ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast27f06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107832.1| Zea mays PCO079325 mRNA sequence Length = 1165 Score = 182 bits (92), Expect = 6e-43 Identities = 149/168 (88%) Strand = Plus / Plus Query: 114 aagatccggtggggggagctcgaggaggacgacgggggcgacctcgacttcctgctgccg 173 |||||||||||||||||||| ||||||||||| || || |||||||| ||||| || ||| Sbjct: 95 aagatccggtggggggagctggaggaggacgatggcggggacctcgatttcctcctcccg 154 Query: 174 ccgcgggtcgtcatcgggcccgacgagaacggcttcaagaaaacgatcgagtaccgcttc 233 || || |||||| |||| ||||||||||||||| ||||||| ||||||||||||||| Sbjct: 155 ccccgcgtcgtcgtcggacccgacgagaacggcctcaagaaggtcatcgagtaccgcttc 214 Query: 234 gacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtccgc 281 ||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 215 gacgacgacggcaacaaggtccgggtcacgaccaccacccgcgtccgc 262 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 378 ctcaccgtcgtctccaccgaggagatcct 406 |||||| | |||||||||||||||||||| Sbjct: 356 ctcaccatggtctccaccgaggagatcct 384
>gb|BT019012.1| Zea mays clone Contig505.F mRNA sequence Length = 1140 Score = 174 bits (88), Expect = 1e-40 Identities = 148/168 (88%) Strand = Plus / Plus Query: 114 aagatccggtggggggagctcgaggaggacgacgggggcgacctcgacttcctgctgccg 173 |||||||||||||||||||| ||||||||||| || || |||||||| ||||| || ||| Sbjct: 69 aagatccggtggggggagctggaggaggacgatggcggggacctcgatttcctcctcccg 128 Query: 174 ccgcgggtcgtcatcgggcccgacgagaacggcttcaagaaaacgatcgagtaccgcttc 233 || || ||||| |||| ||||||||||||||| ||||||| ||||||||||||||| Sbjct: 129 ccccgcgtcgtggtcggacccgacgagaacggcctcaagaaggtcatcgagtaccgcttc 188 Query: 234 gacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtccgc 281 ||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 189 gacgacgacggcaacaaggtccgggtcacgaccaccacccgcgtccgc 236 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 378 ctcaccgtcgtctccaccgaggagatcct 406 |||||| | |||||||||||||||||||| Sbjct: 330 ctcaccatggtctccaccgaggagatcct 358
>ref|XM_468182.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1150 Score = 143 bits (72), Expect = 5e-31 Identities = 144/168 (85%) Strand = Plus / Plus Query: 114 aagatccggtggggggagctcgaggaggacgacgggggcgacctcgacttcctgctgccg 173 |||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||| Sbjct: 119 aagatcaggtggggagagctcgaggaggacgacgagggggacctcgacttcctgctcccg 178 Query: 174 ccgcgggtcgtcatcgggcccgacgagaacggcttcaagaaaacgatcgagtaccgcttc 233 ||||| || ||| ||||||||||||||| || |||||||| | ||||||| |||||| Sbjct: 179 ccgcgcgtggtctccgggcccgacgagaatgggttcaagaaggtggtcgagtatcgcttc 238 Query: 234 gacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtccgc 281 |||||| | || |||||||| |||||||||| ||| |||||||||| Sbjct: 239 gacgacaaggggaacaaggtgaaggtcaccaggaccttccgcgtccgc 286 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 300 ctctccaaggccgccgtcgagcgccgctcctggggcaagttcggcgacgccg 351 ||||||||| |||| ||||||||||||| ||| ||||||||||||||||| Sbjct: 305 ctctccaagagcgccatcgagcgccgctcgtggcccaagttcggcgacgccg 356
>ref|XM_507016.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0054K20.22 mRNA Length = 1154 Score = 143 bits (72), Expect = 5e-31 Identities = 144/168 (85%) Strand = Plus / Plus Query: 114 aagatccggtggggggagctcgaggaggacgacgggggcgacctcgacttcctgctgccg 173 |||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||| Sbjct: 135 aagatcaggtggggagagctcgaggaggacgacgagggggacctcgacttcctgctcccg 194 Query: 174 ccgcgggtcgtcatcgggcccgacgagaacggcttcaagaaaacgatcgagtaccgcttc 233 ||||| || ||| ||||||||||||||| || |||||||| | ||||||| |||||| Sbjct: 195 ccgcgcgtggtctccgggcccgacgagaatgggttcaagaaggtggtcgagtatcgcttc 254 Query: 234 gacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtccgc 281 |||||| | || |||||||| |||||||||| ||| |||||||||| Sbjct: 255 gacgacaaggggaacaaggtgaaggtcaccaggaccttccgcgtccgc 302 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 300 ctctccaaggccgccgtcgagcgccgctcctggggcaagttcggcgacgccg 351 ||||||||| |||| ||||||||||||| ||| ||||||||||||||||| Sbjct: 321 ctctccaagagcgccatcgagcgccgctcgtggcccaagttcggcgacgccg 372
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 143 bits (72), Expect = 5e-31 Identities = 144/168 (85%) Strand = Plus / Plus Query: 114 aagatccggtggggggagctcgaggaggacgacgggggcgacctcgacttcctgctgccg 173 |||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||| Sbjct: 33512047 aagatcaggtggggagagctcgaggaggacgacgagggggacctcgacttcctgctcccg 33512106 Query: 174 ccgcgggtcgtcatcgggcccgacgagaacggcttcaagaaaacgatcgagtaccgcttc 233 ||||| || ||| ||||||||||||||| || |||||||| | ||||||| |||||| Sbjct: 33512107 ccgcgcgtggtctccgggcccgacgagaatgggttcaagaaggtggtcgagtatcgcttc 33512166 Query: 234 gacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtccgc 281 |||||| | || |||||||| |||||||||| ||| |||||||||| Sbjct: 33512167 gacgacaaggggaacaaggtgaaggtcaccaggaccttccgcgtccgc 33512214 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 311 cgccgtcgagcgccgctcctggggcaagttcggcgacgccgccagcggcgacgacgcctc 370 ||||| |||||||||| ||||| |||||||||||||||||| | |||||||||| Sbjct: 33510353 cgccgccgagcgccgcggctgggccaagttcggcgacgccgcgcacaacgacgacgccgg 33510412 Query: 371 cgcgcgcctcaccgtcgtctccaccgaggagatc 404 ||||||||||||||| |||||| ||||||||||| Sbjct: 33510413 cgcgcgcctcaccgtggtctcccccgaggagatc 33510446 Score = 60.0 bits (30), Expect = 6e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 183 gtcatcgggcccgacgagaacggcttcaagaaaacgatcgagtaccgcttcgacgacgac 242 ||||||||||| ||||||||||| |||||||||| |||||||||| || |||| || Sbjct: 33510225 gtcatcgggccggacgagaacgggatcaagaaaaccgtcgagtaccggctcaacgaggag 33510284 Query: 243 ggcaacaaggtcaaggtcaccaccaccacccgcgtccgcgag 284 || || ||| ||| |||||||||||||||||||||||| Sbjct: 33510285 gggaaagcggtgcgggtgaccaccaccacccgcgtccgcgag 33510326 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 300 ctctccaaggccgccgtcgagcgccgctcctggggcaagttcggcgacgccg 351 ||||||||| |||| ||||||||||||| ||| ||||||||||||||||| Sbjct: 33512233 ctctccaagagcgccatcgagcgccgctcgtggcccaagttcggcgacgccg 33512284 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 220 tcgagtaccgcttcgacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtcc 279 |||||||||||||| |||| || || || ||| ||||| ||||||||||||||||||| Sbjct: 18793223 tcgagtaccgcttcaacgaggatgggaaagcggtgaaggtgaccaccaccacccgcgtcc 18793282 Query: 280 g 280 | Sbjct: 18793283 g 18793283 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 ggagctcgaggaggacgacg 147 |||||||||||||||||||| Sbjct: 5181515 ggagctcgaggaggacgacg 5181496
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 143 bits (72), Expect = 5e-31 Identities = 144/168 (85%) Strand = Plus / Plus Query: 114 aagatccggtggggggagctcgaggaggacgacgggggcgacctcgacttcctgctgccg 173 |||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||| Sbjct: 86922 aagatcaggtggggagagctcgaggaggacgacgagggggacctcgacttcctgctcccg 86981 Query: 174 ccgcgggtcgtcatcgggcccgacgagaacggcttcaagaaaacgatcgagtaccgcttc 233 ||||| || ||| ||||||||||||||| || |||||||| | ||||||| |||||| Sbjct: 86982 ccgcgcgtggtctccgggcccgacgagaatgggttcaagaaggtggtcgagtatcgcttc 87041 Query: 234 gacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtccgc 281 |||||| | || |||||||| |||||||||| ||| |||||||||| Sbjct: 87042 gacgacaaggggaacaaggtgaaggtcaccaggaccttccgcgtccgc 87089 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 311 cgccgtcgagcgccgctcctggggcaagttcggcgacgccgccagcggcgacgacgcctc 370 ||||| |||||||||| ||||| |||||||||||||||||| | |||||||||| Sbjct: 85228 cgccgccgagcgccgcggctgggccaagttcggcgacgccgcgcacaacgacgacgccgg 85287 Query: 371 cgcgcgcctcaccgtcgtctccaccgaggagatc 404 ||||||||||||||| |||||| ||||||||||| Sbjct: 85288 cgcgcgcctcaccgtggtctcccccgaggagatc 85321 Score = 60.0 bits (30), Expect = 6e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 183 gtcatcgggcccgacgagaacggcttcaagaaaacgatcgagtaccgcttcgacgacgac 242 ||||||||||| ||||||||||| |||||||||| |||||||||| || |||| || Sbjct: 85100 gtcatcgggccggacgagaacgggatcaagaaaaccgtcgagtaccggctcaacgaggag 85159 Query: 243 ggcaacaaggtcaaggtcaccaccaccacccgcgtccgcgag 284 || || ||| ||| |||||||||||||||||||||||| Sbjct: 85160 gggaaagcggtgcgggtgaccaccaccacccgcgtccgcgag 85201 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 300 ctctccaaggccgccgtcgagcgccgctcctggggcaagttcggcgacgccg 351 ||||||||| |||| ||||||||||||| ||| ||||||||||||||||| Sbjct: 87108 ctctccaagagcgccatcgagcgccgctcgtggcccaagttcggcgacgccg 87159
>dbj|AK103497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131A11, full insert sequence Length = 1154 Score = 143 bits (72), Expect = 5e-31 Identities = 144/168 (85%) Strand = Plus / Plus Query: 114 aagatccggtggggggagctcgaggaggacgacgggggcgacctcgacttcctgctgccg 173 |||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||| Sbjct: 135 aagatcaggtggggagagctcgaggaggacgacgagggggacctcgacttcctgctcccg 194 Query: 174 ccgcgggtcgtcatcgggcccgacgagaacggcttcaagaaaacgatcgagtaccgcttc 233 ||||| || ||| ||||||||||||||| || |||||||| | ||||||| |||||| Sbjct: 195 ccgcgcgtggtctccgggcccgacgagaatgggttcaagaaggtggtcgagtatcgcttc 254 Query: 234 gacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtccgc 281 |||||| | || |||||||| |||||||||| ||| |||||||||| Sbjct: 255 gacgacaaggggaacaaggtgaaggtcaccaggaccttccgcgtccgc 302 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 300 ctctccaaggccgccgtcgagcgccgctcctggggcaagttcggcgacgccg 351 ||||||||| |||| ||||||||||||| ||| ||||||||||||||||| Sbjct: 321 ctctccaagagcgccatcgagcgccgctcgtggcccaagttcggcgacgccg 372
>dbj|AK060351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-F12, full insert sequence Length = 1150 Score = 143 bits (72), Expect = 5e-31 Identities = 144/168 (85%) Strand = Plus / Plus Query: 114 aagatccggtggggggagctcgaggaggacgacgggggcgacctcgacttcctgctgccg 173 |||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||| Sbjct: 119 aagatcaggtggggagagctcgaggaggacgacgagggggacctcgacttcctgctcccg 178 Query: 174 ccgcgggtcgtcatcgggcccgacgagaacggcttcaagaaaacgatcgagtaccgcttc 233 ||||| || ||| ||||||||||||||| || |||||||| | ||||||| |||||| Sbjct: 179 ccgcgcgtggtctccgggcccgacgagaatgggttcaagaaggtggtcgagtatcgcttc 238 Query: 234 gacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtccgc 281 |||||| | || |||||||| |||||||||| ||| |||||||||| Sbjct: 239 gacgacaaggggaacaaggtgaaggtcaccaggaccttccgcgtccgc 286 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 300 ctctccaaggccgccgtcgagcgccgctcctggggcaagttcggcgacgccg 351 ||||||||| |||| ||||||||||||| ||| ||||||||||||||||| Sbjct: 305 ctctccaagagcgccatcgagcgccgctcgtggcccaagttcggcgacgccg 356
>ref|XM_468181.1| Oryza sativa (japonica cultivar-group), mRNA Length = 870 Score = 83.8 bits (42), Expect = 4e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 311 cgccgtcgagcgccgctcctggggcaagttcggcgacgccgccagcggcgacgacgcctc 370 ||||| |||||||||| ||||| |||||||||||||||||| | |||||||||| Sbjct: 246 cgccgccgagcgccgcggctgggccaagttcggcgacgccgcgcacaacgacgacgccgg 305 Query: 371 cgcgcgcctcaccgtcgtctccaccgaggagatc 404 ||||||||||||||| |||||| ||||||||||| Sbjct: 306 cgcgcgcctcaccgtggtctcccccgaggagatc 339 Score = 60.0 bits (30), Expect = 6e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 183 gtcatcgggcccgacgagaacggcttcaagaaaacgatcgagtaccgcttcgacgacgac 242 ||||||||||| ||||||||||| |||||||||| |||||||||| || |||| || Sbjct: 118 gtcatcgggccggacgagaacgggatcaagaaaaccgtcgagtaccggctcaacgaggag 177 Query: 243 ggcaacaaggtcaaggtcaccaccaccacccgcgtccgcgag 284 || || ||| ||| |||||||||||||||||||||||| Sbjct: 178 gggaaagcggtgcgggtgaccaccaccacccgcgtccgcgag 219
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 311 cgccgtcgagcgccgctcctggggcaagttcggcgacgccgc 352 |||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 102648 cgccgtcgagcgccgcggctgggccaagttcggcgccgccgc 102689 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Plus Query: 164 cctgctgccgccgcgggtcgtcatcgggcccgacgagaacgg 205 |||||| || ||||| || ||||||||||| ||||||||||| Sbjct: 102509 cctgctcccaccgcgcgtggtcatcgggccggacgagaacgg 102550 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 220 tcgagtaccgcttcgacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtcc 279 |||||||||||||| |||| || || || ||| ||||| |||||||||||||| |||| Sbjct: 102557 tcgagtaccgcttcaacgaggaggggaaagtggtgaaggtgaccaccaccacccgtgtcc 102616 Query: 280 g 280 | Sbjct: 102617 g 102617
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 311 cgccgtcgagcgccgctcctggggcaagttcggcgacgccgc 352 |||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 21103058 cgccgtcgagcgccgcggctgggccaagttcggcgccgccgc 21103017 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Minus Query: 164 cctgctgccgccgcgggtcgtcatcgggcccgacgagaacgg 205 |||||| || ||||| || ||||||||||| ||||||||||| Sbjct: 21103197 cctgctcccaccgcgcgtggtcatcgggccggacgagaacgg 21103156 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 220 tcgagtaccgcttcgacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtcc 279 |||||||||||||| |||| || || || ||| ||||| |||||||||||||| |||| Sbjct: 21103149 tcgagtaccgcttcaacgaggaggggaaagtggtgaaggtgaccaccaccacccgtgtcc 21103090 Query: 280 g 280 | Sbjct: 21103089 g 21103089 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ggagctcgaggaggacgacg 147 |||||||||||||||||||| Sbjct: 14888927 ggagctcgaggaggacgacg 14888946
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 311 cgccgtcgagcgccgctcctggggcaagttcggcgacgccgc 352 |||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 21114322 cgccgtcgagcgccgcggctgggccaagttcggcgccgccgc 21114281 Score = 44.1 bits (22), Expect = 0.35 Identities = 37/42 (88%) Strand = Plus / Minus Query: 164 cctgctgccgccgcgggtcgtcatcgggcccgacgagaacgg 205 |||||| || ||||| || ||||||||||| ||||||||||| Sbjct: 21114461 cctgctcccaccgcgcgtggtcatcgggccggacgagaacgg 21114420 Score = 42.1 bits (21), Expect = 1.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 220 tcgagtaccgcttcgacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtcc 279 |||||||||||||| |||| || || || ||| ||||| |||||||||||||| |||| Sbjct: 21114413 tcgagtaccgcttcaacgaggaggggaaagtggtgaaggtgaccaccaccacccgtgtcc 21114354 Query: 280 g 280 | Sbjct: 21114353 g 21114353 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ggagctcgaggaggacgacg 147 |||||||||||||||||||| Sbjct: 14897168 ggagctcgaggaggacgacg 14897187
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 225 taccgcttcgacgacgacggcaacaaggt 253 ||||||||||||||||| ||||||||||| Sbjct: 55785 taccgcttcgacgacgagggcaacaaggt 55813
>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0071O21 Length = 158410 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 220 tcgagtaccgcttcgacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtcc 279 |||||||||||||| |||| || || || ||| ||||| ||||||||||||||||||| Sbjct: 135865 tcgagtaccgcttcaacgaggatgggaaagcggtgaaggtgaccaccaccacccgcgtcc 135924 Query: 280 g 280 | Sbjct: 135925 g 135925
>dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0004O05 Length = 140513 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 220 tcgagtaccgcttcgacgacgacggcaacaaggtcaaggtcaccaccaccacccgcgtcc 279 |||||||||||||| |||| || || || ||| ||||| ||||||||||||||||||| Sbjct: 38588 tcgagtaccgcttcaacgaggatgggaaagcggtgaaggtgaccaccaccacccgcgtcc 38647 Query: 280 g 280 | Sbjct: 38648 g 38648
>ref|XM_750227.1| Aspergillus fumigatus Af293 eukaryotic translation initiation factor 3 subunit EifCg (Afu2g09870) partial mRNA Length = 873 Score = 46.1 bits (23), Expect = 0.088 Identities = 35/39 (89%) Strand = Plus / Plus Query: 225 taccgcttcgacgacgacggcaacaaggtcaaggtcacc 263 ||||||||| |||| || ||||| ||||||||||||||| Sbjct: 121 taccgcttcaacgatgagggcaagaaggtcaaggtcacc 159
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Minus Query: 341 cggcgacgccgccagcggcgacgacgc 367 |||||||||||||||| |||||||||| Sbjct: 1641858 cggcgacgccgccagccgcgacgacgc 1641832
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 225 taccgcttcgacgacgacggcaacaag 251 ||||||||||||||||| ||||||||| Sbjct: 5993252 taccgcttcgacgacgagggcaacaag 5993278
>ref|XM_388107.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07931.1) partial mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 383 cgtcgtctccaccgaggagatc 404 |||||||||||||||||||||| Sbjct: 814 cgtcgtctccaccgaggagatc 793
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 125 gggggagctcgaggaggacgacgggggcg 153 ||||||| ||||||||||||||| ||||| Sbjct: 422561 gggggaggtcgaggaggacgacgcgggcg 422533
>ref|XM_958294.1| Neurospora crassa OR74A hypothetical protein (NCU09623.1) partial mRNA Length = 534 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 accgcttcgacgacgacggca 246 ||||||||||||||||||||| Sbjct: 395 accgcttcgacgacgacggca 415
>ref|XM_330272.1| Neurospora crassa OR74A hypothetical protein (NCU09623.1) partial mRNA Length = 534 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 accgcttcgacgacgacggca 246 ||||||||||||||||||||| Sbjct: 395 accgcttcgacgacgacggca 415
>gb|AC009119.10| Homo sapiens chromosome 16 clone RP11-483P21, complete sequence Length = 181020 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 tcaaggtcaccaccaccaccc 273 ||||||||||||||||||||| Sbjct: 129657 tcaaggtcaccaccaccaccc 129677
>emb|AL590627.25| Human DNA sequence from clone RP13-467E5 on chromosome 9 Contains a pseudogene similar to part of SET translocation (myeloid leukemia-associated) (SET), the 5' end of the gene for euchromatic histone methyltransferase 1 (FLJ12879, KIAA1876) (Eu-HMTase1) and two CpG islands, complete sequence Length = 166141 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ggagctcgaggaggacgacgg 148 ||||||||||||||||||||| Sbjct: 124588 ggagctcgaggaggacgacgg 124608
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 caaggccgccgtcgagcgccg 325 ||||||||||||||||||||| Sbjct: 479304 caaggccgccgtcgagcgccg 479284
>emb|Z99123.2|BSUB0020 Bacillus subtilis complete genome (section 20 of 21): from 3809641 to 4010779 Length = 201139 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 acagccatgccggcggacgcc 113 ||||||||||||||||||||| Sbjct: 119137 acagccatgccggcggacgcc 119157
>emb|X73124.1|BSGENR B.subtilis genomic region (325 to 333) Length = 97015 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 acagccatgccggcggacgcc 113 ||||||||||||||||||||| Sbjct: 27809 acagccatgccggcggacgcc 27789
>gb|BC047504.1| Homo sapiens euchromatic histone-lysine N-methyltransferase 1, mRNA (cDNA clone MGC:50973 IMAGE:5298029), complete cds Length = 2721 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ggagctcgaggaggacgacgg 148 ||||||||||||||||||||| Sbjct: 1099 ggagctcgaggaggacgacgg 1119
>emb|AL355931.1|NCB3E4 Neurospora crassa DNA linkage group II BAC clone B3E4 Length = 62421 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 accgcttcgacgacgacggca 246 ||||||||||||||||||||| Sbjct: 37871 accgcttcgacgacgacggca 37891
>gb|AC108726.9| Homo sapiens 3 BAC RP11-385G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 36019 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 agcgccccagcgagcgagcgagcga 93 |||||| |||||||||||||||||| Sbjct: 9505 agcgccacagcgagcgagcgagcga 9529
>dbj|AK128165.1| Homo sapiens cDNA FLJ46288 fis, clone TESTI4032834, moderately similar to Homo sapiens trinucleotide repeat containing 11 (THR-associated protein, 230kDa subunit) (TNRC11) Length = 3008 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 agcgccccagcgagcgagcgagcga 93 |||||| |||||||||||||||||| Sbjct: 272 agcgccacagcgagcgagcgagcga 296
>dbj|AK022941.1| Homo sapiens cDNA FLJ12879 fis, clone NT2RP2003857, weakly similar to MYOTROPHIN Length = 2656 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ggagctcgaggaggacgacgg 148 ||||||||||||||||||||| Sbjct: 1014 ggagctcgaggaggacgacgg 1034
>gb|AY083210.1| Homo sapiens euchromatic histone methyltransferase 1 mRNA, complete cds Length = 3804 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ggagctcgaggaggacgacgg 148 ||||||||||||||||||||| Sbjct: 969 ggagctcgaggaggacgacgg 989
>ref|NM_024757.3| Homo sapiens euchromatic histone-lysine N-methyltransferase 1 (EHMT1), mRNA Length = 5067 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ggagctcgaggaggacgacgg 148 ||||||||||||||||||||| Sbjct: 1043 ggagctcgaggaggacgacgg 1063
>gb|AF411849.1|AF411849S1 Homo sapiens USH3 region, partial sequence Length = 198334 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 agcgccccagcgagcgagcgagcga 93 |||||| |||||||||||||||||| Sbjct: 78192 agcgccacagcgagcgagcgagcga 78216
>gb|AC099670.2| Homo sapiens chromosome 1 clone RP11-84O12, complete sequence Length = 171226 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 127 gggagctcgaggaggacgacggggg 151 |||||||||||||||| |||||||| Sbjct: 151464 gggagctcgaggaggaggacggggg 151488
>gb|AC009036.7| Homo sapiens chromosome 16 clone RP11-142L23, complete sequence Length = 193790 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 253 tcaaggtcaccaccaccaccc 273 ||||||||||||||||||||| Sbjct: 192746 tcaaggtcaccaccaccaccc 192766
>gb|AF388365.1|AF388365 Homo sapiens NOPAR2 mRNA, complete cds Length = 2862 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 agcgccccagcgagcgagcgagcga 93 |||||| |||||||||||||||||| Sbjct: 403 agcgccacagcgagcgagcgagcga 427
>gb|AF388364.1|AF388364 Homo sapiens NOPAR mRNA, complete cds Length = 2757 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 69 agcgccccagcgagcgagcgagcga 93 |||||| |||||||||||||||||| Sbjct: 403 agcgccacagcgagcgagcgagcga 427
>gb|S51329.1| AAVS1=adeno-associated virus integration site [human, Genomic, 4067 nt] Length = 4067 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 cccagcgagcgagcgagcgac 94 ||||||||||||||||||||| Sbjct: 422 cccagcgagcgagcgagcgac 402
>gb|BC025772.1| Homo sapiens euchromatic histone-lysine N-methyltransferase 1, mRNA (cDNA clone IMAGE:5209740), containing frame-shift errors Length = 1124 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ggagctcgaggaggacgacgg 148 ||||||||||||||||||||| Sbjct: 1089 ggagctcgaggaggacgacgg 1109
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagcgagcgagcgagcga 93 ||||||||||||||||||||| Sbjct: 38065400 ccccagcgagcgagcgagcga 38065420 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cccagcgagcgagcgagcga 93 |||||||||||||||||||| Sbjct: 22095727 cccagcgagcgagcgagcga 22095746
>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0471B04 Length = 138025 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagcgagcgagcgagcga 93 ||||||||||||||||||||| Sbjct: 33434 ccccagcgagcgagcgagcga 33454
>dbj|AK106754.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-D04, full insert sequence Length = 1756 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ccccagcgagcgagcgagcga 93 ||||||||||||||||||||| Sbjct: 52 ccccagcgagcgagcgagcga 72
>dbj|AP006333.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7_A, complete sequence Length = 118828 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 caacaaggtcaaggtcaccac 265 ||||||||||||||||||||| Sbjct: 74416 caacaaggtcaaggtcaccac 74436
>dbj|AP003554.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-21A7, complete sequence Length = 150474 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 caacaaggtcaaggtcaccac 265 ||||||||||||||||||||| Sbjct: 74416 caacaaggtcaaggtcaccac 74436
>dbj|AB042411.1| Homo sapiens strg gene for striatum-specific G potein-coupled receptor, complete cds Length = 9448 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 127 gggagctcgaggaggacgacggggg 151 |||||||||||||||| |||||||| Sbjct: 5916 gggagctcgaggaggaggacggggg 5892
>gb|AC163703.4| Mus musculus BAC clone RP23-359B23 from chromosome 8, complete sequence Length = 219082 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 158286 gacctcgacttcctgctgcc 158267
>ref|XM_483507.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1950 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aggccgccgtcgagcgccgc 326 |||||||||||||||||||| Sbjct: 1339 aggccgccgtcgagcgccgc 1358
>ref|XM_507598.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702E04.39 mRNA Length = 1988 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aggccgccgtcgagcgccgc 326 |||||||||||||||||||| Sbjct: 1397 aggccgccgtcgagcgccgc 1416
>ref|XM_507306.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702E04.39 mRNA Length = 1988 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aggccgccgtcgagcgccgc 326 |||||||||||||||||||| Sbjct: 1397 aggccgccgtcgagcgccgc 1416
>ref|NM_196634.1| Oryza sativa (japonica cultivar-group) putative protein kinase (OSJNBa0019M20.6), mRNA Length = 996 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 ggagctcgaggaggacgacg 147 |||||||||||||||||||| Sbjct: 691 ggagctcgaggaggacgacg 672
>ref|NM_182557.1| Homo sapiens B-cell CLL/lymphoma 9-like (BCL9L), mRNA Length = 7539 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gagcgagcgagcgacagcca 99 |||||||||||||||||||| Sbjct: 246 gagcgagcgagcgacagcca 227
>gb|AC111129.12| Mus musculus chromosome 5, clone RP23-339H11, complete sequence Length = 196458 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gcgccgctcctggggcaagt 339 |||||||||||||||||||| Sbjct: 189342 gcgccgctcctggggcaagt 189361
>gb|AY024044.1| Oryza sativa microsatellite MRG6369 containing (CTCG)X6, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cccagcgagcgagcgagcga 93 |||||||||||||||||||| Sbjct: 129 cccagcgagcgagcgagcga 110
>ref|NM_133255.1| Mus musculus hook homolog 2 (Drosophila) (Hook2), mRNA Length = 2521 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 2244 gacctcgacttcctgctgcc 2263
>ref|XM_865554.1| PREDICTED: Bos taurus similar to Opioid binding protein/cell adhesion molecule precursor (OBCAM) (Opioid-binding cell adhesion molecule) (OPCML) (LOC614173), partial mRNA Length = 615 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cccagcgagcgagcgagcga 93 |||||||||||||||||||| Sbjct: 13 cccagcgagcgagcgagcga 32
>gb|BC055881.1| Mus musculus hook homolog 2 (Drosophila), mRNA (cDNA clone MGC:68106 IMAGE:3590336), complete cds Length = 2477 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 2211 gacctcgacttcctgctgcc 2230
>gb|BC019486.1| Mus musculus hook homolog 2 (Drosophila), mRNA (cDNA clone MGC:28586 IMAGE:4211990), complete cds Length = 2521 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 2244 gacctcgacttcctgctgcc 2263
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 tcggcgacgccgccagcggc 359 |||||||||||||||||||| Sbjct: 2584650 tcggcgacgccgccagcggc 2584631
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cccagcgagcgagcgagcga 93 |||||||||||||||||||| Sbjct: 14537030 cccagcgagcgagcgagcga 14537011
>gb|BC002226.1| Mus musculus hook homolog 2 (Drosophila), mRNA (cDNA clone IMAGE:3491260), partial cds Length = 1826 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 1477 gacctcgacttcctgctgcc 1496
>ref|XM_542644.2| PREDICTED: Canis familiaris similar to UDP-glucose:glycoprotein glucosyltransferase 2 (LOC485525), mRNA Length = 5103 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tccggtggggggagctcgag 137 |||||||||||||||||||| Sbjct: 263 tccggtggggggagctcgag 244
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cgtctccaccgaggagatcc 405 |||||||||||||||||||| Sbjct: 932534 cgtctccaccgaggagatcc 932515
>gb|AC130538.4| Mus musculus BAC clone RP23-450E2 from chromosome 7, complete sequence Length = 169082 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cccagcgagcgagcgagcga 93 |||||||||||||||||||| Sbjct: 101111 cccagcgagcgagcgagcga 101092
>gb|AC124355.3| Mus musculus BAC clone RP24-483G17 from chromosome 18, complete sequence Length = 161461 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 tggggggagctcgaggagga 142 |||||||||||||||||||| Sbjct: 136109 tggggggagctcgaggagga 136090
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 gcgacgccgccagcggcgac 362 |||||||||||||||||||| Sbjct: 5172924 gcgacgccgccagcggcgac 5172943
>ref|XM_503789.1| Yarrowia lipolytica CLIB122, YALI0E10637g predicted mRNA Length = 2217 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ggagctcgaggaggacgacg 147 |||||||||||||||||||| Sbjct: 894 ggagctcgaggaggacgacg 913
>emb|AL360227.17| Human DNA sequence from clone RP11-428F8 on chromosome 6 Contains the SLC16A10 gene for solute carrier family 16 (monocarboxylic acid transporters) member 10, the 3' part of a novel gene and a CpG island, complete sequence Length = 161938 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tccccattccacaaccaagc 21 |||||||||||||||||||| Sbjct: 3172 tccccattccacaaccaagc 3191
>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete sequence Length = 147130 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cccagcgagcgagcgagcga 93 |||||||||||||||||||| Sbjct: 120681 cccagcgagcgagcgagcga 120700
>emb|X58188.1|DMTROPONI D.melanogaster tn1 gene Length = 12871 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 agcgagcgagcgagcgacag 96 |||||||||||||||||||| Sbjct: 10091 agcgagcgagcgagcgacag 10072
>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11 Length = 346357 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 cgacgacggcaacaaggtca 255 |||||||||||||||||||| Sbjct: 247980 cgacgacggcaacaaggtca 247961
>gb|AC149383.2| Phakopsora pachyrhizi clone JGIAFNA-5A9, complete sequence Length = 39440 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 agcgagcgagcgagcgacag 96 |||||||||||||||||||| Sbjct: 19368 agcgagcgagcgagcgacag 19387
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ggagctcgaggaggacgacg 147 |||||||||||||||||||| Sbjct: 68705 ggagctcgaggaggacgacg 68724
>dbj|AK136069.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420452M08 product:hook homolog 2 (Drosophila), full insert sequence Length = 2522 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 2190 gacctcgacttcctgctgcc 2209
>dbj|AK145768.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0040G18 product:hook homolog 2 (Drosophila), full insert sequence Length = 2569 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 2236 gacctcgacttcctgctgcc 2255
>dbj|AK166954.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0025F04 product:hook homolog 2 (Drosophila), full insert sequence Length = 2578 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 2245 gacctcgacttcctgctgcc 2264
>dbj|AK169073.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920078M12 product:hook homolog 2 (Drosophila), full insert sequence Length = 2569 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 2236 gacctcgacttcctgctgcc 2255
>gb|BC026609.1| Mus musculus hook homolog 2 (Drosophila), mRNA (cDNA clone IMAGE:4976545), partial cds Length = 1698 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 1428 gacctcgacttcctgctgcc 1447
>dbj|AK042048.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630054I03 product:HOOK2 PROTEIN homolog [Homo sapiens], full insert sequence Length = 2477 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 2256 gacctcgacttcctgctgcc 2275
>dbj|AK030599.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330437A17 product:HOOK2 PROTEIN homolog [Homo sapiens], full insert sequence Length = 2626 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 2284 gacctcgacttcctgctgcc 2303
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccagcgagcgagcgagcgac 94 |||||||||||||||||||| Sbjct: 24436444 ccagcgagcgagcgagcgac 24436425
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aggccgccgtcgagcgccgc 326 |||||||||||||||||||| Sbjct: 26597603 aggccgccgtcgagcgccgc 26597622
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cccagcgagcgagcgagcga 93 |||||||||||||||||||| Sbjct: 14532001 cccagcgagcgagcgagcga 14531982
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gtcgtcatcgggcccgacga 199 |||||||||||||||||||| Sbjct: 2067146 gtcgtcatcgggcccgacga 2067165
>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete sequence Length = 135594 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cccagcgagcgagcgagcga 93 |||||||||||||||||||| Sbjct: 4355 cccagcgagcgagcgagcga 4374
>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702C09 Length = 138203 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aggccgccgtcgagcgccgc 326 |||||||||||||||||||| Sbjct: 9130 aggccgccgtcgagcgccgc 9149
>dbj|AP003413.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1151A10 Length = 124344 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cccagcgagcgagcgagcga 93 |||||||||||||||||||| Sbjct: 107240 cccagcgagcgagcgagcga 107259
>gb|AE004992.1| Halobacterium sp. NRC-1 section 23 of 170 of the complete genome Length = 16488 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 caccaccaccacccgcgtcc 279 |||||||||||||||||||| Sbjct: 9708 caccaccaccacccgcgtcc 9727
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 ggagctcgaggaggacgacg 147 |||||||||||||||||||| Sbjct: 74968 ggagctcgaggaggacgacg 74949
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aggccgccgtcgagcgccgc 326 |||||||||||||||||||| Sbjct: 146470 aggccgccgtcgagcgccgc 146489
>ref|XM_311006.2| Anopheles gambiae str. PEST ENSANGP00000008130 (ENSANGG00000006134), partial mRNA Length = 3261 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gccgcgggtcgtcatcgggc 192 |||||||||||||||||||| Sbjct: 594 gccgcgggtcgtcatcgggc 613
>dbj|AK107897.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-F04, full insert sequence Length = 789 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cccagcgagcgagcgagcga 93 |||||||||||||||||||| Sbjct: 43 cccagcgagcgagcgagcga 62
>dbj|AK106161.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-A12, full insert sequence Length = 1988 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aggccgccgtcgagcgccgc 326 |||||||||||||||||||| Sbjct: 1397 aggccgccgtcgagcgccgc 1416
>dbj|AK106265.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-F12, full insert sequence Length = 1573 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 ggagctcgaggaggacgacg 147 |||||||||||||||||||| Sbjct: 1077 ggagctcgaggaggacgacg 1058
>dbj|AK098885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I07, full insert sequence Length = 1950 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aggccgccgtcgagcgccgc 326 |||||||||||||||||||| Sbjct: 1339 aggccgccgtcgagcgccgc 1358
>dbj|AK072305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019A13, full insert sequence Length = 1527 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 ggagctcgaggaggacgacg 147 |||||||||||||||||||| Sbjct: 1040 ggagctcgaggaggacgacg 1021
>dbj|AK068039.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131B20, full insert sequence Length = 1757 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccagcgagcgagcgagcgac 94 |||||||||||||||||||| Sbjct: 22 ccagcgagcgagcgagcgac 3
>dbj|AK067593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108J24, full insert sequence Length = 1136 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 cccagcgagcgagcgagcga 93 |||||||||||||||||||| Sbjct: 44 cccagcgagcgagcgagcga 25
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 227 ccgcttcgacgacgacggcaacaaggtcaagg 258 |||| ||||| ||||| ||||||||||||||| Sbjct: 776261 ccgcgtcgactacgaccgcaacaaggtcaagg 776230
>gb|AF466200.2| Sorghum bicolor putative protein kinase gene, partial cds; putative Cf-2, fertilization-independent endosperm proteins, hypothetical protein, putative non-LTR retroelement reverse transcriptase, OCL5 protein, tryptophan synthase beta-subunit, hypothetical proteins, putative AP endonuclease, putative RNA polymerase II complex component SRB7, putative beta-1,3-glucanase, hypothetical protein, TNP2-like protein, hypothetical protein, putative phosphate/phosphoenolpyruvate translocator, putative protein, hypothetical proteins, putative galactosyltransferase family, hypothetical protein, putative cytochrome P450 family, putative lipid transfer protein, putative photoreceptor-interacting protein, and hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 202197 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cggcgacgccgccagcggcg 360 |||||||||||||||||||| Sbjct: 146040 cggcgacgccgccagcggcg 146059
>dbj|AK062301.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H05, full insert sequence Length = 1898 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccagcgagcgagcgagcgac 94 |||||||||||||||||||| Sbjct: 62 ccagcgagcgagcgagcgac 43
>dbj|AK061731.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C04, full insert sequence Length = 1988 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 aggccgccgtcgagcgccgc 326 |||||||||||||||||||| Sbjct: 1397 aggccgccgtcgagcgccgc 1416
>gb|AC110565.7| Mus musculus chromosome 5, clone RP23-297N19, complete sequence Length = 194214 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gcgccgctcctggggcaagt 339 |||||||||||||||||||| Sbjct: 47543 gcgccgctcctggggcaagt 47562
>gb|AF019145.2|AF019145 Zea mays cysteine protease Mir1 (mir1) mRNA, complete cds Length = 1463 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 caccaccaccacccgcgtcc 279 |||||||||||||||||||| Sbjct: 142 caccaccaccacccgcgtcc 161
>dbj|AB094091.1| Homo sapiens DLNB11 mRNA, complete cds Length = 7539 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gagcgagcgagcgacagcca 99 |||||||||||||||||||| Sbjct: 246 gagcgagcgagcgacagcca 227
>dbj|AP004609.1| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-158I9, complete sequence Length = 195409 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gagcgagcgagcgacagcca 99 |||||||||||||||||||| Sbjct: 127667 gagcgagcgagcgacagcca 127686
>gb|BC099235.1| Rattus norvegicus hook homolog 2 (Drosophila), mRNA (cDNA clone IMAGE:7444932), partial cds Length = 2067 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 1784 gacctcgacttcctgctgcc 1803
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 343 gcgacgccgccagcggcgacgacgcctccgcg 374 |||||||||||||||||| | ||| ||||||| Sbjct: 3763827 gcgacgccgccagcggcgtcaacgtctccgcg 3763796
>gb|AC174464.1| Oryza sativa (japonica cultivar-group) chromosome 10 BAC clone OSJNBb0094D21, complete sequence Length = 127821 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 347 cgccgccagcggcgacgacgcctccgcg 374 ||||||||||| |||||||||| ||||| Sbjct: 78608 cgccgccagcgacgacgacgccgccgcg 78635
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccagcgagcgagcgagcgac 94 |||||||||||||||||||| Sbjct: 29766 ccagcgagcgagcgagcgac 29747
>dbj|AP003392.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-110I1, complete sequence Length = 178341 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 gagcgagcgagcgacagcca 99 |||||||||||||||||||| Sbjct: 1730 gagcgagcgagcgacagcca 1749
>gb|BC080744.1| Mus musculus hook homolog 2 (Drosophila), mRNA (cDNA clone MGC:91008 IMAGE:30471369), complete cds Length = 2606 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 2258 gacctcgacttcctgctgcc 2277
>gb|BC029967.1| Mus musculus hook homolog 2 (Drosophila), mRNA (cDNA clone IMAGE:4242056) Length = 2557 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 gacctcgacttcctgctgcc 172 |||||||||||||||||||| Sbjct: 2209 gacctcgacttcctgctgcc 2228
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 ggagctcgaggaggacgacg 147 |||||||||||||||||||| Sbjct: 1320565 ggagctcgaggaggacgacg 1320584
>gb|M27087.1|HUMMCSF1A Homo sapiens macrophage colony-stimulating factor (M-CSF1) cDNA to mRNA, complete cds Length = 2475 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 cccagcgagcgagcgagcga 93 |||||||||||||||||||| Sbjct: 63 cccagcgagcgagcgagcga 82 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,889,903 Number of Sequences: 3902068 Number of extensions: 2889903 Number of successful extensions: 91312 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88969 Number of HSP's gapped (non-prelim): 2332 length of query: 406 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 384 effective length of database: 17,147,199,772 effective search space: 6584524712448 effective search space used: 6584524712448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
