ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast25c11 |
|---|---|
| Clone Library Name | barley_pub |
>CRTC_MAIZE (Q9SP22) Calreticulin precursor| Length = 420 Score = 110 bits (274), Expect = 1e-24 Identities = 49/70 (70%), Positives = 51/70 (72%) Frame = +2 Query: 80 MAIRRGSSCXXXXXXXXXXXXXXXXXXFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTS 259 MAIR+GSS FFQEKFEDGWESRWVKSEWKKDENMAGEWNHTS Sbjct: 1 MAIRKGSSYAVAALLALASVAAVAGEVFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTS 60 Query: 260 GKWHGDAEDK 289 GKW+GDAEDK Sbjct: 61 GKWNGDAEDK 70
>CRTC_ORYSA (Q9SLY8) Calreticulin precursor| Length = 424 Score = 99.4 bits (246), Expect = 2e-21 Identities = 41/43 (95%), Positives = 42/43 (97%) Frame = +2 Query: 161 FFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAEDK 289 FFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKW+GD EDK Sbjct: 32 FFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPEDK 74
>CRTC_NICPL (Q40401) Calreticulin precursor| Length = 416 Score = 94.4 bits (233), Expect = 7e-20 Identities = 38/43 (88%), Positives = 40/43 (93%) Frame = +2 Query: 161 FFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAEDK 289 FF+E F DGWESRWVKSEWKKDENMAGEWNHTSGKW+GDA DK Sbjct: 30 FFEESFNDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDANDK 72
>CRTC_BETVU (O81919) Calreticulin precursor| Length = 416 Score = 91.3 bits (225), Expect = 6e-19 Identities = 36/43 (83%), Positives = 41/43 (95%) Frame = +2 Query: 161 FFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAEDK 289 FF+E+FEDGWE RWVKSEWKKDE+MAGEWN+TSGKW+GDA DK Sbjct: 28 FFEERFEDGWEKRWVKSEWKKDESMAGEWNYTSGKWNGDANDK 70
>CRTC_BERST (Q9ZPP1) Calreticulin precursor| Length = 416 Score = 90.1 bits (222), Expect = 1e-18 Identities = 35/43 (81%), Positives = 41/43 (95%) Frame = +2 Query: 161 FFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAEDK 289 FF+E+FEDGWES+WVKS+WK+DENMAGEWN TSGKW+GDA DK Sbjct: 25 FFEERFEDGWESKWVKSDWKRDENMAGEWNFTSGKWNGDANDK 67
>CRTC_RICCO (P93508) Calreticulin precursor| Length = 415 Score = 88.2 bits (217), Expect = 5e-18 Identities = 34/43 (79%), Positives = 40/43 (93%) Frame = +2 Query: 161 FFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAEDK 289 FF+E+FEDGWE+RWVKS+WKKDEN AGEWN+TSGKW+GD DK Sbjct: 23 FFEERFEDGWENRWVKSDWKKDENTAGEWNYTSGKWNGDPNDK 65
>CRTC_PRUAR (Q9XF98) Calreticulin precursor| Length = 421 Score = 86.7 bits (213), Expect = 1e-17 Identities = 33/43 (76%), Positives = 39/43 (90%) Frame = +2 Query: 161 FFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAEDK 289 FF+E+FEDGW+ RWV SEWKKDEN+AGEWN+TSGKW+GD DK Sbjct: 27 FFEERFEDGWDKRWVTSEWKKDENLAGEWNYTSGKWNGDPNDK 69
>CRTC1_ARATH (O04151) Calreticulin-1 precursor| Length = 425 Score = 83.6 bits (205), Expect = 1e-16 Identities = 32/42 (76%), Positives = 36/42 (85%) Frame = +2 Query: 164 FQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAEDK 289 F+EKFEDGWE RWVKS+WKKD+N AGEW HT+G W GDA DK Sbjct: 26 FEEKFEDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDANDK 67
>CRTC2_ARATH (Q38858) Calreticulin-2 precursor| Length = 424 Score = 82.8 bits (203), Expect = 2e-16 Identities = 31/42 (73%), Positives = 37/42 (88%) Frame = +2 Query: 164 FQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAEDK 289 F+E+F+DGWE+RWVKSEWKKD+N AGEW HT+G W GDA DK Sbjct: 26 FEERFDDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGDANDK 67
>CRTC3_ARATH (O04153) Calreticulin-3 precursor| Length = 424 Score = 63.9 bits (154), Expect = 1e-10 Identities = 24/43 (55%), Positives = 33/43 (76%) Frame = +2 Query: 161 FFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAEDK 289 F +E FE GW+SRWV S+WK++E AG + HT+GKW GD ++K Sbjct: 31 FLEEHFEGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDPDNK 73
>CRTC_CHLRE (Q9STD3) Calreticulin precursor| Length = 420 Score = 56.6 bits (135), Expect = 2e-08 Identities = 21/41 (51%), Positives = 28/41 (68%) Frame = +2 Query: 161 FFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAE 283 +F+E F+ W RW KS WK + AGE+ T+GKW+GDAE Sbjct: 21 YFKETFDGSWADRWTKSSWKVSDGSAGEFKLTAGKWYGDAE 61
>CRTC_DICDI (Q23858) Calreticulin precursor| Length = 424 Score = 55.5 bits (132), Expect = 4e-08 Identities = 20/42 (47%), Positives = 30/42 (71%) Frame = +2 Query: 164 FQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAEDK 289 F++ F++ WESRWV S+W K++ +G+ HT+GKW GD K Sbjct: 23 FKDTFDNDWESRWVVSDWHKEDGKSGKLVHTAGKWFGDENQK 64
>RAL1_ONCVO (P11012) RAL-1 protein precursor (RAL1 antigen) (41 kDa larval| antigen) Length = 388 Score = 42.0 bits (97), Expect = 4e-04 Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%) Frame = +2 Query: 161 FFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDA 280 +F+E F +D WE RW+KS+ K D G+W + GK++GDA Sbjct: 20 YFKEDFSDDDWEKRWIKSKHKDD---FGKWEISHGKFYGDA 57
>CRTC_HUMAN (P27797) Calreticulin precursor (CRP55) (Calregulin) (HACBP)| (ERp60) (grp60) Length = 417 Score = 38.5 bits (88), Expect = 0.004 Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 2/43 (4%) Frame = +2 Query: 161 FFQEKF--EDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAE 283 +F+E+F DGW SRW++S+ K D G++ +SGK++GD E Sbjct: 22 YFKEQFLDGDGWTSRWIESKHKSD---FGKFVLSSGKFYGDEE 61
>CRTC_SPIOL (P30806) Calreticulin (Fragment)| Length = 20 Score = 38.5 bits (88), Expect = 0.004 Identities = 13/18 (72%), Positives = 17/18 (94%) Frame = +2 Query: 161 FFQEKFEDGWESRWVKSE 214 FF+E+FEDGWE+RWVK + Sbjct: 3 FFEERFEDGWENRWVKKD 20
>CRTC_EUGGR (Q9ZNY3) Calreticulin precursor| Length = 401 Score = 38.1 bits (87), Expect = 0.006 Identities = 17/39 (43%), Positives = 25/39 (64%) Frame = +2 Query: 161 FFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGD 277 +++E FE WE+RW S K D G++ TSGK++GD Sbjct: 21 YYKETFEPDWETRWTHSTAKSD---YGKFKLTSGKFYGD 56
>CRTC_CRIGR (Q8K3H7) Calreticulin precursor (CRP55) (Calregulin) (HACBP)| (ERp60) Length = 417 Score = 37.4 bits (85), Expect = 0.010 Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 2/43 (4%) Frame = +2 Query: 161 FFQEKFEDG--WESRWVKSEWKKDENMAGEWNHTSGKWHGDAE 283 +F+E+F DG W +RWV+S+ K D G++ +SGK++GD E Sbjct: 22 YFKEQFLDGDDWTNRWVESKHKSD---FGKFVLSSGKFYGDQE 61
>CRTC_RAT (P18418) Calreticulin precursor (CRP55) (Calregulin) (HACBP)| (ERp60) (CALBP) (Calcium-binding protein 3) (CABP3) Length = 416 Score = 37.4 bits (85), Expect = 0.010 Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 2/43 (4%) Frame = +2 Query: 161 FFQEKFEDG--WESRWVKSEWKKDENMAGEWNHTSGKWHGDAE 283 +F+E+F DG W +RWV+S+ K D G++ +SGK++GD E Sbjct: 22 YFKEQFLDGDAWTNRWVESKHKSD---FGKFVLSSGKFYGDQE 61
>CRTC_MOUSE (P14211) Calreticulin precursor (CRP55) (Calregulin) (HACBP)| (ERp60) Length = 416 Score = 37.4 bits (85), Expect = 0.010 Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 2/43 (4%) Frame = +2 Query: 161 FFQEKFEDG--WESRWVKSEWKKDENMAGEWNHTSGKWHGDAE 283 +F+E+F DG W +RWV+S+ K D G++ +SGK++GD E Sbjct: 22 YFKEQFLDGDAWTNRWVESKHKSD---FGKFVLSSGKFYGDLE 61
>CRTC_RABIT (P15253) Calreticulin precursor (CRP55) (Calregulin) (HACBP)| (ERp60) Length = 418 Score = 37.0 bits (84), Expect = 0.013 Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 2/43 (4%) Frame = +2 Query: 161 FFQEKF--EDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAE 283 +F+E+F DGW RW++S+ K D G++ +SGK++GD E Sbjct: 22 YFKEQFLDGDGWTERWIESKHKSD---FGKFVLSSGKFYGDQE 61
>CRTC1_BOVIN (P52193) Calreticulin, brain isoform 1 precursor (CRP55)| (Calregulin) (HACBP) Length = 417 Score = 36.6 bits (83), Expect = 0.017 Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 2/43 (4%) Frame = +2 Query: 161 FFQEKF--EDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAE 283 +F+E+F DGW RW++S+ K D G++ +SGK++GD E Sbjct: 22 YFKEQFLDGDGWTERWIESKHKPD---FGKFVLSSGKFYGDQE 61
>CRTC_PIG (P28491) Calreticulin precursor (CRP55) (Calregulin) (HACBP)| (ERp60) (Fragment) Length = 105 Score = 36.2 bits (82), Expect = 0.022 Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 2/43 (4%) Frame = +2 Query: 161 FFQEKF--EDGWESRWVKSEWKKDENMAGEWNHTSGKWHGDAE 283 +F+E+F DGW RW++S+ K D G + +SGK++GD E Sbjct: 22 YFKEQFLDGDGWTDRWIESKHKPD---FGRFVLSSGKFYGDQE 61
>CALX_HELTU (Q39994) Calnexin homolog precursor| Length = 540 Score = 34.7 bits (78), Expect = 0.064 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +2 Query: 164 FQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWHGD 277 F E F++ +E W+ SE E+ GEW H+ + H D Sbjct: 35 FYESFDESFEGSWIVSE---KEDYPGEWKHSKSEGHDD 69
>CALX_ASPFU (Q6Q487) Calnexin homolog precursor| Length = 563 Score = 30.8 bits (68), Expect = 0.93 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = +2 Query: 164 FQEKFEDGWESRWVKSEWKKDENMAGE-WNHTSGKW 268 F E+F W+SRW S KK+++ + E W + G+W Sbjct: 50 FLEQFTADWDSRWTPSHAKKEDSKSEEDWAYV-GEW 84
>CRTC_CAEEL (P27798) Calreticulin precursor| Length = 395 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +2 Query: 161 FFQEKFEDG-WESRWVKSEWKKDENMAGEWNHTSGKW 268 +F+E+F D WE RWV+S+ K D G + ++GK+ Sbjct: 18 YFKEEFNDASWEKRWVQSKHKDD---FGAFKLSAGKF 51
>AL2SB_RAT (Q6AY08) Amyotrophic lateral sclerosis 2 chromosomal region| candidate gene 12 protein homolog Length = 411 Score = 27.7 bits (60), Expect = 7.8 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 170 EKFEDGWESRWVKSEWKKDENMAGE 244 ++ ED W R K+EW+KDE M E Sbjct: 230 DEMEDKWSRR--KAEWEKDEKMERE 252 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,359,326 Number of Sequences: 219361 Number of extensions: 476124 Number of successful extensions: 1760 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 1688 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1753 length of database: 80,573,946 effective HSP length: 71 effective length of database: 64,999,315 effective search space used: 1559983560 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
