>PTK7_HUMAN (Q13308) Tyrosine-protein kinase-like 7 precursor (Colon carcinoma|
           kinase 4) (CCK-4)
          Length = 1070

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
 Frame = -3

Query: 167 QPSERTHARTHAESHPRVLCSALLWPTDGT--SSGAGGHWAEERDGALKNRPVG 12
           QP  +   R H + HPR       W  DGT  S G   H    ++  L  RP G
Sbjct: 141 QPQTQVKLRCHIDGHPR---PTYQWFRDGTPLSDGQSNHTVSSKERNLTLRPAG 191

>DYH1A_CHLRE (Q9SMH3) Dynein-1-alpha heavy chain, flagellar inner arm I1 complex|
           (1-alpha DHC) (Dynein-1, subspecies f)
          Length = 4625

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -3

Query: 170 GQPSERTHARTHAE-SHPRVLCSALLWPTDGTSSGAGGHWAEERDGALKNRP 18
           GQP +   A   A  ++P    +A   P DG + GA G   EE DGA  + P
Sbjct: 108 GQPEDAPAAAAEANGANPEDEAAA---PADGAADGAAGEGGEEGDGAEGDEP 156

>FBX42_PONPY (Q5RDA9) F-box only protein 42|
          Length = 717

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 10  APTGRFLSAPSLSSAQCP---PAPLLVPSVGQSRAEQSTRGCDSA-CV 141
           AP+GR   +PSL+S   P     P LVP   + R++   R  D A CV
Sbjct: 357 APSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAPCV 404

>FBX42_MOUSE (Q6PDJ6) F-box only protein 42|
          Length = 717

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 10  APTGRFLSAPSLSSAQCP---PAPLLVPSVGQSRAEQSTRGCDSA-CV 141
           AP+GR   +PSL+S   P     P LVP   + R++   R  D A CV
Sbjct: 357 APSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAPCV 404

>FBX42_HUMAN (Q6P3S6) F-box only protein 42|
          Length = 717

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 10  APTGRFLSAPSLSSAQCP---PAPLLVPSVGQSRAEQSTRGCDSA-CV 141
           AP+GR   +PSL+S   P     P LVP   + R++   R  D A CV
Sbjct: 357 APSGRAPLSPSLNSRPSPISATPPALVPETREYRSQSPVRSMDEAPCV 404

>KIFC2_HUMAN (Q96AC6) Kinesin-like protein KIFC2|
          Length = 838

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 10/52 (19%)
 Frame = +1

Query: 10  APTGRFL-SAPSLSSAQCPPAPLL---------VPSVGQSRAEQSTRGCDSA 135
           AP GR L SAP+L S   PPAPL          VP+  ++R  +  R C S+
Sbjct: 769 APPGRLLPSAPTLRSPG-PPAPLRRPLAVLHAPVPTTARARLSRPQRACPSS 819

>NUDT6_HUMAN (P53370) Nucleoside diphosphate-linked moiety X motif 6 (Nudix|
           motif 6) (Protein GFG) (GFG-1) (Antisense basic
           fibroblast growth factor)
          Length = 316

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 104 ALLWPTDGTSSGAGGHWAEERDGALKNRPVGA 9
           A+L  T G    AG  WA    G ++N PVGA
Sbjct: 12  AMLARTYGPGPSAGYRWASGAQGYVRNPPVGA 43

>HYSA_PROAC (Q59634) Hyaluronate lyase precursor (EC 4.2.2.1) (Hyaluronidase)|
           (HYase)
          Length = 813

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -2

Query: 144 THARRVAPTRALLCSALADGRDEQRSRRTLGG-GERWR 34
           T A R+  TRA++C ++A G DE+R R  + G  + WR
Sbjct: 219 TGANRMDLTRAVMCRSIATG-DEKRLRHAVDGLPDAWR 255

>UBR1_CAEEL (P91133) Ubiquitin-protein ligase E3 component N-recognin (EC|
           6.-.-.-) (Ubiquitin-protein ligase E3-alpha)
          Length = 1927

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 47  PPPSVLLLRCSSRPSARAEQSKARVGATLRACVRGCA 157
           P  S   +  S    + AEQS+ARV A +   VR CA
Sbjct: 877 PTYSPFFMHYSKSDQSAAEQSQARVRAKMEKSVRACA 913


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.131    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,291,697
Number of Sequences: 219361
Number of extensions: 721244
Number of successful extensions: 2755
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2755
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)