>HDA2_ASHGO (Q75EZ7) HDA1 complex subunit 2 (Histone deacetylase complex 1|
           subunit 2)
          Length = 665

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +2

Query: 287 EHGEQLRRRQHSLSELTYSRDDDAKLETTRARL 385
           E    LRRR+  L EL  S D D+++ + RARL
Sbjct: 499 EKSAHLRRRKAELEELLASSDLDSRVSSKRARL 531

>CLC3A_HUMAN (O75596) C-type lectin domain family 3 member A precursor (C-type|
           lectin superfamily member 1) (Cartilage-derived C-type
           lectin)
          Length = 197

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +2

Query: 254 LSVTLALSSPTEHGEQLRRRQHSLSELTYSRDDDAKLETTRARLLGVLKGMK 409
           L +TL L   T H  +L+ R+HS   +   RD D  L+T   +L   +  +K
Sbjct: 11  LVITLLLDQTTSHTSRLKARKHSKRRV---RDKDGDLKTQIEKLWTEVNALK 59

>RT31_HUMAN (Q92665) 28S ribosomal protein S31, mitochondrial precursor (S31mt)|
           (MRP-S31) (Imogen 38)
          Length = 395

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 341 SRDDDAKLETTRARLLGVLKGMKI 412
           S   D++ E T+  LLG++KGMK+
Sbjct: 85  SESQDSEKENTKKDLLGIIKGMKV 108


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.133    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,185,921
Number of Sequences: 219361
Number of extensions: 552003
Number of successful extensions: 2107
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2107
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)