ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast25d01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF118226.1|AF118226 Hordeum vulgare high pI alpha-glucosidase (AGL97) gene, complete cds Length = 7113 Score = 815 bits (411), Expect = 0.0 Identities = 414/415 (99%) Strand = Plus / Plus Query: 6 tcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacccgcgcgccg 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5666 tcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacccgcgcgccg 5725 Query: 66 ccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcgacgggctgt 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5726 ccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcgacgggctgt 5785 Query: 126 ggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacgcgctcgacg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5786 ggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacgcgctcgacg 5845 Query: 186 acccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaacaagacggtgc 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5846 acccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaacaagacggtgc 5905 Query: 246 cggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcacaacctcttcggcc 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5906 cggcctccgccgtgcactacggcggcgtcaccgagtacgacgcgcacaacctcttcggcc 5965 Query: 306 tcctcgaggcccgcgccacgcaccgcgcgctgctgagagacaccggccgccgccccttcg 365 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 5966 tcctcgaggcccgcgccacgcaccgcgcgctgctgagggacaccggccgccgccccttcg 6025 Query: 366 tgctcagcaggtccaccttcgtcggctccggccggtacaccgctcactggactgg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6026 tgctcagcaggtccaccttcgtcggctccggccggtacaccgctcactggactgg 6080
>gb|U22450.1|HVU22450 Hordeum vulgare alpha-glucosidase mRNA, complete cds Length = 2738 Score = 603 bits (304), Expect = e-169 Identities = 390/416 (93%), Gaps = 2/416 (0%) Strand = Plus / Plus Query: 6 tcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacccgcgcgccg 65 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1225 tcgtcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacccagccgccg 1284 Query: 66 ccgagttctgggcgcgggagatctccctcttccgccggaccatccccgtcgacgggctgt 125 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1285 ccgagttctgggcgcgggagatctccctcttccgccggaccatcccggtcgacgggctgt 1344 Query: 126 ggatcgacatgaacgagatctccaacttctacaacccggagccgatgaacgcgctcgacg 185 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1345 ggatcgacatgaacgagatctccaacttctacaacccggagcccatgaacgcgctcgacg 1404 Query: 186 acccgccgtaccggatcaacaacgacggcacgggccgccccatcaacaacaagacggtgc 245 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1405 acccgccgtaccggatcaacaacgacgggacgggccgccccatcaacaacaagacggtgc 1464 Query: 246 cggcctc-cgccgtgcactacggcggcgtcaccgagtacgacgcgcacaacctcttcggc 304 | || | ||||||||||||||| || |||||||||||||| | ||||||||| |||||| Sbjct: 1465 -gcccgctcgccgtgcactacgggggggtcaccgagtacgaggagcacaacctgttcggc 1523 Query: 305 ctcctcgaggcccgcgccacgcaccgcgcgctgctgagagacaccggccgccgccccttc 364 ||||||||||||||||||||| |||| | ||||||| ||||||||||||||||||||| Sbjct: 1524 ctcctcgaggcccgcgccacggggcgcggggtgctgagggacaccggccgccgccccttc 1583 Query: 365 gtgctcagcaggtccaccttcgtcggctccggccggtacaccgctcactggactgg 420 ||||||||||||||||||||||| ||||| || || ||||||||| |||||||||| Sbjct: 1584 gtgctcagcaggtccaccttcgtgggctcggggcgctacaccgcttactggactgg 1639
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 454 bits (229), Expect = e-124 Identities = 358/401 (89%) Strand = Plus / Plus Query: 17 gtgtggccgggcgacgtctacttcccggacttcatgcacccgcgcgccgccgagttctgg 76 ||||||||||| |||||| ||||||||||||| | ||||||||||||||||||||||| Sbjct: 27720600 gtgtggccggggaacgtctccttcccggacttcctcaacccgcgcgccgccgagttctgg 27720659 Query: 77 gcgcgggagatctccctcttccgccggaccatccccgtcgacgggctgtggatcgacatg 136 ||||| |||||| || ||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 27720660 gcgcgcgagatcgccgcgttccggcggaccctccccgtcgacgggctgtggatcgacatg 27720719 Query: 137 aacgagatctccaacttctacaacccggagccgatgaacgcgctcgacgacccgccgtac 196 |||||||||||||||||| | ||||| |||| | |||||||||||||||||||||||| Sbjct: 27720720 aacgagatctccaacttcgtcgacccgccgccgctcaacgcgctcgacgacccgccgtac 27720779 Query: 197 cggatcaacaacgacggcacgggccgccccatcaacaacaagacggtgccggcctccgcc 256 || ||| ||||| |||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 27720780 cgcatcgacaactccggcgtgcgccgccccatcaacaacaagacggtgccggcctccgcc 27720839 Query: 257 gtgcactacggcggcgtcaccgagtacgacgcgcacaacctcttcggcctcctcgaggcc 316 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 27720840 gtgcactacggcggcgtggccgagtacgacgcgcacaacctcttcggcttcctcgaggcg 27720899 Query: 317 cgcgccacgcaccgcgcgctgctgagagacaccggccgccgccccttcgtgctcagcagg 376 || ||||||||| ||||||||| | ||||||||||||||||| |||||||||||| | Sbjct: 27720900 cgggccacgcacgacgcgctgctccgtgacaccggccgccgcccgttcgtgctcagccgc 27720959 Query: 377 tccaccttcgtcggctccggccggtacaccgctcactggac 417 ||||| ||||||||||||||| |||||||||| |||||||| Sbjct: 27720960 tccacgttcgtcggctccggcaggtacaccgcgcactggac 27721000 Score = 454 bits (229), Expect = e-124 Identities = 358/401 (89%) Strand = Plus / Minus Query: 17 gtgtggccgggcgacgtctacttcccggacttcatgcacccgcgcgccgccgagttctgg 76 ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 27663437 gtgtggccggggaacgtctacttcccggacttcctcaacccgcgcgccgccgagttctgg 27663378 Query: 77 gcgcgggagatctccctcttccgccggaccatccccgtcgacgggctgtggatcgacatg 136 ||||| |||||| || ||||| |||||| |||||||||||||||||||| |||||||| Sbjct: 27663377 gcgcgcgagatcgccgcgttccggcggaccctccccgtcgacgggctgtgggtcgacatg 27663318 Query: 137 aacgagatctccaacttctacaacccggagccgatgaacgcgctcgacgacccgccgtac 196 |||||||||||||||||| | ||||| |||| | |||||| ||||||||||||||||| Sbjct: 27663317 aacgagatctccaacttcgtcgacccgccgccgctcaacgcgatcgacgacccgccgtac 27663258 Query: 197 cggatcaacaacgacggcacgggccgccccatcaacaacaagacggtgccggcctccgcc 256 || ||||||||| |||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 27663257 cgcatcaacaactccggcgtgcgccgccccatcaacaacaagacggtgccggcctccgcc 27663198 Query: 257 gtgcactacggcggcgtcaccgagtacgacgcgcacaacctcttcggcctcctcgaggcc 316 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 27663197 gtgcactacggcggcgtggccgagtacgacgcgcacaacctcttcggcttcctcgaggcg 27663138 Query: 317 cgcgccacgcaccgcgcgctgctgagagacaccggccgccgccccttcgtgctcagcagg 376 || ||||||||| ||||||||| | |||||||||||||| || |||||||||||| | Sbjct: 27663137 cgggccacgcacgacgcgctgctccgtgacaccggccgccggccgttcgtgctcagccgc 27663078 Query: 377 tccaccttcgtcggctccggccggtacaccgctcactggac 417 ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 27663077 tccacgttcgtcggctccggcaggtacaccgctcactggac 27663037
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 454 bits (229), Expect = e-124 Identities = 358/401 (89%) Strand = Plus / Plus Query: 17 gtgtggccgggcgacgtctacttcccggacttcatgcacccgcgcgccgccgagttctgg 76 ||||||||||| |||||| ||||||||||||| | ||||||||||||||||||||||| Sbjct: 69855 gtgtggccggggaacgtctccttcccggacttcctcaacccgcgcgccgccgagttctgg 69914 Query: 77 gcgcgggagatctccctcttccgccggaccatccccgtcgacgggctgtggatcgacatg 136 ||||| |||||| || ||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 69915 gcgcgcgagatcgccgcgttccggcggaccctccccgtcgacgggctgtggatcgacatg 69974 Query: 137 aacgagatctccaacttctacaacccggagccgatgaacgcgctcgacgacccgccgtac 196 |||||||||||||||||| | ||||| |||| | |||||||||||||||||||||||| Sbjct: 69975 aacgagatctccaacttcgtcgacccgccgccgctcaacgcgctcgacgacccgccgtac 70034 Query: 197 cggatcaacaacgacggcacgggccgccccatcaacaacaagacggtgccggcctccgcc 256 || ||| ||||| |||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 70035 cgcatcgacaactccggcgtgcgccgccccatcaacaacaagacggtgccggcctccgcc 70094 Query: 257 gtgcactacggcggcgtcaccgagtacgacgcgcacaacctcttcggcctcctcgaggcc 316 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 70095 gtgcactacggcggcgtggccgagtacgacgcgcacaacctcttcggcttcctcgaggcg 70154 Query: 317 cgcgccacgcaccgcgcgctgctgagagacaccggccgccgccccttcgtgctcagcagg 376 || ||||||||| ||||||||| | ||||||||||||||||| |||||||||||| | Sbjct: 70155 cgggccacgcacgacgcgctgctccgtgacaccggccgccgcccgttcgtgctcagccgc 70214 Query: 377 tccaccttcgtcggctccggccggtacaccgctcactggac 417 ||||| ||||||||||||||| |||||||||| |||||||| Sbjct: 70215 tccacgttcgtcggctccggcaggtacaccgcgcactggac 70255 Score = 454 bits (229), Expect = e-124 Identities = 358/401 (89%) Strand = Plus / Minus Query: 17 gtgtggccgggcgacgtctacttcccggacttcatgcacccgcgcgccgccgagttctgg 76 ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 12692 gtgtggccggggaacgtctacttcccggacttcctcaacccgcgcgccgccgagttctgg 12633 Query: 77 gcgcgggagatctccctcttccgccggaccatccccgtcgacgggctgtggatcgacatg 136 ||||| |||||| || ||||| |||||| |||||||||||||||||||| |||||||| Sbjct: 12632 gcgcgcgagatcgccgcgttccggcggaccctccccgtcgacgggctgtgggtcgacatg 12573 Query: 137 aacgagatctccaacttctacaacccggagccgatgaacgcgctcgacgacccgccgtac 196 |||||||||||||||||| | ||||| |||| | |||||| ||||||||||||||||| Sbjct: 12572 aacgagatctccaacttcgtcgacccgccgccgctcaacgcgatcgacgacccgccgtac 12513 Query: 197 cggatcaacaacgacggcacgggccgccccatcaacaacaagacggtgccggcctccgcc 256 || ||||||||| |||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 12512 cgcatcaacaactccggcgtgcgccgccccatcaacaacaagacggtgccggcctccgcc 12453 Query: 257 gtgcactacggcggcgtcaccgagtacgacgcgcacaacctcttcggcctcctcgaggcc 316 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 12452 gtgcactacggcggcgtggccgagtacgacgcgcacaacctcttcggcttcctcgaggcg 12393 Query: 317 cgcgccacgcaccgcgcgctgctgagagacaccggccgccgccccttcgtgctcagcagg 376 || ||||||||| ||||||||| | |||||||||||||| || |||||||||||| | Sbjct: 12392 cgggccacgcacgacgcgctgctccgtgacaccggccgccggccgttcgtgctcagccgc 12333 Query: 377 tccaccttcgtcggctccggccggtacaccgctcactggac 417 ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 12332 tccacgttcgtcggctccggcaggtacaccgctcactggac 12292
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 454 bits (229), Expect = e-124 Identities = 358/401 (89%) Strand = Plus / Plus Query: 17 gtgtggccgggcgacgtctacttcccggacttcatgcacccgcgcgccgccgagttctgg 76 ||||||||||| |||||| ||||||||||||| | ||||||||||||||||||||||| Sbjct: 23109 gtgtggccggggaacgtctccttcccggacttcctcaacccgcgcgccgccgagttctgg 23168 Query: 77 gcgcgggagatctccctcttccgccggaccatccccgtcgacgggctgtggatcgacatg 136 ||||| |||||| || ||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 23169 gcgcgcgagatcgccgcgttccggcggaccctccccgtcgacgggctgtggatcgacatg 23228 Query: 137 aacgagatctccaacttctacaacccggagccgatgaacgcgctcgacgacccgccgtac 196 |||||||||||||||||| | ||||| |||| | |||||||||||||||||||||||| Sbjct: 23229 aacgagatctccaacttcgtcgacccgccgccgctcaacgcgctcgacgacccgccgtac 23288 Query: 197 cggatcaacaacgacggcacgggccgccccatcaacaacaagacggtgccggcctccgcc 256 || ||| ||||| |||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 23289 cgcatcgacaactccggcgtgcgccgccccatcaacaacaagacggtgccggcctccgcc 23348 Query: 257 gtgcactacggcggcgtcaccgagtacgacgcgcacaacctcttcggcctcctcgaggcc 316 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 23349 gtgcactacggcggcgtggccgagtacgacgcgcacaacctcttcggcttcctcgaggcg 23408 Query: 317 cgcgccacgcaccgcgcgctgctgagagacaccggccgccgccccttcgtgctcagcagg 376 || ||||||||| ||||||||| | ||||||||||||||||| |||||||||||| | Sbjct: 23409 cgggccacgcacgacgcgctgctccgtgacaccggccgccgcccgttcgtgctcagccgc 23468 Query: 377 tccaccttcgtcggctccggccggtacaccgctcactggac 417 ||||| ||||||||||||||| |||||||||| |||||||| Sbjct: 23469 tccacgttcgtcggctccggcaggtacaccgcgcactggac 23509
>dbj|AK121588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037N10, full insert sequence Length = 2804 Score = 454 bits (229), Expect = e-124 Identities = 358/401 (89%) Strand = Plus / Plus Query: 17 gtgtggccgggcgacgtctacttcccggacttcatgcacccgcgcgccgccgagttctgg 76 ||||||||||| |||||| ||||||||||||| | ||||||||||||||||||||||| Sbjct: 1272 gtgtggccggggaacgtctccttcccggacttcctcaacccgcgcgccgccgagttctgg 1331 Query: 77 gcgcgggagatctccctcttccgccggaccatccccgtcgacgggctgtggatcgacatg 136 ||||| |||||| || ||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 1332 gcgcgcgagatcgccgcgttccggcggaccctccccgtcgacgggctgtggatcgacatg 1391 Query: 137 aacgagatctccaacttctacaacccggagccgatgaacgcgctcgacgacccgccgtac 196 |||||||||||||||||| | ||||| |||| | |||||||||||||||||||||||| Sbjct: 1392 aacgagatctccaacttcgtcgacccgccgccgctcaacgcgctcgacgacccgccgtac 1451 Query: 197 cggatcaacaacgacggcacgggccgccccatcaacaacaagacggtgccggcctccgcc 256 || ||| ||||| |||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 1452 cgcatcgacaactccggcgtgcgccgccccatcaacaacaagacggtgccggcctccgcc 1511 Query: 257 gtgcactacggcggcgtcaccgagtacgacgcgcacaacctcttcggcctcctcgaggcc 316 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 1512 gtgcactacggcggcgtggccgagtacgacgcgcacaacctcttcggcttcctcgaggcg 1571 Query: 317 cgcgccacgcaccgcgcgctgctgagagacaccggccgccgccccttcgtgctcagcagg 376 || ||||||||| ||||||||| | ||||||||||||||||| |||||||||||| | Sbjct: 1572 cgggccacgcacgacgcgctgctccgtgacaccggccgccgcccgttcgtgctcagccgc 1631 Query: 377 tccaccttcgtcggctccggccggtacaccgctcactggac 417 ||||| ||||||||||||||| |||||||||| |||||||| Sbjct: 1632 tccacgttcgtcggctccggcaggtacaccgcgcactggac 1672
>dbj|AK105449.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B12, full insert sequence Length = 2873 Score = 454 bits (229), Expect = e-124 Identities = 358/401 (89%) Strand = Plus / Plus Query: 17 gtgtggccgggcgacgtctacttcccggacttcatgcacccgcgcgccgccgagttctgg 76 ||||||||||| |||||| ||||||||||||| | ||||||||||||||||||||||| Sbjct: 1340 gtgtggccggggaacgtctccttcccggacttcctcaacccgcgcgccgccgagttctgg 1399 Query: 77 gcgcgggagatctccctcttccgccggaccatccccgtcgacgggctgtggatcgacatg 136 ||||| |||||| || ||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 1400 gcgcgcgagatcgccgcgttccggcggaccctccccgtcgacgggctgtggatcgacatg 1459 Query: 137 aacgagatctccaacttctacaacccggagccgatgaacgcgctcgacgacccgccgtac 196 |||||||||||||||||| | ||||| |||| | |||||||||||||||||||||||| Sbjct: 1460 aacgagatctccaacttcgtcgacccgccgccgctcaacgcgctcgacgacccgccgtac 1519 Query: 197 cggatcaacaacgacggcacgggccgccccatcaacaacaagacggtgccggcctccgcc 256 || ||| ||||| |||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 1520 cgcatcgacaactccggcgtgcgccgccccatcaacaacaagacggtgccggcctccgcc 1579 Query: 257 gtgcactacggcggcgtcaccgagtacgacgcgcacaacctcttcggcctcctcgaggcc 316 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 1580 gtgcactacggcggcgtggccgagtacgacgcgcacaacctcttcggcttcctcgaggcg 1639 Query: 317 cgcgccacgcaccgcgcgctgctgagagacaccggccgccgccccttcgtgctcagcagg 376 || ||||||||| ||||||||| | ||||||||||||||||| |||||||||||| | Sbjct: 1640 cgggccacgcacgacgcgctgctccgtgacaccggccgccgcccgttcgtgctcagccgc 1699 Query: 377 tccaccttcgtcggctccggccggtacaccgctcactggac 417 ||||| ||||||||||||||| |||||||||| |||||||| Sbjct: 1700 tccacgttcgtcggctccggcaggtacaccgcgcactggac 1740
>dbj|AK119824.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-D07, full insert sequence Length = 2829 Score = 446 bits (225), Expect = e-122 Identities = 357/401 (89%) Strand = Plus / Plus Query: 17 gtgtggccgggcgacgtctacttcccggacttcatgcacccgcgcgccgccgagttctgg 76 ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 1294 gtgtggccggggaacgtctacttcccggacttcctcaacccgcgcgccgccgagttctgg 1353 Query: 77 gcgcgggagatctccctcttccgccggaccatccccgtcgacgggctgtggatcgacatg 136 ||||| |||||| || ||||| |||||| |||||||||||||||||||| |||||||| Sbjct: 1354 gcgcgcgagatcgccgcgttccggcggaccctccccgtcgacgggctgtgggtcgacatg 1413 Query: 137 aacgagatctccaacttctacaacccggagccgatgaacgcgctcgacgacccgccgtac 196 | |||||||||||||||| | ||||| |||| | |||||| ||||||||||||||||| Sbjct: 1414 agcgagatctccaacttcgtcgacccgccgccgctcaacgcgatcgacgacccgccgtac 1473 Query: 197 cggatcaacaacgacggcacgggccgccccatcaacaacaagacggtgccggcctccgcc 256 || ||||||||| |||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 1474 cgcatcaacaactccggcgtgcgccgccccatcaacaacaagacggtgccggcctccgcc 1533 Query: 257 gtgcactacggcggcgtcaccgagtacgacgcgcacaacctcttcggcctcctcgaggcc 316 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 1534 gtgcactacggcggcgtggccgagtacgacgcgcacaacctcttcggcttcctcgaggcg 1593 Query: 317 cgcgccacgcaccgcgcgctgctgagagacaccggccgccgccccttcgtgctcagcagg 376 || ||||||||| ||||||||| | |||||||||||||| || |||||||||||| | Sbjct: 1594 cgggccacgcacgacgcgctgctccgtgacaccggccgccggccgttcgtgctcagccgc 1653 Query: 377 tccaccttcgtcggctccggccggtacaccgctcactggac 417 ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 1654 tccacgttcgtcggctccggcaggtacaccgctcactggac 1694
>gb|BT019289.1| Zea mays clone Contig962.F mRNA sequence Length = 1946 Score = 383 bits (193), Expect = e-103 Identities = 355/409 (86%) Strand = Plus / Minus Query: 9 tcggcaacgtgtggccgggcgacgtctacttcccggacttcatgcacccgcgcgccgccg 68 ||||||| |||||||| || |||||||||||||||||||| | ||||||||||||||| Sbjct: 1556 tcggcaaggtgtggcccgggtacgtctacttcccggacttcctcaacccgcgcgccgccg 1497 Query: 69 agttctgggcgcgggagatctccctcttccgccggaccatccccgtcgacgggctgtgga 128 ||||||||||||| |||||| |||| ||||| ||||| ||||||||||||| || |||| Sbjct: 1496 agttctgggcgcgcgagatcgccctgttccggcggacgctccccgtcgacggcctctgga 1437 Query: 129 tcgacatgaacgagatctccaacttctacaacccggagccgatgaacgcgctcgacgacc 188 |||||||||||||| ||||||||||| | |||||| ||| | |||||||| ||||||| Sbjct: 1436 tcgacatgaacgaggtctccaacttcgtcgacccggcgcccctcaacgcgctggacgacc 1377 Query: 189 cgccgtaccggatcaacaacgacggcacgggccgccccatcaacaacaagacggtgccgg 248 |||||||||| ||||||||| |||| | |||||||||||||||||||||| ||||| Sbjct: 1376 cgccgtaccgcatcaacaactccggcgtgcgccgccccatcaacaacaagaccacgccgg 1317 Query: 249 cctccgccgtgcactacggcggcgtcaccgagtacgacgcgcacaacctcttcggcctcc 308 | ||||| ||||||||||||||||| ||| ||||||||||||||||||| |||| ||| Sbjct: 1316 cgtccgcggtgcactacggcggcgtgcgcgactacgacgcgcacaacctctacggcttcc 1257 Query: 309 tcgaggcccgcgccacgcaccgcgcgctgctgagagacaccggccgccgccccttcgtgc 368 | ||||| |||||||||||| |||||||||| |||||||||||||| |||||||||| Sbjct: 1256 tggaggcgcgcgccacgcacggcgcgctgctcgccgacaccggccgccggcccttcgtgc 1197 Query: 369 tcagcaggtccaccttcgtcggctccggccggtacaccgctcactggac 417 ||||| ||||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 1196 tcagccggtccacgttcgtggggtccggccggtacaccgcgcactggac 1148
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 102 ggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttc 154 ||||| ||| |||||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 134874 ggaccctcctcgtcgacgggctgtgggtcggcatgaacgagatctccgacttc 134822
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 102 ggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttc 154 ||||| ||| |||||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 134874 ggaccctcctcgtcgacgggctgtgggtcggcatgaacgagatctccgacttc 134822
>emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa0029D01 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147503 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 102 ggaccatccccgtcgacgggctgtggatcgacatgaacgagatctccaacttc 154 ||||| ||| |||||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 134874 ggaccctcctcgtcgacgggctgtgggtcggcatgaacgagatctccgacttc 134822
>gb|AF448201.1| Pinus pinaster putative alpha-xylosidase (XYL1) mRNA, complete cds Length = 2881 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 108 tccccgtcgacgggctgtggatcgacatgaacgagatctccaacttct 155 ||||||| ||||| || |||||||||||||||||||||||||| |||| Sbjct: 1292 tccccgtggacggtctctggatcgacatgaacgagatctccaatttct 1339
>gb|DQ490470.1| Emericella nidulans alpha-glucosidase (AN0941-2) mRNA, complete cds Length = 2625 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 116 gacgggctgtggatcgacatgaacgag 142 ||||| ||||||||||||||||||||| Sbjct: 1246 gacggcctgtggatcgacatgaacgag 1272
>ref|XM_653453.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0941.2), mRNA Length = 2520 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 116 gacgggctgtggatcgacatgaacgag 142 ||||| ||||||||||||||||||||| Sbjct: 1174 gacggcctgtggatcgacatgaacgag 1200
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 116 gacgggctgtggatcgacatgaacgag 142 ||||| ||||||||||||||||||||| Sbjct: 2879452 gacggcctgtggatcgacatgaacgag 2879478
>ref|XM_747898.1| Aspergillus fumigatus Af293 alpha-glucosidase B (Afu1g16250) partial mRNA Length = 2646 Score = 44.1 bits (22), Expect = 0.36 Identities = 37/42 (88%) Strand = Plus / Plus Query: 114 tcgacgggctgtggatcgacatgaacgagatctccaacttct 155 ||||||| ||||||||||| ||||||||| | ||||||||| Sbjct: 1247 tcgacggtctgtggatcgatatgaacgaggccgccaacttct 1288
>gb|AY373973.1| Helicoverpa armigera cathepsin L-like protease mRNA, complete cds Length = 1540 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 241 ggtgccggcctccgccgtgcac 262 |||||||||||||||||||||| Sbjct: 1185 ggtgccggcctccgccgtgcac 1206
>dbj|AB243675.1| Magnetospirillum sp. TS-6 bcl gene for benzoate-CoA ligase, complete cds Length = 1587 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 243 tgccggcctccgccgtgcactacggc 268 |||||||| ||||||||||||||||| Sbjct: 602 tgccggccaccgccgtgcactacggc 627
>ref|XM_550012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1990 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 17 gtgtggccgggcgacgtctacttcccggacttc 49 |||||||| ||| ||||||||||||||||||| Sbjct: 1436 gtgtggcccggccccgtctacttcccggacttc 1404
>ref|NM_184232.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3193 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 17 gtgtggccgggcgacgtctacttcccggacttc 49 |||||||| ||| ||||||||||||||||||| Sbjct: 1472 gtgtggcccggccccgtctacttcccggacttc 1504
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 tcaacaacgacggcacgggcc 221 ||||||||||||||||||||| Sbjct: 2182555 tcaacaacgacggcacgggcc 2182575
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 cagcaggtccaccttcgtcgg 390 ||||||||||||||||||||| Sbjct: 477557 cagcaggtccaccttcgtcgg 477537
>gb|DQ490507.1| Emericella nidulans alpha/beta-glucosidase (AN7345-2) mRNA, complete cds Length = 2685 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 ctgtggatcgacatgaacgag 142 ||||||||||||||||||||| Sbjct: 1276 ctgtggatcgacatgaacgag 1296
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 tcaacaacgacggcacgggcc 221 ||||||||||||||||||||| Sbjct: 3357351 tcaacaacgacggcacgggcc 3357371
>ref|XM_675522.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7345.2), mRNA Length = 2628 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 ctgtggatcgacatgaacgag 142 ||||||||||||||||||||| Sbjct: 1276 ctgtggatcgacatgaacgag 1296
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 236 aagacggtgccggcctccgccgtgc 260 |||||| |||||||||||||||||| Sbjct: 4977259 aagacgctgccggcctccgccgtgc 4977235
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 298 cttcggcctcctcgaggcccgcgcc 322 |||||||||||||||||||| |||| Sbjct: 3428882 cttcggcctcctcgaggccctcgcc 3428906
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 201 tcaacaacgacggcacgggcc 221 ||||||||||||||||||||| Sbjct: 3088637 tcaacaacgacggcacgggcc 3088657
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 125 tggatcgacatgaacgagatctccaacttctacaacc 161 |||||||||||||||||| | | ||||||||||||| Sbjct: 1258942 tggatcgacatgaacgagcccgcaaacttctacaacc 1258906
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 17 gtgtggccgggcgacgtctacttcccggacttc 49 |||||||| ||| ||||||||||||||||||| Sbjct: 1700077 gtgtggcccggccccgtctacttcccggacttc 1700109
>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504H10 Length = 143515 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 17 gtgtggccgggcgacgtctacttcccggacttc 49 |||||||| ||| ||||||||||||||||||| Sbjct: 42420 gtgtggcccggccccgtctacttcccggacttc 42452
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 aacccggagccgatgaacgcg 178 ||||||||||||||||||||| Sbjct: 1409412 aacccggagccgatgaacgcg 1409392
>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408F06 Length = 137462 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 17 gtgtggccgggcgacgtctacttcccggacttc 49 |||||||| ||| ||||||||||||||||||| Sbjct: 137308 gtgtggcccggccccgtctacttcccggacttc 137340
>dbj|AK110956.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-A07, full insert sequence Length = 1990 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 17 gtgtggccgggcgacgtctacttcccggacttc 49 |||||||| ||| ||||||||||||||||||| Sbjct: 1436 gtgtggcccggccccgtctacttcccggacttc 1404
>dbj|AK102309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090B18, full insert sequence Length = 3486 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 17 gtgtggccgggcgacgtctacttcccggacttc 49 |||||||| ||| ||||||||||||||||||| Sbjct: 1473 gtgtggcccggccccgtctacttcccggacttc 1505
>dbj|AK063966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A04, full insert sequence Length = 3193 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 17 gtgtggccgggcgacgtctacttcccggacttc 49 |||||||| ||| ||||||||||||||||||| Sbjct: 1472 gtgtggcccggccccgtctacttcccggacttc 1504
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cgagatctccaacttctaca 158 |||||||||||||||||||| Sbjct: 3789762 cgagatctccaacttctaca 3789743
>gb|DQ397830.1| Cenarchaeum symbiosum clone C01C10, complete sequence Length = 40511 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cggcctcctcgaggcccgcg 320 |||||||||||||||||||| Sbjct: 5735 cggcctcctcgaggcccgcg 5716
>gb|DQ397827.1| Cenarchaeum symbiosum clone C01A01, complete sequence Length = 37585 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cggcctcctcgaggcccgcg 320 |||||||||||||||||||| Sbjct: 5593 cggcctcctcgaggcccgcg 5612
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cgccacgcaccgcgcgctgc 338 |||||||||||||||||||| Sbjct: 2935429 cgccacgcaccgcgcgctgc 2935410
>gb|AE012343.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 251 of 460 of the complete genome Length = 12314 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cgccacgcaccgcgcgctgc 338 |||||||||||||||||||| Sbjct: 8153 cgccacgcaccgcgcgctgc 8134
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cgccacgcaccgcgcgctgc 338 |||||||||||||||||||| Sbjct: 2142880 cgccacgcaccgcgcgctgc 2142899
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ccgcgccacgcaccgcgcgc 335 |||||||||||||||||||| Sbjct: 20282289 ccgcgccacgcaccgcgcgc 20282270
>gb|AF109386.2|AF109386 Streptomyces sp. 2065 protocatechuaic acid catabolic gene cluster, complete sequence Length = 6551 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 305 ctcctcgaggcccgcgccacgcaccgcg 332 |||| |||||||||||||| |||||||| Sbjct: 6066 ctccacgaggcccgcgccaggcaccgcg 6039
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ccgcgccacgcaccgcgcgc 335 |||||||||||||||||||| Sbjct: 61416 ccgcgccacgcaccgcgcgc 61397
>dbj|AK068184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133H08, full insert sequence Length = 887 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 acggcggcgtcaccgagtacgacg 287 ||||||||||||||| |||||||| Sbjct: 178 acggcggcgtcaccgcgtacgacg 201
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgagatctccaacttctaca 158 |||||||||||||||||||| Sbjct: 1784207 cgagatctccaacttctaca 1784226
>gb|AY779909.1| Drosophila melanogaster strain NVIII-9 enhancer of split complex, complete sequence Length = 47165 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 ggctgtggatcgacatgaacgaga 143 ||||||||||||||||||| |||| Sbjct: 8090 ggctgtggatcgacatgaaagaga 8113
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cgccacgcaccgcgcgctgc 338 |||||||||||||||||||| Sbjct: 2957178 cgccacgcaccgcgcgctgc 2957159
>dbj|AB057452.1| Physcomitrella patens subsp. patens PpGLU mRNA for alpha-glucosidase, complete cds Length = 3171 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 gagtacgacgcgcacaacct 297 |||||||||||||||||||| Sbjct: 1832 gagtacgacgcgcacaacct 1851 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,232,575 Number of Sequences: 3902068 Number of extensions: 2232575 Number of successful extensions: 45705 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44296 Number of HSP's gapped (non-prelim): 1408 length of query: 420 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 398 effective length of database: 17,147,199,772 effective search space: 6824585509256 effective search space used: 6824585509256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
