| Clone Name | bast26c05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507593.1| PREDICTED Oryza sativa (japonica cultivar-group), B1168A08.31 mRNA Length = 1792 Score = 141 bits (71), Expect = 2e-30 Identities = 261/322 (81%), Gaps = 2/322 (0%) Strand = Plus / Plus Query: 147 tcaacaggtacagcttccccgaggggttcatcttcggcaccgcctcctccgccattcagt 206 |||||||| |||||||||||||||||||| |||||||||||| | ||||||| ||||| Sbjct: 110 tcaacaggcacagcttccccgaggggttcctcttcggcaccggcacctccgcgtatcagt 169 Query: 207 atgagggagctgcgaatctgcggggcaagaacatctgggacaccttcactcggagaccag 266 | ||||| |||| | ||| || ||||||||||||||||||||| || | |||| Sbjct: 170 acgagggtgctgtcgacaagcgaggtcagaacatctgggacaccttcagccgcattccag 229 Query: 267 gcaaaatagctgacggcagcaacgtggatacagcaaacgacttctatcatcgctgcaagg 326 | ||||| || || || ||||| | |||| ||| || |||||||||||||| | ||||| Sbjct: 230 gtaaaatcgcagatggtagcaatgcagatatagcgaatgacttctatcatcggtacaagg 289 Query: 327 aggatctgaagctggtaaccgacatgaacatggacgccttccggttctcccttgcatgga 386 ||||| |||| || | |||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 290 aggatttgaacctcatcaccgcgatgaacatggattccttccggttctccattgcatgga 349 Query: 387 gcaggatccttccaaatggaaccatcgccggaggaat-cacanagcaggagtcgatttct 445 ||||||| | |||||||||||||| |||||||| ||| || ||| ||||| |||| Sbjct: 350 gcaggattttaccaaatggaaccattagtggaggaataaacaaagaaggggtcgaattct 409 Query: 446 ac-acagcctcatcgacgaggt 466 || ||||||||||| ||||||| Sbjct: 410 acaacagcctcatcaacgaggt 431
>ref|XM_483283.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1791 Score = 141 bits (71), Expect = 2e-30 Identities = 261/322 (81%), Gaps = 2/322 (0%) Strand = Plus / Plus Query: 147 tcaacaggtacagcttccccgaggggttcatcttcggcaccgcctcctccgccattcagt 206 |||||||| |||||||||||||||||||| |||||||||||| | ||||||| ||||| Sbjct: 105 tcaacaggcacagcttccccgaggggttcctcttcggcaccggcacctccgcgtatcagt 164 Query: 207 atgagggagctgcgaatctgcggggcaagaacatctgggacaccttcactcggagaccag 266 | ||||| |||| | ||| || ||||||||||||||||||||| || | |||| Sbjct: 165 acgagggtgctgtcgacaagcgaggtcagaacatctgggacaccttcagccgcattccag 224 Query: 267 gcaaaatagctgacggcagcaacgtggatacagcaaacgacttctatcatcgctgcaagg 326 | ||||| || || || ||||| | |||| ||| || |||||||||||||| | ||||| Sbjct: 225 gtaaaatcgcagatggtagcaatgcagatatagcgaatgacttctatcatcggtacaagg 284 Query: 327 aggatctgaagctggtaaccgacatgaacatggacgccttccggttctcccttgcatgga 386 ||||| |||| || | |||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 285 aggatttgaacctcatcaccgcgatgaacatggattccttccggttctccattgcatgga 344 Query: 387 gcaggatccttccaaatggaaccatcgccggaggaat-cacanagcaggagtcgatttct 445 ||||||| | |||||||||||||| |||||||| ||| || ||| ||||| |||| Sbjct: 345 gcaggattttaccaaatggaaccattagtggaggaataaacaaagaaggggtcgaattct 404 Query: 446 ac-acagcctcatcgacgaggt 466 || ||||||||||| ||||||| Sbjct: 405 acaacagcctcatcaacgaggt 426
>ref|XM_507289.2| PREDICTED Oryza sativa (japonica cultivar-group), B1168A08.31 mRNA Length = 1803 Score = 141 bits (71), Expect = 2e-30 Identities = 261/322 (81%), Gaps = 2/322 (0%) Strand = Plus / Plus Query: 147 tcaacaggtacagcttccccgaggggttcatcttcggcaccgcctcctccgccattcagt 206 |||||||| |||||||||||||||||||| |||||||||||| | ||||||| ||||| Sbjct: 110 tcaacaggcacagcttccccgaggggttcctcttcggcaccggcacctccgcgtatcagt 169 Query: 207 atgagggagctgcgaatctgcggggcaagaacatctgggacaccttcactcggagaccag 266 | ||||| |||| | ||| || ||||||||||||||||||||| || | |||| Sbjct: 170 acgagggtgctgtcgacaagcgaggtcagaacatctgggacaccttcagccgcattccag 229 Query: 267 gcaaaatagctgacggcagcaacgtggatacagcaaacgacttctatcatcgctgcaagg 326 | ||||| || || || ||||| | |||| ||| || |||||||||||||| | ||||| Sbjct: 230 gtaaaatcgcagatggtagcaatgcagatatagcgaatgacttctatcatcggtacaagg 289 Query: 327 aggatctgaagctggtaaccgacatgaacatggacgccttccggttctcccttgcatgga 386 ||||| |||| || | |||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 290 aggatttgaacctcatcaccgcgatgaacatggattccttccggttctccattgcatgga 349 Query: 387 gcaggatccttccaaatggaaccatcgccggaggaat-cacanagcaggagtcgatttct 445 ||||||| | |||||||||||||| |||||||| ||| || ||| ||||| |||| Sbjct: 350 gcaggattttaccaaatggaaccattagtggaggaataaacaaagaaggggtcgaattct 409 Query: 446 ac-acagcctcatcgacgaggt 466 || ||||||||||| ||||||| Sbjct: 410 acaacagcctcatcaacgaggt 431
>dbj|AK105908.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-G05, full insert sequence Length = 1792 Score = 141 bits (71), Expect = 2e-30 Identities = 261/322 (81%), Gaps = 2/322 (0%) Strand = Plus / Plus Query: 147 tcaacaggtacagcttccccgaggggttcatcttcggcaccgcctcctccgccattcagt 206 |||||||| |||||||||||||||||||| |||||||||||| | ||||||| ||||| Sbjct: 110 tcaacaggcacagcttccccgaggggttcctcttcggcaccggcacctccgcgtatcagt 169 Query: 207 atgagggagctgcgaatctgcggggcaagaacatctgggacaccttcactcggagaccag 266 | ||||| |||| | ||| || ||||||||||||||||||||| || | |||| Sbjct: 170 acgagggtgctgtcgacaagcgaggtcagaacatctgggacaccttcagccgcattccag 229 Query: 267 gcaaaatagctgacggcagcaacgtggatacagcaaacgacttctatcatcgctgcaagg 326 | ||||| || || || ||||| | |||| ||| || |||||||||||||| | ||||| Sbjct: 230 gtaaaatcgcagatggtagcaatgcagatatagcgaatgacttctatcatcggtacaagg 289 Query: 327 aggatctgaagctggtaaccgacatgaacatggacgccttccggttctcccttgcatgga 386 ||||| |||| || | |||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 290 aggatttgaacctcatcaccgcgatgaacatggattccttccggttctccattgcatgga 349 Query: 387 gcaggatccttccaaatggaaccatcgccggaggaat-cacanagcaggagtcgatttct 445 ||||||| | |||||||||||||| |||||||| ||| || ||| ||||| |||| Sbjct: 350 gcaggattttaccaaatggaaccattagtggaggaataaacaaagaaggggtcgaattct 409 Query: 446 ac-acagcctcatcgacgaggt 466 || ||||||||||| ||||||| Sbjct: 410 acaacagcctcatcaacgaggt 431
>dbj|AK098938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038D01, full insert sequence Length = 1792 Score = 133 bits (67), Expect = 6e-28 Identities = 260/322 (80%), Gaps = 2/322 (0%) Strand = Plus / Plus Query: 147 tcaacaggtacagcttccccgaggggttcatcttcggcaccgcctcctccgccattcagt 206 |||||||| |||||||||||||||||||| |||||||||||| | ||||||| ||||| Sbjct: 106 tcaacaggcacagcttccccgaggggttcctcttcggcaccggcacctccgcgtatcagt 165 Query: 207 atgagggagctgcgaatctgcggggcaagaacatctgggacaccttcactcggagaccag 266 | ||||| |||| | ||| || ||||||||||||||||||||| || | |||| Sbjct: 166 acgagggtgctgtcgacaagcgaggtcagaacatctgggacaccttcagccgcattccag 225 Query: 267 gcaaaatagctgacggcagcaacgtggatacagcaaacgacttctatcatcgctgcaagg 326 | ||||| || || || ||||| | |||| ||| || |||||||||||||| | ||||| Sbjct: 226 gtaaaatcgcagatggtagcaatgcagatatagcgaatgacttctatcatcggtacaagg 285 Query: 327 aggatctgaagctggtaaccgacatgaacatggacgccttccggttctcccttgcatgga 386 ||||| |||| || | |||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 286 aggatttgaacctcatcaccgcgatgaacatggattccttccggttctccattgcatgga 345 Query: 387 gcaggatccttccaaatggaaccatcgccggaggaat-cacanagcaggagtcgatttct 445 || |||| | |||||||||||||| |||||||| ||| || ||| ||||| |||| Sbjct: 346 gcgggattttaccaaatggaaccattagtggaggaataaacaaagaaggggtcgaattct 405 Query: 446 ac-acagcctcatcgacgaggt 466 || ||||||||||| ||||||| Sbjct: 406 acaacagcctcatcaacgaggt 427
>dbj|AK059210.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B10, full insert sequence Length = 1803 Score = 133 bits (67), Expect = 6e-28 Identities = 260/322 (80%), Gaps = 2/322 (0%) Strand = Plus / Plus Query: 147 tcaacaggtacagcttccccgaggggttcatcttcggcaccgcctcctccgccattcagt 206 |||||||| |||||||||||||||||||| |||| ||||||| | ||||||| ||||| Sbjct: 110 tcaacaggcacagcttccccgaggggttcctctttggcaccggcacctccgcgcatcagt 169 Query: 207 atgagggagctgcgaatctgcggggcaagaacatctgggacaccttcactcggagaccag 266 | ||||| |||| | ||| || ||||||||||||||||||||| || | |||| Sbjct: 170 acgagggtgctgtcgacaagcgaggtcagaacatctgggacaccttcagccgcattccag 229 Query: 267 gcaaaatagctgacggcagcaacgtggatacagcaaacgacttctatcatcgctgcaagg 326 | ||||| || || || ||||| | |||| ||| || |||||||||||||| | ||||| Sbjct: 230 gtaaaatcgcagatggtagcaatgcagatatagcgaatgacttctatcatcggtacaagg 289 Query: 327 aggatctgaagctggtaaccgacatgaacatggacgccttccggttctcccttgcatgga 386 ||||| |||| || | |||| ||||||||||| |||||||||||||| ||||||||| Sbjct: 290 aggatttgaacctcatcaccgcgatgaacatggattccttccggttctccattgcatgga 349 Query: 387 gcaggatccttccaaatggaaccatcgccggaggaat-cacanagcaggagtcgatttct 445 ||||||| | |||||||||||||| |||||||| ||| || ||| ||||| |||| Sbjct: 350 gcaggattttaccaaatggaaccattagtggaggaataaacaaagaaggggtcgaattct 409 Query: 446 ac-acagcctcatcgacgaggt 466 || ||||||||||| ||||||| Sbjct: 410 acaacagcctcatcaacgaggt 431
>ref|XM_507288.1| PREDICTED Oryza sativa (japonica cultivar-group), B1168A08.29-2 mRNA Length = 2148 Score = 129 bits (65), Expect = 9e-27 Identities = 107/121 (88%) Strand = Plus / Plus Query: 305 gacttctatcatcgctgcaaggaggatctgaagctggtaaccgacatgaacatggacgcc 364 ||||| || ||||||| ||||||||||||||| | || ||||||||||||||||||||| Sbjct: 352 gacttttaccatcgctacaaggaggatctgaacttcgtgaccgacatgaacatggacgcc 411 Query: 365 ttccggttctcccttgcatggagcaggatccttccaaatggaaccatcgccggaggaatc 424 ||||| |||||| |||| |||||||||||||| ||||||||||||||| ||||||||| Sbjct: 412 ttccgtttctccattgcttggagcaggatcctgccaaatggaaccatcagtggaggaatc 471 Query: 425 a 425 | Sbjct: 472 a 472 Score = 60.0 bits (30), Expect = 7e-06 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 130 cgtccatggcgccgggttcaacaggtacagcttccccgaggggttcatcttcggcaccgc 189 ||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 174 cgtccatggcgcc---ttcaacaggttcagcttcccggaggacttcatcttcggcaccgg 230 Query: 190 ctcc 193 |||| Sbjct: 231 ctcc 234
>ref|XM_483282.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2148 Score = 129 bits (65), Expect = 9e-27 Identities = 107/121 (88%) Strand = Plus / Plus Query: 305 gacttctatcatcgctgcaaggaggatctgaagctggtaaccgacatgaacatggacgcc 364 ||||| || ||||||| ||||||||||||||| | || ||||||||||||||||||||| Sbjct: 352 gacttttaccatcgctacaaggaggatctgaacttcgtgaccgacatgaacatggacgcc 411 Query: 365 ttccggttctcccttgcatggagcaggatccttccaaatggaaccatcgccggaggaatc 424 ||||| |||||| |||| |||||||||||||| ||||||||||||||| ||||||||| Sbjct: 412 ttccgtttctccattgcttggagcaggatcctgccaaatggaaccatcagtggaggaatc 471 Query: 425 a 425 | Sbjct: 472 a 472 Score = 60.0 bits (30), Expect = 7e-06 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 130 cgtccatggcgccgggttcaacaggtacagcttccccgaggggttcatcttcggcaccgc 189 ||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 174 cgtccatggcgcc---ttcaacaggttcagcttcccggaggacttcatcttcggcaccgg 230 Query: 190 ctcc 193 |||| Sbjct: 231 ctcc 234
>ref|XM_483281.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2045 Score = 129 bits (65), Expect = 9e-27 Identities = 107/121 (88%) Strand = Plus / Plus Query: 305 gacttctatcatcgctgcaaggaggatctgaagctggtaaccgacatgaacatggacgcc 364 ||||| || ||||||| ||||||||||||||| | || ||||||||||||||||||||| Sbjct: 405 gacttttaccatcgctacaaggaggatctgaacttcgtgaccgacatgaacatggacgcc 464 Query: 365 ttccggttctcccttgcatggagcaggatccttccaaatggaaccatcgccggaggaatc 424 ||||| |||||| |||| |||||||||||||| ||||||||||||||| ||||||||| Sbjct: 465 ttccgtttctccattgcttggagcaggatcctgccaaatggaaccatcagtggaggaatc 524 Query: 425 a 425 | Sbjct: 525 a 525 Score = 60.0 bits (30), Expect = 7e-06 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 130 cgtccatggcgccgggttcaacaggtacagcttccccgaggggttcatcttcggcaccgc 189 ||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 227 cgtccatggcgcc---ttcaacaggttcagcttcccggaggacttcatcttcggcaccgg 283 Query: 190 ctcc 193 |||| Sbjct: 284 ctcc 287
>dbj|AK120430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095M12, full insert sequence Length = 2148 Score = 129 bits (65), Expect = 9e-27 Identities = 107/121 (88%) Strand = Plus / Plus Query: 305 gacttctatcatcgctgcaaggaggatctgaagctggtaaccgacatgaacatggacgcc 364 ||||| || ||||||| ||||||||||||||| | || ||||||||||||||||||||| Sbjct: 352 gacttttaccatcgctacaaggaggatctgaacttcgtgaccgacatgaacatggacgcc 411 Query: 365 ttccggttctcccttgcatggagcaggatccttccaaatggaaccatcgccggaggaatc 424 ||||| |||||| |||| |||||||||||||| ||||||||||||||| ||||||||| Sbjct: 412 ttccgtttctccattgcttggagcaggatcctgccaaatggaaccatcagtggaggaatc 471 Query: 425 a 425 | Sbjct: 472 a 472 Score = 60.0 bits (30), Expect = 7e-06 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 130 cgtccatggcgccgggttcaacaggtacagcttccccgaggggttcatcttcggcaccgc 189 ||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 174 cgtccatggcgcc---ttcaacaggttcagcttcccggaggacttcatcttcggcaccgg 230 Query: 190 ctcc 193 |||| Sbjct: 231 ctcc 234
>dbj|AK067231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095O12, full insert sequence Length = 2148 Score = 129 bits (65), Expect = 9e-27 Identities = 107/121 (88%) Strand = Plus / Plus Query: 305 gacttctatcatcgctgcaaggaggatctgaagctggtaaccgacatgaacatggacgcc 364 ||||| || ||||||| ||||||||||||||| | || ||||||||||||||||||||| Sbjct: 352 gacttttaccatcgctacaaggaggatctgaacttcgtgaccgacatgaacatggacgcc 411 Query: 365 ttccggttctcccttgcatggagcaggatccttccaaatggaaccatcgccggaggaatc 424 ||||| |||||| |||| |||||||||||||| ||||||||||||||| ||||||||| Sbjct: 412 ttccgtttctccattgcttggagcaggatcctgccaaatggaaccatcagtggaggaatc 471 Query: 425 a 425 | Sbjct: 472 a 472 Score = 60.0 bits (30), Expect = 7e-06 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 130 cgtccatggcgccgggttcaacaggtacagcttccccgaggggttcatcttcggcaccgc 189 ||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 174 cgtccatggcgcc---ttcaacaggttcagcttcccggaggacttcatcttcggcaccgg 230 Query: 190 ctcc 193 |||| Sbjct: 231 ctcc 234
>dbj|AK067001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092F09, full insert sequence Length = 2045 Score = 129 bits (65), Expect = 9e-27 Identities = 107/121 (88%) Strand = Plus / Plus Query: 305 gacttctatcatcgctgcaaggaggatctgaagctggtaaccgacatgaacatggacgcc 364 ||||| || ||||||| ||||||||||||||| | || ||||||||||||||||||||| Sbjct: 405 gacttttaccatcgctacaaggaggatctgaacttcgtgaccgacatgaacatggacgcc 464 Query: 365 ttccggttctcccttgcatggagcaggatccttccaaatggaaccatcgccggaggaatc 424 ||||| |||||| |||| |||||||||||||| ||||||||||||||| ||||||||| Sbjct: 465 ttccgtttctccattgcttggagcaggatcctgccaaatggaaccatcagtggaggaatc 524 Query: 425 a 425 | Sbjct: 525 a 525 Score = 60.0 bits (30), Expect = 7e-06 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Plus Query: 130 cgtccatggcgccgggttcaacaggtacagcttccccgaggggttcatcttcggcaccgc 189 ||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 227 cgtccatggcgcc---ttcaacaggttcagcttcccggaggacttcatcttcggcaccgg 283 Query: 190 ctcc 193 |||| Sbjct: 284 ctcc 287
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 324 aggaggatctgaagctggtaaccgacatgaacatggacgccttccggttctcccttgcat 383 ||||||||||||| | || |||||||||||||||||||||||||| |||||| |||| | Sbjct: 25246618 aggaggatctgaacttcgtgaccgacatgaacatggacgccttccgtttctccattgctt 25246559 Query: 384 ggagcaggatccttccaa 401 ||||||||||||| |||| Sbjct: 25246558 ggagcaggatcctgccaa 25246541 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 147 tcaacaggtacagcttccccgaggggttcatcttcggcaccgcctcctccgc 198 |||||||| |||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 25259584 tcaacaggcacagcttccccgaggggttcctcttcggcaccggcacctccgc 25259533 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 350 atgaacatggacgccttccggttctcccttgcatggagcaggat 393 ||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 25259001 atgaacatggattccttccggttctccattgcatggagcaggat 25258958 Score = 60.0 bits (30), Expect = 7e-06 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 130 cgtccatggcgccgggttcaacaggtacagcttccccgaggggttcatcttcggcaccgc 189 ||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 25247189 cgtccatggcgcc---ttcaacaggttcagcttcccggaggacttcatcttcggcaccgg 25247133 Query: 190 ctcc 193 |||| Sbjct: 25247132 ctcc 25247129 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 agaacatctgggacaccttca 254 ||||||||||||||||||||| Sbjct: 25259373 agaacatctgggacaccttca 25259353
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1168A08 Length = 138135 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 324 aggaggatctgaagctggtaaccgacatgaacatggacgccttccggttctcccttgcat 383 ||||||||||||| | || |||||||||||||||||||||||||| |||||| |||| | Sbjct: 111741 aggaggatctgaacttcgtgaccgacatgaacatggacgccttccgtttctccattgctt 111682 Query: 384 ggagcaggatccttccaa 401 ||||||||||||| |||| Sbjct: 111681 ggagcaggatcctgccaa 111664 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 147 tcaacaggtacagcttccccgaggggttcatcttcggcaccgcctcctccgc 198 |||||||| |||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 124707 tcaacaggcacagcttccccgaggggttcctcttcggcaccggcacctccgc 124656 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 350 atgaacatggacgccttccggttctcccttgcatggagcaggat 393 ||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 124124 atgaacatggattccttccggttctccattgcatggagcaggat 124081 Score = 60.0 bits (30), Expect = 7e-06 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 130 cgtccatggcgccgggttcaacaggtacagcttccccgaggggttcatcttcggcaccgc 189 ||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 112312 cgtccatggcgcc---ttcaacaggttcagcttcccggaggacttcatcttcggcaccgg 112256 Query: 190 ctcc 193 |||| Sbjct: 112255 ctcc 112252 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 agaacatctgggacaccttca 254 ||||||||||||||||||||| Sbjct: 124496 agaacatctgggacaccttca 124476
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016N23 Length = 147336 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 324 aggaggatctgaagctggtaaccgacatgaacatggacgccttccggttctcccttgcat 383 ||||||||||||| | || |||||||||||||||||||||||||| |||||| |||| | Sbjct: 21803 aggaggatctgaacttcgtgaccgacatgaacatggacgccttccgtttctccattgctt 21744 Query: 384 ggagcaggatccttccaa 401 ||||||||||||| |||| Sbjct: 21743 ggagcaggatcctgccaa 21726 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 147 tcaacaggtacagcttccccgaggggttcatcttcggcaccgcctcctccgc 198 |||||||| |||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 34769 tcaacaggcacagcttccccgaggggttcctcttcggcaccggcacctccgc 34718 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 350 atgaacatggacgccttccggttctcccttgcatggagcaggat 393 ||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 34186 atgaacatggattccttccggttctccattgcatggagcaggat 34143 Score = 60.0 bits (30), Expect = 7e-06 Identities = 56/64 (87%), Gaps = 3/64 (4%) Strand = Plus / Minus Query: 130 cgtccatggcgccgggttcaacaggtacagcttccccgaggggttcatcttcggcaccgc 189 ||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 22374 cgtccatggcgcc---ttcaacaggttcagcttcccggaggacttcatcttcggcaccgg 22318 Query: 190 ctcc 193 |||| Sbjct: 22317 ctcc 22314 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 agaacatctgggacaccttca 254 ||||||||||||||||||||| Sbjct: 34558 agaacatctgggacaccttca 34538
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 347 gacatgaacatggacgccttccggttctcccttgcatggagcaggatccttccaa 401 |||||||||||||||||||||||||||||| |||| |||| ||||||||| |||| Sbjct: 25688 gacatgaacatggacgccttccggttctccattgcgtggaccaggatcctgccaa 25742
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 347 gacatgaacatggacgccttccggttctcccttgcatggagcaggatccttccaa 401 |||||||||||||||||||||||||||||| |||| |||| ||||||||| |||| Sbjct: 4244178 gacatgaacatggacgccttccggttctccattgcgtggaccaggatcctgccaa 4244232
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 347 gacatgaacatggacgccttccggttctcccttgcatggagcaggatccttccaa 401 |||||||||||||||||||||||||||||| |||| |||| ||||||||| |||| Sbjct: 4252872 gacatgaacatggacgccttccggttctccattgcgtggaccaggatcctgccaa 4252926
>gb|AY056828.1| Oryza sativa beta-glucosidase isozyme 2 precursor, mRNA, complete cds Length = 1797 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 347 gacatgaacatggacgccttccggttctcccttgcatggagcaggatccttccaaatgga 406 |||||||||||||| || |||||||||||| |||| |||| ||||||||| ||||||||| Sbjct: 298 gacatgaacatggatgctttccggttctccattgcgtggaccaggatcctgccaaatgga 357 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 153 ggtacagcttccccgaggggttcatcttcggcac 186 |||||||||||||| ||| |||||||||||||| Sbjct: 98 ggtacagcttccccaaggacttcatcttcggcac 131
>dbj|AK104707.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-D11, full insert sequence Length = 1665 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 347 gacatgaacatggacgccttccggttctcccttgcatggagcaggatccttccaaatgga 406 |||||||||||||| || |||||||||||| |||| |||| ||||||||| ||||||||| Sbjct: 179 gacatgaacatggatgctttccggttctccattgcgtggaccaggatcctgccaaatgga 238
>dbj|AK066710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074A20, full insert sequence Length = 1811 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 347 gacatgaacatggacgccttccggttctcccttgcatggagcaggatccttccaaatgga 406 |||||||||||||| || |||||||||||| |||| |||| ||||||||| ||||||||| Sbjct: 326 gacatgaacatggatgctttccggttctccattgcgtggaccaggatcctgccaaatgga 385 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 153 ggtacagcttccccgaggggttcatcttcggcac 186 |||||||||||||| ||| |||||||||||||| Sbjct: 126 ggtacagcttccccaaggacttcatcttcggcac 159
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 157 cagcttccccgaggggttcatcttcggcaccgcctcctccgc 198 ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 5851301 cagcttccccgaggggttcgtcttcggcaccgcctccgccgc 5851260 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cggcggcgtccatggcgccg 143 |||||||||||||||||||| Sbjct: 4611353 cggcggcgtccatggcgccg 4611334
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0021B21, from chromosome 3, complete sequence Length = 139208 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 157 cagcttccccgaggggttcatcttcggcaccgcctcctccgc 198 ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 80131 cagcttccccgaggggttcgtcttcggcaccgcctccgccgc 80090
>gb|AY129294.1| Oryza sativa (japonica cultivar-group) beta-glucosidase mRNA, complete cds Length = 2032 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 157 cagcttccccgaggggttcatcttcggcaccgcctcctccgc 198 ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 285 cagcttccccgaggggttcgtcttcggcaccgcctccgccgc 326
>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0085F02, complete sequence Length = 128535 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 157 cagcttccccgaggggttcatcttcggcaccgcctcctccgc 198 ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 923 cagcttccccgaggggttcgtcttcggcaccgcctccgccgc 882
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 157 cagcttccccgaggggttcatcttcggcaccgcctcctccgc 198 ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 5850514 cagcttccccgaggggttcgtcttcggcaccgcctccgccgc 5850473 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cggcggcgtccatggcgccg 143 |||||||||||||||||||| Sbjct: 4611468 cggcggcgtccatggcgccg 4611449
>dbj|AK119546.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A05, full insert sequence Length = 1828 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 157 cagcttccccgaggggttcatcttcggcaccgcctcctccgc 198 ||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 203 cagcttccccgaggggttcgtcttcggcaccgcctccgccgc 244
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 145 gttcaacaggtacagcttccccgaggggttcatcttcggcaccg 188 |||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 146798 gttcaacaggtacagcttccccaaggatttcatcttcggcaccg 146841 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 347 gacatgaacatggacgccttccggttctcccttgcatggagcaggatccttccaa 401 |||||||||||||||||||||||||| ||| || | |||||| ||||||| |||| Sbjct: 147758 gacatgaacatggacgccttccggttttccatttcttggagccggatcctgccaa 147812 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 347 gacatgaacatggacgccttccggttctcccttgcatggagcaggatccttccaa 401 |||||||||||||| || |||||||||||| |||| |||| ||||||||| |||| Sbjct: 132706 gacatgaacatggatgctttccggttctccattgcgtggaccaggatcctgccaa 132760 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 153 ggtacagcttccccgaggggttcatcttcggcac 186 |||||||||||||| ||| |||||||||||||| Sbjct: 132181 ggtacagcttccccaaggacttcatcttcggcac 132214
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 145 gttcaacaggtacagcttccccgaggggttcatcttcggcaccg 188 |||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 122553 gttcaacaggtacagcttccccaaggatttcatcttcggcaccg 122510 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 347 gacatgaacatggacgccttccggttctcccttgcatggagcaggatccttccaa 401 |||||||||||||| || |||||||||||| |||| |||| ||||||||| |||| Sbjct: 136647 gacatgaacatggatgctttccggttctccattgcgtggaccaggatcctgccaa 136593 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 347 gacatgaacatggacgccttccggttctcccttgcatggagcaggatccttccaa 401 |||||||||||||||||||||||||| ||| || | |||||| ||||||| |||| Sbjct: 121593 gacatgaacatggacgccttccggttttccatttcttggagccggatcctgccaa 121539 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Minus Query: 153 ggtacagcttccccgaggggttcatcttcggcac 186 |||||||||||||| ||| |||||||||||||| Sbjct: 137172 ggtacagcttccccaaggacttcatcttcggcac 137139
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 145 gttcaacaggtacagcttccccgaggggttcatcttcggcaccg 188 |||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 18724130 gttcaacaggtacagcttccccaaggatttcatcttcggcaccg 18724087 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 347 gacatgaacatggacgccttccggttctcccttgcatggagcaggatccttccaa 401 |||||||||||||| || |||||||||||| |||| |||| ||||||||| |||| Sbjct: 18738795 gacatgaacatggatgctttccggttctccattgcgtggaccaggatcctgccaa 18738741 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 347 gacatgaacatggacgccttccggttctcccttgcatggagcaggatccttccaa 401 |||||||||||||||||||||||||| ||| || | |||||| ||||||| |||| Sbjct: 18723170 gacatgaacatggacgccttccggttttccatttcttggagccggatcctgccaa 18723116 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Minus Query: 153 ggtacagcttccccgaggggttcatcttcggcac 186 |||||||||||||| ||| |||||||||||||| Sbjct: 18739320 ggtacagcttccccaaggacttcatcttcggcac 18739287
>ref|XM_472855.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1521 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 158 agcttccccgaggggttcatcttcggcaccgcctc 192 |||||||||||||||||||||||||| || ||||| Sbjct: 100 agcttccccgaggggttcatcttcgggacggcctc 134
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence Length = 160155 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 158 agcttccccgaggggttcatcttcggcaccgcctc 192 |||||||||||||||||||||||||| || ||||| Sbjct: 63524 agcttccccgaggggttcatcttcgggacggcctc 63490 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 158 agcttccccgaggggttcatcttcggcaccgcctc 192 ||||||||| |||||||||||||||| || ||||| Sbjct: 48867 agcttccccaaggggttcatcttcgggacagcctc 48833 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 158 agcttccccgaggggttcatcttcgg 183 ||||||||| |||||||||||||||| Sbjct: 17814 agcttccccaaggggttcatcttcgg 17789
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 158 agcttccccgaggggttcatcttcggcaccgcctc 192 |||||||||||||||||||||||||| || ||||| Sbjct: 23742612 agcttccccgaggggttcatcttcgggacggcctc 23742578 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 158 agcttccccgaggggttcatcttcggcaccgcctc 192 ||||||||| |||||||||||||||| || ||||| Sbjct: 23727955 agcttccccaaggggttcatcttcgggacagcctc 23727921 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 158 agcttccccgaggggttcatcttcgg 183 ||||||||| |||||||||||||||| Sbjct: 23696902 agcttccccaaggggttcatcttcgg 23696877
>dbj|AK070962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066D17, full insert sequence Length = 1853 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 158 agcttccccgaggggttcatcttcggcaccgcctc 192 |||||||||||||||||||||||||| || ||||| Sbjct: 124 agcttccccgaggggttcatcttcgggacggcctc 158
>ref|XM_472853.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1533 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 158 agcttccccgaggggttcatcttcggcaccgcctc 192 ||||||||| |||||||||||||||| || ||||| Sbjct: 112 agcttccccaaggggttcatcttcgggacagcctc 146
>dbj|AK105375.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-D10, full insert sequence Length = 1034 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 158 agcttccccgaggggttcatcttcggcaccgcctc 192 ||||||||| |||||||||||||||| || ||||| Sbjct: 144 agcttccccaaggggttcatcttcgggacagcctc 178
>dbj|AK066908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092D04, full insert sequence Length = 3403 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 158 agcttccccgaggggttcatcttcgg 183 ||||||||| |||||||||||||||| Sbjct: 162 agcttccccaaggggttcatcttcgg 187
>emb|AL513533.15| Human DNA sequence from clone RP11-341B24 on chromosome 10 Contains the 3' end of the LIPA gene for lipase A lysosomal acid cholesterol esterase (Wolman disease), a novel zinc finger pseudogene and the CH25 gene for cholesterol 25-hydroxylase, complete sequence Length = 148151 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 gcaagaacatctgggacacct 251 ||||||||||||||||||||| Sbjct: 129985 gcaagaacatctgggacacct 130005
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 caggtacagcttccccgaggggttc 175 |||||||||| |||||||||||||| Sbjct: 12089852 caggtacagcgtccccgaggggttc 12089828
>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0026D20 Length = 130634 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 caggtacagcttccccgaggggttc 175 |||||||||| |||||||||||||| Sbjct: 38157 caggtacagcgtccccgaggggttc 38133
>emb|AL645805.5| Mouse DNA sequence from clone RP23-175A18 on chromosome 11, complete sequence Length = 134372 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 ggctcttctcctccccgctct 90 ||||||||||||||||||||| Sbjct: 120112 ggctcttctcctccccgctct 120092
>ref|NM_121237.1| Arabidopsis thaliana nutrient reservoir AT5G11990 mRNA, complete cds Length = 546 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tcttcggcaccgcctcctccgcca 200 |||||| ||||||||||||||||| Sbjct: 193 tcttcgccaccgcctcctccgcca 216
>ref|NM_187670.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 990 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cggcggcgtccatggcgccg 143 |||||||||||||||||||| Sbjct: 547 cggcggcgtccatggcgccg 528
>ref|XM_417105.1| PREDICTED: Gallus gallus similar to Klotho (LOC418909), mRNA Length = 1120 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 catctgggacaccttcactc 257 |||||||||||||||||||| Sbjct: 271 catctgggacaccttcactc 290
>gb|AC106595.9| Rattus norvegicus 7 BAC CH230-237N20 (Children's Hospital Oakland Research Institute) complete sequence Length = 214961 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cactccagctctgggaaact 39 |||||||||||||||||||| Sbjct: 48088 cactccagctctgggaaact 48107
>gb|AC122185.4| Mus musculus BAC clone RP23-18J13 from chromosome 15, complete sequence Length = 202485 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cactccagctctgggaaact 39 |||||||||||||||||||| Sbjct: 7428 cactccagctctgggaaact 7447
>gb|AC123931.3| Mus musculus BAC clone RP23-307O16 from 15, complete sequence Length = 181350 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cactccagctctgggaaact 39 |||||||||||||||||||| Sbjct: 148679 cactccagctctgggaaact 148698
>gb|AC098726.2| Mus musculus BAC clone RP23-3E20 from 17, complete sequence Length = 195690 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ctctgggaaactagtgacct 47 |||||||||||||||||||| Sbjct: 43327 ctctgggaaactagtgacct 43346
>gb|AC101821.14| Mus musculus chromosome 17, clone RP24-392L10, complete sequence Length = 132393 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 ctctgggaaactagtgacct 47 |||||||||||||||||||| Sbjct: 40791 ctctgggaaactagtgacct 40810
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gcggcggcgtccatggcgcc 142 |||||||||||||||||||| Sbjct: 4287011 gcggcggcgtccatggcgcc 4287030
>emb|AL365330.16| Human DNA sequence from clone RP1-286D6 on chromosome 1 Contains the 3' end of the gene for a novel protein (FLJ32825), a novel gene, the gene for a novel protein (KIAA1185), the 3' end of the gene for glycine- glutamate-thienylcyclohexylpiperidine-binding protein (KIAA0562) and four CpG islands, complete sequence Length = 62238 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 agctgacggcagcaacgtgg 293 |||||||||||||||||||| Sbjct: 20968 agctgacggcagcaacgtgg 20987
>gb|AY194953.1| Ophiostoma ips strain MCC 036 beta-tubulin gene, partial cds Length = 772 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 cggcgtccatggcgccgggttcaa 150 |||||||||||| ||||||||||| Sbjct: 386 cggcgtccatggtgccgggttcaa 363
>gb|AC165271.2| Mus musculus BAC clone RP24-424G16 from chromosome 16, complete sequence Length = 165496 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gggctcttctcctccccgctctag 92 |||||||||||||||| ||||||| Sbjct: 26576 gggctcttctcctcccagctctag 26599
>emb|AL163812.1|ATF14F18 Arabidopsis thaliana DNA chromosome 5, BAC clone F14F18 (ESSA project) Length = 103638 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 tcttcggcaccgcctcctccgcca 200 |||||| ||||||||||||||||| Sbjct: 67545 tcttcgccaccgcctcctccgcca 67522
>gb|AC094082.3| Homo sapiens chromosome 5 clone CTD-2005E22, complete sequence Length = 105011 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ggggcaagaacatctgggac 247 |||||||||||||||||||| Sbjct: 37281 ggggcaagaacatctgggac 37300
>gb|AF188026.4| Homo sapiens chromosome 8 clone CTD-2373L20 map 8q24.3, complete sequence Length = 101456 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 catcgctgcaaggaggatct 333 |||||||||||||||||||| Sbjct: 8583 catcgctgcaaggaggatct 8602
>gb|AC112708.3| Homo sapiens chromosome 19 clone LLNL-FOS_33C4, complete sequence Length = 22624 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tggaatggagaggggggctc 74 |||||||||||||||||||| Sbjct: 211 tggaatggagaggggggctc 230
>gb|AC090776.3| Homo sapiens chromosome 8, clone CTD-2373L20, complete sequence Length = 101459 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 catcgctgcaaggaggatct 333 |||||||||||||||||||| Sbjct: 92876 catcgctgcaaggaggatct 92857
>gb|AC100822.2| Homo sapiens chromosome 8, clone RP11-654O1, complete sequence Length = 186380 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 catcgctgcaaggaggatct 333 |||||||||||||||||||| Sbjct: 154830 catcgctgcaaggaggatct 154849
>gb|AC008830.7| Homo sapiens chromosome 5 clone CTD-2142G21, complete sequence Length = 140696 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ggggcaagaacatctgggac 247 |||||||||||||||||||| Sbjct: 28822 ggggcaagaacatctgggac 28803
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ttcatcttcggcaccgcctc 192 |||||||||||||||||||| Sbjct: 4221181 ttcatcttcggcaccgcctc 4221162
>emb|BX929798.2| Gallus gallus finished cDNA, clone ChEST552k22 Length = 686 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 catctgggacaccttcactc 257 |||||||||||||||||||| Sbjct: 58 catctgggacaccttcactc 77
>emb|BX930319.2| Gallus gallus finished cDNA, clone ChEST1027d4 Length = 1120 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 catctgggacaccttcactc 257 |||||||||||||||||||| Sbjct: 269 catctgggacaccttcactc 288
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ggagaggggggctcttctcc 80 |||||||||||||||||||| Sbjct: 21450123 ggagaggggggctcttctcc 21450104
>gb|AF252816.1|AF252816 Drosophila simulans strain sim8 X gene, partial cds Length = 1425 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cggcaccgcctcctccgcca 200 |||||||||||||||||||| Sbjct: 1147 cggcaccgcctcctccgcca 1128
>gb|AF252815.1|AF252815 Drosophila simulans strain sim7 X gene, partial cds Length = 1425 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cggcaccgcctcctccgcca 200 |||||||||||||||||||| Sbjct: 1147 cggcaccgcctcctccgcca 1128
>gb|AF252811.1|AF252811 Drosophila simulans strain sim3 X gene, partial cds Length = 1425 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cggcaccgcctcctccgcca 200 |||||||||||||||||||| Sbjct: 1147 cggcaccgcctcctccgcca 1128
>gb|AF252809.1|AF252809 Drosophila simulans strain sim1 X gene, partial cds Length = 1425 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cggcaccgcctcctccgcca 200 |||||||||||||||||||| Sbjct: 1147 cggcaccgcctcctccgcca 1128
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 ccagcggcggcgtccatggcgccg 143 |||||||||||||||| ||||||| Sbjct: 5721033 ccagcggcggcgtccacggcgccg 5721056
>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1729_E01 Length = 155527 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ggagaggggggctcttctcc 80 |||||||||||||||||||| Sbjct: 94179 ggagaggggggctcttctcc 94160
>dbj|AK121935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107A08, full insert sequence Length = 2096 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 172 gttcatcttcggcaccgcctcctccgcc 199 ||||||||||||| ||| |||||||||| Sbjct: 345 gttcatcttcggcgccggctcctccgcc 372
>dbj|AK107555.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B03, full insert sequence Length = 1312 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cggcggcgtccatggcgccg 143 |||||||||||||||||||| Sbjct: 652 cggcggcgtccatggcgccg 633
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aaccgacatgaacatggacg 362 |||||||||||||||||||| Sbjct: 2758578 aaccgacatgaacatggacg 2758559
>dbj|AP003153.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-485C23, complete sequences Length = 156444 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gggctcttctcctccccgctctag 92 |||||||||||||||| ||||||| Sbjct: 120230 gggctcttctcctcccagctctag 120207
>dbj|AP003152.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-356B22, complete sequences Length = 190116 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 gggctcttctcctccccgctctag 92 |||||||||||||||| ||||||| Sbjct: 42750 gggctcttctcctcccagctctag 42727
>gb|AC004156.1|AC004156 Homo sapiens chromosome 19, cosmid R33586, complete sequence Length = 41702 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tggaatggagaggggggctc 74 |||||||||||||||||||| Sbjct: 36591 tggaatggagaggggggctc 36610
>gb|AC147444.4| Gallus gallus BAC clone CH261-16A3 from chromosome unknown, complete sequence Length = 242861 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 catctgggacaccttcactc 257 |||||||||||||||||||| Sbjct: 227487 catctgggacaccttcactc 227506
>gb|AC165248.2| Mus musculus BAC clone RP24-219D2 from chromosome 16, complete sequence Length = 190373 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 gggctcttctcctccccgctctag 92 |||||||||||||||| ||||||| Sbjct: 167534 gggctcttctcctcccagctctag 167557
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cggcggcgtccatggcgccg 143 |||||||||||||||||||| Sbjct: 52308 cggcggcgtccatggcgccg 52289 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,801,865 Number of Sequences: 3902068 Number of extensions: 3801865 Number of successful extensions: 65837 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65201 Number of HSP's gapped (non-prelim): 624 length of query: 493 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 471 effective length of database: 17,147,199,772 effective search space: 8076331092612 effective search space used: 8076331092612 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)