ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast25g05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_450893.1| Oryza sativa (japonica cultivar-group), mRNA 329 4e-87
2dbj|AK059445.1| Oryza sativa (japonica cultivar-group) cDNA clon... 329 4e-87
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 281 9e-73
4dbj|AP006562.3| Oryza sativa (japonica cultivar-group) genomic D... 281 9e-73
5dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic D... 250 3e-63
6gb|BT014596.1| Lycopersicon esculentum clone 134071R, mRNA sequence 58 2e-05
7gb|AC157490.18| Medicago truncatula clone mth2-123f23, complete ... 54 4e-04
8gb|AF003134.3| Caenorhabditis elegans cosmid ZC581, complete seq... 46 0.091
9ref|XM_697108.1| PREDICTED: Danio rerio hypothetical protein LOC... 42 1.4
10gb|AY921028.1| Acipenser sinensis microsatellite AS-033 sequence 42 1.4
11gb|BC045478.1| Danio rerio, clone IMAGE:3818440, mRNA 42 1.4
12gb|BC057467.1| Danio rerio ribosomal protein S6 kinase, like, mR... 42 1.4
13emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chr... 42 1.4
14ref|NM_200073.1| Danio rerio ribosomal protein S6 kinase, like (... 42 1.4
15emb|AL935057.7| Mouse DNA sequence from clone RP23-90D6 on chrom... 42 1.4
16ref|NM_116327.4| Arabidopsis thaliana transcription factor AT4G0... 40 5.6
17gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, comp... 40 5.6
18gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
19gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, co... 40 5.6
20gb|AC132352.3| Mus musculus BAC clone RP24-97D9 from chromosome ... 40 5.6
21gb|AC134559.5| Mus musculus BAC clone RP24-332C4 from chromosome... 40 5.6
22ref|XM_548277.2| PREDICTED: Canis familiaris similar to cytokine... 40 5.6
23gb|AC125181.4| Mus musculus BAC clone RP23-324L6 from chromosome... 40 5.6
24gb|BC041255.1| Xenopus laevis hypothetical protein MGC52807, mRN... 40 5.6
25emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chr... 40 5.6
26emb|AL391474.8| Human DNA sequence from clone RP13-115H14 on chr... 40 5.6
27gb|AY096708.1| Arabidopsis thaliana unknown protein (At4g00990) ... 40 5.6
28gb|AY072204.1| Arabidopsis thaliana unknown protein (At4g00990) ... 40 5.6
29emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 5.6
30emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, c... 40 5.6
31emb|AL080237.1|ATF3I3 Arabidopsis thaliana DNA chromosome 4, BAC... 40 5.6
32emb|CR932801.1| Mus musculus chromosome 2, clone RPCI-21-331C08 ... 40 5.6
33emb|CR361561.8| Zebrafish DNA sequence from clone CH211-218K8 in... 40 5.6
34gb|AC092749.1| Genomic sequence for Oryza sativa (japonica culti... 40 5.6
35dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
36dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
37emb|BX827522.1|CNS0A48W Arabidopsis thaliana Full-length cDNA Co... 40 5.6
38gb|AC093675.4| Homo sapiens BAC clone RP11-592G13 from 2, comple... 40 5.6
39dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
40gb|AC112975.14| Mus musculus chromosome 1, clone RP24-468G12, co... 40 5.6
41gb|AC153957.4| Mus musculus 10 BAC RP24-502B21 (Roswell Park Can... 40 5.6
42gb|AC159104.2| Mus musculus BAC clone RP23-246E2 from chromosome... 40 5.6
43dbj|AB079539.1| Cottus kazika IGF-I mRNA for insulin-like growth... 40 5.6
44gb|U47813.1|DIU47813 Dirofilaria immitis cyclophilin Dicyp-2 mRN... 40 5.6
45gb|U47811.1|BMU47811 Brugia malayi cyclophilin Bmcyp-2 mRNA, com... 40 5.6
46gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
47emb|AL928572.5| Mouse DNA sequence from clone RP23-333P17 on chr... 40 5.6
48emb|AL731789.9| Mouse DNA sequence from clone RP23-52F6 on chrom... 40 5.6

>ref|XM_450893.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1290

 Score =  329 bits (166), Expect = 4e-87
 Identities = 271/306 (88%)
 Strand = Plus / Plus

                                                                       
Query: 4   atggcccgaaatgcttaaattgaaagactggcctacttcaaatcattttgaagagctttt 63
           |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 288 atggcctgaaatgcttaaattgaaggactggcctacatcaaatcattttgaagagctttt 347

                                                                       
Query: 64  gccttcgcatggagtggaatacatcaattctttaccctttcaaccgtacacaaatttgaa 123
           |||||| ||||||||  ||||||| ||||||||||| |||||||| |||||||| |||||
Sbjct: 348 gccttcccatggagttaaatacatgaattctttaccttttcaaccatacacaaacttgaa 407

                                                                       
Query: 124 atctggtttgctaagtgtttccgcattgcttcccgatgacattctaaagatcgacatggg 183
            ||||||||||| | ||| ||  | |||||||| ||||||||  ||||| | ||||||||
Sbjct: 408 gtctggtttgctgaatgtctcaaccttgcttcctgatgacatcttaaagcttgacatggg 467

                                                                       
Query: 184 cccgaagtcatacatagcttatggctatgcacaggaacttggcagaggagattctgttac 243
           ||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 468 cccaaaatcatatatagcttatggctatgcacaggaacttggtagaggagattctgttac 527

                                                                       
Query: 244 gaagcttcattgtgatatatctgacgcagttaacgttttgatgcatactgcacaagttgc 303
            |||||||| || ||| | ||||| ||||||||||||||||||||||||||  |||||| 
Sbjct: 528 aaagcttcactgcgatttgtctgatgcagttaacgttttgatgcatactgctgaagttga 587

                 
Query: 304 cccttc 309
           ||||||
Sbjct: 588 cccttc 593



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>dbj|AK059445.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A06, full
           insert sequence
          Length = 1290

 Score =  329 bits (166), Expect = 4e-87
 Identities = 271/306 (88%)
 Strand = Plus / Plus

                                                                       
Query: 4   atggcccgaaatgcttaaattgaaagactggcctacttcaaatcattttgaagagctttt 63
           |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 288 atggcctgaaatgcttaaattgaaggactggcctacatcaaatcattttgaagagctttt 347

                                                                       
Query: 64  gccttcgcatggagtggaatacatcaattctttaccctttcaaccgtacacaaatttgaa 123
           |||||| ||||||||  ||||||| ||||||||||| |||||||| |||||||| |||||
Sbjct: 348 gccttcccatggagttaaatacatgaattctttaccttttcaaccatacacaaacttgaa 407

                                                                       
Query: 124 atctggtttgctaagtgtttccgcattgcttcccgatgacattctaaagatcgacatggg 183
            ||||||||||| | ||| ||  | |||||||| ||||||||  ||||| | ||||||||
Sbjct: 408 gtctggtttgctgaatgtctcaaccttgcttcctgatgacatcttaaagcttgacatggg 467

                                                                       
Query: 184 cccgaagtcatacatagcttatggctatgcacaggaacttggcagaggagattctgttac 243
           ||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 468 cccaaaatcatatatagcttatggctatgcacaggaacttggtagaggagattctgttac 527

                                                                       
Query: 244 gaagcttcattgtgatatatctgacgcagttaacgttttgatgcatactgcacaagttgc 303
            |||||||| || ||| | ||||| ||||||||||||||||||||||||||  |||||| 
Sbjct: 528 aaagcttcactgcgatttgtctgatgcagttaacgttttgatgcatactgctgaagttga 587

                 
Query: 304 cccttc 309
           ||||||
Sbjct: 588 cccttc 593



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  281 bits (142), Expect = 9e-73
 Identities = 238/270 (88%)
 Strand = Plus / Plus

                                                                            
Query: 4        atggcccgaaatgcttaaattgaaagactggcctacttcaaatcattttgaagagctttt 63
                |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 13542845 atggcctgaaatgcttaaattgaaggactggcctacatcaaatcattttgaagagctttt 13542904

                                                                            
Query: 64       gccttcgcatggagtggaatacatcaattctttaccctttcaaccgtacacaaatttgaa 123
                |||||| ||||||||  ||||||| ||||||||||| |||||||| |||||||| |||||
Sbjct: 13542905 gccttcccatggagttaaatacatgaattctttaccttttcaaccatacacaaacttgaa 13542964

                                                                            
Query: 124      atctggtttgctaagtgtttccgcattgcttcccgatgacattctaaagatcgacatggg 183
                 ||||||||||| | ||| ||  | |||||||| ||||||||  ||||| | ||||||||
Sbjct: 13542965 gtctggtttgctgaatgtctcaaccttgcttcctgatgacatcttaaagcttgacatggg 13543024

                                                                            
Query: 184      cccgaagtcatacatagcttatggctatgcacaggaacttggcagaggagattctgttac 243
                ||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 13543025 cccaaaatcatatatagcttatggctatgcacaggaacttggtagaggagattctgttac 13543084

                                              
Query: 244      gaagcttcattgtgatatatctgacgcagt 273
                 |||||||| || ||| | ||||| |||||
Sbjct: 13543085 aaagcttcactgcgatttgtctgatgcagt 13543114



 Score =  250 bits (126), Expect = 3e-63
 Identities = 234/270 (86%)
 Strand = Plus / Plus

                                                                            
Query: 4        atggcccgaaatgcttaaattgaaagactggcctacttcaaatcattttgaagagctttt 63
                |||||| ||||||||||||||||| |||||||||| |||||| |||||||||||||||||
Sbjct: 13299249 atggcctgaaatgcttaaattgaatgactggcctatttcaaaccattttgaagagctttt 13299308

                                                                            
Query: 64       gccttcgcatggagtggaatacatcaattctttaccctttcaaccgtacacaaatttgaa 123
                |||||| ||||||||  |||||||||||||||| || |||||| | |||||||| |||||
Sbjct: 13299309 gccttctcatggagttaaatacatcaattctttgccttttcaagcatacacaaacttgaa 13299368

                                                                            
Query: 124      atctggtttgctaagtgtttccgcattgcttcccgatgacattctaaagatcgacatggg 183
                 ||||||||||| | ||| ||  |||||||||| ||||||||  ||||| | ||||||||
Sbjct: 13299369 gtctggtttgctgaatgtctcaacattgcttcctgatgacatcttaaagcttgacatggg 13299428

                                                                            
Query: 184      cccgaagtcatacatagcttatggctatgcacaggaacttggcagaggagattctgttac 243
                 || || ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 13299429 accaaaatcatatatagcttatggctatgcacaggagcttggtagaggagattctgttac 13299488

                                              
Query: 244      gaagcttcattgtgatatatctgacgcagt 273
                 || ||||| || ||| | ||||| |||||
Sbjct: 13299489 aaaacttcactgcgatttgtctgatgcagt 13299518



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                            
Query: 272      gttaacgttttgatgcatactgcacaagttgccccttctaaaggacaagaaaatgcaata 331
                |||||||||||||||||||||||  |||||  ||||||| | | ||||  ||| ||||||
Sbjct: 13299847 gttaacgttttgatgcatactgccgaagttaacccttctgaggaacaaataaacgcaata 13299906

                                     
Query: 332      aaaaacttgaaagcaagacat 352
                |||| |||||||  |||||||
Sbjct: 13299907 aaaagcttgaaaagaagacat 13299927



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 272      gttaacgttttgatgcatactgcacaagttgccccttc 309
                |||||||||||||||||||||||  |||||| ||||||
Sbjct: 13543442 gttaacgttttgatgcatactgctgaagttgacccttc 13543479



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>dbj|AP006562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1175F05
          Length = 126842

 Score =  281 bits (142), Expect = 9e-73
 Identities = 238/270 (88%)
 Strand = Plus / Plus

                                                                          
Query: 4      atggcccgaaatgcttaaattgaaagactggcctacttcaaatcattttgaagagctttt 63
              |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 117773 atggcctgaaatgcttaaattgaaggactggcctacatcaaatcattttgaagagctttt 117832

                                                                          
Query: 64     gccttcgcatggagtggaatacatcaattctttaccctttcaaccgtacacaaatttgaa 123
              |||||| ||||||||  ||||||| ||||||||||| |||||||| |||||||| |||||
Sbjct: 117833 gccttcccatggagttaaatacatgaattctttaccttttcaaccatacacaaacttgaa 117892

                                                                          
Query: 124    atctggtttgctaagtgtttccgcattgcttcccgatgacattctaaagatcgacatggg 183
               ||||||||||| | ||| ||  | |||||||| ||||||||  ||||| | ||||||||
Sbjct: 117893 gtctggtttgctgaatgtctcaaccttgcttcctgatgacatcttaaagcttgacatggg 117952

                                                                          
Query: 184    cccgaagtcatacatagcttatggctatgcacaggaacttggcagaggagattctgttac 243
              ||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 117953 cccaaaatcatatatagcttatggctatgcacaggaacttggtagaggagattctgttac 118012

                                            
Query: 244    gaagcttcattgtgatatatctgacgcagt 273
               |||||||| || ||| | ||||| |||||
Sbjct: 118013 aaagcttcactgcgatttgtctgatgcagt 118042



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                    
Query: 272    gttaacgttttgatgcatactgcacaagttgccccttc 309
              |||||||||||||||||||||||  |||||| ||||||
Sbjct: 118370 gttaacgttttgatgcatactgctgaagttgacccttc 118407



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>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0055N01
          Length = 154783

 Score =  250 bits (126), Expect = 3e-63
 Identities = 234/270 (86%)
 Strand = Plus / Plus

                                                                          
Query: 4      atggcccgaaatgcttaaattgaaagactggcctacttcaaatcattttgaagagctttt 63
              |||||| ||||||||||||||||| |||||||||| |||||| |||||||||||||||||
Sbjct: 120683 atggcctgaaatgcttaaattgaatgactggcctatttcaaaccattttgaagagctttt 120742

                                                                          
Query: 64     gccttcgcatggagtggaatacatcaattctttaccctttcaaccgtacacaaatttgaa 123
              |||||| ||||||||  |||||||||||||||| || |||||| | |||||||| |||||
Sbjct: 120743 gccttctcatggagttaaatacatcaattctttgccttttcaagcatacacaaacttgaa 120802

                                                                          
Query: 124    atctggtttgctaagtgtttccgcattgcttcccgatgacattctaaagatcgacatggg 183
               ||||||||||| | ||| ||  |||||||||| ||||||||  ||||| | ||||||||
Sbjct: 120803 gtctggtttgctgaatgtctcaacattgcttcctgatgacatcttaaagcttgacatggg 120862

                                                                          
Query: 184    cccgaagtcatacatagcttatggctatgcacaggaacttggcagaggagattctgttac 243
               || || ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 120863 accaaaatcatatatagcttatggctatgcacaggagcttggtagaggagattctgttac 120922

                                            
Query: 244    gaagcttcattgtgatatatctgacgcagt 273
               || ||||| || ||| | ||||| |||||
Sbjct: 120923 aaaacttcactgcgatttgtctgatgcagt 120952



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                          
Query: 272    gttaacgttttgatgcatactgcacaagttgccccttctaaaggacaagaaaatgcaata 331
              |||||||||||||||||||||||  |||||  ||||||| | | ||||  ||| ||||||
Sbjct: 121281 gttaacgttttgatgcatactgccgaagttaacccttctgaggaacaaataaacgcaata 121340

                                   
Query: 332    aaaaacttgaaagcaagacat 352
              |||| |||||||  |||||||
Sbjct: 121341 aaaagcttgaaaagaagacat 121361



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>gb|BT014596.1| Lycopersicon esculentum clone 134071R, mRNA sequence
          Length = 3007

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                        
Query: 230  ggagattctgttacgaagcttcattgtgatatatctgacgcagttaacgttttgatgcat 289
            |||||||| ||||| ||||||||||||||||| ||||| || || ||  |||| ||||||
Sbjct: 1927 ggagattccgttacaaagcttcattgtgatatgtctgatgcggtgaatattttaatgcat 1986

                 
Query: 290  actgc 294
            |||||
Sbjct: 1987 actgc 1991



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>gb|AC157490.18| Medicago truncatula clone mth2-123f23, complete sequence
          Length = 106571

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 215 caggaacttggcagaggagattctgttacgaagcttcattgtgatatatctgacgcagt 273
           |||||||||||  | || |||||||| || ||||||||||||||||| ||||| |||||
Sbjct: 810 caggaacttgggcggggtgattctgtgactaagcttcattgtgatatgtctgatgcagt 868



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>gb|AF003134.3| Caenorhabditis elegans cosmid ZC581, complete sequence
          Length = 38880

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 321  aaaatgcaataaaaaacttgaaa 343
            |||||||||||||||||||||||
Sbjct: 7070 aaaatgcaataaaaaacttgaaa 7092



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>ref|XM_697108.1| PREDICTED: Danio rerio hypothetical protein LOC554486 (LOC554486),
            mRNA
          Length = 2666

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 226  cagaggagattctgttacgaa 246
            |||||||||||||||||||||
Sbjct: 1392 cagaggagattctgttacgaa 1412



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>gb|AY921028.1| Acipenser sinensis microsatellite AS-033 sequence
          Length = 307

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 317 caagaaaatgcaataaaaaacttga 341
           |||||||||||||||||||| ||||
Sbjct: 267 caagaaaatgcaataaaaaaattga 291



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>gb|BC045478.1| Danio rerio, clone IMAGE:3818440, mRNA
          Length = 3273

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 226  cagaggagattctgttacgaa 246
            |||||||||||||||||||||
Sbjct: 2086 cagaggagattctgttacgaa 2106



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>gb|BC057467.1| Danio rerio ribosomal protein S6 kinase, like, mRNA (cDNA clone
            MGC:66139 IMAGE:3818026), complete cds
          Length = 3272

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 226  cagaggagattctgttacgaa 246
            |||||||||||||||||||||
Sbjct: 1981 cagaggagattctgttacgaa 2001



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>emb|CT571256.7| Mouse DNA sequence from clone RP24-135B13 on chromosome 13, complete
             sequence
          Length = 183340

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 320   gaaaatgcaataaaaaacttg 340
             |||||||||||||||||||||
Sbjct: 88559 gaaaatgcaataaaaaacttg 88579



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>ref|NM_200073.1| Danio rerio ribosomal protein S6 kinase, like (rps6kal), mRNA
          Length = 3272

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 226  cagaggagattctgttacgaa 246
            |||||||||||||||||||||
Sbjct: 1981 cagaggagattctgttacgaa 2001



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>emb|AL935057.7| Mouse DNA sequence from clone RP23-90D6 on chromosome 2, complete
             sequence
          Length = 148247

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 329   ataaaaaacttgaaagcaaga 349
             |||||||||||||||||||||
Sbjct: 38753 ataaaaaacttgaaagcaaga 38773



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>ref|NM_116327.4| Arabidopsis thaliana transcription factor AT4G00990 mRNA, complete
            cds
          Length = 2804

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 227  agaggagattctgttacgaagcttcattgtgatatatctgacgc 270
            ||||||||||| || || || ||||||||||| || ||||||||
Sbjct: 1703 agaggagattcggtgacaaaacttcattgtgacatttctgacgc 1746



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>gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, complete sequence
          Length = 257924

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    tacacaaatttgaaatctgg 129
              ||||||||||||||||||||
Sbjct: 194568 tacacaaatttgaaatctgg 194587



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>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0023M11, complete sequence
          Length = 120228

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 259   tatatctgacgcagttaacgtttt 282
             |||||||||||| |||||||||||
Sbjct: 57658 tatatctgacgctgttaacgtttt 57681



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>gb|AC122117.10| Mus musculus chromosome 18, clone RP23-61O22, complete sequence
          Length = 207024

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    agcttttgccttcgcatgga 76
             ||||||||||||||||||||
Sbjct: 72600 agcttttgccttcgcatgga 72619



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>gb|AC132352.3| Mus musculus BAC clone RP24-97D9 from chromosome 6, complete sequence
          Length = 168117

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   atagcttatggctatgcaca 216
             ||||||||||||||||||||
Sbjct: 23933 atagcttatggctatgcaca 23952



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>gb|AC134559.5| Mus musculus BAC clone RP24-332C4 from chromosome 8, complete sequence
          Length = 180692

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 374    tgttgtggcaatttttcaattgat 397
              |||||||| |||||||||||||||
Sbjct: 138237 tgttgtggtaatttttcaattgat 138214



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>ref|XM_548277.2| PREDICTED: Canis familiaris similar to cytokine receptor-like factor
            3 (LOC491157), mRNA
          Length = 2912

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   acttcaaatcattttgaaga 57
            ||||||||||||||||||||
Sbjct: 1042 acttcaaatcattttgaaga 1061



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>gb|AC125181.4| Mus musculus BAC clone RP23-324L6 from chromosome 8, complete sequence
          Length = 223306

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 374   tgttgtggcaatttttcaattgat 397
             |||||||| |||||||||||||||
Sbjct: 15727 tgttgtggtaatttttcaattgat 15704



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>gb|BC041255.1| Xenopus laevis hypothetical protein MGC52807, mRNA (cDNA clone
           MGC:52807 IMAGE:4724919), complete cds
          Length = 1976

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 346 aagacatgagggacaagatgaaaa 369
           |||||||| |||||||||||||||
Sbjct: 95  aagacatgcgggacaagatgaaaa 118



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>emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chromosome 1 Contains the 3'
              end of the KCNN3 gene for potassium intermediate/small
              conductance calcium-activated channel, subfamily N, member
              3, a novel gene and the 5' end of the ADAR gene for
              adenosine deaminase, RNA-specific, complete sequence
          Length = 173014

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                          
Query: 347    agacatgagggacaagatgaaaaggaat 374
              ||||||||||| ||||||||||||||||
Sbjct: 110090 agacatgaggg-caagatgaaaaggaat 110116



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>emb|AL391474.8| Human DNA sequence from clone RP13-115H14 on chromosome X Contains the
             5' end of the gene for novel protein similar to
             rab11-binding protein (DKFZp686L20145) and a CpG island,
             complete sequence
          Length = 49018

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   agaaaatgcaataaaaaact 338
             ||||||||||||||||||||
Sbjct: 18560 agaaaatgcaataaaaaact 18579



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>gb|AY096708.1| Arabidopsis thaliana unknown protein (At4g00990) mRNA, complete cds
          Length = 2554

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 227  agaggagattctgttacgaagcttcattgtgatatatctgacgc 270
            ||||||||||| || || || ||||||||||| || ||||||||
Sbjct: 1612 agaggagattcggtgacaaaacttcattgtgacatttctgacgc 1655



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>gb|AY072204.1| Arabidopsis thaliana unknown protein (At4g00990) mRNA, complete cds
          Length = 2785

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 227  agaggagattctgttacgaagcttcattgtgatatatctgacgc 270
            ||||||||||| || || || ||||||||||| || ||||||||
Sbjct: 1705 agaggagattcggtgacaaaacttcattgtgacatttctgacgc 1748



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>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    atgacattctaaagatcgac 178
              ||||||||||||||||||||
Sbjct: 969709 atgacattctaaagatcgac 969690



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>emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 3
          Length = 196149

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 227   agaggagattctgttacgaagcttcattgtgatatatctgacgc 270
             ||||||||||| || || || ||||||||||| || ||||||||
Sbjct: 43615 agaggagattcggtgacaaaacttcattgtgacatttctgacgc 43658



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>emb|AL080237.1|ATF3I3 Arabidopsis thaliana DNA chromosome 4, BAC clone F3I3, partial
            sequence (ESSA project)
          Length = 22145

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 227  agaggagattctgttacgaagcttcattgtgatatatctgacgc 270
            ||||||||||| || || || ||||||||||| || ||||||||
Sbjct: 2155 agaggagattcggtgacaaaacttcattgtgacatttctgacgc 2198



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>emb|CR932801.1| Mus musculus chromosome 2, clone RPCI-21-331C08 strain 129/Sv, complete
             sequence
          Length = 107646

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 311   aaaggacaagaaaatgcaataaaa 334
             ||||||||||| ||||||||||||
Sbjct: 91000 aaaggacaagataatgcaataaaa 90977



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>emb|CR361561.8| Zebrafish DNA sequence from clone CH211-218K8 in linkage group 25,
             complete sequence
          Length = 200274

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 320   gaaaatgcaataaaaaacttgaaa 343
             ||||||||||||||||| ||||||
Sbjct: 46755 gaaaatgcaataaaaaatttgaaa 46732



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>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
              Nipponbare clone OSJNBb0023M11, from chromosome 10,
              complete sequence
          Length = 138668

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 259    tatatctgacgcagttaacgtttt 282
              |||||||||||| |||||||||||
Sbjct: 136326 tatatctgacgctgttaacgtttt 136349



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 259      tatatctgacgcagttaacgtttt 282
                |||||||||||| |||||||||||
Sbjct: 10216105 tatatctgacgctgttaacgtttt 10216128



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 111      acacaaatttgaaatctggt 130
                ||||||||||||||||||||
Sbjct: 10628056 acacaaatttgaaatctggt 10628037



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>emb|BX827522.1|CNS0A48W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS69ZH07 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2667

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 227  agaggagattctgttacgaagcttcattgtgatatatctgacgc 270
            ||||||||||| || || || ||||||||||| || ||||||||
Sbjct: 1649 agaggagattcggtgacaaaacttcattgtgacatttctgacgc 1692



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>gb|AC093675.4| Homo sapiens BAC clone RP11-592G13 from 2, complete sequence
          Length = 123182

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 325   tgcaataaaaaacttgaaagcaagacat 352
             ||||||||||||||| ||| ||||||||
Sbjct: 32736 tgcaataaaaaacttaaaatcaagacat 32709



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>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0018M09
          Length = 157377

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   acacaaatttgaaatctggt 130
             ||||||||||||||||||||
Sbjct: 45746 acacaaatttgaaatctggt 45727



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>gb|AC112975.14| Mus musculus chromosome 1, clone RP24-468G12, complete sequence
          Length = 175974

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   gagggacaagatgaaaagga 372
             ||||||||||||||||||||
Sbjct: 75725 gagggacaagatgaaaagga 75744



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>gb|AC153957.4| Mus musculus 10 BAC RP24-502B21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 182105

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 35     cctacttcaaatcattttgaagagcttt 62
              |||||||||||| ||||| |||||||||
Sbjct: 135738 cctacttcaaattattttcaagagcttt 135765



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>gb|AC159104.2| Mus musculus BAC clone RP23-246E2 from chromosome 13, complete sequence
          Length = 203694

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    gacaagaaaatgcaataaaa 334
              ||||||||||||||||||||
Sbjct: 138616 gacaagaaaatgcaataaaa 138597



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>dbj|AB079539.1| Cottus kazika IGF-I mRNA for insulin-like growth factor I, complete
           cds
          Length = 1500

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 44  aatcattttgaagagctttt 63
           ||||||||||||||||||||
Sbjct: 901 aatcattttgaagagctttt 882



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>gb|U47813.1|DIU47813 Dirofilaria immitis cyclophilin Dicyp-2 mRNA, complete cds
          Length = 666

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 390 caattgatggaagtaatgca 409
           ||||||||||||||||||||
Sbjct: 60  caattgatggaagtaatgca 79



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>gb|U47811.1|BMU47811 Brugia malayi cyclophilin Bmcyp-2 mRNA, complete cds
          Length = 700

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 390 caattgatggaagtaatgca 409
           ||||||||||||||||||||
Sbjct: 60  caattgatggaagtaatgca 79



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 259      tatatctgacgcagttaacgtttt 282
                |||||||||||| |||||||||||
Sbjct: 10222144 tatatctgacgctgttaacgtttt 10222167



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>emb|AL928572.5| Mouse DNA sequence from clone RP23-333P17 on chromosome 2, complete
             sequence
          Length = 154074

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 311   aaaggacaagaaaatgcaataaaa 334
             ||||||||||| ||||||||||||
Sbjct: 79608 aaaggacaagataatgcaataaaa 79585



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>emb|AL731789.9| Mouse DNA sequence from clone RP23-52F6 on chromosome X, complete
              sequence
          Length = 218939

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    agaaaatgcaataaaaaact 338
              ||||||||||||||||||||
Sbjct: 167634 agaaaatgcaataaaaaact 167653


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,221,176
Number of Sequences: 3902068
Number of extensions: 4221176
Number of successful extensions: 100847
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 100615
Number of HSP's gapped (non-prelim): 233
length of query: 417
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 395
effective length of database: 17,147,199,772
effective search space: 6773143909940
effective search space used: 6773143909940
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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