| Clone Name | bast27c02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189879.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1077 Score = 315 bits (159), Expect = 6e-83 Identities = 283/323 (87%), Gaps = 1/323 (0%) Strand = Plus / Plus Query: 52 gctcgccgccggccagctcgcgccgccactccaccatgaagttgaacatcgcgaacccca 111 |||||||||| || |||||||||||| | | ||||||||||| |||||||||||||| | Sbjct: 57 gctcgccgcccgcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccga 116 Query: 112 ccacggggtgccagaagaaggtcgagatcgatgacgaccagaagctgcggaacctttatg 171 |||| ||||||||||||||| |||||||||||||||||||||||||||| ||| || Sbjct: 117 ccaccgggtgccagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttg 176 Query: 172 acaagagaatctcccaggaggtagttggtgatcttcatgggtgaggaattcaagggttat 231 ||||||| ||||| |||||||| ||| ||| || |||| |||||||||||||| ||| Sbjct: 177 acaagaggatctctcaggaggtcagtggcgatgctc-tgggcgaggaattcaagggctat 235 Query: 232 atcttcaagatcatgggtggctgtgataagcagggtttcccgatgaagcaaggagtgcta 291 |||||||||||||||| || ||||| |||||||||||||| |||||||| |||||||| Sbjct: 236 gtcttcaagatcatggggggttgtgacaagcagggtttccctatgaagcagggagtgctc 295 Query: 292 acttctgggcgtgtccgccttctgcttcacaggggcacgccttgcttccgtggttatggc 351 ||| |||| |||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 296 actgctggacgtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggc 355 Query: 352 aggcgtaatggtgagcgcaggag 374 |||||| |||||||||||||||| Sbjct: 356 aggcgtgatggtgagcgcaggag 378
>dbj|AK069465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022D14, full insert sequence Length = 1078 Score = 315 bits (159), Expect = 6e-83 Identities = 283/323 (87%), Gaps = 1/323 (0%) Strand = Plus / Plus Query: 52 gctcgccgccggccagctcgcgccgccactccaccatgaagttgaacatcgcgaacccca 111 |||||||||| || |||||||||||| | | ||||||||||| |||||||||||||| | Sbjct: 58 gctcgccgcccgcgagctcgcgccgcttcgcaaccatgaagttcaacatcgcgaacccga 117 Query: 112 ccacggggtgccagaagaaggtcgagatcgatgacgaccagaagctgcggaacctttatg 171 |||| ||||||||||||||| |||||||||||||||||||||||||||| ||| || Sbjct: 118 ccaccgggtgccagaagaagctcgagatcgatgacgaccagaagctgcgtgcattttttg 177 Query: 172 acaagagaatctcccaggaggtagttggtgatcttcatgggtgaggaattcaagggttat 231 ||||||| ||||| |||||||| ||| ||| || |||| |||||||||||||| ||| Sbjct: 178 acaagaggatctctcaggaggtcagtggcgatgctc-tgggcgaggaattcaagggctat 236 Query: 232 atcttcaagatcatgggtggctgtgataagcagggtttcccgatgaagcaaggagtgcta 291 |||||||||||||||| || ||||| |||||||||||||| |||||||| |||||||| Sbjct: 237 gtcttcaagatcatggggggttgtgacaagcagggtttccctatgaagcagggagtgctc 296 Query: 292 acttctgggcgtgtccgccttctgcttcacaggggcacgccttgcttccgtggttatggc 351 ||| |||| |||||||||||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 297 actgctggacgtgtccgccttcttcttcacaggggcacaccttgcttccgtgggtatggc 356 Query: 352 aggcgtaatggtgagcgcaggag 374 |||||| |||||||||||||||| Sbjct: 357 aggcgtgatggtgagcgcaggag 379
>gb|AF295599.1| Zea mays ribosomal protein s6 RPS6-2 (rps6-2) mRNA, complete cds Length = 1023 Score = 264 bits (133), Expect = 2e-67 Identities = 266/309 (86%), Gaps = 1/309 (0%) Strand = Plus / Plus Query: 66 agctcgcgccgccactccaccatgaagttgaacatcgcgaaccccaccacggggtgccag 125 |||||||||||| || ||||||||||||| |||||||||||||| | || ||||||||| Sbjct: 48 agctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgtctaccgggtgccag 107 Query: 126 aagaaggtcgagatcgatgacgaccagaagctgcggaacctttatgacaagagaatctcc 185 |||||| | || ||||||||||||||||| || || | |||||||| || |||||| Sbjct: 108 aagaagctggaaatcgatgacgaccagaaactacgtgccttttatgaccgaaggatctcc 167 Query: 186 caggaggtagttggtgatcttcatgggtgaggaattcaagggttatatcttcaagatcat 245 |||||||| ||||||| || |||||||||| || ||||||||| ||||||||||||| Sbjct: 168 caggaggtcagtggtgatgctc-tgggtgaggagtttaagggttatgtcttcaagatcat 226 Query: 246 gggtggctgtgataagcagggtttcccgatgaagcaaggagtgctaacttctgggcgtgt 305 |||||| ||||| || || || ||||| |||||||||||||| || |||||||| ||||| Sbjct: 227 gggtggatgtgacaaacaaggcttcccaatgaagcaaggagttctgacttctggtcgtgt 286 Query: 306 ccgccttctgcttcacaggggcacgccttgcttccgtggttatggcaggcgtaatggtga 365 |||||||||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 287 ccgccttctgctccacagaggcactccctgcttccgcggttatggcaggcgtaatggtga 346 Query: 366 gcgcaggag 374 ||||||||| Sbjct: 347 gcgcaggag 355
>gb|AY103674.1| Zea mays PCO104001 mRNA sequence Length = 1198 Score = 264 bits (133), Expect = 2e-67 Identities = 266/309 (86%), Gaps = 1/309 (0%) Strand = Plus / Plus Query: 66 agctcgcgccgccactccaccatgaagttgaacatcgcgaaccccaccacggggtgccag 125 |||||||||||| || ||||||||||||| |||||||||||||| | || ||||||||| Sbjct: 176 agctcgcgccgcaacgccaccatgaagttcaacatcgcgaacccgtctaccgggtgccag 235 Query: 126 aagaaggtcgagatcgatgacgaccagaagctgcggaacctttatgacaagagaatctcc 185 |||||| | || ||||||||||||||||| || || | |||||||| || |||||| Sbjct: 236 aagaagctggaaatcgatgacgaccagaaactacgtgccttttatgaccgaaggatctcc 295 Query: 186 caggaggtagttggtgatcttcatgggtgaggaattcaagggttatatcttcaagatcat 245 |||||||| ||||||| || |||||||||| || ||||||||| ||||||||||||| Sbjct: 296 caggaggtcagtggtgatgctc-tgggtgaggagtttaagggttatgtcttcaagatcat 354 Query: 246 gggtggctgtgataagcagggtttcccgatgaagcaaggagtgctaacttctgggcgtgt 305 |||||| ||||| || || || ||||| |||||||||||||| || |||||||| ||||| Sbjct: 355 gggtggatgtgacaaacaaggcttcccaatgaagcaaggagttctgacttctggtcgtgt 414 Query: 306 ccgccttctgcttcacaggggcacgccttgcttccgtggttatggcaggcgtaatggtga 365 |||||||||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 415 ccgccttctgctccacagaggcactccctgcttccgcggttatggcaggcgtaatggtga 474 Query: 366 gcgcaggag 374 ||||||||| Sbjct: 475 gcgcaggag 483
>gb|U92045.1|ZMU92045 Zea mays ribosomal protein S6 RPS6-1 (rps6-1) mRNA, complete cds Length = 1039 Score = 256 bits (129), Expect = 5e-65 Identities = 262/305 (85%), Gaps = 1/305 (0%) Strand = Plus / Plus Query: 70 cgcgccgccactccaccatgaagttgaacatcgcgaaccccaccacggggtgccagaaga 129 |||||||| || ||||||||||||| |||||||||||||| |||| |||||||| |||| Sbjct: 53 cgcgccgcaacgccaccatgaagttcaacatcgcgaacccttccaccgggtgccaaaaga 112 Query: 130 aggtcgagatcgatgacgaccagaagctgcggaacctttatgacaagagaatctcccagg 189 || | || ||||||||||||||||||||||| | |||||||| || || ||||||| Sbjct: 113 agctggaaatcgatgacgaccagaagctgcgtgccttttatgaccgaaggatatcccagg 172 Query: 190 aggtagttggtgatcttcatgggtgaggaattcaagggttatatcttcaagatcatgggt 249 |||| ||||||| || |||||||||| |||||||||||| ||||||||||||||||| Sbjct: 173 aggtcagtggtgatgctc-tgggtgaggagttcaagggttatgtcttcaagatcatgggt 231 Query: 250 ggctgtgataagcagggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgc 309 || ||||| ||||| || ||||| |||||||||||||| | |||||||| ||||| || Sbjct: 232 ggatgtgacaagcaaggcttcccaatgaagcaaggagttttgacttctggtcgtgttcgt 291 Query: 310 cttctgcttcacaggggcacgccttgcttccgtggttatggcaggcgtaatggtgagcgc 369 |||||||| || ||||| || || |||||||||||||||||||||||||||||||||||| Sbjct: 292 cttctgctccatagggggactccctgcttccgtggttatggcaggcgtaatggtgagcgc 351 Query: 370 aggag 374 ||||| Sbjct: 352 aggag 356
>ref|XM_470801.1| Oryza sativa (japonica cultivar-group), mRNA Length = 983 Score = 252 bits (127), Expect = 7e-64 Identities = 248/287 (86%), Gaps = 1/287 (0%) Strand = Plus / Plus Query: 85 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatg 144 |||||||||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 40 ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 99 Query: 145 acgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatc 204 ||||||||||||| ||| ||||||||||||| ||||||||||| || ||||||| Sbjct: 100 acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 159 Query: 205 ttcatgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcag 264 || ||| || ||||||||||| ||| | |||||||||||||| |||||||| ||||| Sbjct: 160 ctcttggc-gaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaa 218 Query: 265 ggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagg 324 |||||||| |||||||| || ||||| |||||||| |||||||||||||| || |||||| Sbjct: 219 ggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagg 278 Query: 325 ggcacgccttgcttccgtggttatggcaggcgtaatggtgagcgcag 371 || || || ||||||||||| |||||||||||| ||||||||||||| Sbjct: 279 ggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcag 325
>dbj|AK121621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045B01, full insert sequence Length = 1018 Score = 252 bits (127), Expect = 7e-64 Identities = 248/287 (86%), Gaps = 1/287 (0%) Strand = Plus / Plus Query: 85 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatg 144 |||||||||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 38 ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 97 Query: 145 acgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatc 204 ||||||||||||| ||| ||||||||||||| ||||||||||| || ||||||| Sbjct: 98 acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 157 Query: 205 ttcatgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcag 264 || ||| || ||||||||||| ||| | |||||||||||||| |||||||| ||||| Sbjct: 158 ctcttggc-gaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaa 216 Query: 265 ggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagg 324 |||||||| |||||||| || ||||| |||||||| |||||||||||||| || |||||| Sbjct: 217 ggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagg 276 Query: 325 ggcacgccttgcttccgtggttatggcaggcgtaatggtgagcgcag 371 || || || ||||||||||| |||||||||||| ||||||||||||| Sbjct: 277 ggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcag 323
>dbj|AK061827.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C07, full insert sequence Length = 990 Score = 252 bits (127), Expect = 7e-64 Identities = 248/287 (86%), Gaps = 1/287 (0%) Strand = Plus / Plus Query: 85 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatg 144 |||||||||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||| Sbjct: 37 ccatgaagttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatg 96 Query: 145 acgaccagaagctgcggaacctttatgacaagagaatctcccaggaggtagttggtgatc 204 ||||||||||||| ||| ||||||||||||| ||||||||||| || ||||||| Sbjct: 97 acgaccagaagctccgggcattttatgacaagaggatctcccaggaagtcagtggtgatg 156 Query: 205 ttcatgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcag 264 || ||| || ||||||||||| ||| | |||||||||||||| |||||||| ||||| Sbjct: 157 ctcttggc-gaagaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaa 215 Query: 265 ggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagg 324 |||||||| |||||||| || ||||| |||||||| |||||||||||||| || |||||| Sbjct: 216 ggtttccccatgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagg 275 Query: 325 ggcacgccttgcttccgtggttatggcaggcgtaatggtgagcgcag 371 || || || ||||||||||| |||||||||||| ||||||||||||| Sbjct: 276 ggtaccccctgcttccgtggatatggcaggcgtgatggtgagcgcag 322
>gb|BT014365.1| Lycopersicon esculentum clone 133651F, mRNA sequence Length = 1065 Score = 170 bits (86), Expect = 2e-39 Identities = 236/281 (83%), Gaps = 5/281 (1%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||||| |||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 72 atgaagttcaacattgcgaacccgactactgggtgccagaagaagctcgagatcgatgat 131 Query: 147 gaccagaagctgcggaacctt-tatgacaagagaatctcccaggaggtagttggtgat-c 204 |||||||| || || | | || | ||||||||| |||||||||||||| || ||| | Sbjct: 132 gaccagaaactccg-agctttctttgacaagaggatctcccaggaggttagcggagatgc 190 Query: 205 ttcatgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcag 264 || |||| ||||| |||||||| || | |||||||| ||||| || ||||| ||||| Sbjct: 191 tt--tgggagaggagttcaagggatacgttttcaagattatgggaggatgtgacaagcaa 248 Query: 265 ggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagg 324 |||||||| |||||||| |||||| ||||| | || ||||| || |||||||||||||| Sbjct: 249 ggtttcccaatgaagcagggagtgttaactccaggccgtgttcgtcttctgcttcacaga 308 Query: 325 ggcacgccttgcttccgtggttatggcaggcgtaatggtga 365 ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 309 ggcactccttgcttccgtggttatggtaggcgtaatggtga 349
>gb|DQ191669.1| Solanum tuberosum ribosomal protein S6-like protein mRNA, complete cds Length = 1032 Score = 168 bits (85), Expect = 8e-39 Identities = 238/284 (83%), Gaps = 5/284 (1%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||||| |||||||| || || ||||||||||||||| ||||||||||||| Sbjct: 52 atgaagttcaacattgcgaacccgactactgggtgccagaagaagctcgagatcgatgat 111 Query: 147 gaccagaagctgcggaacctt-tatgacaagagaatctcccaggaggtagttggtgat-c 204 |||||||| || || | | || ||||||||||| |||||||||||||| || ||| | Sbjct: 112 gaccagaaactccg-agctttctatgacaagaggatctcccaggaggttagcggagatgc 170 Query: 205 ttcatgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcag 264 || |||| ||||| |||||||| || | |||||||| ||||| || ||||| ||||| Sbjct: 171 tt--tgggagaggagttcaagggatacgttttcaagattatgggaggatgtgacaagcaa 228 Query: 265 ggtttcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagg 324 |||||||| |||||||| |||||| ||||| | || ||||| || ||||||||| |||| Sbjct: 229 ggtttcccaatgaagcagggagtgttaactccaggccgtgttcgtcttctgctttacaga 288 Query: 325 ggcacgccttgcttccgtggttatggcaggcgtaatggtgagcg 368 ||||| ||||||||||||||| |||| ||||||||||||||||| Sbjct: 289 ggcactccttgcttccgtggtcatggtaggcgtaatggtgagcg 332
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 135 bits (68), Expect = 1e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 215 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccga 274 ||||||||||||| ||| |||||||||||||||| || ||||| |||||||||||||| | Sbjct: 25670681 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 25670740 Query: 275 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 326 ||||||| |||||||| ||| |||| |||||||||||||| ||||||||||| Sbjct: 25670741 tgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagggg 25670792 Score = 103 bits (52), Expect = 4e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 91 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 150 |||| |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 25669518 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 25669577 Query: 151 agaagctg 158 |||||||| Sbjct: 25669578 agaagctg 25669585 Score = 75.8 bits (38), Expect = 9e-11 Identities = 47/50 (94%) Strand = Plus / Plus Query: 325 ggcacgccttgcttccgtggttatggcaggcgtaatggtgagcgcaggag 374 ||||| |||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 25670871 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggag 25670920
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 135 bits (68), Expect = 1e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 215 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccga 274 ||||||||||||| ||| |||||||||||||||| || ||||| |||||||||||||| | Sbjct: 124654 aggaattcaagggctatgtcttcaagatcatggggggttgtgacaagcagggtttcccta 124713 Query: 275 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 326 ||||||| |||||||| ||| |||| |||||||||||||| ||||||||||| Sbjct: 124714 tgaagcagggagtgctcactgctggacgtgtccgccttcttcttcacagggg 124765 Score = 103 bits (52), Expect = 4e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 91 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 150 |||| |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 123491 agttcaacatcgcgaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 123550 Query: 151 agaagctg 158 |||||||| Sbjct: 123551 agaagctg 123558 Score = 75.8 bits (38), Expect = 9e-11 Identities = 47/50 (94%) Strand = Plus / Plus Query: 325 ggcacgccttgcttccgtggttatggcaggcgtaatggtgagcgcaggag 374 ||||| |||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 124844 ggcacaccttgcttccgtgggtatggcaggcgtgatggtgagcgcaggag 124893
>gb|BT014411.1| Lycopersicon esculentum clone 133718F, mRNA sequence Length = 1067 Score = 125 bits (63), Expect = 1e-25 Identities = 138/163 (84%) Strand = Plus / Plus Query: 209 tgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtt 268 |||||||||| ||||||||||| | |||||||| ||||| || ||||| ||||| || | Sbjct: 185 tgggtgaggagttcaagggttacgttttcaagataatgggaggatgtgacaagcaagggt 244 Query: 269 tcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggca 328 |||| ||||| || |||||| ||||| |||| ||||| |||||| |||| ||||| || | Sbjct: 245 tccctatgaaacagggagtgttaactcctggccgtgttcgccttttgctccacagaggta 304 Query: 329 cgccttgcttccgtggttatggcaggcgtaatggtgagcgcag 371 | |||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 305 ctccttgcttccgtggttatggtaggcgaaatggagagcgcag 347 Score = 56.0 bits (28), Expect = 8e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||||| ||||| |||||||| ||||||||||| ||| | || |||||||| Sbjct: 64 atgaagttcaacattgcgaatcccaccactgggtgccagaaaaagcttgaaatcgatgat 123 Query: 147 gaccagaa 154 || ||||| Sbjct: 124 gatcagaa 131
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 119 bits (60), Expect = 7e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 215 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccga 274 ||||||||||||| ||| | |||||||||||||| |||||||| ||||| |||||||| | Sbjct: 15461567 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 15461508 Query: 275 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 326 ||||||| || ||||| |||||||| |||||||||||||| || |||||||| Sbjct: 15461507 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 15461456 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 91 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 150 |||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 15462534 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 15462475 Query: 151 agaagctg 158 |||||||| Sbjct: 15462474 agaagctg 15462467 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 334 tgcttccgtggttatggcaggcgtaatggtgagcgcag 371 ||||||||||| |||||||||||| ||||||||||||| Sbjct: 15461353 tgcttccgtggatatggcaggcgtgatggtgagcgcag 15461316 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 tttatgacaagagaatctcccagga 190 ||||||||||||| ||||||||||| Sbjct: 15461701 tttatgacaagaggatctcccagga 15461677
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 119 bits (60), Expect = 7e-24 Identities = 99/112 (88%) Strand = Plus / Plus Query: 215 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccga 274 ||||||||||||| ||| | |||||||||||||| |||||||| ||||| |||||||| | Sbjct: 39959 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 40018 Query: 275 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 326 ||||||| || ||||| |||||||| |||||||||||||| || |||||||| Sbjct: 40019 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 40070 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 91 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 150 |||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 38992 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 39051 Query: 151 agaagctg 158 |||||||| Sbjct: 39052 agaagctg 39059 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 334 tgcttccgtggttatggcaggcgtaatggtgagcgcag 371 ||||||||||| |||||||||||| ||||||||||||| Sbjct: 40173 tgcttccgtggatatggcaggcgtgatggtgagcgcag 40210 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 tttatgacaagagaatctcccagga 190 ||||||||||||| ||||||||||| Sbjct: 39825 tttatgacaagaggatctcccagga 39849
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 119 bits (60), Expect = 7e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 215 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccga 274 ||||||||||||| ||| | |||||||||||||| |||||||| ||||| |||||||| | Sbjct: 15456101 aggaattcaagggctatgtattcaagatcatgggaggctgtgacaagcaaggtttcccca 15456042 Query: 275 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacagggg 326 ||||||| || ||||| |||||||| |||||||||||||| || |||||||| Sbjct: 15456041 tgaagcagggtgtgcttacttctggacgtgtccgccttctcctccacagggg 15455990 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 91 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 150 |||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||||||||| Sbjct: 15457068 agttcaacatcgccaacccgaccaccgggtgccagaagaagctcgagatcgatgacgacc 15457009 Query: 151 agaagctg 158 |||||||| Sbjct: 15457008 agaagctg 15457001 Score = 60.0 bits (30), Expect = 5e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 334 tgcttccgtggttatggcaggcgtaatggtgagcgcag 371 ||||||||||| |||||||||||| ||||||||||||| Sbjct: 15455887 tgcttccgtggatatggcaggcgtgatggtgagcgcag 15455850 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 tttatgacaagagaatctcccagga 190 ||||||||||||| ||||||||||| Sbjct: 15456235 tttatgacaagaggatctcccagga 15456211
>emb|AJ277533.1|AOF277533 Asparagus officinalis mRNA for S6 ribosomal protein (rps6 gene) Length = 959 Score = 109 bits (55), Expect = 7e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 214 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 273 ||||| |||||||| ||| | ||||| |||||||| || ||||| ||||||||||| || Sbjct: 152 gaggagttcaagggatatgttttcaaaatcatgggaggttgtgacaagcagggttttccc 211 Query: 274 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacgcct 333 |||||||| |||||||| ||| |||| || |||||||| |||| ||||| || || ||| Sbjct: 212 atgaagcagggagtgctgactcctggtcgcgtccgcctattgctgcacagaggaacacct 271 Query: 334 tgcttccgtggttatggcaggcg 356 ||||||||||||||||| ||||| Sbjct: 272 tgcttccgtggttatggaaggcg 294 Score = 69.9 bits (35), Expect = 6e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| || ||||| || |||||||| ||||||||||| ||| ||||||| || ||| Sbjct: 26 atgaagttcaatatcgccaatcccaccactgggtgccagaaaaagctcgagattgacgac 85 Query: 147 gaccagaagct 157 ||||||||||| Sbjct: 86 gaccagaagct 96
>gb|DQ241846.1| Solanum tuberosum clone 186G09 unknown mRNA Length = 1056 Score = 109 bits (55), Expect = 7e-21 Identities = 136/163 (83%) Strand = Plus / Plus Query: 209 tgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtt 268 |||||||||| ||||| ||||| | |||||||| ||||| || ||||| ||||| || | Sbjct: 169 tgggtgaggagttcaaaggttacgttttcaagataatgggaggatgtgacaagcaagggt 228 Query: 269 tcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggca 328 |||| |||||||| |||||| ||||| |||| ||||| |||||| |||| |||| || | Sbjct: 229 tcccaatgaagcagggagtgttaactcctggccgtgttcgccttttgctctacagaggta 288 Query: 329 cgccttgcttccgtggttatggcaggcgtaatggtgagcgcag 371 | ||||||||||||||| |||| ||||| ||||| |||||||| Sbjct: 289 ctccttgcttccgtggtcatggtaggcgaaatggagagcgcag 331 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaa 127 |||||||| ||||| ||||| || ||||| ||||||||||| Sbjct: 48 atgaagttcaacattgcgaatccgaccactgggtgccagaa 88
>gb|AY453394.1| Glycine max ribosomal protein S6 (RPS6) mRNA, complete cds Length = 1020 Score = 99.6 bits (50), Expect = 6e-18 Identities = 137/166 (82%) Strand = Plus / Plus Query: 211 ggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttc 270 ||||||||||| ||||| ||| ||||||| || | || || ||||| || || || || Sbjct: 186 ggtgaggaatttaagggctatgtcttcaaaattaccggaggttgtgacaaacaaggattt 245 Query: 271 ccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacg 330 || |||||||| |||||||| ||| |||| ||||| | ||| ||||||||||||| || Sbjct: 246 ccaatgaagcagggagtgctgactcctggtcgtgttagacttttgcttcacaggggaact 305 Query: 331 ccttgcttccgtggttatggcaggcgtaatggtgagcgcaggagaa 376 |||||||||||||| ||||| ||||||||||| ||||| ||||||| Sbjct: 306 ccttgcttccgtggatatggaaggcgtaatggagagcgtaggagaa 351 Score = 75.8 bits (38), Expect = 9e-11 Identities = 56/62 (90%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||||||||||| |||||||| || |||||||||||| |||||||||| ||| Sbjct: 63 atgaagttcaacatcgcgaatcccaccactggatgccagaagaagctcgagatcgacgac 122 Query: 147 ga 148 || Sbjct: 123 ga 124
>dbj|D78497.1| Brassica rapa mRNA for putative ribosomal protein, partial cds Length = 426 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 209 tgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtt 268 |||| ||||| |||||||| || | ||||||||||||||||| ||||| ||||| |||| Sbjct: 71 tgggcgaggagttcaaggggtacgttttcaagatcatgggtgggtgtgacaagcaaggtt 130 Query: 269 tcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggca 328 |||| |||||||| ||||| ||||| |||| ||||| |||||| |||||||| | || | Sbjct: 131 tccctatgaagcagggagttttaactcctggccgtgttcgccttttgcttcaccgaggaa 190 Query: 329 cgccttgctt 338 | |||||||| Sbjct: 191 ctccttgctt 200
>ref|NM_121074.2| Arabidopsis thaliana EMB3010; structural constituent of ribosome AT5G10360 (EMB3010) mRNA, complete cds Length = 1095 Score = 87.7 bits (44), Expect = 2e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 214 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 273 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271 Query: 274 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 321 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 86 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 145 Query: 147 ga 148 || Sbjct: 146 ga 147
>gb|AY093783.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 750 Score = 87.7 bits (44), Expect = 2e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 214 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 273 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 127 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 186 Query: 274 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 321 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 187 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 234 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 1 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 60 Query: 147 ga 148 || Sbjct: 61 ga 62
>gb|AY057634.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 87.7 bits (44), Expect = 2e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 214 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 273 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271 Query: 274 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 321 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 86 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 145 Query: 147 ga 148 || Sbjct: 146 ga 147
>gb|AY045594.1| Arabidopsis thaliana AT5g10360/F12B17_290 mRNA, complete cds Length = 993 Score = 87.7 bits (44), Expect = 2e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 214 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 273 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 212 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 271 Query: 274 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 321 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 272 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 319 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 86 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 145 Query: 147 ga 148 || Sbjct: 146 ga 147
>emb|BX832002.1|CNS0A26R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 969 Score = 87.7 bits (44), Expect = 2e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 214 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 273 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 195 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 254 Query: 274 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 321 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 255 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 302 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 69 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 128 Query: 147 ga 148 || Sbjct: 129 ga 130
>emb|BX830696.1|CNS0A0OB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS15ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 947 Score = 87.7 bits (44), Expect = 2e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 214 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 273 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 193 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 252 Query: 274 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 321 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 253 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 300 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 67 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 126 Query: 147 ga 148 || Sbjct: 127 ga 128
>emb|Y14052.1|ATY14052 Arabidopsis thaliana mRNA for ribosomal protein S6 Length = 957 Score = 87.7 bits (44), Expect = 2e-14 Identities = 92/108 (85%) Strand = Plus / Plus Query: 214 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 273 |||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| Sbjct: 127 gaggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttccca 186 Query: 274 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 321 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 187 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 234 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 1 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 60 Query: 147 ga 148 || Sbjct: 61 ga 62
>dbj|AK109085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H09, full insert sequence Length = 1049 Score = 87.7 bits (44), Expect = 2e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 85 ccatgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatg 144 |||||||| | ||||| || |||||||||||||| ||||||||||| ||||||| |||| Sbjct: 61 ccatgaagctcaacattgcctaccccaccacggggcgccagaagaagctcgagattgatg 120 Query: 145 acgaccagaagctgcg 160 |||||||||||||||| Sbjct: 121 acgaccagaagctgcg 136 Score = 48.1 bits (24), Expect = 0.021 Identities = 66/80 (82%) Strand = Plus / Plus Query: 211 ggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttc 270 ||||| || |||||||| || |||||||||||||||| || || |||||||||||| Sbjct: 186 ggtgacgagttcaagggctacgtcttcaagatcatgggaggacaggacaagcagggtttc 245 Query: 271 ccgatgaagcaaggagtgct 290 || |||||||| || ||||| Sbjct: 246 cccatgaagcagggtgtgct 265
>emb|AL353995.1|ATF12B17 Arabidopsis thaliana DNA chromosome 5, BAC clone F12B17 (ESSA project) Length = 113053 Score = 85.7 bits (43), Expect = 9e-14 Identities = 91/107 (85%) Strand = Plus / Plus Query: 215 aggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccga 274 ||||||||||||| || | |||||||||||||| || ||||| ||||| |||||||| | Sbjct: 105321 aggaattcaagggatacgtattcaagatcatgggaggatgtgacaagcaaggtttcccaa 105380 Query: 275 tgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 321 |||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 105381 tgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 105427
>emb|BX829995.1|CNS0A1FC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 981 Score = 79.8 bits (40), Expect = 6e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 214 gaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccg 273 |||||||||||||| || | |||||||||||||| || ||| | ||||| |||||||| Sbjct: 193 gaggaattcaagggatacgtattcaagatcatgggaggatgttacaagcaaggtttccca 252 Query: 274 atgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcac 321 ||||| |||||||| || ||| | ||||||||||| ||| |||||||| Sbjct: 253 atgaaacaaggagttctcactccagggcgtgtccgtcttttgcttcac 300 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| |||| || || ||||| ||||| || ||||| |||||||||||||| Sbjct: 67 atgaagttcaacgtcgccaatccgaccaccgggtgtcaaaagaaactcgagatcgatgac 126 Query: 147 ga 148 || Sbjct: 127 ga 128
>gb|AY293401.1| Brassica napus ribosomal protein S6 (RPS6) mRNA, complete cds Length = 980 Score = 77.8 bits (39), Expect = 2e-11 Identities = 108/131 (82%) Strand = Plus / Plus Query: 209 tgggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtt 268 |||| ||||| |||||||| || || |||||||||||||| || ||||| ||||| || | Sbjct: 182 tgggcgaggagttcaagggatacattttcaagatcatgggagggtgtgacaagcaaggct 241 Query: 269 tcccgatgaagcaaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggca 328 |||| |||||||| ||||| ||||| | || ||||| |||||| |||||||| | || | Sbjct: 242 tcccaatgaagcagggagttttaactccaggccgtgttcgccttttgcttcaccgaggaa 301 Query: 329 cgccttgcttc 339 | ||||||||| Sbjct: 302 ctccttgcttc 312 Score = 63.9 bits (32), Expect = 3e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| |||| ||||| ||||| || |||||||||||| |||||||||| || Sbjct: 61 atgaagtttaacgtcgcaaacccaaccactggttgccagaagaagctcgagatcgacgat 120 Query: 147 gaccagaa 154 |||||||| Sbjct: 121 gaccagaa 128
>gb|AC155341.1| Brassica rapa subsp. pekinensis chromosome 6 clone KBrH004D11, complete sequence Length = 106476 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 91 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 150 |||| ||| ||||||| || ||||| || |||||||||||| |||||||||||||||||| Sbjct: 90228 agttcaacgtcgcgaatccgaccactggatgccagaagaagctcgagatcgatgacgacc 90169 Query: 151 agaagctg 158 | |||||| Sbjct: 90168 aaaagctg 90161 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 235 ttcaagatcatgggtggctgtgataagcagggtttcccgatgaagcaaggagtgctaact 294 |||||||||||||| || || || ||||| || ||||||||||| || ||||| || || Sbjct: 89824 ttcaagatcatgggaggatgcgacaagcaaggcttcccgatgaaacagggagttctcacc 89765 Query: 295 tctgggcgtgtccgccttctgcttcacaggggcacgccttgcttc 339 |||| |||||||| || |||||||| | ||||| ||||||||| Sbjct: 89764 cctggtcgtgtccgtctcttgcttcaccgaggcactccttgcttc 89720
>emb|X68050.1|NTRPS6 N.tabacum mRNA for ribosomal protein S6 Length = 804 Score = 71.9 bits (36), Expect = 1e-09 Identities = 126/156 (80%) Strand = Plus / Minus Query: 221 tcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttcccgatgaagc 280 |||| |||||| | |||||||| ||||| || ||||| |||||||| || || ||||||| Sbjct: 804 tcaaaggttatgtgttcaagattatgggaggatgtgacaagcaggggtttccaatgaagc 745 Query: 281 aaggagtgctaacttctgggcgtgtccgccttctgcttcacaggggcacgccttgcttcc 340 | ||||| ||||| | || ||||| |||||| |||| || | ||||| ||||| |||| Sbjct: 744 agggagttttaactccaggccgtgttcgccttttgctgtaccgcggcactccttgtttcc 685 Query: 341 gtggttatggcaggcgtaatggtgagcgcaggagaa 376 | || ||||| ||| | |||||||||||||| |||| Sbjct: 684 gggggtatggtaggagaaatggtgagcgcagaagaa 649
>dbj|AP006076.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19M07, TM0114, complete sequence Length = 94533 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 331 ccttgcttccgtggttatggcaggcgtaatggtgagcgcaggagaa 376 |||||||||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 18674 ccttgcttccgtggatatggaaggcgtaatggagagcgcaggagaa 18719 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 91 agttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgacgacc 150 |||| ||||||||||| || ||||| ||||||||||||||| |||| |||||||| |||| Sbjct: 17770 agttcaacatcgcgaatccaaccactgggtgccagaagaagctcgaaatcgatgatgacc 17829
>ref|XM_447041.1| Candida glabrata CBS138, CAGL0H05643g partial mRNA Length = 711 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 211 ggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttc 270 ||||| |||||||||||||| | ||||||||||| ||||| || ||||| |||||| Sbjct: 124 ggtgatgaattcaagggttacaccttcaagatcaccggtggtaacgacaagcaaggtttc 183 Query: 271 ccgatgaagcaagg 284 || ||||||||||| Sbjct: 184 ccaatgaagcaagg 197
>ref|XM_660817.1| Cryptosporidium hominis TU502 ribosomal protein S6e (Chro.20458) partial mRNA Length = 666 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 204 cttcatgggtgaggaattcaagggttatat 233 |||| ||||||||||||||||||||||||| Sbjct: 117 cttcttgggtgaggaattcaagggttatat 146
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 211 ggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttc 270 ||||| |||||||||||||| | ||||||||||| ||||| || ||||| |||||| Sbjct: 560268 ggtgatgaattcaagggttacaccttcaagatcaccggtggtaacgacaagcaaggtttc 560327 Query: 271 ccgatgaagcaagg 284 || ||||||||||| Sbjct: 560328 ccaatgaagcaagg 560341
>ref|XM_626605.1| Cryptosporidium parvum Iowa II 40S ribosomal protein S6 (cgd2_4260), partial mRNA Length = 678 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 204 cttcatgggtgaggaattcaagggttatat 233 |||| ||||||||||||||||||||||||| Sbjct: 129 cttcttgggtgaggaattcaagggttatat 158
>ref|NM_119319.3| Arabidopsis thaliana RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome AT4G31700 (RPS6) mRNA, complete cds Length = 993 Score = 48.1 bits (24), Expect = 0.021 Identities = 57/68 (83%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 12 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 71 Query: 147 gaccagaa 154 |||||||| Sbjct: 72 gaccagaa 79
>ref|XM_746654.1| Aspergillus fumigatus Af293 40S ribosomal protein S6 (Afu4g10800) partial mRNA Length = 714 Score = 48.1 bits (24), Expect = 0.021 Identities = 30/32 (93%) Strand = Plus / Plus Query: 211 ggtgaggaattcaagggttatatcttcaagat 242 ||||| |||||||||||||| ||||||||||| Sbjct: 124 ggtgatgaattcaagggttacatcttcaagat 155
>gb|BT000693.1| Arabidopsis thaliana clone RAFL07-09-P18 (R10989) putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 962 Score = 48.1 bits (24), Expect = 0.021 Identities = 57/68 (83%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 14 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 73 Query: 147 gaccagaa 154 |||||||| Sbjct: 74 gaccagaa 81
>gb|AY113983.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 784 Score = 48.1 bits (24), Expect = 0.021 Identities = 57/68 (83%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 1 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 60 Query: 147 gaccagaa 154 |||||||| Sbjct: 61 gaccagaa 68
>gb|AY050803.1| Arabidopsis thaliana putative ribosomal protein S6 (At4g31700) mRNA, complete cds Length = 989 Score = 48.1 bits (24), Expect = 0.021 Identities = 57/68 (83%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 8 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 67 Query: 147 gaccagaa 154 |||||||| Sbjct: 68 gaccagaa 75
>gb|AF034217.1|AF034217 Arabidopsis thaliana ribosomal protein S6 (rps6) mRNA, complete cds Length = 945 Score = 48.1 bits (24), Expect = 0.021 Identities = 57/68 (83%) Strand = Plus / Plus Query: 87 atgaagttgaacatcgcgaaccccaccacggggtgccagaagaaggtcgagatcgatgac 146 |||||||| ||| | ||||| || || || || |||||||||||| |||||||||| || Sbjct: 4 atgaagttcaacgttgcgaatccaactactggatgccagaagaagctcgagatcgacgat 63 Query: 147 gaccagaa 154 |||||||| Sbjct: 64 gaccagaa 71
>ref|XM_654476.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1964.2), mRNA Length = 714 Score = 46.1 bits (23), Expect = 0.081 Identities = 59/71 (83%) Strand = Plus / Plus Query: 211 ggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttc 270 ||||| |||||||||||||| |||||||||||| ||||| || ||||| |||||| Sbjct: 124 ggtgacgaattcaagggttacctcttcaagatcactggtggtaacgacaagcaaggtttc 183 Query: 271 ccgatgaagca 281 || |||||||| Sbjct: 184 cccatgaagca 194
>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75 Length = 196242 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 120 tgccagaagaaggtcgagatcgatgacgaccagaa 154 |||||||||||| |||||||||| || |||||||| Sbjct: 113539 tgccagaagaagctcgagatcgacgatgaccagaa 113505
>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII project) Length = 90902 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 120 tgccagaagaaggtcgagatcgatgacgaccagaa 154 |||||||||||| |||||||||| || |||||||| Sbjct: 39732 tgccagaagaagctcgagatcgacgatgaccagaa 39766
>emb|BX826399.1|CNS0A4KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 938 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Plus Query: 120 tgccagaagaaggtcgagatcgatgacgaccagaa 154 |||||||||||| |||||||||| || |||||||| Sbjct: 30 tgccagaagaagctcgagatcgacgatgaccagaa 64
>ref|NM_001015548.1| Bos taurus ribosomal protein S6 (RPS6), mRNA Length = 817 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 256 gataagcagggtttcccgatgaagca 281 ||||||||||||||||| |||||||| Sbjct: 198 gataagcagggtttccccatgaagca 223
>ref|XM_449621.1| Candida glabrata CBS138 hypothetical protein (CAGL0M06303g) partial mRNA Length = 711 Score = 44.1 bits (22), Expect = 0.32 Identities = 61/74 (82%) Strand = Plus / Plus Query: 211 ggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttc 270 ||||| |||||||||||||| | ||||||||| | ||||| || ||||| |||||| Sbjct: 124 ggtgatgaattcaagggttacaccttcaagattaccggtggtaacgacaagcaaggtttc 183 Query: 271 ccgatgaagcaagg 284 || ||||||||||| Sbjct: 184 ccaatgaagcaagg 197
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 44.1 bits (22), Expect = 0.32 Identities = 61/74 (82%) Strand = Plus / Minus Query: 211 ggtgaggaattcaagggttatatcttcaagatcatgggtggctgtgataagcagggtttc 270 ||||| |||||||||||||| | ||||||||| | ||||| || ||||| |||||| Sbjct: 654593 ggtgatgaattcaagggttacaccttcaagattaccggtggtaacgacaagcaaggtttc 654534 Query: 271 ccgatgaagcaagg 284 || ||||||||||| Sbjct: 654533 ccaatgaagcaagg 654520
>gb|BC102493.1| Bos taurus ribosomal protein S6, mRNA (cDNA clone MGC:127553 IMAGE:7953793), complete cds Length = 869 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 256 gataagcagggtttcccgatgaagca 281 ||||||||||||||||| |||||||| Sbjct: 211 gataagcagggtttccccatgaagca 236
>gb|AY911358.1| Bos taurus clone IMAGE:7961497 ribosomal protein S6-like mRNA, complete cds Length = 832 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 256 gataagcagggtttcccgatgaagca 281 ||||||||||||||||| |||||||| Sbjct: 211 gataagcagggtttccccatgaagca 236
>gb|BT021025.1| Bos taurus ribosomal protein S6 (RPS6), mRNA, complete cds Length = 817 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 256 gataagcagggtttcccgatgaagca 281 ||||||||||||||||| |||||||| Sbjct: 198 gataagcagggtttccccatgaagca 223
>emb|AL928597.19| Mouse DNA sequence from clone RP23-373N5 on chromosome 4, complete sequence Length = 163961 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 245 tgggtggctgtgataagcaggg 266 |||||||||||||||||||||| Sbjct: 150128 tgggtggctgtgataagcaggg 150149
>emb|AL445208.11| Human DNA sequence from clone RP11-104N3 on chromosome 6, complete sequence Length = 60742 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 aggaggtagttggtgatcttc 207 ||||||||||||||||||||| Sbjct: 14137 aggaggtagttggtgatcttc 14157
>ref|XM_505593.1| Yarrowia lipolytica CLIB122, YALI0F18766g predicted mRNA Length = 729 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagt 287 |||||||||||||| |||||||| ||||| Sbjct: 172 aagcagggtttccccatgaagcagggagt 200
>emb|BX296567.23| Zebrafish DNA sequence from clone DKEY-261P22 in linkage group 15, complete sequence Length = 224041 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgct 290 |||||| ||||||||| |||||||||||| Sbjct: 212982 cagggtatcccgatgatgcaaggagtgct 213010 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 202141 cagggtatcccgatgatgcaaggagtgc 202168
>emb|BX649506.13| Zebrafish DNA sequence from clone DKEY-43L23 in linkage group 22, complete sequence Length = 110752 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 262 cagggtttcccgatgaagcaaggagtgct 290 |||||| ||||||||| |||||||||||| Sbjct: 6787 cagggtatcccgatgatgcaaggagtgct 6759
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 agaagaaggtcgagatcgatg 144 ||||||||||||||||||||| Sbjct: 10410333 agaagaaggtcgagatcgatg 10410353
>gb|AE004483.1| Pseudomonas aeruginosa PAO1, section 44 of 529 of the complete genome Length = 10202 Score = 42.1 bits (21), Expect = 1.3 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 41 gcgtccgggttgctcgccgccggccagct 69 |||||||||||||||||| |||||||||| Sbjct: 1193 gcgtccgggttgctcgcc-ccggccagct 1220
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 ccgccggccagctcgcgccgc 77 ||||||||||||||||||||| Sbjct: 355348 ccgccggccagctcgcgccgc 355328 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gctcgccgccggccagctcg 71 |||||||||||||||||||| Sbjct: 3766152 gctcgccgccggccagctcg 3766171
>dbj|AP005091.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1104_G11 Length = 140093 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 agaagaaggtcgagatcgatg 144 ||||||||||||||||||||| Sbjct: 118038 agaagaaggtcgagatcgatg 118058
>dbj|AP005704.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B03 Length = 147748 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 agaagaaggtcgagatcgatg 144 ||||||||||||||||||||| Sbjct: 10712 agaagaaggtcgagatcgatg 10732
>emb|X02746.1|SCRPS102 Yeast gene for ribosomal protein S10-2 Length = 1500 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 211 ggtgaggaattcaagggttatatcttcaagatc 243 ||||| |||||||||||||| ||||||||||| Sbjct: 673 ggtgacgaattcaagggttacgtcttcaagatc 705
>gb|DQ332961.1| Synthetic construct Saccharomyces cerevisiae clone FLH113093.01X RPS6A gene, complete sequence Length = 1105 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 211 ggtgaggaattcaagggttatatcttcaagatc 243 ||||| |||||||||||||| ||||||||||| Sbjct: 518 ggtgacgaattcaagggttacgtcttcaagatc 550
>gb|U43281.1|SCU43281 Saccharomyces cerevisiae chromosome XVI cosmid 8059/8047 Length = 38669 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 211 ggtgaggaattcaagggttatatcttcaagatc 243 ||||| |||||||||||||| ||||||||||| Sbjct: 29482 ggtgacgaattcaagggttacgtcttcaagatc 29450
>emb|BX649283.16| Zebrafish DNA sequence from clone DKEYP-86C4 in linkage group 14, complete sequence Length = 193551 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 262 cagggtttcccgatgaagcaaggagtgct 290 |||||| ||||||||| |||||||||||| Sbjct: 88942 cagggtatcccgatgatgcaaggagtgct 88914 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 35037 cagggtatcccgatgatgcaaggagtgc 35064
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 259 aagcagggtttcccgatgaagcaaggagt 287 |||||||||||||| |||||||| ||||| Sbjct: 2505687 aagcagggtttccccatgaagcagggagt 2505659
>gb|AY308769.1| Bothus lunatus recombinase activating gene-1 (RAG1) gene, partial cds Length = 1455 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ggaggtagttggtgatcttc 207 |||||||||||||||||||| Sbjct: 1315 ggaggtagttggtgatcttc 1296
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 gttgctcgccgccggccagctcgc 72 ||||||||||||||||| |||||| Sbjct: 101172 gttgctcgccgccggcctgctcgc 101195
>gb|AY430215.1| Spirinchus thaleichthys recombination activating protein 1 (RAG1) gene, partial cds Length = 1472 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ggaggtagttggtgatcttc 207 |||||||||||||||||||| Sbjct: 1335 ggaggtagttggtgatcttc 1316
>gb|AY380539.1| Salangichthys microdon recombination-activating protein 1 (RAG1) gene, partial cds Length = 1506 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ggaggtagttggtgatcttc 207 |||||||||||||||||||| Sbjct: 1342 ggaggtagttggtgatcttc 1323
>gb|AY380538.1| Hypomesus olidus recombination-activating protein 1 (RAG1) gene, partial cds Length = 1555 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ggaggtagttggtgatcttc 207 |||||||||||||||||||| Sbjct: 1364 ggaggtagttggtgatcttc 1345
>gb|AY380537.1| Thaleichthys pacificus recombination-activating protein 1 (RAG1) gene, partial cds Length = 1556 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ggaggtagttggtgatcttc 207 |||||||||||||||||||| Sbjct: 1365 ggaggtagttggtgatcttc 1346
>gb|AY380536.1| Plecoglossus altivelis recombination-activating protein 1 (RAG1) gene, partial cds Length = 1556 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ggaggtagttggtgatcttc 207 |||||||||||||||||||| Sbjct: 1365 ggaggtagttggtgatcttc 1346
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aggtcgagatcgatgacgac 149 |||||||||||||||||||| Sbjct: 2210306 aggtcgagatcgatgacgac 2210325
>ref|XM_612949.2| PREDICTED: Bos taurus similar to bromodomain containing protein 1, transcript variant 1 (LOC533517), mRNA Length = 3549 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cgccgccggccagctcgcgc 74 |||||||||||||||||||| Sbjct: 1117 cgccgccggccagctcgcgc 1098
>ref|XM_882769.1| PREDICTED: Bos taurus similar to bromodomain containing protein 1, transcript variant 2 (LOC533517), mRNA Length = 3174 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 cgccgccggccagctcgcgc 74 |||||||||||||||||||| Sbjct: 1117 cgccgccggccagctcgcgc 1098
>ref|XM_455035.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E24090g predicted mRNA Length = 711 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 211 ggtgaggaattcaagggttatatcttcaagat 242 ||||| |||||||||||||| |||||||||| Sbjct: 124 ggtgatgaattcaagggttacgtcttcaagat 155
>emb|BX950868.13| Zebrafish DNA sequence from clone DKEY-54I3 in linkage group 5, complete sequence Length = 204339 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 137643 cagggtatcccgatgatgcaaggagtgc 137670
>emb|CR847906.11| Zebrafish DNA sequence from clone DKEYP-4C4 in linkage group 6, complete sequence Length = 198346 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 10081 cagggtatcccgatgatgcaaggagtgc 10108
>emb|BX465848.13| Zebrafish DNA sequence from clone RP71-84E6, complete sequence Length = 179411 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 57412 cagggtatcccgatgatgcaaggagtgc 57439
>gb|AY237124.1| Anopheles stephensi ribosomal protein S6 mRNA, complete cds Length = 1526 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 215 aagcagggtttccccatgaagcagggtgtgct 246
>emb|BX066711.1|CNS09NMZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC50AE02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 951 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 516 aagcagggtttccccatgaagcagggtgtgct 547
>emb|BX059515.1|CNS09I33 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC4BE11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 184 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX058216.1|CNS09H30 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC38BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 892 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX056134.1|CNS09FH6 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC35AH10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 245 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX055757.1|CNS09F6P Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC34CA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 561 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX050628.1|CNS09B88 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC27AH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 547 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX030915.1|CNS08W0N Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA46AF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 923 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX048890.1|CNS099VY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC24BE09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 376 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX048575.1|CNS099N7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC23DC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 692 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX047758.1|CNS0990I Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC22BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 192 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX044475.1|CNS096HB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC18AG01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 337 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 159 aagcagggtttccccatgaagcagggtgtgct 190
>emb|BX039668.1|CNS092RS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC10AC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 878 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX037239.1|CNS090WB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA9CE05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 854 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX032182.1|CNS08WZU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47DG10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 648 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX031918.1|CNS08WSI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47CC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 626 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX029508.1|CNS08UXK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA44AD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 905 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX028944.1|CNS08UHW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA43BA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 535 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX028102.1|CNS08TUI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42AB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 625 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX027648.1|CNS08THW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41BE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 777 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 247 aagcagggtttccccatgaagcagggtgtgct 278
>emb|BX027277.1|CNS08T7L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA40DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 622 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX026133.1|CNS08SBT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA4BC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 539 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX025301.1|CNS08ROP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA38DB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 628 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX019556.1|CNS08N94 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA29DD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 126 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX020908.1|CNS08OAO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA30DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 609 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX019904.1|CNS08NIS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA3BD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 869 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 89 aagcagggtttccccatgaagcagggtgtgct 120
>emb|BX017102.1|CNS08LCY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA25CG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 233 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX016862.1|CNS08L6A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA25BD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 555 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX015584.1|CNS08K6S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23BF07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 838 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX015062.1|CNS08JSA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA22CE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 202 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX013131.1|CNS08IAN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA2DB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 922 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX010706.1|CNS08GFA Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA17AG06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 625 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|BX010177.1|CNS08G0L Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA16BE08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 726 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 208 aagcagggtttccccatgaagcagggtgtgct 239
>emb|BX009176.1|CNS08F8S Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA14DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 896 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 86 aagcagggtttccccatgaagcagggtgtgct 117
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 211 ggtgaggaattcaagggttatatcttcaagat 242 ||||| |||||||||||||| |||||||||| Sbjct: 2142829 ggtgatgaattcaagggttacgtcttcaagat 2142860
>emb|BX548011.28| Zebrafish DNA sequence from clone DKEY-237G15, complete sequence Length = 211004 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 10774 cagggtatcccgatgatgcaaggagtgc 10747
>emb|CR790376.10| Zebrafish DNA sequence from clone DKEY-66K12 in linkage group 4, complete sequence Length = 92591 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 64189 cagggtatcccgatgatgcaaggagtgc 64216 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 10785 cagggtatcccgatgatgcaaggagtgc 10812
>emb|BX321871.5| Zebrafish DNA sequence from clone CH211-241N15 in linkage group 8, complete sequence Length = 174723 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 7470 cagggtatcccgatgatgcaaggagtgc 7497
>emb|BX469910.10| Zebrafish DNA sequence from clone CH211-64I20 in linkage group 8, complete sequence Length = 198019 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 98644 cagggtatcccgatgatgcaaggagtgc 98617 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 60957 cagggtatcccgatgatgcaaggagtgc 60984
>emb|BX571711.8| Zebrafish DNA sequence from clone DKEY-57L19 in linkage group 21, complete sequence Length = 193674 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 1969 cagggtatcccgatgatgcaaggagtgc 1942
>ref|XM_692923.1| PREDICTED: Danio rerio similar to FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1 (LOC569529), partial mRNA Length = 3310 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 2334 cagggtatcccgatgatgcaaggagtgc 2361
>ref|XM_685041.1| PREDICTED: Danio rerio similar to zinc finger protein 251 (LOC561629), mRNA Length = 2475 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 1387 cagggtatcccgatgatgcaaggagtgc 1414
>emb|AJ504414.1|KLA504414 Kluyveromyces lactis glr1 gene for putative glutathione oxidoreductase and partial rps6 gene for putative 40S ribosomal protein S6 Length = 3674 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 211 ggtgaggaattcaagggttatatcttcaagat 242 ||||| |||||||||||||| |||||||||| Sbjct: 3600 ggtgatgaattcaagggttacgtcttcaagat 3569
>emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in linkage group 17, complete sequence Length = 247607 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 166901 cagggtatcccgatgatgcaaggagtgc 166928
>gb|S53430.1| S10=ribosomal protein [Kluyveromyces marxianus, Genomic, 1894 nt] Length = 1894 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 211 ggtgaggaattcaagggttatatcttcaagat 242 ||||| |||||||||||||| |||||||||| Sbjct: 1219 ggtgatgaattcaagggttacgtcttcaagat 1250
>emb|BX649307.12| Zebrafish DNA sequence from clone CH211-209P16 in linkage group 4, complete sequence Length = 164976 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 131776 cagggtatcccgatgatgcaaggagtgc 131749
>emb|BX465205.16| Zebrafish DNA sequence from clone CH211-197E7 in linkage group 23, complete sequence Length = 189019 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 40289 cagggtatcccgatgatgcaaggagtgc 40262
>emb|BX539341.8| Zebrafish DNA sequence from clone DKEY-3P4 in linkage group 22, complete sequence Length = 236484 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 52429 cagggtatcccgatgatgcaaggagtgc 52456
>gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosome 15, complete sequence Length = 194306 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gaatctcccaggaggtagtt 197 |||||||||||||||||||| Sbjct: 94900 gaatctcccaggaggtagtt 94881
>emb|BX649341.3| Zebrafish DNA sequence from clone DKEY-199K11 in linkage group 22, complete sequence Length = 148057 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 146300 cagggtatcccgatgatgcaaggagtgc 146327
>emb|BX321870.12| Zebrafish DNA sequence from clone RP71-42A14 in linkage group 22, complete sequence Length = 165445 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 158314 cagggtatcccgatgatgcaaggagtgc 158341
>emb|BX649620.5| Zebrafish DNA sequence from clone DKEY-11N14 in linkage group 20, complete sequence Length = 61794 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 61763 cagggtatcccgatgatgcaaggagtgc 61736
>emb|BX649328.6| Zebrafish DNA sequence from clone DKEY-72L17 in linkage group 20, complete sequence Length = 224173 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 109783 cagggtatcccgatgatgcaaggagtgc 109756
>ref|XM_311986.2| Anopheles gambiae str. PEST ENSANGP00000011100 (ENSANGG00000008611), partial mRNA Length = 1244 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 273 aagcagggtttccccatgaagcagggtgtgct 304
>emb|BX842593.8| Zebrafish DNA sequence from clone DKEY-19K8 in linkage group 20, complete sequence Length = 127151 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 36741 cagggtatcccgatgatgcaaggagtgc 36714
>emb|BX510947.20| Zebrafish DNA sequence from clone DKEY-226F16 in linkage group 4, complete sequence Length = 125275 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 49088 cagggtatcccgatgatgcaaggagtgc 49115
>emb|CR854899.16| Zebrafish DNA sequence from clone CH211-268B14 in linkage group 14, complete sequence Length = 142230 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 262 cagggtttcccgatgaagcaaggagtgc 289 |||||| ||||||||| ||||||||||| Sbjct: 99595 cagggtatcccgatgatgcaaggagtgc 99622
>tpe|BN000162.1|AGA000162 TPA: TPA_inf: Anopheles gambiae str. PEST rpS6 gene for ribosomal protein S6 Length = 1988 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 259 aagcagggtttcccgatgaagcaaggagtgct 290 |||||||||||||| |||||||| || ||||| Sbjct: 766 aagcagggtttccccatgaagcagggtgtgct 797 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,433,460 Number of Sequences: 3902068 Number of extensions: 2433460 Number of successful extensions: 44267 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 140 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 43653 Number of HSP's gapped (non-prelim): 604 length of query: 376 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 354 effective length of database: 17,147,199,772 effective search space: 6070108719288 effective search space used: 6070108719288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)