ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast27d10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KATAM_ARATH (Q7XJ98) Xyloglucan galactosyltransferase KATAMARI 1... 69 5e-12
2ABI1_RAT (Q9QZM5) Abl interactor 1 (Abelson interactor 1) (Abi-1... 29 5.9
3ABI1_HUMAN (Q8IZP0) Abl interactor 1 (Abelson interactor 1) (Abi... 29 5.9
4ABI1_MOUSE (Q8CBW3) Abl interactor 1 (Abelson interactor 1) (Abi... 29 7.7
5CDSN_MOUSE (Q7TPC1) Corneodesmosin precursor 29 7.7

>KATAM_ARATH (Q7XJ98) Xyloglucan galactosyltransferase KATAMARI 1 (EC 2.4.1.-)|
           (MURUS3 protein)
          Length = 619

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 5/117 (4%)
 Frame = +1

Query: 133 DSSDPCAGRRIHIRDLPPRFNTHLLRHCDAAFPLADXXXXXXXXXXCESLANHGLGPRTH 312
           + SDPC G+ I++ +LP +FN  +LR C                  C+   N GLGP   
Sbjct: 146 NKSDPCGGKYIYVHNLPSKFNEDMLRDCKKL---------SLWTNMCKFTTNAGLGPPLE 196

Query: 313 A-----RSRSWYRTDARLLEPFFHRRLLERRCLVADPGLADAVFVPYYAALDSIPYV 468
                     WY T+   ++  F  R+ + +CL  D  LA A+FVP+YA  D   Y+
Sbjct: 197 NVEGVFSDEGWYATNQFAVDVIFSNRMKQYKCLTNDSSLAAAIFVPFYAGFDIARYL 253



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>ABI1_RAT (Q9QZM5) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Eps8 SH3|
           domain-binding protein) (Eps8-binding protein) (e3B1)
          Length = 475

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
 Frame = +2

Query: 26  SLSLARPTPP----TPRCPILXXXXXXXXXXAQSPETPPP 133
           S+S+A P PP    TP+ P+           A SP  PPP
Sbjct: 326 SISIAPPPPPMPQLTPQIPLTGFVARVQENIADSPTPPPP 365



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>ABI1_HUMAN (Q8IZP0) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Spectrin|
           SH3 domain-binding protein 1) (Eps8 SH3 domain-binding
           protein) (Eps8-binding protein) (e3B1) (Nap1-binding
           protein) (Nap1BP) (Abl-binding protein 4) (AblBP4)
          Length = 507

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
 Frame = +2

Query: 26  SLSLARPTPP----TPRCPILXXXXXXXXXXAQSPETPPP 133
           S+S+A P PP    TP+ P+           A SP  PPP
Sbjct: 358 SISIAPPPPPMPQLTPQIPLTGFVARVQENIADSPTPPPP 397



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>ABI1_MOUSE (Q8CBW3) Abl interactor 1 (Abelson interactor 1) (Abi-1) (Spectrin|
           SH3 domain-binding protein 1) (Eps8 SH3 domain-binding
           protein) (Eps8-binding protein) (e3B1) (Ablphilin-1)
          Length = 480

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
 Frame = +2

Query: 26  SLSLARPTPP----TPRCPILXXXXXXXXXXAQSPETPPP 133
           S+S+A P PP    TP+ P+           A SP  PPP
Sbjct: 331 SISVAPPPPPMPQLTPQIPLTGFVARVQENIADSPTPPPP 370



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>CDSN_MOUSE (Q7TPC1) Corneodesmosin precursor|
          Length = 561

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -3

Query: 311 WVRGPSPWLASDSQVGAEVADEDGSASGKAASQWRRRCVLKRGGKS 174
           WV   S W++S SQ G+  +  D   SG A     +   + + G S
Sbjct: 188 WVSSSSQWVSSSSQSGSSGSSRDRPGSGSALPTGDKTSGMSQSGGS 233


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,659,972
Number of Sequences: 219361
Number of extensions: 643511
Number of successful extensions: 2391
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2385
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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