ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast25e04 |
|---|---|
| Clone Library Name | barley_pub |
>B3GA1_RAT (O35789) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 35.4 bits (80), Expect = 0.038 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = +3 Query: 174 VVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVE 278 VVTPTYSR Q LT + ++L +VP L W+VVE Sbjct: 88 VVTPTYSRPVQKAELTRMANTLLHVP-NLHWLVVE 121
>B3GA1_HUMAN (Q9P2W7) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 35.4 bits (80), Expect = 0.038 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = +3 Query: 174 VVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVE 278 VVTPTYSR Q LT + ++L +VP L W+VVE Sbjct: 88 VVTPTYSRPVQKAELTRMANTLLHVP-NLHWLVVE 121
>B3GA1_CANFA (Q5CB03) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 335 Score = 35.4 bits (80), Expect = 0.038 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = +3 Query: 174 VVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVE 278 VVTPTYSR Q LT + ++L +VP L W+VVE Sbjct: 89 VVTPTYSRPVQKAELTRMANTLLHVP-NLHWLVVE 122
>B3GA1_PANTR (Q5CB04) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 332 Score = 35.4 bits (80), Expect = 0.038 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = +3 Query: 174 VVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVE 278 VVTPTYSR Q LT + ++L +VP L W+VVE Sbjct: 88 VVTPTYSRPVQKAELTRMANTLLHVP-NLHWLVVE 121
>B3GA2_RAT (Q9Z137) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 324 Score = 33.9 bits (76), Expect = 0.11 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Frame = +3 Query: 156 EPR--QVLVVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVE 278 EPR + +TPTYSR Q LT L ++ R V L WI+VE Sbjct: 77 EPRLPTIYAITPTYSRPVQKAELTRLANTFRQVA-QLHWILVE 118
>B3GA2_MOUSE (P59270) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 324 Score = 33.9 bits (76), Expect = 0.11 Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Frame = +3 Query: 156 EPR--QVLVVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVE 278 EPR + +TPTYSR Q LT L ++ R V L WI+VE Sbjct: 77 EPRLPTIYAITPTYSRPVQKAELTRLANTFRQVA-QLHWILVE 118
>B3GA2_HUMAN (Q9NPZ5) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 323 Score = 33.9 bits (76), Expect = 0.11 Identities = 30/85 (35%), Positives = 39/85 (45%) Frame = +3 Query: 24 SHVVVGRHGIRIRPWPHPDPVEVMRAHRIMERVQEEQRRWYGVREPRQVLVVTPTYSRAF 203 S VGR G R+ P P AH +R Q + + P + +TPTYSR Sbjct: 41 SPYAVGRGGARL-PLRRGGP-----AHGTQKRNQSRPQPQPEPQLPT-IYAITPTYSRPV 93 Query: 204 QALHLTGLLHSLRNVPYPLTWIVVE 278 Q LT L ++ R V L WI+VE Sbjct: 94 QKAELTRLANTFRQVA-QLHWILVE 117
>B3GA1_MOUSE (Q9CW73) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 1 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 1) (Glucuronosyltransferase-P) (GlcAT-P) (UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase) (GlcUAT-P) Length = 334 Score = 33.5 bits (75), Expect = 0.14 Identities = 18/34 (52%), Positives = 23/34 (67%) Frame = +3 Query: 174 VVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVV 275 VVTPTYSR Q LT + ++L +VP L W+VV Sbjct: 88 VVTPTYSRPVQKAELTRMANTLLHVP-NLHWLVV 120
>B3GA2_CANFA (Q5CAZ6) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 2 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 2) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (GlcAT-D) Length = 329 Score = 32.7 bits (73), Expect = 0.25 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = +3 Query: 168 VLVVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVE 278 + +TPTYSR Q LT L ++ R V L WI+VE Sbjct: 88 IYAITPTYSRPVQKAELTRLANTFRQVA-QLHWILVE 123
>SQV8_CAEEL (Q09363) Probable glucuronosyltransferase sqv-8 (EC 2.4.1.135)| (Vulval invagination protein sqv-8) (Squashed vulva protein 8) Length = 356 Score = 32.7 bits (73), Expect = 0.25 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = +3 Query: 168 VLVVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVE 278 + +TPT+ RA Q LT L ++L +VP L WIVVE Sbjct: 99 IYFITPTHFRAAQRADLTRLSYTLSHVP-NLHWIVVE 134
>B3G2S_DROME (Q9VLA1) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase S (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase S) (Glucuronosyltransferase-S) (GlcAT-S) (UDP-glucuronosyltransferase-S) (DmGlcAT-BSI) Length = 409 Score = 31.2 bits (69), Expect = 0.71 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +3 Query: 168 VLVVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVE 278 + VTPTY R Q LT L H+L ++P L W+V + Sbjct: 133 IYFVTPTYPRREQIPELTRLAHTLLHIP-RLHWLVAD 168
>B3GA3_HUMAN (O94766) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase-I) (GlcAT-I) (UDP-GlcUA:Gal beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Length = 335 Score = 30.8 bits (68), Expect = 0.93 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = +3 Query: 168 VLVVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVE 278 + VVTPTY+R Q L L +L VP L W++VE Sbjct: 77 IYVVTPTYARLVQKAELVRLSQTLSLVP-RLHWLLVE 112
>CHRD_XENLA (Q91713) Chordin precursor (Organizer-specific secreted dorsalizing| factor) Length = 941 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = -3 Query: 166 WRGSLTPY-QRRCSSCT--RSMIRCARMTSTGSGCGQGRIRIPC 44 W ++ P+ + +C +CT + +C R TG+ CG G R C Sbjct: 872 WHPTVPPFGEMKCVTCTCAEGITQCRRQECTGTTCGTGSKRDRC 915
>B3GA3_MOUSE (P58158) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase-I) (GlcAT-I) (UDP-GlcUA:Gal Beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Length = 335 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +3 Query: 168 VLVVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVE 278 + V+TPTY+R Q L L +L VP L W++VE Sbjct: 77 IYVITPTYARLVQKAELVRLSQTLSLVP-RLHWLLVE 112
>B3GA3_CRIGR (Q9WU47) Galactosylgalactosylxylosylprotein| 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase-I) (GlcAT-I) (UDP-GlcUA:Gal Beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I) Length = 335 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = +3 Query: 168 VLVVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVE 278 + V+TPTY+R Q L L +L VP L W++VE Sbjct: 77 IYVITPTYARLVQKAELVRLSQTLSLVP-RLHWLLVE 112
>SUC1_CANAL (P33181) Probable sucrose utilization protein SUC1| Length = 501 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 6/48 (12%) Frame = -3 Query: 163 RGSLTPYQRRCSSCTRSMIR------CARMTSTGSGCGQGRIRIPCRP 38 +G PY R C SC+ ++ C+R C RIR C P Sbjct: 3 KGKRAPYTRPCDSCSFRKVKCDMKTPCSRCVLNNLKCTNNRIRKKCGP 50
>ZN307_HUMAN (Q969J2) Zinc finger protein 307 (P373c6.1)| Length = 545 Score = 28.1 bits (61), Expect = 6.0 Identities = 12/42 (28%), Positives = 20/42 (47%) Frame = -3 Query: 229 RRPVRWSAWKARE*VGVTTSTWRGSLTPYQRRCSSCTRSMIR 104 + P +W+++ G T S W + P +C+ C RS R Sbjct: 460 QNPEHGESWESQ---GRTESQWENTEAPVSYKCNECERSFTR 498
>NAGZ_NITMU (Q2Y863) Beta-hexosaminidase (EC 3.2.1.52)| (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) Length = 349 Score = 28.1 bits (61), Expect = 6.0 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 Query: 168 VLVVTPTYSRAFQALHLTGLLHSLRNVP 251 V++ T YS Q +HLT +H+LR P Sbjct: 31 VILFTRNYSSLAQLMHLTAEIHALRTPP 58
>Y7700_STRCO (Q9F1Y6) Hypothetical protein SCO7700| Length = 440 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +3 Query: 3 EAPGSTQSHVVVGRHGIRIRPWPHPDPVEVMRAHRIMERVQEEQRRWY 146 EAP S G+ P P PDPV V R ++R E++ + Y Sbjct: 106 EAPASAPPAAGRAVPGLYHHPVPEPDPVRVEEVSRRIKRWAEDEVQLY 153 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.123 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,933,174 Number of Sequences: 219361 Number of extensions: 558617 Number of successful extensions: 1766 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1704 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1765 length of database: 80,573,946 effective HSP length: 69 effective length of database: 65,438,037 effective search space used: 1570512888 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
