ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast27c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470034.1| Oryza sativa (japonica cultivar-group), mRNA 210 2e-51
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 210 2e-51
3gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genom... 210 2e-51
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 210 2e-51
5dbj|AK068398.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 1e-33
6ref|XM_476370.1| Oryza sativa (japonica cultivar-group), mRNA 64 3e-07
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
8dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
9dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
10dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
11ref|XM_471828.1| Oryza sativa (japonica cultivar-group), predic... 60 4e-06
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 60 4e-06
13emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4,... 60 4e-06
14ref|XM_480000.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-05
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
16dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
17dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-05
18dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-05
19dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic D... 56 7e-05
20gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
21gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
22dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
23gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
24gb|AY108433.1| Zea mays PCO067235 mRNA sequence 50 0.004
25ref|XM_543576.2| PREDICTED: Canis familiaris similar to Nebulin ... 44 0.25
26ref|XM_846510.1| PREDICTED: Canis familiaris similar to Nebulin ... 44 0.25
27gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 44 0.25
28ref|XM_504977.1| Yarrowia lipolytica CLIB122, YALI0F04081g predi... 42 0.98
29dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 0.98
30emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 42 0.98
31ref|XM_512387.1| PREDICTED: Pan troglodytes dedicator of cytokin... 40 3.9
32ref|XM_483092.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.9
33gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 3.9
34ref|NM_020812.1| Homo sapiens dedicator of cytokinesis 6 (DOCK6)... 40 3.9
35emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 3.9
36emb|AJ400903.1|HDI400903 Holotrichia diomphalia mRNA for prophen... 40 3.9
37gb|AC023694.4| Drosophila melanogaster X BAC RP98-18B11 (Roswell... 40 3.9
38gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 3.9
39gb|AC011472.7|AC011472 Homo sapiens chromosome 19 clone CTC-510F... 40 3.9
40gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 3.9
41dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
42dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
43dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
44dbj|AK108305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.9
45dbj|AK069113.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.9
46gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 ... 40 3.9
47dbj|AB037816.2| Homo sapiens mRNA for KIAA1395 protein, partial cds 40 3.9
48dbj|AP006381.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 3.9 
>ref|XM_470034.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 591

 Score =  210 bits (106), Expect = 2e-51
 Identities = 166/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 4   cacaacgtgctggaggtgaacaaggctgactacaacagctgcaccaactcgacgccgatc 63
           ||||||||| |||||||||| ||||| |||||| ||||||||||||||||| ||||||||
Sbjct: 157 cacaacgtggtggaggtgaagaaggcggactacgacagctgcaccaactcgtcgccgatc 216

                                                                       
Query: 64  gcgacccacacctccggcgacgacaaggtgaccatcaagagccccggccaccgcttcttc 123
           || || ||||||||||||||||||||| |  ||||||||  | |||||||||||||||||
Sbjct: 217 gccacgcacacctccggcgacgacaagatcgccatcaaggccgccggccaccgcttcttc 276

                                                                       
Query: 124 atctgcggcgtgccgggccactgcgccgccgggcagaagctcaacgtccgcgtgctcaag 183
           ||||||||||| || ||||||||||||||||| |||||| ||||| ||||||| ||||||
Sbjct: 277 atctgcggcgtccccggccactgcgccgccggccagaaggtcaacatccgcgtcctcaag 336

                 
Query: 184 acacag 189
            |||||
Sbjct: 337 ccacag 342
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  210 bits (106), Expect = 2e-51
 Identities = 166/186 (89%)
 Strand = Plus / Plus

                                                                            
Query: 4        cacaacgtgctggaggtgaacaaggctgactacaacagctgcaccaactcgacgccgatc 63
                ||||||||| |||||||||| ||||| |||||| ||||||||||||||||| ||||||||
Sbjct: 33451414 cacaacgtggtggaggtgaagaaggcggactacgacagctgcaccaactcgtcgccgatc 33451473

                                                                            
Query: 64       gcgacccacacctccggcgacgacaaggtgaccatcaagagccccggccaccgcttcttc 123
                || || ||||||||||||||||||||| |  ||||||||  | |||||||||||||||||
Sbjct: 33451474 gccacgcacacctccggcgacgacaagatcgccatcaaggccgccggccaccgcttcttc 33451533

                                                                            
Query: 124      atctgcggcgtgccgggccactgcgccgccgggcagaagctcaacgtccgcgtgctcaag 183
                ||||||||||| || ||||||||||||||||| |||||| ||||| ||||||| ||||||
Sbjct: 33451534 atctgcggcgtccccggccactgcgccgccggccagaaggtcaacatccgcgtcctcaag 33451593

                      
Query: 184      acacag 189
                 |||||
Sbjct: 33451594 ccacag 33451599
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>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete
             sequence
          Length = 154555

 Score =  210 bits (106), Expect = 2e-51
 Identities = 166/186 (89%)
 Strand = Plus / Minus

                                                                         
Query: 4     cacaacgtgctggaggtgaacaaggctgactacaacagctgcaccaactcgacgccgatc 63
             ||||||||| |||||||||| ||||| |||||| ||||||||||||||||| ||||||||
Sbjct: 46697 cacaacgtggtggaggtgaagaaggcggactacgacagctgcaccaactcgtcgccgatc 46638

                                                                         
Query: 64    gcgacccacacctccggcgacgacaaggtgaccatcaagagccccggccaccgcttcttc 123
             || || ||||||||||||||||||||| |  ||||||||  | |||||||||||||||||
Sbjct: 46637 gccacgcacacctccggcgacgacaagatcgccatcaaggccgccggccaccgcttcttc 46578

                                                                         
Query: 124   atctgcggcgtgccgggccactgcgccgccgggcagaagctcaacgtccgcgtgctcaag 183
             ||||||||||| || ||||||||||||||||| |||||| ||||| ||||||| ||||||
Sbjct: 46577 atctgcggcgtccccggccactgcgccgccggccagaaggtcaacatccgcgtcctcaag 46518

                   
Query: 184   acacag 189
              |||||
Sbjct: 46517 ccacag 46512
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  210 bits (106), Expect = 2e-51
 Identities = 166/186 (89%)
 Strand = Plus / Plus

                                                                            
Query: 4        cacaacgtgctggaggtgaacaaggctgactacaacagctgcaccaactcgacgccgatc 63
                ||||||||| |||||||||| ||||| |||||| ||||||||||||||||| ||||||||
Sbjct: 33541924 cacaacgtggtggaggtgaagaaggcggactacgacagctgcaccaactcgtcgccgatc 33541983

                                                                            
Query: 64       gcgacccacacctccggcgacgacaaggtgaccatcaagagccccggccaccgcttcttc 123
                || || ||||||||||||||||||||| |  ||||||||  | |||||||||||||||||
Sbjct: 33541984 gccacgcacacctccggcgacgacaagatcgccatcaaggccgccggccaccgcttcttc 33542043

                                                                            
Query: 124      atctgcggcgtgccgggccactgcgccgccgggcagaagctcaacgtccgcgtgctcaag 183
                ||||||||||| || ||||||||||||||||| |||||| ||||| ||||||| ||||||
Sbjct: 33542044 atctgcggcgtccccggccactgcgccgccggccagaaggtcaacatccgcgtcctcaag 33542103

                      
Query: 184      acacag 189
                 |||||
Sbjct: 33542104 ccacag 33542109
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>dbj|AK068398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L03, full
           insert sequence
          Length = 1100

 Score =  151 bits (76), Expect = 1e-33
 Identities = 115/128 (89%)
 Strand = Plus / Plus

                                                                       
Query: 4   cacaacgtgctggaggtgaacaaggctgactacaacagctgcaccaactcgacgccgatc 63
           ||||||||| |||||||||| ||||| |||||| ||||||||||||||||| ||||||||
Sbjct: 309 cacaacgtggtggaggtgaagaaggcggactacgacagctgcaccaactcgtcgccgatc 368

                                                                       
Query: 64  gcgacccacacctccggcgacgacaaggtgaccatcaagagccccggccaccgcttcttc 123
           || || ||||||||||||||||||||| |  ||||||||  | |||||||||||||||||
Sbjct: 369 gccacgcacacctccggcgacgacaagatcgccatcaaggccgccggccaccgcttcttc 428

                   
Query: 124 atctgcgg 131
           ||||||||
Sbjct: 429 atctgcgg 436



 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 4   cacaacgtgctggaggtgaacaaggctgactacaacagctgcaccaactcgacgccgatc 63
           ||||||||| |||||||||| ||||| |||||| ||||||||||||||||| ||||||||
Sbjct: 559 cacaacgtggtggaggtgaagaaggcggactacgacagctgcaccaactcgtcgccgatc 618

             
Query: 64  gc 65
           ||
Sbjct: 619 gc 620
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>ref|XM_476370.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 588

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                               
Query: 120 cttcatctgcggcgtgccgggccactgcgccgccgg 155
           |||||||||||||||||| |||||||||||||||||
Sbjct: 309 cttcatctgcggcgtgcccggccactgcgccgccgg 344
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                                  
Query: 120    cttcatctgcggcgtgccgggccactgcgccgccgg 155
              |||||||||||||||||| |||||||||||||||||
Sbjct: 290514 cttcatctgcggcgtgcccggccactgcgccgccgg 290549



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 109      ggccaccgcttcttcatctgcggcgtgccgggccactgcg 148
                ||||||| || |||| |||||||| | |||||||||||||
Sbjct: 22943737 ggccaccactacttcctctgcggcttcccgggccactgcg 22943698
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>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0446F04
          Length = 175390

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                                  
Query: 120    cttcatctgcggcgtgccgggccactgcgccgccgg 155
              |||||||||||||||||| |||||||||||||||||
Sbjct: 125378 cttcatctgcggcgtgcccggccactgcgccgccgg 125413
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>dbj|AP006186.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1317D11
          Length = 135043

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                                 
Query: 120   cttcatctgcggcgtgccgggccactgcgccgccgg 155
             |||||||||||||||||| |||||||||||||||||
Sbjct: 14752 cttcatctgcggcgtgcccggccactgcgccgccgg 14787
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>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0617C02
          Length = 135605

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 35/36 (97%)
 Strand = Plus / Plus

                                                 
Query: 120   cttcatctgcggcgtgccgggccactgcgccgccgg 155
             |||||||||||||||||| |||||||||||||||||
Sbjct: 42513 cttcatctgcggcgtgcccggccactgcgccgccgg 42548
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>ref|XM_471828.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 6462

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                          
Query: 120  cttcatctgcggcgtgccgggccactgcgccgccgggcagaagctc 165
            ||||||||||||||| || ||||||||||||||||||  |||||||
Sbjct: 6375 cttcatctgcggcgtccccggccactgcgccgccgggatgaagctc 6420
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 120      cttcatctgcggcgtgccgggccactgcgccgccgggcagaagctc 165
                ||||||||||||||| || ||||||||||||||||||  |||||||
Sbjct: 14790169 cttcatctgcggcgtccccggccactgcgccgccgggatgaagctc 14790124
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>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06,
             complete sequence
          Length = 107014

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                           
Query: 120   cttcatctgcggcgtgccgggccactgcgccgccgggcagaagctc 165
             ||||||||||||||| || ||||||||||||||||||  |||||||
Sbjct: 44107 cttcatctgcggcgtccccggccactgcgccgccgggatgaagctc 44062
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>ref|XM_480000.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 573

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 115 cgcttcttcatctgcggcgtgccgggccactgcgccgccgg 155
           |||| ||||||||||||||||||||| ||||||| ||||||
Sbjct: 292 cgctacttcatctgcggcgtgccggggcactgcgacgccgg 332
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                        
Query: 115     cgcttcttcatctgcggcgtgccgggccactgcgccgccgg 155
               |||| ||||||||||||||||||||| ||||||| ||||||
Sbjct: 2142167 cgctacttcatctgcggcgtgccggggcactgcgacgccgg 2142207



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 84       cgacaaggtgaccatcaaga 103
                ||||||||||||||||||||
Sbjct: 24245987 cgacaaggtgaccatcaaga 24246006
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>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_D01
          Length = 97862

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 115   cgcttcttcatctgcggcgtgccgggccactgcgccgccgg 155
             |||| ||||||||||||||||||||| ||||||| ||||||
Sbjct: 20429 cgctacttcatctgcggcgtgccggggcactgcgacgccgg 20469
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                   
Query: 120     cttcatctgcggcgtgccgggccactgcgccgccgg 155
               ||||||||||||| ||||||||||||||| ||||||
Sbjct: 8847891 cttcatctgcggcatgccgggccactgcgacgccgg 8847856
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>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1001_B06
          Length = 134810

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                  
Query: 120    cttcatctgcggcgtgccgggccactgcgccgccgg 155
              ||||||||||||| ||||||||||||||| ||||||
Sbjct: 118212 cttcatctgcggcatgccgggccactgcgacgccgg 118177
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>dbj|AP003575.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528B02
          Length = 144495

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 120   cttcatctgcggcgtgccgggccactgcgccgccgg 155
             ||||||||||||| ||||||||||||||| ||||||
Sbjct: 13520 cttcatctgcggcatgccgggccactgcgacgccgg 13485
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>gb|AC135561.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0086N07 map S790A, complete sequence
          Length = 178523

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 123   catctgcggcgtgccgggccactgcgccgccggg 156
             |||||||||||| || ||||||||||||||||||
Sbjct: 38745 catctgcggcgtccccggccactgcgccgccggg 38712
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>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0095J10 map near S6115, complete sequence
          Length = 123717

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 120   cttcatctgcggcgtgccgggccactgcgccgccgggcagaagctc 165
             ||||||||||||||| || |||||||||||| |||||  |||||||
Sbjct: 53573 cttcatctgcggcgtcccaggccactgcgccaccgggatgaagctc 53618
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 123      catctgcggcgtgccgggccactgcgccgccggg 156
                |||||||||||| || ||||||||||||||||||
Sbjct: 13145335 catctgcggcgtccccggccactgcgccgccggg 13145368



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 120      cttcatctgcggcgtgccgggccactgcgccgccgggcagaagctc 165
                ||||||||||||||| || |||||||||||| |||||  |||||||
Sbjct: 12981676 cttcatctgcggcgtcccaggccactgcgccaccgggatgaagctc 12981721
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                                  
Query: 123      catctgcggcgtgccgggccactgcgccgccggg 156
                |||||||||||| || ||||||||||||||||||
Sbjct: 13225514 catctgcggcgtccccggccactgcgccgccggg 13225547



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 120      cttcatctgcggcgtgccgggccactgcgccgccgggcagaagctc 165
                ||||||||||||||| || |||||||||||| |||||  |||||||
Sbjct: 13061855 cttcatctgcggcgtcccaggccactgcgccaccgggatgaagctc 13061900
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>gb|AY108433.1| Zea mays PCO067235 mRNA sequence
          Length = 840

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 2   tccacaacgtgctggaggtgaacaaggctgactacaa 38
           ||||||||||||||| ||||| |||||| ||||||||
Sbjct: 277 tccacaacgtgctggcggtgagcaaggcggactacaa 313



 Score = 44.1 bits (22), Expect = 0.25
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 109 ggccaccgcttcttcatctgcggcgtgccgggccactgcgccgccgggcagaag 162
           ||||||| || |||| ||||||||   |||||||||||||| ||||| ||||||
Sbjct: 384 ggccaccactacttcctctgcggctacccgggccactgcgctgccggccagaag 437
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>ref|XM_543576.2| PREDICTED: Canis familiaris similar to Nebulin (LOC486450), mRNA
          Length = 1836

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 23  acaaggctgactacaacagctg 44
           ||||||||||||||||||||||
Sbjct: 515 acaaggctgactacaacagctg 536
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>ref|XM_846510.1| PREDICTED: Canis familiaris similar to Nebulin (LOC609277), mRNA
          Length = 4821

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 23   acaaggctgactacaacagctg 44
            ||||||||||||||||||||||
Sbjct: 3104 acaaggctgactacaacagctg 3125
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 53     cgacgccgatcgcgacccacac 74
              ||||||||||||||||||||||
Sbjct: 126633 cgacgccgatcgcgacccacac 126654
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>ref|XM_504977.1| Yarrowia lipolytica CLIB122, YALI0F04081g predicted mRNA
          Length = 1308

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 87   caaggtgaccatcaagagccccggc 111
            ||||||||||||||||||| |||||
Sbjct: 1182 caaggtgaccatcaagagcaccggc 1206
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 75      ctccggcgacgacaaggtgaccatc 99
               ||||||| |||||||||||||||||
Sbjct: 4553160 ctccggcaacgacaaggtgaccatc 4553136
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 87     caaggtgaccatcaagagccccggc 111
              ||||||||||||||||||| |||||
Sbjct: 609714 caaggtgaccatcaagagcaccggc 609690
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>ref|XM_512387.1| PREDICTED: Pan troglodytes dedicator of cytokinesis 6 (LOC455723),
           mRNA
          Length = 9247

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  ggtgaacaaggctgactaca 37
           ||||||||||||||||||||
Sbjct: 688 ggtgaacaaggctgactaca 669
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>ref|XM_483092.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  cgacaaggtgaccatcaaga 103
           ||||||||||||||||||||
Sbjct: 453 cgacaaggtgaccatcaaga 472
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 131     gcgtgccgggccactgcgccgccg 154
               ||||||||||||||||| ||||||
Sbjct: 1513088 gcgtgccgggccactgcaccgccg 1513111
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>ref|NM_020812.1| Homo sapiens dedicator of cytokinesis 6 (DOCK6), mRNA
          Length = 6356

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   ggtgaacaaggctgactaca 37
            ||||||||||||||||||||
Sbjct: 2461 ggtgaacaaggctgactaca 2442
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 131     gcgtgccgggccactgcgccgccg 154
               ||||||||||||||||| ||||||
Sbjct: 2847834 gcgtgccgggccactgcaccgccg 2847857
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>emb|AJ400903.1|HDI400903 Holotrichia diomphalia mRNA for prophenoloxidase activating factor
            (PPAF gene)
          Length = 1437

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 10   gtgctggaggtgaacaaggc 29
            ||||||||||||||||||||
Sbjct: 1055 gtgctggaggtgaacaaggc 1074
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>gb|AC023694.4| Drosophila melanogaster X BAC RP98-18B11 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 170301

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    ggctgactacaacagctgca 46
             ||||||||||||||||||||
Sbjct: 34643 ggctgactacaacagctgca 34662
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 273     cagtggcagcagcgcctcga 292
               ||||||||||||||||||||
Sbjct: 3266887 cagtggcagcagcgcctcga 3266868
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>gb|AC011472.7|AC011472 Homo sapiens chromosome 19 clone CTC-510F12, complete sequence
          Length = 122321

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    ggtgaacaaggctgactaca 37
             ||||||||||||||||||||
Sbjct: 33298 ggtgaacaaggctgactaca 33317
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 131    gcgtgccgggccactgcgccgccg 154
              ||||||||||||||||| ||||||
Sbjct: 390436 gcgtgccgggccactgcaccgccg 390413
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>dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0502B12
          Length = 197160

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 120    cttcatctgcggcgtgccgggccactgc 147
              ||||||| |||||| |||||||||||||
Sbjct: 111128 cttcatcagcggcgcgccgggccactgc 111155
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>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0605H02
          Length = 175547

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     cgacaaggtgaccatcaaga 103
              ||||||||||||||||||||
Sbjct: 112326 cgacaaggtgaccatcaaga 112345
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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1121_A05
          Length = 172668

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 109   ggccaccgcttcttcatctgcggcgtgccgggccactgcg 148
             ||||||| || |||| |||||||| | |||||||||||||
Sbjct: 18951 ggccaccactacttcctctgcggcttcccgggccactgcg 18912
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>dbj|AK108305.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-F05, full
           insert sequence
          Length = 788

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  cgacaaggtgaccatcaaga 103
           ||||||||||||||||||||
Sbjct: 185 cgacaaggtgaccatcaaga 204
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>dbj|AK069113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007I01, full
           insert sequence
          Length = 924

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 120 cttcatctgcggcgtgccgggccactgc 147
           ||||||| |||||| |||||||||||||
Sbjct: 446 cttcatcagcggcgcgccgggccactgc 473
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>gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 of 74 of the complete
              sequence
          Length = 307201

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     ggctgactacaacagctgca 46
              ||||||||||||||||||||
Sbjct: 224470 ggctgactacaacagctgca 224489
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>dbj|AB037816.2| Homo sapiens mRNA for KIAA1395 protein, partial cds
          Length = 6356

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 18   ggtgaacaaggctgactaca 37
            ||||||||||||||||||||
Sbjct: 2461 ggtgaacaaggctgactaca 2442
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>dbj|AP006381.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT09G09, TM0234,
             complete sequence
          Length = 105887

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 120   cttcatctgcggcgtgccgggccactgc 147
             ||||||||||||||| || |||||||||
Sbjct: 66880 cttcatctgcggcgttcccggccactgc 66907


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,677,471
Number of Sequences: 3902068
Number of extensions: 1677471
Number of successful extensions: 31102
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30517
Number of HSP's gapped (non-prelim): 585
length of query: 296
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 274
effective length of database: 17,147,199,772
effective search space: 4698332737528
effective search space used: 4698332737528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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