>emb|X80265.1|HVSTRPR H.vulgare mRNA for putative structural protein
          Length = 733

 Score =  287 bits (145), Expect = 7e-75
 Identities = 148/149 (99%)
 Strand = Plus / Plus

                                                                       
Query: 66  caagaacactagttcaggagctagctatcgatggagaagtctaccaagatggtggcggtg 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   caagaacactagttcaggagctagctatcgatggagaagtctaccaagatggtggcggtg 60

                                                                       
Query: 126 ctcgtcctcgccgtgctggccgtggcaaccggcgccgaggcgaggaacatcaagacgacg 185
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctcgtcctcgccgtgctggccgcggcaaccggcgccgaggcgaggaacatcaagacgacg 120

                                        
Query: 186 gaggcggcagctgccagcaaggacgcggt 214
           |||||||||||||||||||||||||||||
Sbjct: 121 gaggcggcagctgccagcaaggacgcggt 149

>emb|X67324.1|ZMFS18 Z.mays MFS18 mRNA
          Length = 969

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 158 cgccgaggcgaggaacatcaagac 181
           ||||||||||||||||||||||||
Sbjct: 217 cgccgaggcgaggaacatcaagac 240

>gb|AY106835.1| Zea mays PCO070523 mRNA sequence
          Length = 727

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 158 cgccgaggcgaggaacatcaagacgacg 185
           ||||||||| ||||||||||||||||||
Sbjct: 144 cgccgaggcaaggaacatcaagacgacg 171

>gb|AY103988.1| Zea mays PCO070524 mRNA sequence
          Length = 1061

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 158 cgccgaggcgaggaacatcaagac 181
           ||||||||||||||||||||||||
Sbjct: 234 cgccgaggcgaggaacatcaagac 257

>gb|BT017349.1| Zea mays clone EL01N0323G05.c mRNA sequence
          Length = 773

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 161 cgaggcgaggaacatcaagac 181
           |||||||||||||||||||||
Sbjct: 64  cgaggcgaggaacatcaagac 84

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 128     cgtcctcgccgtgctggccgt 148
               |||||||||||||||||||||
Sbjct: 1741007 cgtcctcgccgtgctggccgt 1741027

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 130     tcctcgccgtgctggccgtgg 150
               |||||||||||||||||||||
Sbjct: 4941091 tcctcgccgtgctggccgtgg 4941111

>dbj|BS000073.1| Pan troglodytes chromosome 22 clone:RP43-040P11, map 22, complete
              sequences
          Length = 148593

 Score = 42.1 bits (21), Expect = 0.69
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 11     gagctagaagcaacaagcaag 31
              |||||||||||||||||||||
Sbjct: 101675 gagctagaagcaacaagcaag 101695

>ref|NM_187859.1| Oryza sativa (japonica cultivar-group), Ozsa8303 predicted mRNA
          Length = 366

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 162 gaggcgaggaacatcaagacgacggaggcggc 193
           |||||||||||||||||| || ||| ||||||
Sbjct: 67  gaggcgaggaacatcaaggcggcggcggcggc 98

>emb|AL139821.9| Human DNA sequence from clone RP11-80K21 on chromosome 10 Contains
            two novel genes including FLJ37439, the 5' end of a novel
            gene (KIAA1136) (FLJ37801) and a CpG island, complete
            sequence
          Length = 163680

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   caacaagcaagcaaagcaag 40
            ||||||||||||||||||||
Sbjct: 2577 caacaagcaagcaaagcaag 2558

>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    gtcctcgccgtgctggccgt 148
              ||||||||||||||||||||
Sbjct: 166670 gtcctcgccgtgctggccgt 166689

>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   gtcctcgccgtgctggccgt 148
             ||||||||||||||||||||
Sbjct: 79476 gtcctcgccgtgctggccgt 79495

>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16
          Length = 348580

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 120  gcggtgctcgtcctcgccgtgctg 143
            |||||||||| |||||||||||||
Sbjct: 4436 gcggtgctcggcctcgccgtgctg 4413

>emb|BX294141.1| Pirellula sp. strain 1 complete genome; segment 9/24
          Length = 299350

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     gcaacaagcaagcaaagcaa 39
              ||||||||||||||||||||
Sbjct: 299037 gcaacaagcaagcaaagcaa 299056

>gb|AC103585.2| Homo sapiens chromosome 3 clone RP11-48D9, complete sequence
          Length = 184596

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    acaagcaagcaaagcaagca 42
             ||||||||||||||||||||
Sbjct: 78503 acaagcaagcaaagcaagca 78522

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 24      caagcaagcaaagcaagcagccac 47
               |||||||||||||||||| |||||
Sbjct: 9921558 caagcaagcaaagcaagcggccac 9921535

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 25      aagcaagcaaagcaagcagc 44
               ||||||||||||||||||||
Sbjct: 4358159 aagcaagcaaagcaagcagc 4358178

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 162     gaggcgaggaacatcaagacgacggaggcggc 193
               |||||||||||||||||| || ||| ||||||
Sbjct: 8305410 gaggcgaggaacatcaaggcggcggcggcggc 8305379

>gb|AC008177.3| Homo sapiens BAC clone RP11-527A7 from 2, complete sequence
          Length = 152996

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    gccactcacacactagccag 62
             ||||||||||||||||||||
Sbjct: 14110 gccactcacacactagccag 14091

>gb|AC126471.4| Homo sapiens 12 BAC RP11-629O19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 199945

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    aagtctaccaagatggtggc 121
              ||||||||||||||||||||
Sbjct: 110034 aagtctaccaagatggtggc 110053

>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0434D08
          Length = 161266

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 162   gaggcgaggaacatcaagacgacggaggcggc 193
             |||||||||||||||||| || ||| ||||||
Sbjct: 99341 gaggcgaggaacatcaaggcggcggcggcggc 99310

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 132     ctcgccgtgctggccgtggc 151
               ||||||||||||||||||||
Sbjct: 3171507 ctcgccgtgctggccgtggc 3171526

>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1014_E09
          Length = 184624

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     aagcaagcaaagcaagcagc 44
              ||||||||||||||||||||
Sbjct: 179213 aagcaagcaaagcaagcagc 179232

>dbj|AK111310.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-C02, full
           insert sequence
          Length = 826

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 24  caagcaagcaaagcaagcagccac 47
           |||||||||||||||||| |||||
Sbjct: 152 caagcaagcaaagcaagcggccac 175

>emb|AJ324223.1|HSA324223 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-ZF16C
          Length = 761

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 115 tggtggcggtgctcgtcctc 134
           ||||||||||||||||||||
Sbjct: 107 tggtggcggtgctcgtcctc 126

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 24      caagcaagcaaagcaagcagccac 47
               |||||||||||||||||| |||||
Sbjct: 9921443 caagcaagcaaagcaagcggccac 9921420

>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 140806

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    caagcaagcaaagcaagcagccac 47
             |||||||||||||||||| |||||
Sbjct: 10912 caagcaagcaaagcaagcggccac 10935

>dbj|AB053475.1| Oryza sativa gene for RISBZ1, complete cds
          Length = 4442

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 25  aagcaagcaaagcaagcagc 44
           ||||||||||||||||||||
Sbjct: 666 aagcaagcaaagcaagcagc 647

>emb|AL645852.23| Mouse DNA sequence from clone RP23-354K2 on chromosome 11, complete
             sequence
          Length = 158089

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    caagcaagcaaagcaagcag 43
             ||||||||||||||||||||
Sbjct: 51481 caagcaagcaaagcaagcag 51462


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,802,416
Number of Sequences: 3902068
Number of extensions: 1802416
Number of successful extensions: 133275
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132191
Number of HSP's gapped (non-prelim): 1084
length of query: 214
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 192
effective length of database: 17,147,199,772
effective search space: 3292262356224
effective search space used: 3292262356224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)