>gb|BT016705.1| Zea mays clone Contig538 mRNA sequence
          Length = 1265

 Score = 50.1 bits (25), Expect = 2e-04
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 9   ccctggtgggcacgatgcgcggcca 33
           |||||||||||||||||||||||||
Sbjct: 92  ccctggtgggcacgatgcgcggcca 116

>gb|BT016269.1| Zea mays clone Contig102 mRNA sequence
          Length = 1254

 Score = 48.1 bits (24), Expect = 8e-04
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 11  ctggtgggcacgatgcgcggccac 34
           ||||||||||||||||||||||||
Sbjct: 94  ctggtgggcacgatgcgcggccac 117

>gb|AY103919.1| Zea mays PCO099246 mRNA sequence
          Length = 1461

 Score = 48.1 bits (24), Expect = 8e-04
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 11  ctggtgggcacgatgcgcggccac 34
           ||||||||||||||||||||||||
Sbjct: 251 ctggtgggcacgatgcgcggccac 274

>gb|BT017990.1| Zea mays clone EL01N0526B03.c mRNA sequence
          Length = 1281

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 11  ctggtgggcacgatgcgcggccac 34
           ||||||||||||||| ||||||||
Sbjct: 103 ctggtgggcacgatgtgcggccac 126

>emb|X02724.1|SSUPAR Porcine mRNA for plasminogen activator
          Length = 2375

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gtcgctcaccctggtgggca 20
            ||||||||||||||||||||
Sbjct: 1596 gtcgctcaccctggtgggca 1577

>emb|X01648.1|SSUPAG Porcine gene for plasminogen activator
          Length = 7143

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gtcgctcaccctggtgggca 20
            ||||||||||||||||||||
Sbjct: 6047 gtcgctcaccctggtgggca 6028

>ref|NM_213945.1| Sus scrofa plasminogen activator (PLAU), mRNA
          Length = 2375

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    gtcgctcaccctggtgggca 20
            ||||||||||||||||||||
Sbjct: 1596 gtcgctcaccctggtgggca 1577

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 38.2 bits (19), Expect = 0.78
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 13      ggtgggcacgatgcgcggc 31
               |||||||||||||||||||
Sbjct: 3895996 ggtgggcacgatgcgcggc 3895978

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 38.2 bits (19), Expect = 0.78
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 13      ggtgggcacgatgcgcggc 31
               |||||||||||||||||||
Sbjct: 3637814 ggtgggcacgatgcgcggc 3637796

>emb|AL662916.8| Mouse DNA sequence from clone RP23-442C24 on chromosome 11, complete
             sequence
          Length = 25524

 Score = 38.2 bits (19), Expect = 0.78
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 8     accctggtgggcacgatgc 26
             |||||||||||||||||||
Sbjct: 19172 accctggtgggcacgatgc 19190

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 38.2 bits (19), Expect = 0.78
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 13     ggtgggcacgatgcgcggc 31
              |||||||||||||||||||
Sbjct: 546054 ggtgggcacgatgcgcggc 546072



 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 15      tgggcacgatgcgcggcc 32
               ||||||||||||||||||
Sbjct: 1896652 tgggcacgatgcgcggcc 1896635

>ref|NM_008873.2| Mus musculus plasminogen activator, urokinase (Plau), mRNA
          Length = 2299

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 3    cgctcaccctggtgggca 20
            ||||||||||||||||||
Sbjct: 1510 cgctcaccctggtgggca 1493

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 15      tgggcacgatgcgcggcc 32
               ||||||||||||||||||
Sbjct: 1031869 tgggcacgatgcgcggcc 1031852

>gb|AC121599.3| Mus musculus BAC clone RP23-300H21 from 14, complete sequence
          Length = 218747

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 3      cgctcaccctggtgggca 20
              ||||||||||||||||||
Sbjct: 213185 cgctcaccctggtgggca 213168

>emb|X02389.1|MMURKR Mouse mRNA for urokinase
          Length = 2299

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 3    cgctcaccctggtgggca 20
            ||||||||||||||||||
Sbjct: 1510 cgctcaccctggtgggca 1493

>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 15    tgggcacgatgcgcggcc 32
             ||||||||||||||||||
Sbjct: 59137 tgggcacgatgcgcggcc 59120

>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 15     tgggcacgatgcgcggcc 32
              ||||||||||||||||||
Sbjct: 341897 tgggcacgatgcgcggcc 341880

>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 15     tgggcacgatgcgcggcc 32
              ||||||||||||||||||
Sbjct: 136794 tgggcacgatgcgcggcc 136811

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 15      tgggcacgatgcgcggcc 32
               ||||||||||||||||||
Sbjct: 2349397 tgggcacgatgcgcggcc 2349380

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 9       ccctggtgggcacgatgcgcgg 30
               |||||||||||||| |||||||
Sbjct: 2004705 ccctggtgggcacggtgcgcgg 2004726

>gb|AC154840.2| Mus musculus BAC clone RP23-61I7 from chromosome 14, complete sequence
          Length = 195596

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 3     cgctcaccctggtgggca 20
             ||||||||||||||||||
Sbjct: 99407 cgctcaccctggtgggca 99424

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 13      ggtgggcacgatgcgcgg 30
               ||||||||||||||||||
Sbjct: 1832801 ggtgggcacgatgcgcgg 1832784

>gb|U47738.1|STU47738 Solanum tuberosum chalcone synthase 2 mRNA, complete cds
          Length = 1404

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 2    tcgctcaccctggtgggc 19
            ||||||||||||||||||
Sbjct: 1004 tcgctcaccctggtgggc 1021

>gb|M17922.1|MUSUPAA Mouse Murine urokinase-type plasminogen activator protein gene,
            complete cds
          Length = 9950

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 3    cgctcaccctggtgggca 20
            ||||||||||||||||||
Sbjct: 8116 cgctcaccctggtgggca 8099


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 124,640
Number of Sequences: 3902068
Number of extensions: 124640
Number of successful extensions: 29467
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28842
Number of HSP's gapped (non-prelim): 625
length of query: 34
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 14
effective length of database: 17,155,003,908
effective search space: 240170054712
effective search space used: 240170054712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)