>ref|XM_450158.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1243

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 86/99 (86%), Gaps = 2/99 (2%)
 Strand = Plus / Plus

                                                                       
Query: 157 ggcccggcgcttcccgtcgctgcgggccgcgcggc-gcgtcgtcacggcgcgggcggttc 215
           ||||| ||| |||||| |||||||||||||||  | ||| | | ||||||||||||||  
Sbjct: 172 ggccccgcggttcccgacgctgcgggccgcgccacggcggc-tgacggcgcgggcggtgg 230

                                                  
Query: 216 ccgtggacgccgacgacgagtgggggaaggagccggcgg 254
           ||| ||||||||| |||||||||||||||||||||||||
Sbjct: 231 ccggggacgccgaggacgagtgggggaaggagccggcgg 269

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 86/99 (86%), Gaps = 2/99 (2%)
 Strand = Plus / Plus

                                                                           
Query: 157     ggcccggcgcttcccgtcgctgcgggccgcgcggc-gcgtcgtcacggcgcgggcggttc 215
               ||||| ||| |||||| |||||||||||||||  | ||| | | ||||||||||||||  
Sbjct: 2495974 ggccccgcggttcccgacgctgcgggccgcgccacggcggc-tgacggcgcgggcggtgg 2496032

                                                      
Query: 216     ccgtggacgccgacgacgagtgggggaaggagccggcgg 254
               ||| ||||||||| |||||||||||||||||||||||||
Sbjct: 2496033 ccggggacgccgaggacgagtgggggaaggagccggcgg 2496071

>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0406E03
          Length = 201069

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 86/99 (86%), Gaps = 2/99 (2%)
 Strand = Plus / Plus

                                                                         
Query: 157   ggcccggcgcttcccgtcgctgcgggccgcgcggc-gcgtcgtcacggcgcgggcggttc 215
             ||||| ||| |||||| |||||||||||||||  | ||| | | ||||||||||||||  
Sbjct: 82564 ggccccgcggttcccgacgctgcgggccgcgccacggcggc-tgacggcgcgggcggtgg 82622

                                                    
Query: 216   ccgtggacgccgacgacgagtgggggaaggagccggcgg 254
             ||| ||||||||| |||||||||||||||||||||||||
Sbjct: 82623 ccggggacgccgaggacgagtgggggaaggagccggcgg 82661

>dbj|AK099394.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I12, full
           insert sequence
          Length = 1243

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 86/99 (86%), Gaps = 2/99 (2%)
 Strand = Plus / Plus

                                                                       
Query: 157 ggcccggcgcttcccgtcgctgcgggccgcgcggc-gcgtcgtcacggcgcgggcggttc 215
           ||||| ||| |||||| |||||||||||||||  | ||| | | ||||||||||||||  
Sbjct: 172 ggccccgcggttcccgacgctgcgggccgcgccacggcggc-tgacggcgcgggcggtgg 230

                                                  
Query: 216 ccgtggacgccgacgacgagtgggggaaggagccggcgg 254
           ||| ||||||||| |||||||||||||||||||||||||
Sbjct: 231 ccggggacgccgaggacgagtgggggaaggagccggcgg 269

>gb|AY224474.1| Oryza sativa (japonica cultivar-group) isolate 29042 fibrillin-like
           protein mRNA, complete cds
          Length = 960

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 85/99 (85%), Gaps = 2/99 (2%)
 Strand = Plus / Plus

                                                                       
Query: 157 ggcccggcgcttcccgtcgctgcgggccgcgcggc-gcgtcgtcacggcgcgggcggttc 215
           ||||| ||| |||||| |||||||||||||||  | ||| | | ||||||||||||||  
Sbjct: 111 ggccccgcggttcccgacgctgcgggccgcgccacggcggc-tgacggcgcgggcggtgg 169

                                                  
Query: 216 ccgtggacgccgacgacgagtgggggaaggagccggcgg 254
           ||| ||||||||| ||||||| |||||||||||||||||
Sbjct: 170 ccggggacgccgaggacgagtkggggaaggagccggcgg 208

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 174     cgctgcgggccgcgcggcgcgtcg 197
               ||||||||||||||||||||||||
Sbjct: 2710213 cgctgcgggccgcgcggcgcgtcg 2710190

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 147    tctccccggcggcccggcgctt 168
              ||||||||||||||||||||||
Sbjct: 253759 tctccccggcggcccggcgctt 253738

>emb|BX927154.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 7/10
          Length = 349575

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 202    ggcgcgggcggttcccgtggac 223
              ||||||||||||||||||||||
Sbjct: 300239 ggcgcgggcggttcccgtggac 300218

>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 202     ggcgcgggcggttcccgtggac 223
               ||||||||||||||||||||||
Sbjct: 2423540 ggcgcgggcggttcccgtggac 2423519

>gb|AC125137.3| Mus musculus BAC clone RP24-324K9 from chromosome 6, complete sequence
          Length = 170336

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 80     gccgtgtccctgtccgtgccgtcgc 104
              |||||||||||||||||||| ||||
Sbjct: 145104 gccgtgtccctgtccgtgccttcgc 145080

>emb|AJ421798.1|SCA421798 Streptomyces cattleya thienamycin gene cluster
          Length = 32329

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 174  cgctgcgggccgcgcggcgcg 194
            |||||||||||||||||||||
Sbjct: 4388 cgctgcgggccgcgcggcgcg 4408

>gb|AC155839.4| Mus musculus 6 BAC RP24-96J4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 173368

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 80    gccgtgtccctgtccgtgccgtcgc 104
             |||||||||||||||||||| ||||
Sbjct: 33706 gccgtgtccctgtccgtgccttcgc 33682

>gb|AE004537.1| Pseudomonas aeruginosa PAO1, section 98 of 529 of the complete genome
          Length = 13946

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 177  tgcgggccgcgcggcgcgtcg 197
            |||||||||||||||||||||
Sbjct: 6350 tgcgggccgcgcggcgcgtcg 6370

>ref|XM_469311.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3168

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 181 ggccgcgcggcgcgtcgtcacggc 204
           |||||||||||||||||| |||||
Sbjct: 199 ggccgcgcggcgcgtcgtgacggc 176

>ref|XM_479409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3127

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 216 ccgtggacgccgacgacgag 235
           ||||||||||||||||||||
Sbjct: 460 ccgtggacgccgacgacgag 441

>ref|XM_418264.1| PREDICTED: Gallus gallus similar to lung enriched kruppel like
           factor (LOC420148), mRNA
          Length = 1850

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 100 gtcgccccaggtaccgccgggggc 123
           |||||||||||| |||||||||||
Sbjct: 132 gtcgccccaggtgccgccgggggc 109

>ref|XM_867515.1| PREDICTED: Bos taurus hypothetical protein LOC615653 (LOC615653),
           partial mRNA
          Length = 891

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 121 ggcgtcctctgcccgcggccgcct 144
           |||| |||||||||||||||||||
Sbjct: 431 ggcgccctctgcccgcggccgcct 408

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 181      ggccgcgcggcgcgtcgtcacggc 204
                |||||||||||||||||| |||||
Sbjct: 26869900 ggccgcgcggcgcgtcgtgacggc 26869923

>emb|CR674167.2|CNS0FJ5P Tetraodon nigroviridis full-length cDNA
          Length = 1348

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 17  gaggaagaggagcacgagaaccga 40
           |||||||||||| |||||||||||
Sbjct: 693 gaggaagaggaggacgagaaccga 716

>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete
             sequence
          Length = 149303

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 181   ggccgcgcggcgcgtcgtcacggc 204
             |||||||||||||||||| |||||
Sbjct: 48900 ggccgcgcggcgcgtcgtgacggc 48923

>emb|BX063239.1|CNS09KYJ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC44DG11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 910

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 cgtggacgccgacgacgagt 236
           ||||||||||||||||||||
Sbjct: 442 cgtggacgccgacgacgagt 423

>emb|BX046265.1|CNS097V1 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC2DD07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 754

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 cgtggacgccgacgacgagt 236
           ||||||||||||||||||||
Sbjct: 423 cgtggacgccgacgacgagt 404

>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 205     gcgggcggttcccgtggacgccga 228
               |||| |||||||||||||||||||
Sbjct: 3383734 gcggacggttcccgtggacgccga 3383757

>dbj|AK134628.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
          enriched library, clone:6330504O21 product:similar to
          DJ423B22.1 (Novel protein similar to KIAA0323, KIAA0615
          and C.elegans C30F12.1) (Fragment) [Homo sapiens], full
          insert sequence
          Length = 1917

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 15 cagaggaagaggagcacgag 34
          ||||||||||||||||||||
Sbjct: 37 cagaggaagaggagcacgag 56

>ref|NM_001034907.1| Mus musculus RIKEN cDNA A130028J20 gene (A130028J20Rik), mRNA
          Length = 1917

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 15 cagaggaagaggagcacgag 34
          ||||||||||||||||||||
Sbjct: 37 cagaggaagaggagcacgag 56

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 216      ccgtggacgccgacgacgag 235
                ||||||||||||||||||||
Sbjct: 27703269 ccgtggacgccgacgacgag 27703288

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 181      ggccgcgcggcgcgtcgtcacggc 204
                |||||||||||||||||| |||||
Sbjct: 26961223 ggccgcgcggcgcgtcgtgacggc 26961246

>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1477_F01
          Length = 158792

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   ccgtggacgccgacgacgag 235
             ||||||||||||||||||||
Sbjct: 82371 ccgtggacgccgacgacgag 82390

>ref|XM_321589.2| Anopheles gambiae str. PEST ENSANGP00000011698
           (ENSANGG00000009209), partial mRNA
          Length = 1089

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 cgtggacgccgacgacgagt 236
           ||||||||||||||||||||
Sbjct: 261 cgtggacgccgacgacgagt 242

>dbj|AK071875.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038A02, full
           insert sequence
          Length = 3128

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 216 ccgtggacgccgacgacgag 235
           ||||||||||||||||||||
Sbjct: 460 ccgtggacgccgacgacgag 441

>gb|AF010496.1|AF010496 Rhodobacter capsulatus strain SB1003, partial genome
          Length = 189370

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    gcgtcgtcacggcgcgggcg 211
              ||||||||||||||||||||
Sbjct: 112275 gcgtcgtcacggcgcgggcg 112256

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     gtcgcagaggaagaggagca 30
              ||||||||||||||||||||
Sbjct: 340389 gtcgcagaggaagaggagca 340408

>emb|AL671982.4| Mouse DNA sequence from clone RP23-132H1 on chromosome X, complete
              sequence
          Length = 190627

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     cagaggaagaggagcacgag 34
              ||||||||||||||||||||
Sbjct: 142084 cagaggaagaggagcacgag 142103


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,670,983
Number of Sequences: 3902068
Number of extensions: 1670983
Number of successful extensions: 37674
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37239
Number of HSP's gapped (non-prelim): 435
length of query: 261
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 239
effective length of database: 17,147,199,772
effective search space: 4098180745508
effective search space used: 4098180745508
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)