| Clone Name | bast25g05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_450893.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1290 Score = 329 bits (166), Expect = 4e-87 Identities = 271/306 (88%) Strand = Plus / Plus Query: 4 atggcccgaaatgcttaaattgaaagactggcctacttcaaatcattttgaagagctttt 63 |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 288 atggcctgaaatgcttaaattgaaggactggcctacatcaaatcattttgaagagctttt 347 Query: 64 gccttcgcatggagtggaatacatcaattctttaccctttcaaccgtacacaaatttgaa 123 |||||| |||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 348 gccttcccatggagttaaatacatgaattctttaccttttcaaccatacacaaacttgaa 407 Query: 124 atctggtttgctaagtgtttccgcattgcttcccgatgacattctaaagatcgacatggg 183 ||||||||||| | ||| || | |||||||| |||||||| ||||| | |||||||| Sbjct: 408 gtctggtttgctgaatgtctcaaccttgcttcctgatgacatcttaaagcttgacatggg 467 Query: 184 cccgaagtcatacatagcttatggctatgcacaggaacttggcagaggagattctgttac 243 ||| || ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 468 cccaaaatcatatatagcttatggctatgcacaggaacttggtagaggagattctgttac 527 Query: 244 gaagcttcattgtgatatatctgacgcagttaacgttttgatgcatactgcacaagttgc 303 |||||||| || ||| | ||||| |||||||||||||||||||||||||| |||||| Sbjct: 528 aaagcttcactgcgatttgtctgatgcagttaacgttttgatgcatactgctgaagttga 587 Query: 304 cccttc 309 |||||| Sbjct: 588 cccttc 593
>dbj|AK059445.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A06, full insert sequence Length = 1290 Score = 329 bits (166), Expect = 4e-87 Identities = 271/306 (88%) Strand = Plus / Plus Query: 4 atggcccgaaatgcttaaattgaaagactggcctacttcaaatcattttgaagagctttt 63 |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 288 atggcctgaaatgcttaaattgaaggactggcctacatcaaatcattttgaagagctttt 347 Query: 64 gccttcgcatggagtggaatacatcaattctttaccctttcaaccgtacacaaatttgaa 123 |||||| |||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 348 gccttcccatggagttaaatacatgaattctttaccttttcaaccatacacaaacttgaa 407 Query: 124 atctggtttgctaagtgtttccgcattgcttcccgatgacattctaaagatcgacatggg 183 ||||||||||| | ||| || | |||||||| |||||||| ||||| | |||||||| Sbjct: 408 gtctggtttgctgaatgtctcaaccttgcttcctgatgacatcttaaagcttgacatggg 467 Query: 184 cccgaagtcatacatagcttatggctatgcacaggaacttggcagaggagattctgttac 243 ||| || ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 468 cccaaaatcatatatagcttatggctatgcacaggaacttggtagaggagattctgttac 527 Query: 244 gaagcttcattgtgatatatctgacgcagttaacgttttgatgcatactgcacaagttgc 303 |||||||| || ||| | ||||| |||||||||||||||||||||||||| |||||| Sbjct: 528 aaagcttcactgcgatttgtctgatgcagttaacgttttgatgcatactgctgaagttga 587 Query: 304 cccttc 309 |||||| Sbjct: 588 cccttc 593
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 281 bits (142), Expect = 9e-73 Identities = 238/270 (88%) Strand = Plus / Plus Query: 4 atggcccgaaatgcttaaattgaaagactggcctacttcaaatcattttgaagagctttt 63 |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 13542845 atggcctgaaatgcttaaattgaaggactggcctacatcaaatcattttgaagagctttt 13542904 Query: 64 gccttcgcatggagtggaatacatcaattctttaccctttcaaccgtacacaaatttgaa 123 |||||| |||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 13542905 gccttcccatggagttaaatacatgaattctttaccttttcaaccatacacaaacttgaa 13542964 Query: 124 atctggtttgctaagtgtttccgcattgcttcccgatgacattctaaagatcgacatggg 183 ||||||||||| | ||| || | |||||||| |||||||| ||||| | |||||||| Sbjct: 13542965 gtctggtttgctgaatgtctcaaccttgcttcctgatgacatcttaaagcttgacatggg 13543024 Query: 184 cccgaagtcatacatagcttatggctatgcacaggaacttggcagaggagattctgttac 243 ||| || ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 13543025 cccaaaatcatatatagcttatggctatgcacaggaacttggtagaggagattctgttac 13543084 Query: 244 gaagcttcattgtgatatatctgacgcagt 273 |||||||| || ||| | ||||| ||||| Sbjct: 13543085 aaagcttcactgcgatttgtctgatgcagt 13543114 Score = 250 bits (126), Expect = 3e-63 Identities = 234/270 (86%) Strand = Plus / Plus Query: 4 atggcccgaaatgcttaaattgaaagactggcctacttcaaatcattttgaagagctttt 63 |||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||||| Sbjct: 13299249 atggcctgaaatgcttaaattgaatgactggcctatttcaaaccattttgaagagctttt 13299308 Query: 64 gccttcgcatggagtggaatacatcaattctttaccctttcaaccgtacacaaatttgaa 123 |||||| |||||||| |||||||||||||||| || |||||| | |||||||| ||||| Sbjct: 13299309 gccttctcatggagttaaatacatcaattctttgccttttcaagcatacacaaacttgaa 13299368 Query: 124 atctggtttgctaagtgtttccgcattgcttcccgatgacattctaaagatcgacatggg 183 ||||||||||| | ||| || |||||||||| |||||||| ||||| | |||||||| Sbjct: 13299369 gtctggtttgctgaatgtctcaacattgcttcctgatgacatcttaaagcttgacatggg 13299428 Query: 184 cccgaagtcatacatagcttatggctatgcacaggaacttggcagaggagattctgttac 243 || || ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 13299429 accaaaatcatatatagcttatggctatgcacaggagcttggtagaggagattctgttac 13299488 Query: 244 gaagcttcattgtgatatatctgacgcagt 273 || ||||| || ||| | ||||| ||||| Sbjct: 13299489 aaaacttcactgcgatttgtctgatgcagt 13299518 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 272 gttaacgttttgatgcatactgcacaagttgccccttctaaaggacaagaaaatgcaata 331 ||||||||||||||||||||||| ||||| ||||||| | | |||| ||| |||||| Sbjct: 13299847 gttaacgttttgatgcatactgccgaagttaacccttctgaggaacaaataaacgcaata 13299906 Query: 332 aaaaacttgaaagcaagacat 352 |||| ||||||| ||||||| Sbjct: 13299907 aaaagcttgaaaagaagacat 13299927 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 272 gttaacgttttgatgcatactgcacaagttgccccttc 309 ||||||||||||||||||||||| |||||| |||||| Sbjct: 13543442 gttaacgttttgatgcatactgctgaagttgacccttc 13543479
>dbj|AP006562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1175F05 Length = 126842 Score = 281 bits (142), Expect = 9e-73 Identities = 238/270 (88%) Strand = Plus / Plus Query: 4 atggcccgaaatgcttaaattgaaagactggcctacttcaaatcattttgaagagctttt 63 |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 117773 atggcctgaaatgcttaaattgaaggactggcctacatcaaatcattttgaagagctttt 117832 Query: 64 gccttcgcatggagtggaatacatcaattctttaccctttcaaccgtacacaaatttgaa 123 |||||| |||||||| ||||||| ||||||||||| |||||||| |||||||| ||||| Sbjct: 117833 gccttcccatggagttaaatacatgaattctttaccttttcaaccatacacaaacttgaa 117892 Query: 124 atctggtttgctaagtgtttccgcattgcttcccgatgacattctaaagatcgacatggg 183 ||||||||||| | ||| || | |||||||| |||||||| ||||| | |||||||| Sbjct: 117893 gtctggtttgctgaatgtctcaaccttgcttcctgatgacatcttaaagcttgacatggg 117952 Query: 184 cccgaagtcatacatagcttatggctatgcacaggaacttggcagaggagattctgttac 243 ||| || ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117953 cccaaaatcatatatagcttatggctatgcacaggaacttggtagaggagattctgttac 118012 Query: 244 gaagcttcattgtgatatatctgacgcagt 273 |||||||| || ||| | ||||| ||||| Sbjct: 118013 aaagcttcactgcgatttgtctgatgcagt 118042 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 272 gttaacgttttgatgcatactgcacaagttgccccttc 309 ||||||||||||||||||||||| |||||| |||||| Sbjct: 118370 gttaacgttttgatgcatactgctgaagttgacccttc 118407
>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0055N01 Length = 154783 Score = 250 bits (126), Expect = 3e-63 Identities = 234/270 (86%) Strand = Plus / Plus Query: 4 atggcccgaaatgcttaaattgaaagactggcctacttcaaatcattttgaagagctttt 63 |||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||||| Sbjct: 120683 atggcctgaaatgcttaaattgaatgactggcctatttcaaaccattttgaagagctttt 120742 Query: 64 gccttcgcatggagtggaatacatcaattctttaccctttcaaccgtacacaaatttgaa 123 |||||| |||||||| |||||||||||||||| || |||||| | |||||||| ||||| Sbjct: 120743 gccttctcatggagttaaatacatcaattctttgccttttcaagcatacacaaacttgaa 120802 Query: 124 atctggtttgctaagtgtttccgcattgcttcccgatgacattctaaagatcgacatggg 183 ||||||||||| | ||| || |||||||||| |||||||| ||||| | |||||||| Sbjct: 120803 gtctggtttgctgaatgtctcaacattgcttcctgatgacatcttaaagcttgacatggg 120862 Query: 184 cccgaagtcatacatagcttatggctatgcacaggaacttggcagaggagattctgttac 243 || || ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 120863 accaaaatcatatatagcttatggctatgcacaggagcttggtagaggagattctgttac 120922 Query: 244 gaagcttcattgtgatatatctgacgcagt 273 || ||||| || ||| | ||||| ||||| Sbjct: 120923 aaaacttcactgcgatttgtctgatgcagt 120952 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 272 gttaacgttttgatgcatactgcacaagttgccccttctaaaggacaagaaaatgcaata 331 ||||||||||||||||||||||| ||||| ||||||| | | |||| ||| |||||| Sbjct: 121281 gttaacgttttgatgcatactgccgaagttaacccttctgaggaacaaataaacgcaata 121340 Query: 332 aaaaacttgaaagcaagacat 352 |||| ||||||| ||||||| Sbjct: 121341 aaaagcttgaaaagaagacat 121361
>gb|BT014596.1| Lycopersicon esculentum clone 134071R, mRNA sequence Length = 3007 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 230 ggagattctgttacgaagcttcattgtgatatatctgacgcagttaacgttttgatgcat 289 |||||||| ||||| ||||||||||||||||| ||||| || || || |||| |||||| Sbjct: 1927 ggagattccgttacaaagcttcattgtgatatgtctgatgcggtgaatattttaatgcat 1986 Query: 290 actgc 294 ||||| Sbjct: 1987 actgc 1991
>gb|AC157490.18| Medicago truncatula clone mth2-123f23, complete sequence Length = 106571 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 215 caggaacttggcagaggagattctgttacgaagcttcattgtgatatatctgacgcagt 273 ||||||||||| | || |||||||| || ||||||||||||||||| ||||| ||||| Sbjct: 810 caggaacttgggcggggtgattctgtgactaagcttcattgtgatatgtctgatgcagt 868
>gb|AF003134.3| Caenorhabditis elegans cosmid ZC581, complete sequence Length = 38880 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Plus Query: 321 aaaatgcaataaaaaacttgaaa 343 ||||||||||||||||||||||| Sbjct: 7070 aaaatgcaataaaaaacttgaaa 7092
>ref|XM_697108.1| PREDICTED: Danio rerio hypothetical protein LOC554486 (LOC554486), mRNA Length = 2666 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 cagaggagattctgttacgaa 246 ||||||||||||||||||||| Sbjct: 1392 cagaggagattctgttacgaa 1412
>gb|AY921028.1| Acipenser sinensis microsatellite AS-033 sequence Length = 307 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 317 caagaaaatgcaataaaaaacttga 341 |||||||||||||||||||| |||| Sbjct: 267 caagaaaatgcaataaaaaaattga 291
>gb|BC045478.1| Danio rerio, clone IMAGE:3818440, mRNA Length = 3273 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 cagaggagattctgttacgaa 246 ||||||||||||||||||||| Sbjct: 2086 cagaggagattctgttacgaa 2106
>gb|BC057467.1| Danio rerio ribosomal protein S6 kinase, like, mRNA (cDNA clone MGC:66139 IMAGE:3818026), complete cds Length = 3272 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 cagaggagattctgttacgaa 246 ||||||||||||||||||||| Sbjct: 1981 cagaggagattctgttacgaa 2001
>emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chromosome 13, complete sequence Length = 183340 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 gaaaatgcaataaaaaacttg 340 ||||||||||||||||||||| Sbjct: 88559 gaaaatgcaataaaaaacttg 88579
>ref|NM_200073.1| Danio rerio ribosomal protein S6 kinase, like (rps6kal), mRNA Length = 3272 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 cagaggagattctgttacgaa 246 ||||||||||||||||||||| Sbjct: 1981 cagaggagattctgttacgaa 2001
>emb|AL935057.7| Mouse DNA sequence from clone RP23-90D6 on chromosome 2, complete sequence Length = 148247 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 ataaaaaacttgaaagcaaga 349 ||||||||||||||||||||| Sbjct: 38753 ataaaaaacttgaaagcaaga 38773
>ref|NM_116327.4| Arabidopsis thaliana transcription factor AT4G00990 mRNA, complete cds Length = 2804 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 agaggagattctgttacgaagcttcattgtgatatatctgacgc 270 ||||||||||| || || || ||||||||||| || |||||||| Sbjct: 1703 agaggagattcggtgacaaaacttcattgtgacatttctgacgc 1746
>gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, complete sequence Length = 257924 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tacacaaatttgaaatctgg 129 |||||||||||||||||||| Sbjct: 194568 tacacaaatttgaaatctgg 194587
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tatatctgacgcagttaacgtttt 282 |||||||||||| ||||||||||| Sbjct: 57658 tatatctgacgctgttaacgtttt 57681
>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence Length = 207024 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 agcttttgccttcgcatgga 76 |||||||||||||||||||| Sbjct: 72600 agcttttgccttcgcatgga 72619
>gb|AC132352.3| Mus musculus BAC clone RP24-97D9 from chromosome 6, complete sequence Length = 168117 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 atagcttatggctatgcaca 216 |||||||||||||||||||| Sbjct: 23933 atagcttatggctatgcaca 23952
>gb|AC134559.5| Mus musculus BAC clone RP24-332C4 from chromosome 8, complete sequence Length = 180692 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 tgttgtggcaatttttcaattgat 397 |||||||| ||||||||||||||| Sbjct: 138237 tgttgtggtaatttttcaattgat 138214
>ref|XM_548277.2| PREDICTED: Canis familiaris similar to cytokine receptor-like factor 3 (LOC491157), mRNA Length = 2912 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 acttcaaatcattttgaaga 57 |||||||||||||||||||| Sbjct: 1042 acttcaaatcattttgaaga 1061
>gb|AC125181.4| Mus musculus BAC clone RP23-324L6 from chromosome 8, complete sequence Length = 223306 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 tgttgtggcaatttttcaattgat 397 |||||||| ||||||||||||||| Sbjct: 15727 tgttgtggtaatttttcaattgat 15704
>gb|BC041255.1| Xenopus laevis hypothetical protein MGC52807, mRNA (cDNA clone MGC:52807 IMAGE:4724919), complete cds Length = 1976 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 aagacatgagggacaagatgaaaa 369 |||||||| ||||||||||||||| Sbjct: 95 aagacatgcgggacaagatgaaaa 118
>emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chromosome 1 Contains the 3' end of the KCNN3 gene for potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, a novel gene and the 5' end of the ADAR gene for adenosine deaminase, RNA-specific, complete sequence Length = 173014 Score = 40.1 bits (20), Expect = 5.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 347 agacatgagggacaagatgaaaaggaat 374 ||||||||||| |||||||||||||||| Sbjct: 110090 agacatgaggg-caagatgaaaaggaat 110116
>emb|AL391474.8| Human DNA sequence from clone RP13-115H14 on chromosome X Contains the 5' end of the gene for novel protein similar to rab11-binding protein (DKFZp686L20145) and a CpG island, complete sequence Length = 49018 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 agaaaatgcaataaaaaact 338 |||||||||||||||||||| Sbjct: 18560 agaaaatgcaataaaaaact 18579
>gb|AY096708.1| Arabidopsis thaliana unknown protein (At4g00990) mRNA, complete cds Length = 2554 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 agaggagattctgttacgaagcttcattgtgatatatctgacgc 270 ||||||||||| || || || ||||||||||| || |||||||| Sbjct: 1612 agaggagattcggtgacaaaacttcattgtgacatttctgacgc 1655
>gb|AY072204.1| Arabidopsis thaliana unknown protein (At4g00990) mRNA, complete cds Length = 2785 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 agaggagattctgttacgaagcttcattgtgatatatctgacgc 270 ||||||||||| || || || ||||||||||| || |||||||| Sbjct: 1705 agaggagattcggtgacaaaacttcattgtgacatttctgacgc 1748
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 atgacattctaaagatcgac 178 |||||||||||||||||||| Sbjct: 969709 atgacattctaaagatcgac 969690
>emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 3 Length = 196149 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 agaggagattctgttacgaagcttcattgtgatatatctgacgc 270 ||||||||||| || || || ||||||||||| || |||||||| Sbjct: 43615 agaggagattcggtgacaaaacttcattgtgacatttctgacgc 43658
>emb|AL080237.1|ATF3I3 Arabidopsis thaliana DNA chromosome 4, BAC clone F3I3, partial sequence (ESSA project) Length = 22145 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 agaggagattctgttacgaagcttcattgtgatatatctgacgc 270 ||||||||||| || || || ||||||||||| || |||||||| Sbjct: 2155 agaggagattcggtgacaaaacttcattgtgacatttctgacgc 2198
>emb|CR932801.1| Mus musculus chromosome 2, clone RPCI-21-331C08 strain 129/Sv, complete sequence Length = 107646 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 311 aaaggacaagaaaatgcaataaaa 334 ||||||||||| |||||||||||| Sbjct: 91000 aaaggacaagataatgcaataaaa 90977
>emb|CR361561.8| Zebrafish DNA sequence from clone CH211-218K8 in linkage group 25, complete sequence Length = 200274 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 320 gaaaatgcaataaaaaacttgaaa 343 ||||||||||||||||| |||||| Sbjct: 46755 gaaaatgcaataaaaaatttgaaa 46732
>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0023M11, from chromosome 10, complete sequence Length = 138668 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tatatctgacgcagttaacgtttt 282 |||||||||||| ||||||||||| Sbjct: 136326 tatatctgacgctgttaacgtttt 136349
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tatatctgacgcagttaacgtttt 282 |||||||||||| ||||||||||| Sbjct: 10216105 tatatctgacgctgttaacgtttt 10216128
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 acacaaatttgaaatctggt 130 |||||||||||||||||||| Sbjct: 10628056 acacaaatttgaaatctggt 10628037
>emb|BX827522.1|CNS0A48W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS69ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2667 Score = 40.1 bits (20), Expect = 5.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 227 agaggagattctgttacgaagcttcattgtgatatatctgacgc 270 ||||||||||| || || || ||||||||||| || |||||||| Sbjct: 1649 agaggagattcggtgacaaaacttcattgtgacatttctgacgc 1692
>gb|AC093675.4| Homo sapiens BAC clone RP11-592G13 from 2, complete sequence Length = 123182 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 325 tgcaataaaaaacttgaaagcaagacat 352 ||||||||||||||| ||| |||||||| Sbjct: 32736 tgcaataaaaaacttaaaatcaagacat 32709
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0018M09 Length = 157377 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 acacaaatttgaaatctggt 130 |||||||||||||||||||| Sbjct: 45746 acacaaatttgaaatctggt 45727
>gb|AC112975.14| Mus musculus chromosome 1, clone RP24-468G12, complete sequence Length = 175974 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gagggacaagatgaaaagga 372 |||||||||||||||||||| Sbjct: 75725 gagggacaagatgaaaagga 75744
>gb|AC153957.4| Mus musculus 10 BAC RP24-502B21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 182105 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 35 cctacttcaaatcattttgaagagcttt 62 |||||||||||| ||||| ||||||||| Sbjct: 135738 cctacttcaaattattttcaagagcttt 135765
>gb|AC159104.2| Mus musculus BAC clone RP23-246E2 from chromosome 13, complete sequence Length = 203694 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gacaagaaaatgcaataaaa 334 |||||||||||||||||||| Sbjct: 138616 gacaagaaaatgcaataaaa 138597
>dbj|AB079539.1| Cottus kazika IGF-I mRNA for insulin-like growth factor I, complete cds Length = 1500 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aatcattttgaagagctttt 63 |||||||||||||||||||| Sbjct: 901 aatcattttgaagagctttt 882
>gb|U47813.1|DIU47813 Dirofilaria immitis cyclophilin Dicyp-2 mRNA, complete cds Length = 666 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 caattgatggaagtaatgca 409 |||||||||||||||||||| Sbjct: 60 caattgatggaagtaatgca 79
>gb|U47811.1|BMU47811 Brugia malayi cyclophilin Bmcyp-2 mRNA, complete cds Length = 700 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 caattgatggaagtaatgca 409 |||||||||||||||||||| Sbjct: 60 caattgatggaagtaatgca 79
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tatatctgacgcagttaacgtttt 282 |||||||||||| ||||||||||| Sbjct: 10222144 tatatctgacgctgttaacgtttt 10222167
>emb|AL928572.5| Mouse DNA sequence from clone RP23-333P17 on chromosome 2, complete sequence Length = 154074 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 311 aaaggacaagaaaatgcaataaaa 334 ||||||||||| |||||||||||| Sbjct: 79608 aaaggacaagataatgcaataaaa 79585
>emb|AL731789.9| Mouse DNA sequence from clone RP23-52F6 on chromosome X, complete sequence Length = 218939 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 agaaaatgcaataaaaaact 338 |||||||||||||||||||| Sbjct: 167634 agaaaatgcaataaaaaact 167653 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,221,176 Number of Sequences: 3902068 Number of extensions: 4221176 Number of successful extensions: 100847 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 100615 Number of HSP's gapped (non-prelim): 233 length of query: 417 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 395 effective length of database: 17,147,199,772 effective search space: 6773143909940 effective search space used: 6773143909940 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)