>WRK26_ARATH (Q9C5T3) Probable WRKY transcription factor 26 (WRKY DNA-binding|
           protein 26) (SPF1-like protein)
          Length = 309

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 21/31 (67%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = +1

Query: 340 GMNLADFLDSPVLLTSS-IFPSPTTGAFGTQ 429
           G+  ADFLDSP+L TSS I PSPTTG F  Q
Sbjct: 34  GLTPADFLDSPLLFTSSNILPSPTTGTFPAQ 64

>NUP62_RAT (P17955) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)|
          Length = 525

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +1

Query: 73  SKTAVASRNAHARDFGSEPSPMTTSSSGSVETSANSRPGSFSFGSAS 213
           S TA     A+   FG   S +T + SG+  +S  + P  F FGS++
Sbjct: 101 SSTAATPATANTGSFGLGSSTLTNAISGASTSSQGTAPTGFVFGSST 147

>WRK25_ARATH (O22921) Probable WRKY transcription factor 25 (WRKY DNA-binding|
           protein 25)
          Length = 393

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/27 (59%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = +1

Query: 352 ADFLDSPVLLTSS-IFPSPTTGAFGTQ 429
           +D+LDSP+LL+SS    SPTTG F  Q
Sbjct: 66  SDYLDSPLLLSSSHSLISPTTGTFPLQ 92

>POL_SIVMK (P05897) Pol polyprotein [Contains: Protease (Retropepsin) (EC|
           3.4.23.-); Reverse transcriptase/ribonuclease H (EC
           2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)]
          Length = 1054

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 14/42 (33%), Positives = 16/42 (38%)
 Frame = -3

Query: 458 GAGASGRQLNCVPNAPVVGEGKILEVRSTGESRKSARFMPAG 333
           G+ ASG   NC P  P  G  K L        RK    +  G
Sbjct: 58  GSSASGADANCSPRGPSCGSAKELHAVGQAAERKQREALQGG 99

>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +1

Query: 115  FGSEPSPMTTSSSGSV--ETSANSRPGSFSFGSAS 213
            FG   S   TS+SGSV    S+ S   SFSFG +S
Sbjct: 1756 FGQPASSTPTSTSGSVFGAASSTSSSSSFSFGQSS 1790

>JHD1_USTMA (Q4P5U1) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 669

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = +1

Query: 67  RTSKTAVASRNAHARDFGSEPSPMTTSSSGSVETSA 174
           R S    AS +AH R   S P   TTS   S+  SA
Sbjct: 9   RVSDPLAASSSAHPRTLRSSPRKRTTSHDSSISPSA 44


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.125    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,333,976
Number of Sequences: 219361
Number of extensions: 487580
Number of successful extensions: 1398
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)