ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast26f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121280.1| Oryza sativa (japonica cultivar-group) cDNA clon... 438 e-120
2ref|XM_476941.1| Oryza sativa (japonica cultivar-group), mRNA 434 e-118
3gb|AF045770.1|AF045770 Oryza sativa methylmalonate semi-aldehyde... 414 e-112
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-61
5dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-61
6dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-61
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
8dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
9dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
10gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.39
11gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete... 42 1.5
12gb|AY129447.1| Drosophila melanogaster LD22337 full insert cDNA 42 1.5
13ref|NM_169815.2| Drosophila melanogaster CG31122-RA (CG31122), mRNA 42 1.5
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.5
16dbj|AP005254.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
17dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
18gb|AE003722.4| Drosophila melanogaster chromosome 3R, section 60... 42 1.5
19gb|AE010455.1| Methanopyrus kandleri AV19 section 154 of 157 of ... 40 6.1
20ref|XM_510018.1| PREDICTED: Pan troglodytes similar to KIAA1200 ... 40 6.1
21ref|XM_480929.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
22ref|XM_480241.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
23ref|XM_960462.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.1
24ref|XM_329113.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.1
25ref|NM_020715.1| Homo sapiens pleckstrin homology domain contain... 40 6.1
26gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.1
27emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 40 6.1
28gb|AC024585.6| Homo sapiens chromosome 19 clone LLNLF-194E9, com... 40 6.1
29gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.1
30dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
31dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
32dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
33dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
34dbj|AK101600.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
35dbj|AK067233.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
36emb|AL132640.4|CNS01DT5 Human chromosome 14 DNA sequence BAC R-6... 40 6.1
37gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 6.1
38dbj|AB033026.1| Homo sapiens mRNA for KIAA1200 protein, partial cds 40 6.1 
>dbj|AK121280.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108H13, full
           insert sequence
          Length = 1945

 Score =  438 bits (221), Expect = e-120
 Identities = 354/397 (89%), Gaps = 6/397 (1%)
 Strand = Plus / Plus

                                                                       
Query: 56  cgatgctccgcgccgtcctcctccgctcagcctccggcctccgccggtcgccgatggccg 115
           ||||||||||||||| |||||||||||||| |||||||||||||||| | || |||||||
Sbjct: 107 cgatgctccgcgccgccctcctccgctcaggctccggcctccgccggcctcccatggccg 166

                                                                       
Query: 116 ccccgctatccaccgccgccgcc---tcgtggctcgctgagggggcctcgtcgtcgccgc 172
           | ||||| |||||||||||||||   ||||||||| | ||  | ||||||||    ||||
Sbjct: 167 cgccgctctccaccgccgccgccgcctcgtggctctccgacagcgcctcgtct---ccgc 223

                                                                       
Query: 173 ccagggtgcgcctcctcatcggcggcgacttcgtcgagtccaaggccactgagcacgtcg 232
           | ||||||||||||||||||||||| || |||||||||||   ||||   ||||||||||
Sbjct: 224 ctagggtgcgcctcctcatcggcggggagttcgtcgagtcgcgggccgacgagcacgtcg 283

                                                                       
Query: 233 acgtcaccaaccccgcgacgcaggaggtggtgtcccggatcccgctcaccaccgccgacg 292
           |||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 284 acgtcaccaatccggcgacgcaggaggtggtgtcgcggatcccgctcaccaccgccgacg 343

                                                                       
Query: 293 agttcagggccgccgtggacgctgccaggaccgccttccctggctggcggagcacgccgg 352
           |||||||||||||||||||||| ||||||||||||||||| || ||||||| ||||||||
Sbjct: 344 agttcagggccgccgtggacgccgccaggaccgccttccccgggtggcggaacacgccgg 403

                                                                       
Query: 353 tcacggcgcggcagcgcatcatgttcaaataccaggagctcatccgggccaacatggata 412
           | ||  ||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 404 tgaccacgcggcagcgcatcatgctcaagtaccaggagctcatccgggccaacatggata 463

                                                
Query: 413 agctggcagagaacattacaaccgagcagggaaagac 449
           | ||||||||||||||||||||||| ||||| |||||
Sbjct: 464 aactggcagagaacattacaaccgaacaggggaagac 500
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>ref|XM_476941.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1605

 Score =  434 bits (219), Expect = e-118
 Identities = 352/395 (89%), Gaps = 6/395 (1%)
 Strand = Plus / Plus

                                                                       
Query: 58  atgctccgcgccgtcctcctccgctcagcctccggcctccgccggtcgccgatggccgcc 117
           ||||||||||||| |||||||||||||| |||||||||||||||| | || |||||||| 
Sbjct: 1   atgctccgcgccgccctcctccgctcaggctccggcctccgccggcctcccatggccgcg 60

                                                                       
Query: 118 ccgctatccaccgccgccgcc---tcgtggctcgctgagggggcctcgtcgtcgccgccc 174
           ||||| |||||||||||||||   ||||||||| | ||  | ||||||||    ||||| 
Sbjct: 61  ccgctctccaccgccgccgccgcctcgtggctctccgacagcgcctcgtct---ccgcct 117

                                                                       
Query: 175 agggtgcgcctcctcatcggcggcgacttcgtcgagtccaaggccactgagcacgtcgac 234
           ||||||||||||||||||||||| || |||||||||||   ||||   ||||||||||||
Sbjct: 118 agggtgcgcctcctcatcggcggggagttcgtcgagtcgcgggccgacgagcacgtcgac 177

                                                                       
Query: 235 gtcaccaaccccgcgacgcaggaggtggtgtcccggatcccgctcaccaccgccgacgag 294
           |||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 178 gtcaccaatccggcgacgcaggaggtggtgtcgcggatcccgctcaccaccgccgacgag 237

                                                                       
Query: 295 ttcagggccgccgtggacgctgccaggaccgccttccctggctggcggagcacgccggtc 354
           |||||||||||||||||||| ||||||||||||||||| || ||||||| ||||||||| 
Sbjct: 238 ttcagggccgccgtggacgccgccaggaccgccttccccgggtggcggaacacgccggtg 297

                                                                       
Query: 355 acggcgcggcagcgcatcatgttcaaataccaggagctcatccgggccaacatggataag 414
           ||  ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| 
Sbjct: 298 accacgcggcagcgcatcatgctcaagtaccaggagctcatccgggccaacatggataaa 357

                                              
Query: 415 ctggcagagaacattacaaccgagcagggaaagac 449
           ||||||||||||||||||||||| ||||| |||||
Sbjct: 358 ctggcagagaacattacaaccgaacaggggaagac 392
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>gb|AF045770.1|AF045770 Oryza sativa methylmalonate semi-aldehyde dehydrogenase (MMSDH1)
           mRNA, complete cds
          Length = 1864

 Score =  414 bits (209), Expect = e-112
 Identities = 351/397 (88%), Gaps = 6/397 (1%)
 Strand = Plus / Plus

                                                                       
Query: 56  cgatgctccgcgccgtcctcctccgctcagcctccggcctccgccggtcgccgatggccg 115
           ||||||||||||||| |||||||||||||| |||||||||||||||| | || |||||||
Sbjct: 103 cgatgctccgcgccgccctcctccgctcaggctccggcctccgccggcctcccatggccg 162

                                                                       
Query: 116 ccccgctatccaccgccgccgcc---tcgtggctcgctgagggggcctcgtcgtcgccgc 172
           | ||||| |||||||||||||||   ||||||||| | ||  | ||||||||    ||||
Sbjct: 163 cgccgctctccaccgccgccgccgcctcgtggctctccgacagcgcctcgtct---ccgc 219

                                                                       
Query: 173 ccagggtgcgcctcctcatcggcggcgacttcgtcgagtccaaggccactgagcacgtcg 232
           | ||||||||||||||||||||||| || |||||||||||   ||||   ||||||||||
Sbjct: 220 ctagggtgcgcctcctcatcggcggggagttcgtcgagtcgcgggccgacgagcacgtcg 279

                                                                       
Query: 233 acgtcaccaaccccgcgacgcaggaggtggtgtcccggatcccgctcaccaccgccgacg 292
           |||||||||| || ||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 280 acgtcaccaatccggcgacgcaggaagtggtgtcgcggatcccgctcaccaccgccgacg 339

                                                                       
Query: 293 agttcagggccgccgtggacgctgccaggaccgccttccctggctggcggagcacgccgg 352
           | |||||||||||||||||||| ||||||||||||||||| || ||||||| ||||||||
Sbjct: 340 aattcagggccgccgtggacgccgccaggaccgccttccccgggtggcggaacacgccgg 399

                                                                       
Query: 353 tcacggcgcggcagcgcatcatgttcaaataccaggagctcatccgggccaacatggata 412
           | ||  ||||||||||||||||| |||| | |||||||||||||||||||||||||||||
Sbjct: 400 tgaccacgcggcagcgcatcatgctcaagttccaggagctcatccgggccaacatggata 459

                                                
Query: 413 agctggcagagaacattacaaccgagcagggaaagac 449
           | ||||||||||||||||||||||| ||||| |||||
Sbjct: 460 aactggcagagaacattacaaccgaacaggggaagac 496
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  244 bits (123), Expect = 2e-61
 Identities = 153/163 (93%)
 Strand = Plus / Plus

                                                                           
Query: 247     gcgacgcaggaggtggtgtcccggatcccgctcaccaccgccgacgagttcagggccgcc 306
               |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4767339 gcgacgcaggaggtggtgtcgcggatcccgctcaccaccgccgacgagttcagggccgcc 4767398

                                                                           
Query: 307     gtggacgctgccaggaccgccttccctggctggcggagcacgccggtcacggcgcggcag 366
               |||||||| ||||||||||||||||| || ||||||| ||||||||| ||  ||||||||
Sbjct: 4767399 gtggacgccgccaggaccgccttccccgggtggcggaacacgccggtgaccacgcggcag 4767458

                                                          
Query: 367     cgcatcatgttcaaataccaggagctcatccgggccaacatgg 409
               ||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 4767459 cgcatcatgctcaagtaccaggagctcatccgggccaacatgg 4767501



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                           
Query: 175     agggtgcgcctcctcatcggcggcgacttcgtcgagtccaaggccactgagcacgtcgac 234
               ||||||||||||||||||||||| || |||||||||||   ||||   ||||||||||||
Sbjct: 4767178 agggtgcgcctcctcatcggcggggagttcgtcgagtcgcgggccgacgagcacgtcgac 4767237

                       
Query: 235     gtcaccaa 242
               ||||||||
Sbjct: 4767238 gtcaccaa 4767245



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                   
Query: 87      ctccggcctccgccggtcgccgatggccgccccgctatccaccgccgccgcc 138
               |||||||||||||||| | || |||||||| ||||| |||||||||||||||
Sbjct: 4766999 ctccggcctccgccggcctcccatggccgcgccgctctccaccgccgccgcc 4767050



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                         
Query: 408     ggataagctggcagagaacattacaaccgagcagggaaagac 449
               |||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 4767623 ggataaactggcagagaacattacaaccgaacaggggaagac 4767664



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                             
Query: 56      cgatgctccgcgccgtcctcctccgctcag 85
               ||||||||||||||| ||||||||||||||
Sbjct: 4766883 cgatgctccgcgccgccctcctccgctcag 4766912
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>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0084L07
          Length = 127992

 Score =  244 bits (123), Expect = 2e-61
 Identities = 153/163 (93%)
 Strand = Plus / Plus

                                                                         
Query: 247   gcgacgcaggaggtggtgtcccggatcccgctcaccaccgccgacgagttcagggccgcc 306
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 85249 gcgacgcaggaggtggtgtcgcggatcccgctcaccaccgccgacgagttcagggccgcc 85308

                                                                         
Query: 307   gtggacgctgccaggaccgccttccctggctggcggagcacgccggtcacggcgcggcag 366
             |||||||| ||||||||||||||||| || ||||||| ||||||||| ||  ||||||||
Sbjct: 85309 gtggacgccgccaggaccgccttccccgggtggcggaacacgccggtgaccacgcggcag 85368

                                                        
Query: 367   cgcatcatgttcaaataccaggagctcatccgggccaacatgg 409
             ||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 85369 cgcatcatgctcaagtaccaggagctcatccgggccaacatgg 85411



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                         
Query: 175   agggtgcgcctcctcatcggcggcgacttcgtcgagtccaaggccactgagcacgtcgac 234
             ||||||||||||||||||||||| || |||||||||||   ||||   ||||||||||||
Sbjct: 85088 agggtgcgcctcctcatcggcggggagttcgtcgagtcgcgggccgacgagcacgtcgac 85147

                     
Query: 235   gtcaccaa 242
             ||||||||
Sbjct: 85148 gtcaccaa 85155



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 87    ctccggcctccgccggtcgccgatggccgccccgctatccaccgccgccgcc 138
             |||||||||||||||| | || |||||||| ||||| |||||||||||||||
Sbjct: 84909 ctccggcctccgccggcctcccatggccgcgccgctctccaccgccgccgcc 84960



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 408   ggataagctggcagagaacattacaaccgagcagggaaagac 449
             |||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 85533 ggataaactggcagagaacattacaaccgaacaggggaagac 85574



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 56    cgatgctccgcgccgtcctcctccgctcag 85
             ||||||||||||||| ||||||||||||||
Sbjct: 84793 cgatgctccgcgccgccctcctccgctcag 84822
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>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0002L09
          Length = 146343

 Score =  244 bits (123), Expect = 2e-61
 Identities = 153/163 (93%)
 Strand = Plus / Plus

                                                                         
Query: 247   gcgacgcaggaggtggtgtcccggatcccgctcaccaccgccgacgagttcagggccgcc 306
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 41852 gcgacgcaggaggtggtgtcgcggatcccgctcaccaccgccgacgagttcagggccgcc 41911

                                                                         
Query: 307   gtggacgctgccaggaccgccttccctggctggcggagcacgccggtcacggcgcggcag 366
             |||||||| ||||||||||||||||| || ||||||| ||||||||| ||  ||||||||
Sbjct: 41912 gtggacgccgccaggaccgccttccccgggtggcggaacacgccggtgaccacgcggcag 41971

                                                        
Query: 367   cgcatcatgttcaaataccaggagctcatccgggccaacatgg 409
             ||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 41972 cgcatcatgctcaagtaccaggagctcatccgggccaacatgg 42014



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                         
Query: 175   agggtgcgcctcctcatcggcggcgacttcgtcgagtccaaggccactgagcacgtcgac 234
             ||||||||||||||||||||||| || |||||||||||   ||||   ||||||||||||
Sbjct: 41691 agggtgcgcctcctcatcggcggggagttcgtcgagtcgcgggccgacgagcacgtcgac 41750

                     
Query: 235   gtcaccaa 242
             ||||||||
Sbjct: 41751 gtcaccaa 41758



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 87    ctccggcctccgccggtcgccgatggccgccccgctatccaccgccgccgcc 138
             |||||||||||||||| | || |||||||| ||||| |||||||||||||||
Sbjct: 41512 ctccggcctccgccggcctcccatggccgcgccgctctccaccgccgccgcc 41563



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 408   ggataagctggcagagaacattacaaccgagcagggaaagac 449
             |||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 42136 ggataaactggcagagaacattacaaccgaacaggggaagac 42177



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 56    cgatgctccgcgccgtcctcctccgctcag 85
             ||||||||||||||| ||||||||||||||
Sbjct: 41396 cgatgctccgcgccgccctcctccgctcag 41425
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                            
Query: 87       ctccggcctccgccggtcgccgatggccgccccgctatccaccgccgccgcctcgtggct 146
                |||||||||||||||  |||||||  |||| | ||| ||||||||||||||||||| |||
Sbjct: 12920988 ctccggcctccgccgaccgccgatatccgcactgctctccaccgccgccgcctcgtagct 12920929

                 
Query: 147      c 147
                |
Sbjct: 12920928 c 12920928
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>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0073A18
          Length = 176755

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                          
Query: 87     ctccggcctccgccggtcgccgatggccgccccgctatccaccgccgccgcctcgtggct 146
              |||||||||||||||  |||||||  |||| | ||| ||||||||||||||||||| |||
Sbjct: 140470 ctccggcctccgccgaccgccgatatccgcactgctctccaccgccgccgcctcgtagct 140411

               
Query: 147    c 147
              |
Sbjct: 140410 c 140410
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>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0688H12
          Length = 139279

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                         
Query: 87    ctccggcctccgccggtcgccgatggccgccccgctatccaccgccgccgcctcgtggct 146
             |||||||||||||||  |||||||  |||| | ||| ||||||||||||||||||| |||
Sbjct: 30631 ctccggcctccgccgaccgccgatatccgcactgctctccaccgccgccgcctcgtagct 30572

              
Query: 147   c 147
             |
Sbjct: 30571 c 30571
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 192     cggcggcgacttcgtcgagtcc 213
               ||||||||||||||||||||||
Sbjct: 4010457 cggcggcgacttcgtcgagtcc 4010436
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>gb|AC007890.6| Drosophila melanogaster clone BACR02G21, complete sequence
          Length = 171563

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 281   ccaccgccgacgagttcagggccgc 305
             |||||||||||||| ||||||||||
Sbjct: 73804 ccaccgccgacgagatcagggccgc 73828
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>gb|AY129447.1| Drosophila melanogaster LD22337 full insert cDNA
          Length = 3007

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 281  ccaccgccgacgagttcagggccgc 305
            |||||||||||||| ||||||||||
Sbjct: 1922 ccaccgccgacgagatcagggccgc 1898
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>ref|NM_169815.2| Drosophila melanogaster CG31122-RA (CG31122), mRNA
          Length = 2923

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 281  ccaccgccgacgagttcagggccgc 305
            |||||||||||||| ||||||||||
Sbjct: 1859 ccaccgccgacgagatcagggccgc 1835
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 61       ctccgcgccgtcctcctccgc 81
                |||||||||||||||||||||
Sbjct: 25097987 ctccgcgccgtcctcctccgc 25097967



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 128     ccgccgccgcctcgtggctcgctg 151
               ||||||||||||||| ||||||||
Sbjct: 8681157 ccgccgccgcctcgtcgctcgctg 8681134



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 125     ccaccgccgccgcctcgtgg 144
               ||||||||||||||||||||
Sbjct: 3798069 ccaccgccgccgcctcgtgg 3798088
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 178     gtgcgcctcctcatcggcggc 198
               |||||||||||||||||||||
Sbjct: 5593558 gtgcgcctcctcatcggcggc 5593578
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>dbj|AP005254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OSJNBb0064I19
          Length = 111644

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 61   ctccgcgccgtcctcctccgc 81
            |||||||||||||||||||||
Sbjct: 2162 ctccgcgccgtcctcctccgc 2142
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>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0025J22
          Length = 175355

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     ctccgcgccgtcctcctccgc 81
              |||||||||||||||||||||
Sbjct: 154103 ctccgcgccgtcctcctccgc 154083
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>gb|AE003722.4| Drosophila melanogaster chromosome 3R, section 60 of 118 of the
             complete sequence
          Length = 221164

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 281   ccaccgccgacgagttcagggccgc 305
             |||||||||||||| ||||||||||
Sbjct: 22302 ccaccgccgacgagatcagggccgc 22326
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>gb|AE010455.1| Methanopyrus kandleri AV19 section 154 of 157 of the complete genome
          Length = 11711

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 282   caccgccgacgagttcagggccgccgtggacg 313
             |||||||||||||||| ||| || ||||||||
Sbjct: 11356 caccgccgacgagttctgggtcgtcgtggacg 11325
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>ref|XM_510018.1| PREDICTED: Pan troglodytes similar to KIAA1200 protein (LOC452983),
            mRNA
          Length = 5055

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 313  gctgccaggaccgccttccctggc 336
            |||||||||||| |||||||||||
Sbjct: 1941 gctgccaggaccaccttccctggc 1918
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>ref|XM_480929.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 501

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 128 ccgccgccgcctcgtggctcgctg 151
           ||||||||||||||| ||||||||
Sbjct: 160 ccgccgccgcctcgtcgctcgctg 137
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>ref|XM_480241.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1914

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 125  ccaccgccgccgcctcgtgg 144
            ||||||||||||||||||||
Sbjct: 1523 ccaccgccgccgcctcgtgg 1542
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>ref|XM_960462.1| Neurospora crassa OR74A hypothetical protein (NCU01924.1) partial
           mRNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 127 accgccgccgcctcgtggct 146
           ||||||||||||||||||||
Sbjct: 900 accgccgccgcctcgtggct 919
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>ref|XM_329113.1| Neurospora crassa OR74A hypothetical protein (NCU01924.1) partial
           mRNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 127 accgccgccgcctcgtggct 146
           ||||||||||||||||||||
Sbjct: 900 accgccgccgcctcgtggct 919
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>ref|NM_020715.1| Homo sapiens pleckstrin homology domain containing, family H (with
            MyTH4 domain) member 1 (PLEKHH1), mRNA
          Length = 6512

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 313  gctgccaggaccgccttccctggc 336
            |||||||||||| |||||||||||
Sbjct: 1042 gctgccaggaccaccttccctggc 1019
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 344     gcacgccggtcacggcgcgg 363
               ||||||||||||||||||||
Sbjct: 2896390 gcacgccggtcacggcgcgg 2896371
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>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 155    gggcctcgtcgtcgccgcccaggg 178
              ||||||||||| ||||||||||||
Sbjct: 344964 gggcctcgtcggcgccgcccaggg 344941
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>gb|AC024585.6| Homo sapiens chromosome 19 clone LLNLF-194E9, complete sequence
          Length = 26400

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   aggagctcatccgggccaac 405
             ||||||||||||||||||||
Sbjct: 13061 aggagctcatccgggccaac 13042
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 345     cacgccggtcacggcgcggc 364
               ||||||||||||||||||||
Sbjct: 3145976 cacgccggtcacggcgcggc 3145995
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 85       gcctccggcctccgccggtcgccg 108
                ||||||||||||||||| ||||||
Sbjct: 12276943 gcctccggcctccgccgctcgccg 12276966
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>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1449_C01
          Length = 192857

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   ccaccgccgccgcctcgtgg 144
             ||||||||||||||||||||
Sbjct: 63286 ccaccgccgccgcctcgtgg 63305
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>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0592B08
          Length = 131096

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 85     gcctccggcctccgccggtcgccg 108
              ||||||||||||||||| ||||||
Sbjct: 113965 gcctccggcctccgccgctcgccg 113988
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>dbj|AP005478.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0070J06
          Length = 142303

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 128   ccgccgccgcctcgtggctcgctg 151
             ||||||||||||||| ||||||||
Sbjct: 24136 ccgccgccgcctcgtcgctcgctg 24113
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>dbj|AK101600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051I20, full
           insert sequence
          Length = 1856

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 85  gcctccggcctccgccggtcgccg 108
           ||||||||||||||||| ||||||
Sbjct: 36  gcctccggcctccgccgctcgccg 59
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>dbj|AK067233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095B21, full
           insert sequence
          Length = 2039

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 85  gcctccggcctccgccggtcgccg 108
           ||||||||||||||||| ||||||
Sbjct: 20  gcctccggcctccgccgctcgccg 43
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>emb|AL132640.4|CNS01DT5 Human chromosome 14 DNA sequence BAC R-643G16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177688

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 313   gctgccaggaccgccttccctggc 336
             |||||||||||| |||||||||||
Sbjct: 80753 gctgccaggaccaccttccctggc 80776
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 274     ccgctcaccaccgccgacgagttc 297
               ||||||||||||||||||| ||||
Sbjct: 1228888 ccgctcaccaccgccgacgtgttc 1228865
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>dbj|AB033026.1| Homo sapiens mRNA for KIAA1200 protein, partial cds
          Length = 6512

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 313  gctgccaggaccgccttccctggc 336
            |||||||||||| |||||||||||
Sbjct: 1042 gctgccaggaccaccttccctggc 1019


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,596,676
Number of Sequences: 3902068
Number of extensions: 3596676
Number of successful extensions: 90583
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88995
Number of HSP's gapped (non-prelim): 1582
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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