ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast26c01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189370.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 540 Score = 468 bits (236), Expect = e-129 Identities = 347/384 (90%) Strand = Plus / Plus Query: 80 atgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggagtc 139 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1 atgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccatgagggagtc 60 Query: 140 ttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacctc 199 ||||| |||||||||||||||||||||||||||||||| |||| |||| | ||| | Sbjct: 61 ttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgcccaacttg 120 Query: 200 gaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttctcg 259 ||||| || ||||||||||||||||||||||| |||||||| || ||||||||||||||| Sbjct: 121 gaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggagaccttctcg 180 Query: 260 tggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctc 319 ||||||||||||||||||||||||||||| || ||||||||| |||||||| || |||| Sbjct: 181 tggcagcactactactggtacctgaccaatgatggcattgagcacctccgcagctacctc 240 Query: 320 aacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtcccgc 379 |||||||| |||||| | ||||| ||||||||||||||||| |||||||||||||| ||| Sbjct: 241 aacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagcccccgtctcgc 300 Query: 380 cccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtgac 439 || |||||||||||||| || |||||||||||||| || || ||||| |||||||||||| Sbjct: 301 ccattcggctctggccctcctggtgaccgccccagaggcccgcctcgctttgagggtgac 360 Query: 440 aggcctaggtatggtgacagggat 463 ||||| |||| ||||||||||||| Sbjct: 361 aggcccaggtttggtgacagggat 384
>dbj|AK073846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070I05, full insert sequence Length = 900 Score = 464 bits (234), Expect = e-127 Identities = 348/386 (90%) Strand = Plus / Plus Query: 78 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 137 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 87 ccatgatcatctgcaagaagaaccgccgcgagatctgcaagtacctcttccatgagggag 146 Query: 138 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 197 ||||||| |||||||||||||||||||||||||||||||| |||| |||| | ||| Sbjct: 147 tcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtgcccaact 206 Query: 198 tcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttct 257 | ||||| || ||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 207 tggaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggagaccttct 266 Query: 258 cgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcc 317 ||||||||||||||||||||||||||||||| || ||||||||| |||||||| || || Sbjct: 267 cgtggcagcactactactggtacctgaccaatgatggcattgagcacctccgcagctacc 326 Query: 318 tcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtccc 377 |||||||||| |||||| | ||||| ||||||||||||||||| |||||||||||||| | Sbjct: 327 tcaacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagcccccgtctc 386 Query: 378 gccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtg 437 |||| |||||||||||||| || |||||||||||||| || || ||||| |||||||||| Sbjct: 387 gcccattcggctctggccctcctggtgaccgccccagaggcccgcctcgctttgagggtg 446 Query: 438 acaggcctaggtatggtgacagggat 463 ||||||| |||| ||||||||||||| Sbjct: 447 acaggcccaggtttggtgacagggat 472
>gb|BT016501.1| Zea mays clone Contig334 mRNA sequence Length = 841 Score = 432 bits (218), Expect = e-118 Identities = 344/386 (89%) Strand = Plus / Plus Query: 78 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 137 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | Sbjct: 62 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacatcttccatgaggggg 121 Query: 138 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 197 | | || ||||||||||||||||||||||||||||||||| || | || | | |||| Sbjct: 122 ttctatatgccaagaaggactacaacctggccaagcaccccaagcttgacgtgcccaacc 181 Query: 198 tcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttct 257 | ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 182 tggaggtgattaagctcatgcagagcttcaagtccaaggagtatgtcagggagaccttct 241 Query: 258 cgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcc 317 | |||||| |||||||||||||||| |||||||| ||||||||| |||||||| ||||| Sbjct: 242 cctggcagtactactactggtacctcaccaacgatggcattgagcacctccgcagcttcc 301 Query: 318 tcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtccc 377 ||||||||||||| ||| | |||||||||||||||||||||||| ||||||||||||||| Sbjct: 302 tcaacctgccgtcagaggttgtgcccaacaccctcaagaagtcctccaagcccccgtccc 361 Query: 378 gccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtg 437 | ||||| |||||||||||||| |||||||||||||||||||| ||||| |||| || | Sbjct: 362 gtccctttggctctggcccaccgggtgaccgccccaggggtccccctcgctttggggaag 421 Query: 438 acaggcctaggtatggtgacagggat 463 |||| ||||||| ||| || |||||| Sbjct: 422 acagacctaggtttggggatagggat 447
>ref|XM_472497.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 552 Score = 333 bits (168), Expect = 3e-88 Identities = 327/380 (86%) Strand = Plus / Plus Query: 80 atgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggagtc 139 ||||||||| | |||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1 atgatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaagagggagtg 60 Query: 140 ttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacctc 199 |||| ||||||||||||||||||||||| |||||||| ||| |||||| ||||||| Sbjct: 61 ctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgccgaacctg 120 Query: 200 gaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttctcg 259 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttctcc 180 Query: 260 tggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctc 319 |||||| |||||||||||||||| |||||||| ||||||||| ||| |||| || ||| Sbjct: 181 tggcagtactactactggtacctcaccaacgatggcattgagcacctgcgcaactacctt 240 Query: 320 aacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtcccgc 379 |||||||| |||||||| ||||| ||| ||||||||||| |||| ||| || |||| Sbjct: 241 aacctgccatctgagattgtgcctgccacactcaagaagtctgccaggccacctggccgc 300 Query: 380 cccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtgac 439 || || || ||||||||||| || |||||||| ||||| || ||||| ||||| || ||| Sbjct: 301 ccatttggttctggcccacctggcgaccgcccaaggggcccgcctcgctttgaaggggac 360 Query: 440 aggcctaggtatggtgacag 459 ||||| |||| ||||||||| Sbjct: 361 aggccaaggtttggtgacag 380
>dbj|AK102190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087A06, full insert sequence Length = 902 Score = 333 bits (168), Expect = 3e-88 Identities = 330/384 (85%) Strand = Plus / Plus Query: 76 cgccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggaggg 135 ||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 90 cgccatgatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaagaggg 149 Query: 136 agtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaa 195 ||| |||| ||||||||||||||||||||||| |||||||| ||| |||||| |||| Sbjct: 150 agtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgccgaa 209 Query: 196 cctcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagacctt 255 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 210 cctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagacctt 269 Query: 256 ctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcacctt 315 ||| |||||| |||||||||||||||| |||||||| ||||||||| ||| |||| || Sbjct: 270 ctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgcaacta 329 Query: 316 cctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtc 375 ||| |||||||| |||||||| ||||| ||| ||| ||||||| |||| ||| || Sbjct: 330 ccttaacctgccatctgagattgtgcctgccacactcgagaagtctgccaggccacctgg 389 Query: 376 ccgccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgaggg 435 |||||| || || ||||||||||| || |||||||| ||||| || ||||| ||||| || Sbjct: 390 ccgcccatttggttctggcccacctggcgaccgcccaaggggcccgcctcgctttgaagg 449 Query: 436 tgacaggcctaggtatggtgacag 459 |||||||| |||| ||||||||| Sbjct: 450 ggacaggccaaggtttggtgacag 473
>gb|AY103548.1| Zea mays PCO091529 mRNA sequence Length = 1541 Score = 329 bits (166), Expect = 5e-87 Identities = 331/386 (85%) Strand = Plus / Plus Query: 78 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 137 ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 245 ccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttcaaggagggcg 304 Query: 138 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 197 | |||| ||||||||||||||||||||||| |||||||| ||| |||||| | |||| Sbjct: 305 tgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgcccaacc 364 Query: 198 tcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttct 257 || |||| |||||||||||||||||||| |||||||||||||| || ||||||||||||| Sbjct: 365 tccaggtgatcaagctcatgcagagctttaagtccaaggagtatgttagggagaccttct 424 Query: 258 cgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcc 317 | |||||| ||||||||||||| || |||||||| ||||||||| ||| |||| || || Sbjct: 425 cctggcagtactactactggtatctcaccaacgatggcattgagcacctacgcaactacc 484 Query: 318 tcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtccc 377 | ||||| ||||||||||||||||| ||| ||||||||||| |||||||| || || Sbjct: 485 tgaacctcccgtctgagatcgtgcctgccacgctcaagaagtctgccaagccacctggcc 544 Query: 378 gccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtg 437 |||| || ||||||||||| || ||||||||||| ||||| || ||||||||| || | Sbjct: 545 gcccatttggctctggccctcctggtgaccgcccaaggggcccaggtcgttttgacggcg 604 Query: 438 acaggcctaggtatggtgacagggat 463 ||||||| |||| ||||||||||||| Sbjct: 605 acaggccaaggtttggtgacagggat 630 Score = 184 bits (93), Expect = 2e-43 Identities = 144/161 (89%) Strand = Plus / Plus Query: 141 tgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacctcg 200 |||| ||||||||||||||||||||||| |||||||| ||| | |||| | |||||| Sbjct: 21 tgtatgccaagaaggactacaacctggcgaagcacccacagattgatgtgcccaacctcc 80 Query: 201 aggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttctcgt 260 |||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | Sbjct: 81 aggtgatcaagctcatgcagagcttcaagtccaaggagtatgtcagagagaccttctcct 140 Query: 261 ggcagcactactactggtacctgaccaacgacggcattgag 301 ||||| |||||||||||||||| |||||||| ||||||||| Sbjct: 141 ggcagtactactactggtacctcaccaacgatggcattgag 181
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 327 bits (165), Expect = 2e-86 Identities = 255/285 (89%) Strand = Plus / Minus Query: 131 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 190 |||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| Sbjct: 42419109 gagggagtcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtg 42419050 Query: 191 tcgaacctcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 | ||| | ||||| || ||||||||||||||||||||||| |||||||| || |||||| Sbjct: 42419049 cccaacttggaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggag 42418990 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgc 310 |||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 42418989 accttctcgtggcagcactactactggtacctgaccaatgatggcattgagcacctccgc 42418930 Query: 311 accttcctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagccc 370 | || |||||||||||| |||||| | ||||| ||||||||||||||||| ||||||||| Sbjct: 42418929 agctacctcaacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagccc 42418870 Query: 371 ccgtcccgccccttcggctctggcccacccggtgaccgccccagg 415 ||||| ||||| |||||||||||||| || ||||||||||||||| Sbjct: 42418869 ccgtctcgcccattcggctctggccctcctggtgaccgccccagg 42418825 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 82 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 129 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42419508 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 42419461 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 422 cctcgttttgagggtgacaggcctaggtatggtgacagggat 463 ||||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 42418335 cctcgctttgagggtgacaggcccaggtttggtgacagggat 42418294 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 41 cgcggcgccgccgtctccgtccccgccgc 69 ||||||||||||||| ||||| ||||||| Sbjct: 33794464 cgcggcgccgccgtcgccgtcgccgccgc 33794436
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 327 bits (165), Expect = 2e-86 Identities = 255/285 (89%) Strand = Plus / Minus Query: 131 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 190 |||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| Sbjct: 78447 gagggagtcttgtatgccaagaaggactacaacctggccaagcacccaaaggttgatgtg 78388 Query: 191 tcgaacctcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 | ||| | ||||| || ||||||||||||||||||||||| |||||||| || |||||| Sbjct: 78387 cccaacttggaggtgattaagctcatgcagagcttcaagtcaaaggagtatgtgagggag 78328 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgc 310 |||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct: 78327 accttctcgtggcagcactactactggtacctgaccaatgatggcattgagcacctccgc 78268 Query: 311 accttcctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagccc 370 | || |||||||||||| |||||| | ||||| ||||||||||||||||| ||||||||| Sbjct: 78267 agctacctcaacctgccatctgaggttgtgcctaacaccctcaagaagtctgccaagccc 78208 Query: 371 ccgtcccgccccttcggctctggcccacccggtgaccgccccagg 415 ||||| ||||| |||||||||||||| || ||||||||||||||| Sbjct: 78207 ccgtctcgcccattcggctctggccctcctggtgaccgccccagg 78163 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 82 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 129 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78846 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 78799 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 422 cctcgttttgagggtgacaggcctaggtatggtgacagggat 463 ||||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 77673 cctcgctttgagggtgacaggcccaggtttggtgacagggat 77632
>dbj|AB054123.1| Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein S10, complete cds Length = 756 Score = 309 bits (156), Expect = 4e-81 Identities = 327/384 (85%) Strand = Plus / Plus Query: 76 cgccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggaggg 135 ||||||||||||| | |||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 88 cgccatgatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttccaagaggg 147 Query: 136 agtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaa 195 ||| |||| ||||||||||||||||||||||| |||||||| ||| |||||| |||| Sbjct: 148 agtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtgccgaa 207 Query: 196 cctcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagacctt 255 ||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 cctgcaggtgatcaagttcatgcagagcttcaagtccaaggagtacgtcagggagacctt 267 Query: 256 ctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcacctt 315 ||| |||||| |||||||||||||||| |||||||| ||||||||| ||| | || || Sbjct: 268 ctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgctcaacta 327 Query: 316 cctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtc 375 ||| |||||||| |||||||| ||||| ||| ||||||||||| |||| ||| || Sbjct: 328 ccttaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggccacctgg 387 Query: 376 ccgccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgaggg 435 ||||| || || ||||||||||| || ||||| || ||||| || ||||| ||||| || Sbjct: 388 tcgcccatttggttctggcccacctggcgaccgtccaaggggcccgcctcgctttgaagg 447 Query: 436 tgacaggcctaggtatggtgacag 459 |||||||| |||| ||||||||| Sbjct: 448 ggacaggccaaggtttggtgacag 471
>gb|BT019280.1| Zea mays clone Contig953.F mRNA sequence Length = 872 Score = 299 bits (151), Expect = 4e-78 Identities = 304/355 (85%) Strand = Plus / Minus Query: 78 ccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagggag 137 ||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| | Sbjct: 794 ccatgatcatccccaagaagaaccgcaatgagatctgcaagtacctcttcaaggagggcg 735 Query: 138 tcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcgaacc 197 | |||| ||||||||||||||||||||||| |||||||| ||| | |||| | |||| Sbjct: 734 tgctgtatgccaagaaggactacaacctggcgaagcacccacagattgatgtgcccaacc 675 Query: 198 tcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttct 257 || |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 674 tccaggtgatcaagctcatgcagagcttcaagtccaaggagtatgtcagagagaccttct 615 Query: 258 cgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgcaccttcc 317 | |||||| |||||||||||||||| |||||||| ||||||||| ||| |||| || || Sbjct: 614 cctggcagtactactactggtacctcaccaacgatggcattgagcacctacgcaactacc 555 Query: 318 tcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtccc 377 | ||||| ||||||||||||||||| ||| ||||||||||| |||| ||| | | || Sbjct: 554 tgaacctcccgtctgagatcgtgcctgccacgctcaagaagtctgccaggccactgggcc 495 Query: 378 gccccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttga 432 | || || ||||||||||| || ||||||||||| ||||| ||| ||||||||| Sbjct: 494 gtccatttggctctggccctcctggtgaccgcccaaggggccctggtcgttttga 440
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 248 bits (125), Expect = 1e-62 Identities = 242/281 (86%) Strand = Plus / Plus Query: 131 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 190 |||||||| |||| ||||||||||||||||||||||| |||||||| ||| |||||| Sbjct: 152161 gagggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtg 152220 Query: 191 tcgaacctcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 152221 ccgaacctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 152280 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgc 310 |||||||| |||||| |||||||||||||||| |||||||| ||||||||| ||| ||| Sbjct: 152281 accttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgc 152340 Query: 311 accttcctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagccc 370 | || ||| |||||||| |||||||| ||||| ||| ||||||||||| |||| ||| Sbjct: 152341 aactaccttaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggcca 152400 Query: 371 ccgtcccgccccttcggctctggcccacccggtgaccgccc 411 || |||||| || || ||||||||||| || |||||||| Sbjct: 152401 cctggccgcccatttggttctggcccacctggcgaccgccc 152441 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 82 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 129 ||||||| | |||||||||||| ||||||||||||||||||||||| Sbjct: 151665 gatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttcca 151712
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 248 bits (125), Expect = 1e-62 Identities = 242/281 (86%) Strand = Plus / Plus Query: 131 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 190 |||||||| |||| ||||||||||||||||||||||| |||||||| ||| |||||| Sbjct: 21338687 gagggagtgctgtatgccaagaaggactacaacctggcgaagcacccgcagatcgatgtg 21338746 Query: 191 tcgaacctcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21338747 ccgaacctgcaggtgatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 21338806 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgagttcctccgc 310 |||||||| |||||| |||||||||||||||| |||||||| ||||||||| ||| ||| Sbjct: 21338807 accttctcctggcagtactactactggtacctcaccaacgatggcattgagcacctgcgc 21338866 Query: 311 accttcctcaacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagccc 370 | || ||| |||||||| |||||||| ||||| ||| ||||||||||| |||| ||| Sbjct: 21338867 aactaccttaacctgccatctgagattgtgcctgccacactcaagaagtctgccaggcca 21338926 Query: 371 ccgtcccgccccttcggctctggcccacccggtgaccgccc 411 || |||||| || || ||||||||||| || |||||||| Sbjct: 21338927 cctggccgcccatttggttctggcccacctggcgaccgccc 21338967 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 82 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 129 ||||||| | |||||||||||| ||||||||||||||||||||||| Sbjct: 21338191 gatcatcccgaagaagaaccgcaatgagatctgcaagtacctcttcca 21338238 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 cgtctccgtccccgccgcgcc 72 ||||||||||||||||||||| Sbjct: 29851235 cgtctccgtccccgccgcgcc 29851215 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 42 gcggcgccgccgtctccgtccccgccgc 69 |||||||||||||||||| | ||||||| Sbjct: 25153682 gcggcgccgccgtctccgccaccgccgc 25153655
>ref|XM_466144.1| Oryza sativa (japonica cultivar-group), mRNA Length = 853 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 75 tcgccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagg 134 |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 76 tcgccatgatcatccccaagaagaaccggaatgagatctgcaagtacctcttccaagagg 135 Query: 135 gagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcga 194 | || ||||||||||||||||||||||| |||| || ||||| ||| | |||| | | Sbjct: 136 gggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtgccaa 195 Query: 195 acctcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagacct 254 |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 196 accttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggagacct 255 Query: 255 tctcgtggcagcactactactggtacctgaccaacgacggcattgag 301 |||| |||||| |||||||||||||||| || || || ||||||||| Sbjct: 256 tctcctggcagtactactactggtacctcactaatgatggcattgag 302
>dbj|AK066564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073I17, full insert sequence Length = 853 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 75 tcgccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggagg 134 |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 76 tcgccatgatcatccccaagaagaaccggaatgagatctgcaagtacctcttccaagagg 135 Query: 135 gagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcctcga 194 | || ||||||||||||||||||||||| |||| || ||||| ||| | |||| | | Sbjct: 136 gggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtgccaa 195 Query: 195 acctcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagacct 254 |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 196 accttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggagacct 255 Query: 255 tctcgtggcagcactactactggtacctgaccaacgacggcattgag 301 |||| |||||| |||||||||||||||| || || || ||||||||| Sbjct: 256 tctcctggcagtactactactggtacctcactaatgatggcattgag 302
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 165 bits (83), Expect = 2e-37 Identities = 149/171 (87%) Strand = Plus / Plus Query: 131 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 190 ||||| || ||||||||||||||||||||||| |||| || ||||| ||| | |||| Sbjct: 20669679 gagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtg 20669738 Query: 191 tcgaacctcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 | ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20669739 ccaaaccttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggag 20669798 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgag 301 |||||||| |||||| |||||||||||||||| || || || ||||||||| Sbjct: 20669799 accttctcctggcagtactactactggtacctcactaatgatggcattgag 20669849 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 82 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 129 ||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 20669149 gatcatccccaagaagaaccggaatgagatctgcaagtacctcttcca 20669196 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 38 cgccgcggcgccgccgtctccgtccccgccg 68 |||||||||||||||||| ||||| |||||| Sbjct: 21027310 cgccgcggcgccgccgtcgccgtcgccgccg 21027280 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cgccgcggcgccgccgtctc 57 |||||||||||||||||||| Sbjct: 20549721 cgccgcggcgccgccgtctc 20549740
>dbj|AP004775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0451A10 Length = 137046 Score = 165 bits (83), Expect = 2e-37 Identities = 149/171 (87%) Strand = Plus / Plus Query: 131 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 190 ||||| || ||||||||||||||||||||||| |||| || ||||| ||| | |||| Sbjct: 20785 gagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtg 20844 Query: 191 tcgaacctcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 | ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20845 ccaaaccttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggag 20904 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgag 301 |||||||| |||||| |||||||||||||||| || || || ||||||||| Sbjct: 20905 accttctcctggcagtactactactggtacctcactaatgatggcattgag 20955 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 82 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 129 ||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 20255 gatcatccccaagaagaaccggaatgagatctgcaagtacctcttcca 20302
>dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0040I22 Length = 134273 Score = 165 bits (83), Expect = 2e-37 Identities = 149/171 (87%) Strand = Plus / Plus Query: 131 gagggagtcttgtacgccaagaaggactacaacctggccaagcacccccaggtcgatgcc 190 ||||| || ||||||||||||||||||||||| |||| || ||||| ||| | |||| Sbjct: 66534 gagggggttttgtacgccaagaaggactacaatttggcaaaacacccacagattgatgtg 66593 Query: 191 tcgaacctcgaggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggag 250 | ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 66594 ccaaaccttcaggtcatcaagctcatgcagagcttcaagtccaaggagtatgtcagggag 66653 Query: 251 accttctcgtggcagcactactactggtacctgaccaacgacggcattgag 301 |||||||| |||||| |||||||||||||||| || || || ||||||||| Sbjct: 66654 accttctcctggcagtactactactggtacctcactaatgatggcattgag 66704 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 82 gatcatctccaagaagaaccgccgcgagatctgcaagtacctcttcca 129 ||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 66004 gatcatccccaagaagaaccggaatgagatctgcaagtacctcttcca 66051
>gb|BT017535.1| Zea mays clone EL01N0422A10.c mRNA sequence Length = 568 Score = 95.6 bits (48), Expect = 1e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 320 aacctgccgtctgagatcgtgcccaacaccctcaagaagtccgccaagcccccgtcccgc 379 ||||| ||||||||||||||||| ||| ||||||||||| |||||||| || |||| Sbjct: 29 aacctcccgtctgagatcgtgcctgccacgctcaagaagtctgccaagccacctggccgc 88 Query: 380 cccttcggctctggcccacccggtgaccgccccaggggtcctcctcgttttgagggtgac 439 || || ||||||||||| || ||||||||||| ||||| || |||||||| || ||| Sbjct: 89 ccatttggctctggccctcctggtgaccgcccaaggggcccaggccgttttgacggcgac 148 Query: 440 aggcctaggtatggtgacagggat 463 ||||| |||| ||||||||||||| Sbjct: 149 aggccaaggtttggtgacagggat 172
>gb|DQ268860.1| Solanum tuberosum clone 178H07 40S ribosomal protein S10-like protein mRNA, complete cds Length = 735 Score = 81.8 bits (41), Expect = 2e-12 Identities = 161/201 (80%) Strand = Plus / Plus Query: 107 gagatctgcaagtacctcttccaggagggagtcttgtacgccaagaaggactacaacctg 166 ||||||| ||||||||||||||| |||||||| | | || ||||||||||||||| || Sbjct: 64 gagatctccaagtacctcttccaagagggagtatgctttgctaagaaggactacaacttg 123 Query: 167 gccaagcacccccaggtcgatgcctcgaacctcgaggtcatcaagctcatgcagagcttc 226 || || || ||| | | |||| ||||||| | || || ||||| ||||||||||| Sbjct: 124 gcgaaacatcccaacattgatgtgccgaacctacaagtgattaagctgatgcagagcttt 183 Query: 227 aagtccaaggagtacgtcagggagaccttctcgtggcagcactactactggtacctgacc 286 ||||| |||||||| || | |||||||| | ||| ||||||||||||||| || ||| Sbjct: 184 aagtcaaaggagtatgtgcgtgagacctttgcttggatgcactactactggtatcttacc 243 Query: 287 aacgacggcattgagttcctc 307 || || ||||||||||||||| Sbjct: 244 aatgatggcattgagttcctc 264
>gb|DQ252484.1| Solanum tuberosum clone 048B07 40S ribosomal protein S10-like mRNA, complete cds Length = 738 Score = 81.8 bits (41), Expect = 2e-12 Identities = 161/201 (80%) Strand = Plus / Plus Query: 107 gagatctgcaagtacctcttccaggagggagtcttgtacgccaagaaggactacaacctg 166 ||||||| ||||||||||||||| |||||||| | | || ||||||||||||||| || Sbjct: 62 gagatctccaagtacctcttccaagagggagtatgctttgctaagaaggactacaacttg 121 Query: 167 gccaagcacccccaggtcgatgcctcgaacctcgaggtcatcaagctcatgcagagcttc 226 || || || ||| | | |||| ||||||| | || || ||||| ||||||||||| Sbjct: 122 gcgaaacatcccaacattgatgtgccgaacctacaagtgattaagctgatgcagagcttt 181 Query: 227 aagtccaaggagtacgtcagggagaccttctcgtggcagcactactactggtacctgacc 286 ||||| |||||||| || | |||||||| | ||| ||||||||||||||| || ||| Sbjct: 182 aagtcaaaggagtatgtgcgtgagacctttgcttggatgcactactactggtatcttacc 241 Query: 287 aacgacggcattgagttcctc 307 || || ||||||||||||||| Sbjct: 242 aatgatggcattgagttcctc 262
>gb|DQ252521.1| Solanum tuberosum clone 111F10 40S ribosomal protein S10-like mRNA, complete cds Length = 859 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 77 gccatgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggaggga 136 |||||||| ||||| |||||||||| | ||||||| ||| ||||||||||| |||||| Sbjct: 46 gccatgattatctcagagaagaaccgtagagagatctccaaatacctcttccaagaggga 105 Query: 137 gtcttgtacgccaagaaggactacaacctggccaagca 174 || | ||||| |||||||| |||||| |||||||||| Sbjct: 106 gtgtgctacgcgaagaaggattacaacttggccaagca 143 Score = 69.9 bits (35), Expect = 7e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 201 aggtcatcaagctcatgcagagcttcaagtccaaggagtacgtcagggagaccttctcgt 260 |||| ||||| || |||||||||||||| || |||||||| || | ||||| ||| | | Sbjct: 170 aggttatcaaactgatgcagagcttcaaatctaaggagtatgttcgcgagacattcgctt 229 Query: 261 ggcagcactactactggtacctgaccaacgacggcattgagttcctc 307 || |||||||||||||||||| || || || ||||||||||||||| Sbjct: 230 ggatgcactactactggtaccttacaaatgatggcattgagttcctc 276 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 428 tttgagggtgacaggcctaggtatggtgacag 459 ||||||||||| ||||| |||||||| ||||| Sbjct: 394 tttgagggtgataggccaaggtatggcgacag 425
>emb|AJ538899.1|NTA538899 Nicotiana tabacum cDNA-AFLP-fragment BT2-M33-002 Length = 447 Score = 73.8 bits (37), Expect = 4e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 215 atgcagagcttcaagtccaaggagtacgtcagggagaccttctcgtggcagcactactac 274 |||||||| |||||||| ||||| ||||| | |||||||| | ||| ||||||||| Sbjct: 51 atgcagagtttcaagtcgaaggaatacgtgcgtgagacctttgcttggatgcactactat 110 Query: 275 tggtacctgaccaacgacggcattgagttcctc 307 ||||| |||||||| |||||||||||||||||| Sbjct: 111 tggtatctgaccaatgacggcattgagttcctc 143
>ref|NM_118706.2| Arabidopsis thaliana structural constituent of ribosome AT4G25740 transcript variant AT4G25740.1 mRNA, complete cds Length = 746 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 177 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 220
>ref|NM_001036641.1| Arabidopsis thaliana structural constituent of ribosome AT4G25740 transcript variant AT4G25740.2 mRNA, complete cds Length = 736 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 192 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 235
>gb|AY113926.1| Arabidopsis thaliana putative ribosomal protein S10 (At4g25740) mRNA, complete cds Length = 565 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 130 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 173
>gb|AY035172.1| Arabidopsis thaliana putative ribosomal protein S10 (At4g25740) mRNA, complete cds Length = 762 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 177 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 220
>emb|AL161563.2|ATCHRIV63 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 63 Length = 198777 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 190367 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 190324
>emb|AL050400.1|ATL73G19 Arabidopsis thaliana DNA chromosome 4, cosmid clone L73G19 (ESSA project) Length = 42446 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 38860 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 38817
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 5511 aagctcatgcagagtttcaagtccaaggagtacgttagggagac 5468
>emb|BX039192.1|CNS092EK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3DG06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 730 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 |||||||||||||| ||||||||||| || || |||| ||| ||| ||||||| | ||| Sbjct: 257 cactactactggtatctgaccaacgagggtatcgagtacctgcgcgccttcctgcatctg 316 Query: 326 ccgtctgagatcgtgcc 342 ||||| ||||||||||| Sbjct: 317 ccgtccgagatcgtgcc 333
>ref|XM_311275.2| Anopheles gambiae str. PEST ENSANGP00000017569 (ENSANGG00000015080), mRNA Length = 935 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 |||||||||||||| ||||||||||| || || |||| ||| ||| ||||||| | ||| Sbjct: 311 cactactactggtatctgaccaacgagggtatcgagtacctgcgcgccttcctgcatctg 370 Query: 326 ccgtctgagatcgtgcc 342 ||||| ||||||||||| Sbjct: 371 ccgtccgagatcgtgcc 387
>gb|DQ440253.1| Aedes aegypti clone AET-3036 ribosomal protein S10E mRNA, complete cds Length = 480 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagt 302 |||||||||||||||||||||||||| || ||||||| Sbjct: 190 cactactactggtacctgaccaacgagggtattgagt 226
>emb|CR937754.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB1YG04AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 624 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagt 302 |||||||||||||||||||||||||| || ||||||| Sbjct: 241 cactactactggtacctgaccaacgagggtattgagt 277
>emb|CR937727.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB1YH02AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 628 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagt 302 |||||||||||||||||||||||||| || ||||||| Sbjct: 240 cactactactggtacctgaccaacgagggtattgagt 276
>emb|CR937726.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 3-prime end of clone KW0AAB1YH02BBM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 610 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 266 cactactactggtacctgaccaacgacggcattgagt 302 |||||||||||||||||||||||||| || ||||||| Sbjct: 370 cactactactggtacctgaccaacgagggtattgagt 334
>gb|DQ066194.1| Ixodes scapularis isolate ISUFL81 40S ribosomal protein S10 mRNA, complete cds Length = 471 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 |||||||||||||||||||||||||| ||||| ||| ||| || ||||||| ||||| Sbjct: 190 cactactactggtacctgaccaacgagggcatccagtacctgcgggacttcctccacctg 249 Query: 326 ccgtctgagatcgtgcccaacaccctcaagaag 358 || | ||||| ||||| ||||||||||||| Sbjct: 250 ccccccgagattgtgccggccaccctcaagaag 282
>gb|BC099929.1| Mus musculus plectin 1, mRNA (cDNA clone IMAGE:30056202), partial cds Length = 2616 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattga 300 |||| ||||||||||||||||||||| |||||||| Sbjct: 389 cacttctactggtacctgaccaacgagggcattga 423
>ref|NM_201389.1| Mus musculus plectin 1 (Plec1), transcript variant 6, mRNA Length = 15438 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattga 300 |||| ||||||||||||||||||||| |||||||| Sbjct: 388 cacttctactggtacctgaccaacgagggcattga 422
>ref|XM_994758.1| PREDICTED: Mus musculus plectin 1 (Plec1), mRNA Length = 14982 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattga 300 |||| ||||||||||||||||||||| |||||||| Sbjct: 425 cacttctactggtacctgaccaacgagggcattga 459
>gb|AY480038.1| Mus musculus plectin 6 mRNA, complete cds Length = 15438 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattga 300 |||| ||||||||||||||||||||| |||||||| Sbjct: 388 cacttctactggtacctgaccaacgagggcattga 422
>gb|AF188009.1|AF188009 Mus musculus plectin isoform plec 1 (Plec1) mRNA, partial cds Length = 824 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattga 300 |||| ||||||||||||||||||||| |||||||| Sbjct: 388 cacttctactggtacctgaccaacgagggcattga 422
>gb|AF188008.1|AF188008 Mus musculus plectin isoform plec 1,2alpha (Plec1) mRNA, partial cds Length = 3075 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattga 300 |||| ||||||||||||||||||||| |||||||| Sbjct: 388 cacttctactggtacctgaccaacgagggcattga 422
>gb|AC110211.16| Mus musculus chromosome 15, clone RP23-192B21, complete sequence Length = 202844 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 266 cactactactggtacctgaccaacgacggcattga 300 |||| ||||||||||||||||||||| |||||||| Sbjct: 135484 cacttctactggtacctgaccaacgagggcattga 135450
>gb|AY850935.1| Pectinaria gouldii ribosomal protein S10 mRNA, complete cds Length = 605 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 242 gtcagggagaccttctcgtggcagcactactactggtacctgaccaacga 291 |||| ||||||||||| |||| |||||||||||||||||||| ||||| Sbjct: 186 gtcaaggagaccttctgctggcgacactactactggtacctgacaaacga 235
>gb|AY070896.1| Drosophila melanogaster LP04958 full insert cDNA Length = 1020 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 ||||||||||||||||| |||||||| || || ||| || |||| || |||| ||||| Sbjct: 545 cactactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctg 604 Query: 326 ccgtctgagatcgtgccc 343 ||| | |||||||||||| Sbjct: 605 ccgcccgagatcgtgccc 622
>ref|XM_780517.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S10 (LOC580462), mRNA Length = 561 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacga 291 |||||||||||||||||||||||||| Sbjct: 203 cactactactggtacctgaccaacga 228
>ref|NM_167668.1| Drosophila melanogaster Ribosomal protein S10b CG14206-RB, transcript variant B (RpS10b), mRNA Length = 746 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 ||||||||||||||||| |||||||| || || ||| || |||| || |||| ||||| Sbjct: 291 cactactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctg 350 Query: 326 ccgtctgagatcgtgccc 343 ||| | |||||||||||| Sbjct: 351 ccgcccgagatcgtgccc 368
>ref|NM_134480.2| Drosophila melanogaster Ribosomal protein S10b CG14206-RC, transcript variant C (RpS10b), mRNA Length = 731 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 ||||||||||||||||| |||||||| || || ||| || |||| || |||| ||||| Sbjct: 276 cactactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctg 335 Query: 326 ccgtctgagatcgtgccc 343 ||| | |||||||||||| Sbjct: 336 ccgcccgagatcgtgccc 353
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone BACR10M08, complete sequence Length = 180213 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 ||||||||||||||||| |||||||| || || ||| || |||| || |||| ||||| Sbjct: 139773 cactactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctg 139832 Query: 326 ccgtctgagatcgtgccc 343 ||| | |||||||||||| Sbjct: 139833 ccgcccgagatcgtgccc 139850
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete sequence Length = 346474 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcattgagttcctccgcaccttcctcaacctg 325 ||||||||||||||||| |||||||| || || ||| || |||| || |||| ||||| Sbjct: 245539 cactactactggtacctcaccaacgagggaatcgaggagctgcgcagctacctccacctg 245598 Query: 326 ccgtctgagatcgtgccc 343 ||| | |||||||||||| Sbjct: 245599 ccgcccgagatcgtgccc 245616
>ref|NM_124643.2| Arabidopsis thaliana structural constituent of ribosome AT5G52650 mRNA, complete cds Length = 778 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 202 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 245
>ref|NM_022401.1| Rattus norvegicus plectin 1 (Plec1), mRNA Length = 15231 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcat 297 |||| ||||||||||||||||||||| ||||| Sbjct: 205 cacttctactggtacctgaccaacgagggcat 236
>gb|AY480027.1| Rattus norvegicus plectin 6 mRNA, complete cds Length = 15420 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcat 297 |||| ||||||||||||||||||||| ||||| Sbjct: 396 cacttctactggtacctgaccaacgagggcat 427
>gb|AY122932.1| Arabidopsis thaliana unknown protein (At5g52650) mRNA, complete cds Length = 571 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 130 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 173
>gb|AY065217.1| Arabidopsis thaliana unknown protein (At5g52650) mRNA, complete cds Length = 778 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 195 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 238
>emb|X59601.1|RNPLECT Rat mRNA for plectin Length = 15231 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacgacggcat 297 |||| ||||||||||||||||||||| ||||| Sbjct: 205 cacttctactggtacctgaccaacgagggcat 236
>emb|BX830280.1|CNS0A19J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 752 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 178 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 221
>emb|BX830062.1|CNS0A1D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 750 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 176 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 219
>emb|BX829499.1|CNS0A1BF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB17ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 592 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 27 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 70
>dbj|AB025606.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F6N7 Length = 74282 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 209 aagctcatgcagagcttcaagtccaaggagtacgtcagggagac 252 ||||| |||||||| ||||| ||||||||||| || |||||||| Sbjct: 35900 aagcttatgcagagtttcaaatccaaggagtatgttagggagac 35857
>ref|XM_466203.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2208 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 38 cgccgcggcgccgccgtctccgtccccgccg 68 |||||||||||||||||| ||||| |||||| Sbjct: 294 cgccgcggcgccgccgtcgccgtcgccgccg 324
>ref|XM_418029.1| PREDICTED: Gallus gallus similar to 40S ribosomal protein S10 (LOC419904), mRNA Length = 594 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 271 ctactggtacctgaccaacgacggcat 297 ||||||||||||||||||||| ||||| Sbjct: 254 ctactggtacctgaccaacgagggcat 280
>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_F08 Length = 105979 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 38 cgccgcggcgccgccgtctccgtccccgccg 68 |||||||||||||||||| ||||| |||||| Sbjct: 29055 cgccgcggcgccgccgtcgccgtcgccgccg 29025
>gb|AY961467.1| Phytophthora infestans clone MY-06-E-07 ribosomal protein S10 mRNA, complete cds Length = 546 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 194 aacctcgaggtcatcaagctcatgcag 220 |||||| |||||||||||||||||||| Sbjct: 139 aacctccaggtcatcaagctcatgcag 165
>ref|NM_123516.2| Arabidopsis thaliana structural constituent of ribosome AT5G41520 mRNA, complete cds Length = 807 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 98 aaccgccgcgagatctgcaagtacctcttc 127 |||||||| ||||||| ||||||||||||| Sbjct: 97 aaccgccgtgagatctccaagtacctcttc 126
>gb|AY231709.1| Drosophila yakuba clone yak-em_CG14206 mRNA sequence Length = 405 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 266 cactactactggtacctgaccaacga 291 ||||||||||||||||| |||||||| Sbjct: 115 cactactactggtacctcaccaacga 140
>gb|AF375440.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds Length = 780 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 98 aaccgccgcgagatctgcaagtacctcttc 127 |||||||| ||||||| ||||||||||||| Sbjct: 97 aaccgccgtgagatctccaagtacctcttc 126
>gb|AY060539.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds Length = 543 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 98 aaccgccgcgagatctgcaagtacctcttc 127 |||||||| ||||||| ||||||||||||| Sbjct: 19 aaccgccgtgagatctccaagtacctcttc 48
>gb|AY037240.1| Arabidopsis thaliana AT5g41520/MBK23_4 mRNA, complete cds Length = 781 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 98 aaccgccgcgagatctgcaagtacctcttc 127 |||||||| ||||||| ||||||||||||| Sbjct: 97 aaccgccgtgagatctccaagtacctcttc 126
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 40 ccgcggcgccgccgtctccgtccccg 65 |||||||||||||||| ||||||||| Sbjct: 137648 ccgcggcgccgccgtccccgtccccg 137623
>emb|BX830030.1|CNS0A1DV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 828 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 98 aaccgccgcgagatctgcaagtacctcttc 127 |||||||| ||||||| ||||||||||||| Sbjct: 107 aaccgccgtgagatctccaagtacctcttc 136
>emb|BX832280.1|CNS0A13B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZH01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 783 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 98 aaccgccgcgagatctgcaagtacctcttc 127 |||||||| ||||||| ||||||||||||| Sbjct: 91 aaccgccgtgagatctccaagtacctcttc 120
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 40 ccgcggcgccgccgtctccgtccccg 65 |||||||||||||||| ||||||||| Sbjct: 2544 ccgcggcgccgccgtccccgtccccg 2519
>dbj|AP006751.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1460A05 Length = 143371 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 40 ccgcggcgccgccgtctccgtccccg 65 |||||||||||||||| ||||||||| Sbjct: 137648 ccgcggcgccgccgtccccgtccccg 137623
>dbj|AB005233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK23 Length = 79837 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Minus Query: 98 aaccgccgcgagatctgcaagtacctcttc 127 |||||||| ||||||| ||||||||||||| Sbjct: 5407 aaccgccgtgagatctccaagtacctcttc 5378
>dbj|AK111058.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-D04, full insert sequence Length = 1109 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 40 ccgcggcgccgccgtctccgtccccg 65 |||||||||||||||| ||||||||| Sbjct: 136 ccgcggcgccgccgtccccgtccccg 111
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 40 ccgcggcgccgccgtctccgtccccg 65 |||||||||||||||| ||||||||| Sbjct: 82894 ccgcggcgccgccgtccccgtccccg 82919
>ref|XM_473720.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1089 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 cgtctccgtccccgccgcgcc 72 ||||||||||||||||||||| Sbjct: 150 cgtctccgtccccgccgcgcc 130
>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete sequence Length = 184079 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 401 ggtgaccgccccaggggtcct 421 ||||||||||||||||||||| Sbjct: 94677 ggtgaccgccccaggggtcct 94697
>emb|AL807749.21| Zebrafish DNA sequence from clone CH211-197F20, complete sequence Length = 198777 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 gcattgagttcctccgcacct 314 ||||||||||||||||||||| Sbjct: 35514 gcattgagttcctccgcacct 35494
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 37 acgccgcggcgccgccgtctccgtccccg 65 |||||||||||||| ||||||||| |||| Sbjct: 181178 acgccgcggcgccggcgtctccgtgcccg 181206
>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0691E06 Length = 166497 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 41 cgcggcgccgccgtctccgtccccgccgc 69 ||||||||||||||| ||||| ||||||| Sbjct: 33511 cgcggcgccgccgtcgccgtcgccgccgc 33483
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 cgtctccgtccccgccgcgcc 72 ||||||||||||||||||||| Sbjct: 132161 cgtctccgtccccgccgcgcc 132141
>gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosome 17, complete sequence Length = 180189 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 401 ggtgaccgccccaggggtcct 421 ||||||||||||||||||||| Sbjct: 27810 ggtgaccgccccaggggtcct 27830
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cgccgtctccgtccccgccg 68 |||||||||||||||||||| Sbjct: 91663 cgccgtctccgtccccgccg 91644
>ref|XM_475510.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 576 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 ccgccgtctccgtccccgccgcgc 71 ||||||||||||||| |||||||| Sbjct: 476 ccgccgtctccgtcctcgccgcgc 499
>ref|XM_466124.1| Oryza sativa (japonica cultivar-group), mRNA Length = 699 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cgccgcggcgccgccgtctc 57 |||||||||||||||||||| Sbjct: 540 cgccgcggcgccgccgtctc 559
>ref|NM_196394.1| Oryza sativa (japonica cultivar-group) putative No apical meristem (NAM) protein (OSJNBa0044A10.11), mRNA Length = 1548 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 gccgcggcgccgccgtctcc 58 |||||||||||||||||||| Sbjct: 997 gccgcggcgccgccgtctcc 1016
>ref|XM_469541.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 37 acgccgcggcgccgccgtctccgtccccgccg 68 ||||||||||||||||||| ||| || ||||| Sbjct: 233 acgccgcggcgccgccgtcgccgccctcgccg 264
>ref|XM_469540.1| Oryza sativa (japonica cultivar-group), mRNA Length = 525 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 37 acgccgcggcgccgccgtctccgtccccgccg 68 ||||||||||||||||||| ||| || ||||| Sbjct: 268 acgccgcggcgccgccgtcgccgccctcgccg 237
>ref|XM_473082.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 489 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 42 gcggcgccgccgtctccgtccccgccgc 69 |||||||||||||||||| | ||||||| Sbjct: 379 gcggcgccgccgtctccgccaccgccgc 406
>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01, complete sequence Length = 122768 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 ccgccgtctccgtccccgccgcgc 71 ||||||||||||||| |||||||| Sbjct: 41778 ccgccgtctccgtcctcgccgcgc 41755
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 37 acgccgcggcgccgccgtctccgtccccgccg 68 ||||||||||||||||||| ||| || ||||| Sbjct: 28605248 acgccgcggcgccgccgtcgccgccctcgccg 28605279
>ref|XM_541830.2| PREDICTED: Canis familiaris similar to 2-phosphodiesterase (LOC484714), mRNA Length = 2053 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cgccgccgtctccgtccccgccgc 69 |||||||||||||||| ||||||| Sbjct: 125 cgccgccgtctccgtcgccgccgc 102
>ref|XM_571499.1| Cryptococcus neoformans var. neoformans JEC21 40s ribosomal protein s10 (CNF01650) partial mRNA Length = 737 Score = 40.1 bits (20), Expect = 6.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 80 atgatcatctccaagaagaaccgccgcgagatctgcaagtacctcttccaggaggg 135 |||||||| |||||| |||||||| | | |||| | ||||||||||| ||||||| Sbjct: 88 atgatcatttccaagcagaaccgcagggccatctacgagtacctcttcaaggaggg 143
>gb|AC090681.13| Homo sapiens 12 BAC RP11-369C14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 93582 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 tcaagctcatgcagagcttc 226 |||||||||||||||||||| Sbjct: 45225 tcaagctcatgcagagcttc 45206
>gb|AC009022.10| Homo sapiens chromosome 16 clone RP11-106J23, complete sequence Length = 190577 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 ctactggtacctgaccaacgacgg 294 |||||||||||| ||||||||||| Sbjct: 63816 ctactggtaccttaccaacgacgg 63839
>emb|CR589881.11| Zebrafish DNA sequence from clone DKEY-188M1 in linkage group 14, complete sequence Length = 179964 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ttgagttcctccgcaccttc 316 |||||||||||||||||||| Sbjct: 14600 ttgagttcctccgcaccttc 14619
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 42 gcggcgccgccgtctccgtccccgccgc 69 |||||||||||||||||| | ||||||| Sbjct: 35349 gcggcgccgccgtctccgccaccgccgc 35322
>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0044A10, from chromosome 10, complete sequence Length = 169270 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 gccgcggcgccgccgtctcc 58 |||||||||||||||||||| Sbjct: 39627 gccgcggcgccgccgtctcc 39646
>emb|BX649515.7| Zebrafish DNA sequence from clone CH211-120F15 in linkage group 3, complete sequence Length = 153400 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 ttgagttcctccgcaccttc 316 |||||||||||||||||||| Sbjct: 33499 ttgagttcctccgcaccttc 33518
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 cggcgccgccgtctccgtccccgc 66 ||||||||||||| |||||||||| Sbjct: 176803 cggcgccgccgtcaccgtccccgc 176826
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 gccgcggcgccgccgtctcc 58 |||||||||||||||||||| Sbjct: 13084108 gccgcggcgccgccgtctcc 13084127
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cgccgccgtctccgtccccgccgc 69 |||||||||| ||||||||||||| Sbjct: 9576466 cgccgccgtcgccgtccccgccgc 9576443
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 ccgccgtctccgtccccgccgcgc 71 ||||||||||||||| |||||||| Sbjct: 1086167 ccgccgtctccgtcctcgccgcgc 1086144
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 37 acgccgcggcgccgccgtctccgtccccgccg 68 ||||||||||||||||||| ||| || ||||| Sbjct: 28696572 acgccgcggcgccgccgtcgccgccctcgccg 28696603
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 37 acgccgcggcgccgccgtctccgtccccgccg 68 ||||||||||||||||||| ||| || ||||| Sbjct: 93648 acgccgcggcgccgccgtcgccgccctcgccg 93617
>gb|AY088678.1| Arabidopsis thaliana clone 91769 mRNA, complete sequence Length = 768 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 209 aagctcatgcagagcttcaagtccaaggagta 240 ||||| |||||||| ||||| ||||||||||| Sbjct: 204 aagcttatgcagagtttcaaatccaaggagta 235
>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1059D01 Length = 158792 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cgccgccgtctccgtccccgccgc 69 |||||||||| ||||||||||||| Sbjct: 84196 cgccgccgtcgccgtccccgccgc 84173
>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0051E21 Length = 137959 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 cgccgcggcgccgccgtctc 57 |||||||||||||||||||| Sbjct: 45279 cgccgcggcgccgccgtctc 45298
>ref|NM_211444.1| Eremothecium gossypii AGL285Cp (AGL285C), mRNA Length = 1323 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 cggcgccgccgtctccgtccccgc 66 ||||||||||||| |||||||||| Sbjct: 351 cggcgccgccgtcaccgtccccgc 328
>gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) gene, complete cds; and unknown gene Length = 18555 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 cgccgccgtctccgtccccg 65 |||||||||||||||||||| Sbjct: 8285 cgccgccgtctccgtccccg 8266
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 gccgcggcgccgccgtctcc 58 |||||||||||||||||||| Sbjct: 13091448 gccgcggcgccgccgtctcc 13091467
>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14, complete sequence Length = 150187 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 42 gcggcgccgccgtctccgtccccgccgc 69 |||||||||||||||||| | ||||||| Sbjct: 101109 gcggcgccgccgtctccgccaccgccgc 101082 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,074,868 Number of Sequences: 3902068 Number of extensions: 3074868 Number of successful extensions: 64254 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 63313 Number of HSP's gapped (non-prelim): 912 length of query: 463 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 441 effective length of database: 17,147,199,772 effective search space: 7561915099452 effective search space used: 7561915099452 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
