>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 1156

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
 Frame = +1

Query: 82  RNHRSVISLLPST*---IHAENCPRQLFRRIWFPFLPWHPLLAG*VHLS--FYSSLDTIL 246
           R+H S I   PS      H E  PRQ  RR W    P  P  A  VH+S    SSL+T L
Sbjct: 87  RDHDSPIEAAPSPDGRRFHVEGAPRQGGRRRWDEGAPTPPTAAAPVHVSDPTRSSLNTQL 146

>NOTC4_MOUSE (P31695) Neurogenic locus notch homolog protein 4 precursor (Notch 4)|
            [Contains: Transforming protein Int-3; Notch 4
            extracellular truncation; Notch 4 intracellular domain]
          Length = 1964

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -1

Query: 215  RCTHPARSGCQGRKGNQIRRKSCRGQFSAWIHVEGNKLITDLW 87
            RC  P  SGC+GR G+      C G    W   + +  + D W
Sbjct: 1165 RCQRPGASGCEGRGGDGTCDAGCSGPGGDWDGGDCSLGVPDPW 1207

>GSA_CHLRE (Q39566) Glutamate-1-semialdehyde 2,1-aminomutase, chloroplast|
           precursor (EC 5.4.3.8) (GSA) (Glutamate-1-semialdehyde
           aminotransferase) (GSA-AT)
          Length = 463

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 119 RESTRKIARGNFSGGFGFPFCLGIHSLLGECTSAST 226
           +E + +I  GN SG FGF FC G  +   +  +A T
Sbjct: 378 KEHSHEITGGNISGMFGFFFCKGPVTCFEDALAADT 413

>NOTC4_HUMAN (Q99466) Neurogenic locus notch homolog protein 4 precursor (Notch 4)|
            (hNotch4) [Contains: Notch 4 extracellular truncation;
            Notch 4 intracellular domain]
          Length = 2003

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = -1

Query: 215  RCTHPARSGCQGRKGNQIRRKSCRGQFSAWIHVEGNKLITDLW 87
            RC  P   GC+GR G+      C G    W   + +  + D W
Sbjct: 1169 RCQKPGAKGCEGRSGDGACDAGCSGPGGNWDGGDCSLGVPDPW 1211

>CDC5_YEAST (P32562) Cell cycle serine/threonine-protein kinase CDC5/MSD2 (EC|
           2.7.11.21)
          Length = 705

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +2

Query: 143 RGNFSGGFGFPFCLGIHSLLGECTSASTLV*IQYYSTKTRRSIQDAI 283
           RG+F G  GF  C  I    GE  +A T+      S KTR+ +   I
Sbjct: 84  RGHFLGEGGFARCFQIKDDSGEIFAAKTVAKASIKSEKTRKKLLSEI 130


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,154,595
Number of Sequences: 219361
Number of extensions: 921736
Number of successful extensions: 2556
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2556
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)