chromosome 2 clone fa0884, complete sequence
          Length = 20593

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 287   gcctgggatcctgcgtcacccgag 310
             |||||||||||||| |||||||||
Sbjct: 13494 gcctgggatcctgcatcacccgag 13471
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>gb|AC005923.2| Homo sapiens 3 PAC RP4-751E10 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 88326

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 390   gaaaattgagactgcatttaaggatttg 417
             ||||||||||| || |||||||||||||
Sbjct: 64313 gaaaattgagagtgaatttaaggatttg 64340
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>gb|AC144450.2| Homo sapiens fosmid clone XXFOS-8097D7 from 2, complete sequence
          Length = 17376

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 287   gcctgggatcctgcgtcacccgag 310
             |||||||||||||| |||||||||
Sbjct: 10372 gcctgggatcctgcatcacccgag 10395
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>emb|AL928863.14| Zebrafish DNA sequence from clone CH211-152B13, complete sequence
          Length = 142564

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 7     agaatccacaaacccaacag 26
             ||||||||||||||||||||
Sbjct: 12411 agaatccacaaacccaacag 12430
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>emb|AL671898.7| Mouse DNA sequence from clone RP23-194K1 on chromosome X, complete
             sequence
          Length = 212406

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 366   acatctgcctccaatatctg 385
             ||||||||||||||||||||
Sbjct: 95288 acatctgcctccaatatctg 95307
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>dbj|AK129581.1| Homo sapiens cDNA FLJ26070 fis, clone PRS09374
          Length = 1646

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 287 gcctgggatcctgcgtcacccgag 310
           |||||||||||||| |||||||||
Sbjct: 459 gcctgggatcctgcatcacccgag 482


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,706,419
Number of Sequences: 3902068
Number of extensions: 3706419
Number of successful extensions: 99033
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98633
Number of HSP's gapped (non-prelim): 400
length of query: 446
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 424
effective length of database: 17,147,199,772
effective search space: 7270412703328
effective search space used: 7270412703328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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