ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast26g11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191560.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1440 Score = 83.8 bits (42), Expect = 1e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 11 accgtcgtcctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgcc 70 ||||| || ||||| || |||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 10 accgtggtgctgtatcccggcctcggcgtcggccacctggtgccgatggttgagctggcc 69 Query: 71 aagctgttcctcaagcacggcctggccgtcaccatggc 108 ||| |||||||| |||||||| || |||||| |||| Sbjct: 70 aaggtgttcctccgccacggcctcgcggtcaccgtggc 107
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 83.8 bits (42), Expect = 1e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 11 accgtcgtcctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgcc 70 ||||| || ||||| || |||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 30640896 accgtggtgctgtatcccggcctcggcgtcggccacctggtgccgatggttgagctggcc 30640955 Query: 71 aagctgttcctcaagcacggcctggccgtcaccatggc 108 ||| |||||||| |||||||| || |||||| |||| Sbjct: 30640956 aaggtgttcctccgccacggcctcgcggtcaccgtggc 30640993 Score = 58.0 bits (29), Expect = 8e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 11 accgtcgtcctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgcc 70 ||||||||||||||||| ||| ||||||||||||| | || || ||| | ||| ||||| Sbjct: 30648681 accgtcgtcctgtaccccggcggcggcgtcggccacgtcgtccccatgctggagctcgcc 30648740 Query: 71 aagctgttcctcaagcacggcctggccgtcaccatgg 107 ||| | ||| |||||||||| | | ||||||||||| Sbjct: 30648741 aaggtcttcgtcaagcacgggcacgacgtcaccatgg 30648777
>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0036G09 Length = 124118 Score = 83.8 bits (42), Expect = 1e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 11 accgtcgtcctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgcc 70 ||||| || ||||| || |||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 123500 accgtggtgctgtatcccggcctcggcgtcggccacctggtgccgatggttgagctggcc 123559 Query: 71 aagctgttcctcaagcacggcctggccgtcaccatggc 108 ||| |||||||| |||||||| || |||||| |||| Sbjct: 123560 aaggtgttcctccgccacggcctcgcggtcaccgtggc 123597
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 83.8 bits (42), Expect = 1e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 11 accgtcgtcctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgcc 70 ||||| || ||||| || |||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 83173 accgtggtgctgtatcccggcctcggcgtcggccacctggtgccgatggttgagctggcc 83232 Query: 71 aagctgttcctcaagcacggcctggccgtcaccatggc 108 ||| |||||||| |||||||| || |||||| |||| Sbjct: 83233 aaggtgttcctccgccacggcctcgcggtcaccgtggc 83270 Score = 58.0 bits (29), Expect = 8e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 11 accgtcgtcctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgcc 70 ||||||||||||||||| ||| ||||||||||||| | || || ||| | ||| ||||| Sbjct: 90958 accgtcgtcctgtaccccggcggcggcgtcggccacgtcgtccccatgctggagctcgcc 91017 Query: 71 aagctgttcctcaagcacggcctggccgtcaccatgg 107 ||| | ||| |||||||||| | | ||||||||||| Sbjct: 91018 aaggtcttcgtcaagcacgggcacgacgtcaccatgg 91054
>dbj|AK119562.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B10, full insert sequence Length = 1817 Score = 83.8 bits (42), Expect = 1e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 11 accgtcgtcctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgcc 70 ||||| || ||||| || |||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 126 accgtggtgctgtatcccggcctcggcgtcggccacctggtgccgatggttgagctggcc 185 Query: 71 aagctgttcctcaagcacggcctggccgtcaccatggc 108 ||| |||||||| |||||||| || |||||| |||| Sbjct: 186 aaggtgttcctccgccacggcctcgcggtcaccgtggc 223
>dbj|AK103129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119O19, full insert sequence Length = 1831 Score = 83.8 bits (42), Expect = 1e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 11 accgtcgtcctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgcc 70 ||||| || ||||| || |||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 127 accgtggtgctgtatcccggcctcggcgtcggccacctggtgccgatggttgagctggcc 186 Query: 71 aagctgttcctcaagcacggcctggccgtcaccatggc 108 ||| |||||||| |||||||| || |||||| |||| Sbjct: 187 aaggtgttcctccgccacggcctcgcggtcaccgtggc 224
>dbj|AK065450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013008B02, full insert sequence Length = 1647 Score = 83.8 bits (42), Expect = 1e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 11 accgtcgtcctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgcc 70 ||||| || ||||| || |||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 109 accgtggtgctgtatcccggcctcggcgtcggccacctggtgccgatggttgagctggcc 168 Query: 71 aagctgttcctcaagcacggcctggccgtcaccatggc 108 ||| |||||||| |||||||| || |||||| |||| Sbjct: 169 aaggtgttcctccgccacggcctcgcggtcaccgtggc 206
>ref|NM_191561.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 58.0 bits (29), Expect = 8e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 11 accgtcgtcctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgcc 70 ||||||||||||||||| ||| ||||||||||||| | || || ||| | ||| ||||| Sbjct: 10 accgtcgtcctgtaccccggcggcggcgtcggccacgtcgtccccatgctggagctcgcc 69 Query: 71 aagctgttcctcaagcacggcctggccgtcaccatgg 107 ||| | ||| |||||||||| | | ||||||||||| Sbjct: 70 aaggtcttcgtcaagcacgggcacgacgtcaccatgg 106
>dbj|AK102415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093B13, full insert sequence Length = 1779 Score = 58.0 bits (29), Expect = 8e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 11 accgtcgtcctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgcc 70 ||||||||||||||||| ||| ||||||||||||| | || || ||| | ||| ||||| Sbjct: 119 accgtcgtcctgtaccccggcggcggcgtcggccacgtcgtccccatgctggagctcgcc 178 Query: 71 aagctgttcctcaagcacggcctggccgtcaccatgg 107 ||| | ||| |||||||||| | | ||||||||||| Sbjct: 179 aaggtcttcgtcaagcacgggcacgacgtcaccatgg 215
>dbj|AK061830.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D01, full insert sequence Length = 1664 Score = 58.0 bits (29), Expect = 8e-06 Identities = 80/97 (82%) Strand = Plus / Plus Query: 11 accgtcgtcctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgcc 70 ||||||||||||||||| ||| ||||||||||||| | || || ||| | ||| ||||| Sbjct: 70 accgtcgtcctgtaccccggcggcggcgtcggccacgtcgtccccatgctggagctcgcc 129 Query: 71 aagctgttcctcaagcacggcctggccgtcaccatgg 107 ||| | ||| |||||||||| | | ||||||||||| Sbjct: 130 aaggtcttcgtcaagcacgggcacgacgtcaccatgg 166
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 54.0 bits (27), Expect = 1e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 20 ctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgccaagctgttc 79 |||||||| ||| |||||||||||||||| | ||||||| ||||| | |||||| |||| Sbjct: 155777 ctgtacccgggcgtcggcgtcggccacctcgcgccgatgctcgagctggccaaggcgttc 155718 Query: 80 ctc 82 ||| Sbjct: 155717 ctc 155715
>gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence Length = 130987 Score = 46.1 bits (23), Expect = 0.032 Identities = 53/63 (84%) Strand = Plus / Minus Query: 20 ctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgccaagctgttc 79 ||||| || ||| |||||||||||||||| | ||||||| ||||| | |||||| |||| Sbjct: 81126 ctgtatccgggcgtcggcgtcggccacctcgcgccgatgctcgagctggccaaggcgttc 81067 Query: 80 ctc 82 ||| Sbjct: 81066 ctc 81064 Score = 46.1 bits (23), Expect = 0.032 Identities = 53/63 (84%) Strand = Plus / Minus Query: 20 ctgtaccctggcctcggcgtcggccacctggtgccgatggtcgaggtcgccaagctgttc 79 ||||| || ||| |||||||||||||||| | ||||||| ||||| | |||||| |||| Sbjct: 78223 ctgtatccgggcgtcggcgtcggccacctcgcgccgatgctcgagctggccaaggcgttc 78164 Query: 80 ctc 82 ||| Sbjct: 78163 ctc 78161
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cctcaagcacggcctggccg 98 |||||||||||||||||||| Sbjct: 5308887 cctcaagcacggcctggccg 5308906 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 cacctggtgccgatggtcg 62 ||||||||||||||||||| Sbjct: 5289280 cacctggtgccgatggtcg 5289262
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ggccgtcaccatggcgctcg 113 |||||||||||||||||||| Sbjct: 104316 ggccgtcaccatggcgctcg 104335
>gb|AE004709.1| Pseudomonas aeruginosa PAO1, section 270 of 529 of the complete genome Length = 9970 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cctcaagcacggcctggccg 98 |||||||||||||||||||| Sbjct: 9786 cctcaagcacggcctggccg 9805
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 2.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 cggcctggccgtcaccatggcgct 111 |||||||||| ||||||||||||| Sbjct: 2718635 cggcctggccatcaccatggcgct 2718658
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ggccgtcaccatggcgctcg 113 |||||||||||||||||||| Sbjct: 3689491 ggccgtcaccatggcgctcg 3689472
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cctcaagcacggcctggccg 98 |||||||||||||||||||| Sbjct: 1651713 cctcaagcacggcctggccg 1651694
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cctcaagcacggcctggccg 98 |||||||||||||||||||| Sbjct: 2094140 cctcaagcacggcctggccg 2094121
>emb|AJ628149.4| Micromonospora echinospora genomic region of the gentamicin biosynthesis gene cluster, strain DSM 43036 Length = 84222 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gatggtcgaggtcgccaagc 74 |||||||||||||||||||| Sbjct: 3308 gatggtcgaggtcgccaagc 3327
>gb|AF440524.1| Pseudomonas aeruginosa strain SG17M genomic sequence, integrated gene island PAGI-3(SG) Length = 128136 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cctcaagcacggcctggccg 98 |||||||||||||||||||| Sbjct: 5848 cctcaagcacggcctggccg 5829
>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C) Length = 158230 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cctcaagcacggcctggccg 98 |||||||||||||||||||| Sbjct: 17108 cctcaagcacggcctggccg 17089
>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048I21, complete sequence Length = 137650 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 78 tcctcaagcacggcctggccgtc 100 |||||||||||||||| |||||| Sbjct: 22974 tcctcaagcacggcctcgccgtc 22952
>ref|XM_475262.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2568 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 tcctcaagcacggcctggccgtc 100 |||||||||||||||| |||||| Sbjct: 1961 tcctcaagcacggcctcgccgtc 1983
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 38.2 bits (19), Expect = 7.9 Identities = 25/27 (92%) Strand = Plus / Minus Query: 23 taccctggcctcggcgtcggccacctg 49 ||||| ||||||| ||||||||||||| Sbjct: 117223 taccccggcctcgccgtcggccacctg 117197
>gb|AY593479.1| Collimonas fungivorans fosmid CFUFOS19, complete sequence Length = 38984 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 ctcggcgtcggccacctgg 50 ||||||||||||||||||| Sbjct: 19164 ctcggcgtcggccacctgg 19146
>gb|AY303753.1| Takifugu rubripes erythropoietin (EPO) gene, complete cds, alternatively spliced Length = 63527 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 78 tcctcaagcacggcctggccgtc 100 ||||| ||||||||||||||||| Sbjct: 42452 tcctccagcacggcctggccgtc 42430
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 78 tcctcaagcacggcctggccgtc 100 |||||||||||||||| |||||| Sbjct: 151997 tcctcaagcacggcctcgccgtc 151975
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence Length = 236455 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 cgaggtcgccaagctgttc 79 ||||||||||||||||||| Sbjct: 65288 cgaggtcgccaagctgttc 65270
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 cctggtgccgatggtcgag 64 ||||||||||||||||||| Sbjct: 3964647 cctggtgccgatggtcgag 3964629
>emb|BX927300.16| Zebrafish DNA sequence from clone DKEY-1F1 in linkage group 14, complete sequence Length = 101779 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 cctggtgccgatggtcgag 64 ||||||||||||||||||| Sbjct: 56539 cctggtgccgatggtcgag 56557
>ref|XM_964777.1| PREDICTED: Tribolium castaneum similar to CG32447-PB, isoform B (LOC658383), mRNA Length = 1296 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 94 ggccgtcaccatggcgctc 112 ||||||||||||||||||| Sbjct: 261 ggccgtcaccatggcgctc 279
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 44 cacctggtgccgatggtcgaggt 66 |||||||||||| |||||||||| Sbjct: 156103 cacctggtgccgctggtcgaggt 156081
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 44 cacctggtgccgatggtcgaggt 66 |||||||||||| |||||||||| Sbjct: 79174 cacctggtgccgctggtcgaggt 79152
>emb|AL451019.1|NCB9I2 Neurospora crassa DNA linkage group II BAC clone B9I2 Length = 72652 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 gccgtcaccatggcgctcg 113 ||||||||||||||||||| Sbjct: 13563 gccgtcaccatggcgctcg 13581
>emb|AL355928.2|NCB1D4 Neurospora crassa DNA linkage group II BAC clone B1D4 Length = 74417 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 gccgtcaccatggcgctcg 113 ||||||||||||||||||| Sbjct: 26654 gccgtcaccatggcgctcg 26672
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 cctggtgccgatggtcgag 64 ||||||||||||||||||| Sbjct: 3642063 cctggtgccgatggtcgag 3642045
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 86 cacggcctggccgtcaccatggc 108 |||||||||||||||||| |||| Sbjct: 2423743 cacggcctggccgtcaccctggc 2423765
>gb|AF022214.1| Mycobacteriophage D29, complete genome Length = 49136 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 45 acctggtgccgatggtcgaggtc 67 ||||||||||||||| ||||||| Sbjct: 42822 acctggtgccgatggacgaggtc 42800
>gb|AF325922.1|AF325922 Takifugu rubripes omega class glutathione-S-transferase, PTEN, 3'-phosphoadenosine 5'-phosphosulfate synthase 2, multiple inositol polyphosphate phosphatase 1, and hypothetical protein genes, complete cds; and multiple inositol polyphosphate phosphatase 2 gene, partial cds Length = 55902 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 cgaggtcgccaagctgttc 79 ||||||||||||||||||| Sbjct: 44350 cgaggtcgccaagctgttc 44332
>gb|U22406.1|AH005385S6 Human parathyroid hormone/PTH-related peptide receptor (PTH/PTHrP) gene, exons 9 and 10 Length = 713 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 tcctgtaccctggcctcgg 36 ||||||||||||||||||| Sbjct: 337 tcctgtaccctggcctcgg 355
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 ggtcgaggtcgccaagctg 76 ||||||||||||||||||| Sbjct: 4243026 ggtcgaggtcgccaagctg 4243008
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 aggtcgccaagctgttcct 81 ||||||||||||||||||| Sbjct: 1500976 aggtcgccaagctgttcct 1500994
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 ggtcgaggtcgccaagctg 76 ||||||||||||||||||| Sbjct: 1451600 ggtcgaggtcgccaagctg 1451582
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 78 tcctcaagcacggcctggccgtc 100 |||||||||||||||| |||||| Sbjct: 20896196 tcctcaagcacggcctcgccgtc 20896174
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 109 gctcgtcgagccgcaggtc 127 ||||||||||||||||||| Sbjct: 4269129 gctcgtcgagccgcaggtc 4269147 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 ccacctggtgccgatggtc 61 ||||||||||||||||||| Sbjct: 2203112 ccacctggtgccgatggtc 2203094
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 tcggcgtcggccacctggt 51 ||||||||||||||||||| Sbjct: 3478471 tcggcgtcggccacctggt 3478489 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 109 gctcgtcgagccgcaggtc 127 ||||||||||||||||||| Sbjct: 3309114 gctcgtcgagccgcaggtc 3309096
>dbj|AK105917.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H11, full insert sequence Length = 1587 Score = 38.2 bits (19), Expect = 7.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 23 taccctggcctcggcgtcggccacctg 49 ||||| ||||||| ||||||||||||| Sbjct: 130 taccccggcctcgccgtcggccacctg 156
>dbj|AK099026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127L05, full insert sequence Length = 1581 Score = 38.2 bits (19), Expect = 7.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 23 taccctggcctcggcgtcggccacctg 49 ||||| ||||||| ||||||||||||| Sbjct: 126 taccccggcctcgccgtcggccacctg 152
>dbj|AK071910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064H13, full insert sequence Length = 1587 Score = 38.2 bits (19), Expect = 7.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 23 taccctggcctcggcgtcggccacctg 49 ||||| ||||||| ||||||||||||| Sbjct: 132 taccccggcctcgccgtcggccacctg 158
>dbj|AK061594.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E11, full insert sequence Length = 1858 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 78 tcctcaagcacggcctggccgtc 100 |||||||||||||||| |||||| Sbjct: 1095 tcctcaagcacggcctcgccgtc 1117
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 cctggtgccgatggtcgag 64 ||||||||||||||||||| Sbjct: 3639489 cctggtgccgatggtcgag 3639471
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 88 cggcctggccgtcaccatg 106 ||||||||||||||||||| Sbjct: 884149 cggcctggccgtcaccatg 884167
>gb|U39393.1|PCU39393 Penicillium chrysogenum adenosine-5'phosphosulfate kinase gene, complete cds Length = 977 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 cgaggtcgccaagctgttc 79 ||||||||||||||||||| Sbjct: 556 cgaggtcgccaagctgttc 574
>gb|U24182.1|TAU24182 Triticum aestivum homolog to gram-negative bacteria Transposon Tn1721, partial sequence Length = 755 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 ctgttcctcaagcacggcc 92 ||||||||||||||||||| Sbjct: 606 ctgttcctcaagcacggcc 588 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 896,909 Number of Sequences: 3902068 Number of extensions: 896909 Number of successful extensions: 66292 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63836 Number of HSP's gapped (non-prelim): 2456 length of query: 163 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 141 effective length of database: 17,147,199,772 effective search space: 2417755167852 effective search space used: 2417755167852 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
