>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC|
           1.1.1.-)
          Length = 669

 Score =  153 bits (387), Expect = 2e-37
 Identities = 71/98 (72%), Positives = 82/98 (83%), Gaps = 1/98 (1%)
 Frame = +3

Query: 189 TNGS-SPPALKFLIYGRTGWIGGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDEVAPTH 365
           +NG+   P+LKFLIYG+TGWIGGLLGK+C  QGI + YG GRLE+R+ L  DI  V PTH
Sbjct: 376 SNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTH 435

Query: 366 VFNAAGVTGRPNVDWCETHRVETIRANVCGTLTLADVC 479
           VFN+AGVTGRPNVDWCE+H+ ETIRANV GTLTLADVC
Sbjct: 436 VFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVC 473

>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC|
           1.1.1.-)
          Length = 664

 Score =  152 bits (384), Expect = 4e-37
 Identities = 68/90 (75%), Positives = 78/90 (86%)
 Frame = +3

Query: 210 ALKFLIYGRTGWIGGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDEVAPTHVFNAAGVT 389
           +LKFLIYG+TGW+GGLLGKLC  QGIP+ YG GRLE+RA L ADI  + P+HVFNAAG+T
Sbjct: 379 SLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNAAGLT 438

Query: 390 GRPNVDWCETHRVETIRANVCGTLTLADVC 479
           GRPNVDWCE+H+ ETIR NV GTLTLADVC
Sbjct: 439 GRPNVDWCESHKTETIRVNVAGTLTLADVC 468

>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC|
           1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose
           synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose
           synthase MUM4)
          Length = 667

 Score =  150 bits (380), Expect = 1e-36
 Identities = 71/98 (72%), Positives = 80/98 (81%), Gaps = 2/98 (2%)
 Frame = +3

Query: 192 NGSS--PPALKFLIYGRTGWIGGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDEVAPTH 365
           NG S    +LKFLIYG+TGW+GGLLGKLC  QGI + YG GRLE+RA L ADI  + PTH
Sbjct: 374 NGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTH 433

Query: 366 VFNAAGVTGRPNVDWCETHRVETIRANVCGTLTLADVC 479
           VFNAAG+TGRPNVDWCE+H+ ETIR NV GTLTLADVC
Sbjct: 434 VFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVC 471

>ARLY_HELHP (Q7VFF8) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 472

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +3

Query: 207 PALKFLIYGRTGWI-GGLLGKLCTAQGIPFAYGAGRLENR 323
           P +  L+ G++G + G L+G LC  +G+PFAY     E++
Sbjct: 286 PDVPELLRGKSGRVYGELMGLLCVMKGLPFAYNKDTQEDK 325

>REPS2_MOUSE (Q80XA6) RalBP1-associated Eps domain-containing protein 2|
           (RalBP1-interacting protein 2) (Partner of RalBP1)
          Length = 521

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = +2

Query: 92  IIPAPSRLHLDLATTPPFPLPSRISPFRHGDLHQRLLAAGAQVPHLRPHRLD 247
           ++P P  L       PP P P++  P    DLH +L  A +Q     P ++D
Sbjct: 372 LLPPPPAL-------PPRPCPTQSEPVSEADLHSQLNRAPSQAAESSPTKMD 416

>ARLY_OCEIH (Q8ELT9) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 459

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +3

Query: 207 PALKFLIYGRTGWI-GGLLGKLCTAQGIPFAYGAGRLENR 323
           P +  L+ G+TG + G L+G L T +G+P AY     E++
Sbjct: 285 PDVAELVRGKTGRVYGHLMGMLTTLKGLPLAYNKDMQEDK 324

>ISPE_GLOVI (Q7NPF3) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 302

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 155 SRISPFRHGDLHQRLLAAGAQVPHLRPHRLDRGS 256
           +RI+P  H DL + +L A  QV  LR H +  G+
Sbjct: 212 ARIAPLLHNDLERAVLPAYPQVSALREHLVSAGA 245

>ARLY_LACPL (P59617) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 467

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
 Frame = +3

Query: 207 PALKFLIYGRTGWI-GGLLGKLCTAQGIPFAYGAGRLENRAQLEADIDEVAPT----HVF 371
           P +  LI G++G + G L+G L   +GIP AY     E++   E   D V       HVF
Sbjct: 288 PDMAELIRGKSGRVYGNLMGLLTVMKGIPLAYNKDLQEDK---EGAFDTVTTVLTSLHVF 344

Query: 372 NAAGVTGRPNVD 407
                T   N D
Sbjct: 345 TGMLATLTVNED 356

>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2161

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +2

Query: 62   QRILSSRLPIIIPAPSRLHLDLATTPPFPLPSRISPFR 175
            +R L  RLP   P    L L L T PP P P    P+R
Sbjct: 1441 RRSLLHRLPPTAPGVGPLLLQLGTEPPAPHPGVSKPWR 1478

>CPO_DROME (Q01617) Protein couch potato|
          Length = 738

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
 Frame = +2

Query: 77  SRLPIIIPAPSRLHLDLATTPPFPLPSRISPFRHGD--LHQRLLAAGAQVPHLRPHRLDR 250
           S LP+ +P P  + + L  + P P+  +  P  H     H   ++    + H   H+L  
Sbjct: 120 SVLPVTVPVPVPVSVPLPVSVPVPVSVKGHPISHTHQIAHTHQISHSHPISHPHHHQLSF 179

Query: 251 GSPRQ 265
             P Q
Sbjct: 180 AHPTQ 184

>TREZ_ARTSQ (Q44316) Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141)|
           (MTHase) (4-alpha-D-((1->4)-alpha-D-glucano)trehalose
           trehalohydrolase) (Maltooligosyl trehalose
           trehalohydrolase)
          Length = 598

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 303 AGRLENRAQLEADIDEVAPTHVFNAAGVTGRPNVDWCETH 422
           AG+L+  A L  D  E+ P + FN     G   V W   H
Sbjct: 137 AGKLDYLAGLGVDFIELLPVNAFNGTHNWGYDGVQWFAVH 176


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.296    0.117    0.294 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,783,916
Number of Sequences: 219361
Number of extensions: 712319
Number of successful extensions: 990
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.9 bits)