ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast25c03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468091.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2653 Score = 450 bits (227), Expect = e-123 Identities = 365/411 (88%) Strand = Plus / Plus Query: 4 ctaccgcgcggcggagatcctcaagcccgatgtcacagcccccggcgtcaacatactcgc 63 |||||||||| |||||||||||||||| || |||| ||||||||||||||||| ||||| Sbjct: 1591 ctaccgcgcgccggagatcctcaagccggacgtcattgcccccggcgtcaacatcctcgc 1650 Query: 64 ggcctggaccggcgaggcctcccccaccgacctcgagatcgacccgaggcgcgtcccgtt 123 ||| |||||||||||| | | |||||||||||||| ||||||||||||||||| ||| Sbjct: 1651 ggcgtggaccggcgagtctgcgcccaccgacctcgacatcgacccgaggcgcgtggagtt 1710 Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgct 183 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1711 caacatcatctccggcacgtccatgtcgtgcccgcacgtcagcggcctcgccgcgctgct 1770 Query: 184 ccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccacggc 243 ||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 1771 ccgccaggcgcaaccggactggagcccggcggcgatcaagtcggcgctcatgaccacggc 1830 Query: 244 gtacaacctggacaactccggggagatcatcaaggacctggccaccgggagccagtcgac 303 ||||||| ||||||||||| | | | |||||||||||||||| ||||||| | ||||||| Sbjct: 1831 gtacaacgtggacaactccagcgcggtcatcaaggacctggctaccgggaccgagtcgac 1890 Query: 304 gccgttcgtccgcggcgccgggcacgtggaccccaacagcgcgctcaaccccgggctggt 363 |||||||||||| |||||||| ||||| ||||||||| |||||||| |||| || || || Sbjct: 1891 gccgttcgtccgtggcgccggccacgtcgaccccaaccgcgcgctcgaccctggcctcgt 1950 Query: 364 gtacgacgcggacaccgccgactacatcggcttcctctgcgcgctcggcta 414 ||||||||| | |||| |||||| || |||||||||| |||||||||| Sbjct: 1951 gtacgacgccgggaccgaagactacgtctccttcctctgcacgctcggcta 2001
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 450 bits (227), Expect = e-123 Identities = 365/411 (88%) Strand = Plus / Minus Query: 4 ctaccgcgcggcggagatcctcaagcccgatgtcacagcccccggcgtcaacatactcgc 63 |||||||||| |||||||||||||||| || |||| ||||||||||||||||| ||||| Sbjct: 33004749 ctaccgcgcgccggagatcctcaagccggacgtcattgcccccggcgtcaacatcctcgc 33004690 Query: 64 ggcctggaccggcgaggcctcccccaccgacctcgagatcgacccgaggcgcgtcccgtt 123 ||| |||||||||||| | | |||||||||||||| ||||||||||||||||| ||| Sbjct: 33004689 ggcgtggaccggcgagtctgcgcccaccgacctcgacatcgacccgaggcgcgtggagtt 33004630 Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgct 183 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 33004629 caacatcatctccggcacgtccatgtcgtgcccgcacgtcagcggcctcgccgcgctgct 33004570 Query: 184 ccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccacggc 243 ||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 33004569 ccgccaggcgcaaccggactggagcccggcggcgatcaagtcggcgctcatgaccacggc 33004510 Query: 244 gtacaacctggacaactccggggagatcatcaaggacctggccaccgggagccagtcgac 303 ||||||| ||||||||||| | | | |||||||||||||||| ||||||| | ||||||| Sbjct: 33004509 gtacaacgtggacaactccagcgcggtcatcaaggacctggctaccgggaccgagtcgac 33004450 Query: 304 gccgttcgtccgcggcgccgggcacgtggaccccaacagcgcgctcaaccccgggctggt 363 |||||||||||| |||||||| ||||| ||||||||| |||||||| |||| || || || Sbjct: 33004449 gccgttcgtccgtggcgccggccacgtcgaccccaaccgcgcgctcgaccctggcctcgt 33004390 Query: 364 gtacgacgcggacaccgccgactacatcggcttcctctgcgcgctcggcta 414 ||||||||| | |||| |||||| || |||||||||| |||||||||| Sbjct: 33004389 gtacgacgccgggaccgaagactacgtctccttcctctgcacgctcggcta 33004339 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 110 aggcgcgtcccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggc 169 ||||||||| |||||||||||||||||| ||||||||| |||||| |||| |||||||| Sbjct: 33027699 aggcgcgtcgagttcaacatcatctccggcacgtccatggcgtgcctgcacatgagcggc 33027640 Query: 170 ctcgccgc 177 ||||||| Sbjct: 33027639 atcgccgc 33027632 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 101 atcgacccgaggcgcgtcccgttcaacatcatctccgggacgtccatgtcgtgcccgcac 160 |||||| ||||||| ||| ||||||||||||||| || ||||||||| ||||||| ||| Sbjct: 33064799 atcgacacgaggcgtgtcgagttcaacatcatctctggcacgtccatggcgtgccctcac 33064740 Query: 161 gtgagcggcctcgc 174 ||||||||| |||| Sbjct: 33064739 gtgagcggcatcgc 33064726 Score = 73.8 bits (37), Expect = 4e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 10 cgcggcggagatcctcaagcccgatgtcacagcccccggcgtcaacatactcgcggcctg 69 |||| ||||||||||||||||||| | ||||||||||||| ||| ||||| || || Sbjct: 33001286 cgcgccggagatcctcaagcccgaccttgtcgcccccggcgtcagcatcctcgccgcgtg 33001345 Query: 70 gaccggcgaggcctcccccaccgacctcgagatcgacccgaggcgcgtcccgttcaacat 129 | ||||| | ||| || ||||| ||||| ||||| ||||||||||| ||||||||| Sbjct: 33001346 gtccggcctcgtctcgccaaccgaactcgacgtcgacacgaggcgcgtcaagttcaacat 33001405 Query: 130 catctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgc 182 | | ||||| || ||| |||||||||||||||||||| |||| ||||||| Sbjct: 33001406 cttgtccggtacatccgccgcgtgcccgcacgtgagcggcgtcgctgcgctgc 33001458 Score = 63.9 bits (32), Expect = 4e-07 Identities = 91/108 (84%), Gaps = 2/108 (1%) Strand = Plus / Minus Query: 134 tccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcaggc- 192 ||||||||||||||||||||||||||||| |||| ||| || ||||||| ||| || Sbjct: 5530858 tccgggacgtccatgtcgtgcccgcacgtcgccggcgtcgtcggcctgctcc-gcacgct 5530800 Query: 193 gcacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 || ||| |||||||||||||||||| || || |||||||||||||| Sbjct: 5530799 gcgccccgactggagccccgcggcgatccgctccgcgctcatgaccac 5530752 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 326 cacgtggaccccaacagcgcgctcaaccccgggctggtgtacgacgcggacaccgccgac 385 ||||| |||||||||| ||| ||| |||| || || |||||| |||| ||||| |||| Sbjct: 33064574 cacgttgaccccaacaacgctctcgaccctggccttgtgtacaacgccaccaccgacgac 33064515 Query: 386 tacatcggcttcctctgcg 404 ||||||| ||||||||||| Sbjct: 33064514 tacatcgccttcctctgcg 33064496 Score = 42.1 bits (21), Expect = 1.4 Identities = 48/57 (84%) Strand = Plus / Minus Query: 10 cgcggcggagatcctcaagcccgatgtcacagcccccggcgtcaacatactcgcggc 66 |||||| |||||||||||||| ||| | | ||| ||||| ||| |||| |||||||| Sbjct: 33054215 cgcggctgagatcctcaagccggatatgatagcacccggtgtcgacatcctcgcggc 33054159
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 450 bits (227), Expect = e-123 Identities = 365/411 (88%) Strand = Plus / Minus Query: 4 ctaccgcgcggcggagatcctcaagcccgatgtcacagcccccggcgtcaacatactcgc 63 |||||||||| |||||||||||||||| || |||| ||||||||||||||||| ||||| Sbjct: 50689 ctaccgcgcgccggagatcctcaagccggacgtcattgcccccggcgtcaacatcctcgc 50630 Query: 64 ggcctggaccggcgaggcctcccccaccgacctcgagatcgacccgaggcgcgtcccgtt 123 ||| |||||||||||| | | |||||||||||||| ||||||||||||||||| ||| Sbjct: 50629 ggcgtggaccggcgagtctgcgcccaccgacctcgacatcgacccgaggcgcgtggagtt 50570 Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgct 183 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 50569 caacatcatctccggcacgtccatgtcgtgcccgcacgtcagcggcctcgccgcgctgct 50510 Query: 184 ccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccacggc 243 ||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 50509 ccgccaggcgcaaccggactggagcccggcggcgatcaagtcggcgctcatgaccacggc 50450 Query: 244 gtacaacctggacaactccggggagatcatcaaggacctggccaccgggagccagtcgac 303 ||||||| ||||||||||| | | | |||||||||||||||| ||||||| | ||||||| Sbjct: 50449 gtacaacgtggacaactccagcgcggtcatcaaggacctggctaccgggaccgagtcgac 50390 Query: 304 gccgttcgtccgcggcgccgggcacgtggaccccaacagcgcgctcaaccccgggctggt 363 |||||||||||| |||||||| ||||| ||||||||| |||||||| |||| || || || Sbjct: 50389 gccgttcgtccgtggcgccggccacgtcgaccccaaccgcgcgctcgaccctggcctcgt 50330 Query: 364 gtacgacgcggacaccgccgactacatcggcttcctctgcgcgctcggcta 414 ||||||||| | |||| |||||| || |||||||||| |||||||||| Sbjct: 50329 gtacgacgccgggaccgaagactacgtctccttcctctgcacgctcggcta 50279 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Minus Query: 110 aggcgcgtcccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggc 169 ||||||||| |||||||||||||||||| ||||||||| |||||| |||| |||||||| Sbjct: 73639 aggcgcgtcgagttcaacatcatctccggcacgtccatggcgtgcctgcacatgagcggc 73580 Query: 170 ctcgccgc 177 ||||||| Sbjct: 73579 atcgccgc 73572 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 101 atcgacccgaggcgcgtcccgttcaacatcatctccgggacgtccatgtcgtgcccgcac 160 |||||| ||||||| ||| ||||||||||||||| || ||||||||| ||||||| ||| Sbjct: 110739 atcgacacgaggcgtgtcgagttcaacatcatctctggcacgtccatggcgtgccctcac 110680 Query: 161 gtgagcggcctcgc 174 ||||||||| |||| Sbjct: 110679 gtgagcggcatcgc 110666 Score = 73.8 bits (37), Expect = 4e-10 Identities = 139/173 (80%) Strand = Plus / Plus Query: 10 cgcggcggagatcctcaagcccgatgtcacagcccccggcgtcaacatactcgcggcctg 69 |||| ||||||||||||||||||| | ||||||||||||| ||| ||||| || || Sbjct: 47226 cgcgccggagatcctcaagcccgaccttgtcgcccccggcgtcagcatcctcgccgcgtg 47285 Query: 70 gaccggcgaggcctcccccaccgacctcgagatcgacccgaggcgcgtcccgttcaacat 129 | ||||| | ||| || ||||| ||||| ||||| ||||||||||| ||||||||| Sbjct: 47286 gtccggcctcgtctcgccaaccgaactcgacgtcgacacgaggcgcgtcaagttcaacat 47345 Query: 130 catctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgc 182 | | ||||| || ||| |||||||||||||||||||| |||| ||||||| Sbjct: 47346 cttgtccggtacatccgccgcgtgcccgcacgtgagcggcgtcgctgcgctgc 47398 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 326 cacgtggaccccaacagcgcgctcaaccccgggctggtgtacgacgcggacaccgccgac 385 ||||| |||||||||| ||| ||| |||| || || |||||| |||| ||||| |||| Sbjct: 110514 cacgttgaccccaacaacgctctcgaccctggccttgtgtacaacgccaccaccgacgac 110455 Query: 386 tacatcggcttcctctgcg 404 ||||||| ||||||||||| Sbjct: 110454 tacatcgccttcctctgcg 110436 Score = 42.1 bits (21), Expect = 1.4 Identities = 48/57 (84%) Strand = Plus / Minus Query: 10 cgcggcggagatcctcaagcccgatgtcacagcccccggcgtcaacatactcgcggc 66 |||||| |||||||||||||| ||| | | ||| ||||| ||| |||| |||||||| Sbjct: 100155 cgcggctgagatcctcaagccggatatgatagcacccggtgtcgacatcctcgcggc 100099
>dbj|AK121728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082C22, full insert sequence Length = 2653 Score = 450 bits (227), Expect = e-123 Identities = 365/411 (88%) Strand = Plus / Plus Query: 4 ctaccgcgcggcggagatcctcaagcccgatgtcacagcccccggcgtcaacatactcgc 63 |||||||||| |||||||||||||||| || |||| ||||||||||||||||| ||||| Sbjct: 1591 ctaccgcgcgccggagatcctcaagccggacgtcattgcccccggcgtcaacatcctcgc 1650 Query: 64 ggcctggaccggcgaggcctcccccaccgacctcgagatcgacccgaggcgcgtcccgtt 123 ||| |||||||||||| | | |||||||||||||| ||||||||||||||||| ||| Sbjct: 1651 ggcgtggaccggcgagtctgcgcccaccgacctcgacatcgacccgaggcgcgtggagtt 1710 Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgct 183 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1711 caacatcatctccggcacgtccatgtcgtgcccgcacgtcagcggcctcgccgcgctgct 1770 Query: 184 ccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccacggc 243 ||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 1771 ccgccaggcgcaaccggactggagcccggcggcgatcaagtcggcgctcatgaccacggc 1830 Query: 244 gtacaacctggacaactccggggagatcatcaaggacctggccaccgggagccagtcgac 303 ||||||| ||||||||||| | | | |||||||||||||||| ||||||| | ||||||| Sbjct: 1831 gtacaacgtggacaactccagcgcggtcatcaaggacctggctaccgggaccgagtcgac 1890 Query: 304 gccgttcgtccgcggcgccgggcacgtggaccccaacagcgcgctcaaccccgggctggt 363 |||||||||||| |||||||| ||||| ||||||||| |||||||| |||| || || || Sbjct: 1891 gccgttcgtccgtggcgccggccacgtcgaccccaaccgcgcgctcgaccctggcctcgt 1950 Query: 364 gtacgacgcggacaccgccgactacatcggcttcctctgcgcgctcggcta 414 ||||||||| | |||| |||||| || |||||||||| |||||||||| Sbjct: 1951 gtacgacgccgggaccgaagactacgtctccttcctctgcacgctcggcta 2001
>dbj|AK106527.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F01, full insert sequence Length = 2648 Score = 450 bits (227), Expect = e-123 Identities = 365/411 (88%) Strand = Plus / Plus Query: 4 ctaccgcgcggcggagatcctcaagcccgatgtcacagcccccggcgtcaacatactcgc 63 |||||||||| |||||||||||||||| || |||| ||||||||||||||||| ||||| Sbjct: 1494 ctaccgcgcgccggagatcctcaagccggacgtcattgcccccggcgtcaacatcctcgc 1553 Query: 64 ggcctggaccggcgaggcctcccccaccgacctcgagatcgacccgaggcgcgtcccgtt 123 ||| |||||||||||| | | |||||||||||||| ||||||||||||||||| ||| Sbjct: 1554 ggcgtggaccggcgagtctgcgcccaccgacctcgacatcgacccgaggcgcgtggagtt 1613 Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgct 183 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1614 caacatcatctccggcacgtccatgtcgtgcccgcacgtcagcggcctcgccgcgctgct 1673 Query: 184 ccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccacggc 243 ||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 1674 ccgccaggcgcaaccggactggagcccggcggcgatcaagtcggcgctcatgaccacggc 1733 Query: 244 gtacaacctggacaactccggggagatcatcaaggacctggccaccgggagccagtcgac 303 ||||||| ||||||||||| | | | |||||||||||||||| ||||||| | ||||||| Sbjct: 1734 gtacaacgtggacaactccagcgcggtcatcaaggacctggctaccgggaccgagtcgac 1793 Query: 304 gccgttcgtccgcggcgccgggcacgtggaccccaacagcgcgctcaaccccgggctggt 363 |||||||||||| |||||||| ||||| ||||||||| |||||||| |||| || || || Sbjct: 1794 gccgttcgtccgtggcgccggccacgtcgaccccaaccgcgcgctcgaccctggcctcgt 1853 Query: 364 gtacgacgcggacaccgccgactacatcggcttcctctgcgcgctcggcta 414 ||||||||| | |||| |||||| || |||||||||| |||||||||| Sbjct: 1854 gtacgacgccgggaccgaagactacgtctccttcctctgcacgctcggcta 1904
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 143 bits (72), Expect = 5e-31 Identities = 114/128 (89%) Strand = Plus / Minus Query: 113 cgcgtcccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctc 172 |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 155657 cgcgtcgccttcaacatcatctccggcacgtccatgtcgtgcccgcacgtgagcggcctc 155598 Query: 173 gccgcgctgctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctc 232 ||||||||||| || ||||||||||| ||||||||||| || || |||||||||| Sbjct: 155597 gccgcgctgctgaggagcgcgcacccggagtggagccccgccgccgtgcggtcggcgctc 155538 Query: 233 atgaccac 240 |||||||| Sbjct: 155537 atgaccac 155530 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Minus Query: 376 caccgccgactacatcggcttcctctgcgcgctc 409 ||||||||||||| ||| |||||||||||||||| Sbjct: 155385 caccgccgactacgtcgacttcctctgcgcgctc 155352
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 143 bits (72), Expect = 5e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 113 cgcgtcccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctc 172 |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107736 cgcgtcgccttcaacatcatctccggcacgtccatgtcgtgcccgcacgtgagcggcctc 107795 Query: 173 gccgcgctgctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctc 232 ||||||||||| || ||||||||||| ||||||||||| || || |||||||||| Sbjct: 107796 gccgcgctgctgaggagcgcgcacccggagtggagccccgccgccgtgcggtcggcgctc 107855 Query: 233 atgaccac 240 |||||||| Sbjct: 107856 atgaccac 107863 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 376 caccgccgactacatcggcttcctctgcgcgctc 409 ||||||||||||| ||| |||||||||||||||| Sbjct: 108008 caccgccgactacgtcgacttcctctgcgcgctc 108041
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 143 bits (72), Expect = 5e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 113 cgcgtcccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctc 172 |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 22512489 cgcgtcgccttcaacatcatctccggcacgtccatgtcgtgcccgcacgtgagcggcctc 22512548 Query: 173 gccgcgctgctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctc 232 ||||||||||| || ||||||||||| ||||||||||| || || |||||||||| Sbjct: 22512549 gccgcgctgctgaggagcgcgcacccggagtggagccccgccgccgtgcggtcggcgctc 22512608 Query: 233 atgaccac 240 |||||||| Sbjct: 22512609 atgaccac 22512616 Score = 137 bits (69), Expect = 3e-29 Identities = 114/129 (88%) Strand = Plus / Minus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 31185056 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgggctggcggcgttg 31184997 Query: 182 ctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccacg 241 ||||| |||||||| |||||||||||| |||||| || |||||||| ||||||||| Sbjct: 31184996 ctccgcgcggcgcaccaggactggagcccggcggcgatccgctcggcgctgatgaccacg 31184937 Query: 242 gcgtacaac 250 |||||||| Sbjct: 31184936 tcgtacaac 31184928 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 376 caccgccgactacatcggcttcctctgcgcgctc 409 ||||||||||||| ||| |||||||||||||||| Sbjct: 22512761 caccgccgactacgtcgacttcctctgcgcgctc 22512794 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 132 tctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgct 180 |||| ||||| || ||| |||||||||||||||||||| |||| ||||| Sbjct: 2371169 tctcggggacatcaatggcgtgcccgcacgtgagcggcatcgcggcgct 2371217 Score = 46.1 bits (23), Expect = 0.092 Identities = 56/67 (83%) Strand = Plus / Minus Query: 121 gttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgct 180 |||||||||| | || || || || ||| |||||||||||| ||||||| ||| ||||| Sbjct: 7529877 gttcaacatcctgtcgggcacctcgatggcgtgcccgcacgcgagcggcgccgcggcgct 7529818 Query: 181 gctccgg 187 ||||||| Sbjct: 7529817 gctccgg 7529811 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 140 acgtccatgtcgtgcccgcacgt 162 ||||||||||||||||||||||| Sbjct: 3134218 acgtccatgtcgtgcccgcacgt 3134196 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 219 tcaagtcggcgctcatgaccacggcgtaca 248 ||||||||||||| ||||||||||| |||| Sbjct: 3134139 tcaagtcggcgctgatgaccacggcataca 3134110 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 129 tcatctccgggacgtccatgtcgtgcccgcacgtgagcggc 169 |||| ||||||||||||||| || |||||||| ||||||| Sbjct: 17866927 tcatatccgggacgtccatggcgaccccgcacgcgagcggc 17866967 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 41 gcccccggcgtcaacatactcgcggcctggaccggcg 77 ||||| ||||||||||| |||||||| ||||| |||| Sbjct: 7529957 gccccgggcgtcaacatcctcgcggcatggacgggcg 7529921 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 44 cccggcgtcaacatactcgcggcctggaccgg 75 |||||||||||||| |||||||| ||| |||| Sbjct: 31185134 cccggcgtcaacatcctcgcggcgtggtccgg 31185103 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 378 ccgccgactacatcggcttcctctgcgc 405 ||||||||||| ||| |||||||||||| Sbjct: 31184800 ccgccgactacgtcgacttcctctgcgc 31184773
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 143 bits (72), Expect = 5e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 113 cgcgtcccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctc 172 |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 22505518 cgcgtcgccttcaacatcatctccggcacgtccatgtcgtgcccgcacgtgagcggcctc 22505577 Query: 173 gccgcgctgctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctc 232 ||||||||||| || ||||||||||| ||||||||||| || || |||||||||| Sbjct: 22505578 gccgcgctgctgaggagcgcgcacccggagtggagccccgccgccgtgcggtcggcgctc 22505637 Query: 233 atgaccac 240 |||||||| Sbjct: 22505638 atgaccac 22505645 Score = 137 bits (69), Expect = 3e-29 Identities = 114/129 (88%) Strand = Plus / Minus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 31275579 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgggctggcggcgttg 31275520 Query: 182 ctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccacg 241 ||||| |||||||| |||||||||||| |||||| || |||||||| ||||||||| Sbjct: 31275519 ctccgcgcggcgcaccaggactggagcccggcggcgatccgctcggcgctgatgaccacg 31275460 Query: 242 gcgtacaac 250 |||||||| Sbjct: 31275459 tcgtacaac 31275451 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 376 caccgccgactacatcggcttcctctgcgcgctc 409 ||||||||||||| ||| |||||||||||||||| Sbjct: 22505790 caccgccgactacgtcgacttcctctgcgcgctc 22505823 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 132 tctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgct 180 |||| ||||| || ||| |||||||||||||||||||| |||| ||||| Sbjct: 2371279 tctcggggacatcaatggcgtgcccgcacgtgagcggcatcgcggcgct 2371327 Score = 46.1 bits (23), Expect = 0.092 Identities = 56/67 (83%) Strand = Plus / Minus Query: 121 gttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgct 180 |||||||||| | || || || || ||| |||||||||||| ||||||| ||| ||||| Sbjct: 7527712 gttcaacatcctgtcgggcacctcgatggcgtgcccgcacgcgagcggcgccgcggcgct 7527653 Query: 181 gctccgg 187 ||||||| Sbjct: 7527652 gctccgg 7527646 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 140 acgtccatgtcgtgcccgcacgt 162 ||||||||||||||||||||||| Sbjct: 3134329 acgtccatgtcgtgcccgcacgt 3134307 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 219 tcaagtcggcgctcatgaccacggcgtaca 248 ||||||||||||| ||||||||||| |||| Sbjct: 3134250 tcaagtcggcgctgatgaccacggcataca 3134221 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 129 tcatctccgggacgtccatgtcgtgcccgcacgtgagcggc 169 |||| ||||||||||||||| || |||||||| ||||||| Sbjct: 17860468 tcatatccgggacgtccatggcgaccccgcacgcgagcggc 17860508 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 41 gcccccggcgtcaacatactcgcggcctggaccggcg 77 ||||| ||||||||||| |||||||| ||||| |||| Sbjct: 7527792 gccccgggcgtcaacatcctcgcggcatggacgggcg 7527756 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 44 cccggcgtcaacatactcgcggcctggaccgg 75 |||||||||||||| |||||||| ||| |||| Sbjct: 31275657 cccggcgtcaacatcctcgcggcgtggtccgg 31275626 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 378 ccgccgactacatcggcttcctctgcgc 405 ||||||||||| ||| |||||||||||| Sbjct: 31275323 ccgccgactacgtcgacttcctctgcgc 31275296
>dbj|AK105749.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B09, full insert sequence Length = 2517 Score = 143 bits (72), Expect = 5e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 113 cgcgtcccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctc 172 |||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1622 cgcgtcgccttcaacatcatctccggcacgtccatgtcgtgcccgcacgtgagcggcctc 1681 Query: 173 gccgcgctgctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctc 232 ||||||||||| || ||||||||||| ||||||||||| || || |||||||||| Sbjct: 1682 gccgcgctgctgaggagcgcgcacccggagtggagccccgccgccgtgcggtcggcgctc 1741 Query: 233 atgaccac 240 |||||||| Sbjct: 1742 atgaccac 1749 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 376 caccgccgactacatcggcttcctctgcgcgctc 409 ||||||||||||| ||| |||||||||||||||| Sbjct: 1894 caccgccgactacgtcgacttcctctgcgcgctc 1927
>ref|XM_469861.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2568 Score = 137 bits (69), Expect = 3e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 1615 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgggctggcggcgttg 1674 Query: 182 ctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccacg 241 ||||| |||||||| |||||||||||| |||||| || |||||||| ||||||||| Sbjct: 1675 ctccgcgcggcgcaccaggactggagcccggcggcgatccgctcggcgctgatgaccacg 1734 Query: 242 gcgtacaac 250 |||||||| Sbjct: 1735 tcgtacaac 1743 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 378 ccgccgactacatcggcttcctctgcgc 405 ||||||||||| ||| |||||||||||| Sbjct: 1871 ccgccgactacgtcgacttcctctgcgc 1898 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 44 cccggcgtcaacatactcgcggcctggaccgg 75 |||||||||||||| |||||||| ||| |||| Sbjct: 1537 cccggcgtcaacatcctcgcggcgtggtccgg 1568
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence Length = 128017 Score = 137 bits (69), Expect = 3e-29 Identities = 114/129 (88%) Strand = Plus / Minus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 105697 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgggctggcggcgttg 105638 Query: 182 ctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccacg 241 ||||| |||||||| |||||||||||| |||||| || |||||||| ||||||||| Sbjct: 105637 ctccgcgcggcgcaccaggactggagcccggcggcgatccgctcggcgctgatgaccacg 105578 Query: 242 gcgtacaac 250 |||||||| Sbjct: 105577 tcgtacaac 105569 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 44 cccggcgtcaacatactcgcggcctggaccgg 75 |||||||||||||| |||||||| ||| |||| Sbjct: 105775 cccggcgtcaacatcctcgcggcgtggtccgg 105744 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 378 ccgccgactacatcggcttcctctgcgc 405 ||||||||||| ||| |||||||||||| Sbjct: 105441 ccgccgactacgtcgacttcctctgcgc 105414
>dbj|AK103255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123P12, full insert sequence Length = 2813 Score = 137 bits (69), Expect = 3e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 1863 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgggctggcggcgttg 1922 Query: 182 ctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccacg 241 ||||| |||||||| |||||||||||| |||||| || |||||||| ||||||||| Sbjct: 1923 ctccgcgcggcgcaccaggactggagcccggcggcgatccgctcggcgctgatgaccacg 1982 Query: 242 gcgtacaac 250 |||||||| Sbjct: 1983 tcgtacaac 1991 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 378 ccgccgactacatcggcttcctctgcgc 405 ||||||||||| ||| |||||||||||| Sbjct: 2119 ccgccgactacgtcgacttcctctgcgc 2146 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 44 cccggcgtcaacatactcgcggcctggaccgg 75 |||||||||||||| |||||||| ||| |||| Sbjct: 1785 cccggcgtcaacatcctcgcggcgtggtccgg 1816
>dbj|AK101646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055P14, full insert sequence Length = 2667 Score = 137 bits (69), Expect = 3e-29 Identities = 114/129 (88%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 1668 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgggctggcggcgttg 1727 Query: 182 ctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccacg 241 ||||| |||||||| |||||||||||| |||||| || |||||||| ||||||||| Sbjct: 1728 ctccgcgcggcgcaccaggactggagcccggcggcgatccgctcggcgctgatgaccacg 1787 Query: 242 gcgtacaac 250 |||||||| Sbjct: 1788 tcgtacaac 1796 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 378 ccgccgactacatcggcttcctctgcgc 405 ||||||||||| ||| |||||||||||| Sbjct: 1924 ccgccgactacgtcgacttcctctgcgc 1951 Score = 40.1 bits (20), Expect = 5.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 44 cccggcgtcaacatactcgcggcctggaccgg 75 |||||||||||||| |||||||| ||| |||| Sbjct: 1590 cccggcgtcaacatcctcgcggcgtggtccgg 1621
>gb|BT018407.1| Zea mays clone EL01N0326A09.d mRNA sequence Length = 1456 Score = 85.7 bits (43), Expect = 1e-13 Identities = 106/127 (83%) Strand = Plus / Plus Query: 121 gttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgct 180 |||||||||| | || || ||||||||| | |||||||||||| |||||||| ||||| Sbjct: 412 gttcaacatcctgtcgggcacgtccatggcctgcccgcacgtgtcgggcctcgcggcgct 471 Query: 181 gctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 ||| | |||||||||| |||||||||||||||| ||||||||||||| ||||| || Sbjct: 472 gctgaaggcggcgcacccgagctggagccccgcggcgatcaagtcggcgctgatgacgac 531 Query: 241 ggcgtac 247 |||||| Sbjct: 532 cgcgtac 538 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 ggcgccgggcacgtggaccc 336 |||||||||||||||||||| Sbjct: 608 ggcgccgggcacgtggaccc 627
>ref|XM_468097.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2073 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 110 aggcgcgtcccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggc 169 ||||||||| |||||||||||||||||| ||||||||| |||||| |||| |||||||| Sbjct: 1381 aggcgcgtcgagttcaacatcatctccggcacgtccatggcgtgcctgcacatgagcggc 1440 Query: 170 ctcgccgc 177 ||||||| Sbjct: 1441 atcgccgc 1448
>ref|XM_468102.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2624 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 101 atcgacccgaggcgcgtcccgttcaacatcatctccgggacgtccatgtcgtgcccgcac 160 |||||| ||||||| ||| ||||||||||||||| || ||||||||| ||||||| ||| Sbjct: 1700 atcgacacgaggcgtgtcgagttcaacatcatctctggcacgtccatggcgtgccctcac 1759 Query: 161 gtgagcggcctcgc 174 ||||||||| |||| Sbjct: 1760 gtgagcggcatcgc 1773 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 326 cacgtggaccccaacagcgcgctcaaccccgggctggtgtacgacgcggacaccgccgac 385 ||||| |||||||||| ||| ||| |||| || || |||||| |||| ||||| |||| Sbjct: 1925 cacgttgaccccaacaacgctctcgaccctggccttgtgtacaacgccaccaccgacgac 1984 Query: 386 tacatcggcttcctctgcg 404 ||||||| ||||||||||| Sbjct: 1985 tacatcgccttcctctgcg 2003
>dbj|AK070669.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058P11, full insert sequence Length = 2624 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 101 atcgacccgaggcgcgtcccgttcaacatcatctccgggacgtccatgtcgtgcccgcac 160 |||||| ||||||| ||| ||||||||||||||| || ||||||||| ||||||| ||| Sbjct: 1699 atcgacacgaggcgtgtcgagttcaacatcatctctggcacgtccatggcgtgccctcac 1758 Query: 161 gtgagcggcctcgc 174 ||||||||| |||| Sbjct: 1759 gtgagcggcatcgc 1772 Score = 54.0 bits (27), Expect = 4e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 326 cacgtggaccccaacagcgcgctcaaccccgggctggtgtacgacgcggacaccgccgac 385 ||||| |||||||||| ||| ||| |||| || || |||||| |||| ||||| |||| Sbjct: 1924 cacgttgaccccaacaacgctctcgaccctggccttgtgtacaacgccaccaccgacgac 1983 Query: 386 tacatcggcttcctctgcg 404 ||||||| ||||||||||| Sbjct: 1984 tacatcgccttcctctgcg 2002
>ref|XM_482713.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1018 Score = 69.9 bits (35), Expect = 6e-09 Identities = 98/119 (82%) Strand = Plus / Minus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||| |||| || ||||||||| | ||||||||| | |||||||||||| || Sbjct: 1000 ttcaacatcctctcgggcacgtccatggcttgcccgcacatctccggcctcgccgcattg 941 Query: 182 ctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 ||| | |||||| || |||||||||||||||| ||||||| |||||||||||||| Sbjct: 940 ctcaaggcggcgcatcctacctggagccccgcggcgatcaagtcagcgctcatgaccac 882
>ref|XM_482712.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2391 Score = 69.9 bits (35), Expect = 6e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||| |||| || ||||||||| | ||||||||| | |||||||||||| || Sbjct: 1675 ttcaacatcctctcgggcacgtccatggcttgcccgcacatctccggcctcgccgcattg 1734 Query: 182 ctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 ||| | |||||| || |||||||||||||||| ||||||| |||||||||||||| Sbjct: 1735 ctcaaggcggcgcatcctacctggagccccgcggcgatcaagtcagcgctcatgaccac 1793
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 69.9 bits (35), Expect = 6e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||| |||| || ||||||||| | ||||||||| | |||||||||||| || Sbjct: 22105577 ttcaacatcctctcgggcacgtccatggcttgcccgcacatctccggcctcgccgcattg 22105636 Query: 182 ctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 ||| | |||||| || |||||||||||||||| ||||||| |||||||||||||| Sbjct: 22105637 ctcaaggcggcgcatcctacctggagccccgcggcgatcaagtcagcgctcatgaccac 22105695
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 69.9 bits (35), Expect = 6e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||| |||| || ||||||||| | ||||||||| | |||||||||||| || Sbjct: 68540 ttcaacatcctctcgggcacgtccatggcttgcccgcacatctccggcctcgccgcattg 68599 Query: 182 ctccggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 ||| | |||||| || |||||||||||||||| ||||||| |||||||||||||| Sbjct: 68600 ctcaaggcggcgcatcctacctggagccccgcggcgatcaagtcagcgctcatgaccac 68658
>gb|BT024067.1| Zea mays clone EL01N0448C11 mRNA sequence Length = 2351 Score = 69.9 bits (35), Expect = 6e-09 Identities = 106/127 (83%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||| | || |||||||||||||||||||||||||| |||| | || |||||| Sbjct: 1435 ttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggctgcgctg 1494 Query: 182 ctcc-ggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 || ||| || ||||||||||||||||||||| | ||||||| ||||| |||||||| Sbjct: 1495 atcaaggccagc-cacccggactggagccccgcgaagatcaagtccgcgctgatgaccac 1553 Query: 241 ggcgtac 247 |||||| Sbjct: 1554 cgcgtac 1560 Score = 46.1 bits (23), Expect = 0.092 Identities = 53/63 (84%) Strand = Plus / Plus Query: 16 ggagatcctcaagcccgatgtcacagcccccggcgtcaacatactcgcggcctggaccgg 75 ||||||||||||||| ||||||| || |||||||| ||||| | ||||| |||| ||| Sbjct: 1329 ggagatcctcaagccggatgtcatcgcgcccggcgtgaacatcttggcggcatggagcgg 1388 Query: 76 cga 78 ||| Sbjct: 1389 cga 1391
>gb|AY107161.1| Zea mays PCO101731 mRNA sequence Length = 1572 Score = 69.9 bits (35), Expect = 6e-09 Identities = 106/127 (83%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||| | || |||||||||||||||||||||||||| |||| | || |||||| Sbjct: 880 ttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggctgcgctg 939 Query: 182 ctcc-ggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 || ||| || ||||||||||||||||||||| | ||||||| ||||| |||||||| Sbjct: 940 atcaaggccagc-cacccggactggagccccgcgaagatcaagtccgcgctgatgaccac 998 Query: 241 ggcgtac 247 |||||| Sbjct: 999 cgcgtac 1005 Score = 46.1 bits (23), Expect = 0.092 Identities = 53/63 (84%) Strand = Plus / Plus Query: 16 ggagatcctcaagcccgatgtcacagcccccggcgtcaacatactcgcggcctggaccgg 75 ||||||||||||||| ||||||| || |||||||| ||||| | ||||| |||| ||| Sbjct: 774 ggagatcctcaagccggatgtcatcgcgcccggcgtgaacatcttggcggcatggagcgg 833 Query: 76 cga 78 ||| Sbjct: 834 cga 836
>ref|XM_475298.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2286 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacg 161 |||||| |||||||||| |||||||||||||||||||||| Sbjct: 1582 ttcaacgtcatctccggcacgtccatgtcgtgcccgcacg 1621
>ref|XM_464493.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2610 Score = 63.9 bits (32), Expect = 4e-07 Identities = 91/108 (84%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 134 tccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcaggc- 192 ||||||||||||||||||||||||||||| |||| ||| || ||||||| ||| || Sbjct: 1770 tccgggacgtccatgtcgtgcccgcacgtcgccggcgtcgtcggcctgctcc-gcacgct 1828 Query: 193 gcacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 || ||| |||||||||||||||||| || || |||||||||||||| Sbjct: 1829 gcgccccgactggagccccgcggcgatccgctccgcgctcatgaccac 1876
>ref|XM_464494.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1408 Score = 63.9 bits (32), Expect = 4e-07 Identities = 91/108 (84%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 134 tccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcaggc- 192 ||||||||||||||||||||||||||||| |||| ||| || ||||||| ||| || Sbjct: 566 tccgggacgtccatgtcgtgcccgcacgtcgccggcgtcgtcggcctgctcc-gcacgct 624 Query: 193 gcacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 || ||| |||||||||||||||||| || || |||||||||||||| Sbjct: 625 gcgccccgactggagccccgcggcgatccgctccgcgctcatgaccac 672
>ref|XM_473575.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2331 Score = 63.9 bits (32), Expect = 4e-07 Identities = 106/128 (82%), Gaps = 2/128 (1%) Strand = Plus / Plus Query: 121 gttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgct 180 |||||||||| | || |||||||||||||||||||||||||| |||| | |||||||| Sbjct: 1650 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 1709 Query: 181 gctc-cggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgacca 239 | || ||| || ||||||||||||||||| || | ||||||| ||||| ||||||| Sbjct: 1710 gatcaaggcgagc-cacccggactggagcccagcacagatcaagtccgcgctgatgacca 1768 Query: 240 cggcgtac 247 | |||||| Sbjct: 1769 ccgcgtac 1776
>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0088F07, complete sequence Length = 139180 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacg 161 |||||| |||||||||| |||||||||||||||||||||| Sbjct: 63200 ttcaacgtcatctccggcacgtccatgtcgtgcccgcacg 63161
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 63.9 bits (32), Expect = 4e-07 Identities = 106/128 (82%), Gaps = 2/128 (1%) Strand = Plus / Minus Query: 121 gttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgct 180 |||||||||| | || |||||||||||||||||||||||||| |||| | |||||||| Sbjct: 28852933 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 28852874 Query: 181 gctc-cggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgacca 239 | || ||| || ||||||||||||||||| || | ||||||| ||||| ||||||| Sbjct: 28852873 gatcaaggcgagc-cacccggactggagcccagcacagatcaagtccgcgctgatgacca 28852815 Query: 240 cggcgtac 247 | |||||| Sbjct: 28852814 ccgcgtac 28852807 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 132 tctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcagg 191 ||||||| ||||||||| ||| |||||||| |||| | || |||||||||||| || Sbjct: 21368934 tctccggcacgtccatggcgtcgccgcacgtcgccggcgtggcggcgctgctccggtcgg 21368993 Query: 192 cgcacccggactggagccc 210 ||||||||||||||||||| Sbjct: 21368994 cgcacccggactggagccc 21369012 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 122 ttcaacatcatctccgggacgtccatgtcg 151 |||||||||||||||||||| ||||||||| Sbjct: 27975583 ttcaacatcatctccgggacatccatgtcg 27975554
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacg 161 |||||| |||||||||| |||||||||||||||||||||| Sbjct: 21182417 ttcaacgtcatctccggcacgtccatgtcgtgcccgcacg 21182378 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cggcctcgccgcgctgctcc 185 |||||||||||||||||||| Sbjct: 15731691 cggcctcgccgcgctgctcc 15731710
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 63.9 bits (32), Expect = 4e-07 Identities = 91/108 (84%), Gaps = 2/108 (1%) Strand = Plus / Minus Query: 134 tccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcaggc- 192 ||||||||||||||||||||||||||||| |||| ||| || ||||||| ||| || Sbjct: 75593 tccgggacgtccatgtcgtgcccgcacgtcgccggcgtcgtcggcctgctcc-gcacgct 75535 Query: 193 gcacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 || ||| |||||||||||||||||| || || |||||||||||||| Sbjct: 75534 gcgccccgactggagccccgcggcgatccgctccgcgctcatgaccac 75487
>dbj|AK110251.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-H04, full insert sequence Length = 3493 Score = 63.9 bits (32), Expect = 4e-07 Identities = 106/128 (82%), Gaps = 2/128 (1%) Strand = Plus / Minus Query: 121 gttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgct 180 |||||||||| | || |||||||||||||||||||||||||| |||| | |||||||| Sbjct: 1576 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 1517 Query: 181 gctc-cggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgacca 239 | || ||| || ||||||||||||||||| || | ||||||| ||||| ||||||| Sbjct: 1516 gatcaaggcgagc-cacccggactggagcccagcacagatcaagtccgcgctgatgacca 1458 Query: 240 cggcgtac 247 | |||||| Sbjct: 1457 ccgcgtac 1450
>dbj|AK110034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-B01, full insert sequence Length = 3486 Score = 63.9 bits (32), Expect = 4e-07 Identities = 106/128 (82%), Gaps = 2/128 (1%) Strand = Plus / Minus Query: 121 gttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgct 180 |||||||||| | || |||||||||||||||||||||||||| |||| | |||||||| Sbjct: 833 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 774 Query: 181 gctc-cggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgacca 239 | || ||| || ||||||||||||||||| || | ||||||| ||||| ||||||| Sbjct: 773 gatcaaggcgagc-cacccggactggagcccagcacagatcaagtccgcgctgatgacca 715 Query: 240 cggcgtac 247 | |||||| Sbjct: 714 ccgcgtac 707
>dbj|AK106394.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-F05, full insert sequence Length = 1408 Score = 63.9 bits (32), Expect = 4e-07 Identities = 91/108 (84%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 134 tccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcaggc- 192 ||||||||||||||||||||||||||||| |||| ||| || ||||||| ||| || Sbjct: 566 tccgggacgtccatgtcgtgcccgcacgtcgccggcgtcgtcggcctgctcc-gcacgct 624 Query: 193 gcacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 || ||| |||||||||||||||||| || || |||||||||||||| Sbjct: 625 gcgccccgactggagccccgcggcgatccgctccgcgctcatgaccac 672
>dbj|AK067138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096L15, full insert sequence Length = 2549 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacg 161 |||||| |||||||||| |||||||||||||||||||||| Sbjct: 1635 ttcaacgtcatctccggcacgtccatgtcgtgcccgcacg 1674
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 63.9 bits (32), Expect = 4e-07 Identities = 106/128 (82%), Gaps = 2/128 (1%) Strand = Plus / Minus Query: 121 gttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgct 180 |||||||||| | || |||||||||||||||||||||||||| |||| | |||||||| Sbjct: 64995 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 64936 Query: 181 gctc-cggcaggcgcacccggactggagccccgcggcggtcaagtcggcgctcatgacca 239 | || ||| || ||||||||||||||||| || | ||||||| ||||| ||||||| Sbjct: 64935 gatcaaggcgagc-cacccggactggagcccagcacagatcaagtccgcgctgatgacca 64877 Query: 240 cggcgtac 247 | |||||| Sbjct: 64876 ccgcgtac 64869
>ref|XM_472541.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2331 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 132 tctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcagg 191 ||||||| ||||||||| ||| |||||||| |||| | || |||||||||||| || Sbjct: 1631 tctccggcacgtccatggcgtcgccgcacgtcgccggcgtggcggcgctgctccggtcgg 1690 Query: 192 cgcacccggactggagccc 210 ||||||||||||||||||| Sbjct: 1691 cgcacccggactggagccc 1709
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 132 tctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcagg 191 ||||||| ||||||||| ||| |||||||| |||| | || |||||||||||| || Sbjct: 18684 tctccggcacgtccatggcgtcgccgcacgtcgccggcgtggcggcgctgctccggtcgg 18743 Query: 192 cgcacccggactggagccc 210 ||||||||||||||||||| Sbjct: 18744 cgcacccggactggagccc 18762
>dbj|AK105112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G01, full insert sequence Length = 2571 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 132 tctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcagg 191 ||||||| ||||||||| ||| |||||||| |||| | || |||||||||||| || Sbjct: 1645 tctccggcacgtccatggcgtcgccgcacgtcgccggcgtggcggcgctgctccggtcgg 1704 Query: 192 cgcacccggactggagccc 210 ||||||||||||||||||| Sbjct: 1705 cgcacccggactggagccc 1723
>dbj|AK100150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015F12, full insert sequence Length = 999 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 202 ctggagccccgcggcggtcaagtcggcgctcatgaccac 240 |||||||||||||||| ||||||| |||||||||||||| Sbjct: 905 ctggagccccgcggcgatcaagtcagcgctcatgaccac 867
>ref|NM_190776.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2283 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 119 ccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcg 178 |||||||||||||||||||||||||| ||| || ||||||| | ||| |||| ||| Sbjct: 1564 ccgttcaacatcatctccgggacgtcgatggcgacgccgcacgcggcgggcgtcgcggcg 1623 Query: 179 ctgctccggcaggcgcacccggactggagccccgcggc 216 |||||| || || ||||||||| |||||||| ||||| Sbjct: 1624 ctgctcagggcggtgcacccggagtggagcccggcggc 1661
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 143 tccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcaggcgcacccggac 202 |||||||| ||||||||| | |||||||||||||| | || | ||| ||||||||| Sbjct: 16304187 tccatgtcatgcccgcacatcagcggcctcgccgccttcgtcaaggcggcacacccggac 16304246 Query: 203 tggagccccgcggcggtcaagtcggcgctcatgaccac 240 ||||||||| || |||||||||||||||||||||| Sbjct: 16304247 tggagccccagcgcaatcaagtcggcgctcatgaccac 16304284 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 383 gactacatcggcttcctctgcgcgctcggcta 414 |||||| ||||||||||||||||||| ||||| Sbjct: 18367348 gactacctcggcttcctctgcgcgctgggcta 18367379
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 119 ccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcg 178 |||||||||||||||||||||||||| ||| || ||||||| | ||| |||| ||| Sbjct: 37646706 ccgttcaacatcatctccgggacgtcgatggcgacgccgcacgcggcgggcgtcgcggcg 37646765 Query: 179 ctgctccggcaggcgcacccggactggagccccgcggc 216 |||||| || || ||||||||| |||||||| ||||| Sbjct: 37646766 ctgctcagggcggtgcacccggagtggagcccggcggc 37646803 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgt 162 ||||||||| || ||||| |||||||||||||||||||| Sbjct: 30338327 caacatcatgtcggggacatccatgtcgtgcccgcacgt 30338289 Score = 46.1 bits (23), Expect = 0.092 Identities = 86/107 (80%) Strand = Plus / Plus Query: 134 tccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcaggcg 193 ||||||||||| ||| |||||||||||| |||| | || || |||| ||| |||| Sbjct: 37641892 tccgggacgtcgatggcgtgcccgcacgccgccggcgtggcggcattgctgcgggcggcg 37641951 Query: 194 cacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 ||||||||||||||||| || | ||||||||||| | |||||||| Sbjct: 37641952 cacccggactggagcccggccatgatcaagtcggcgatgatgaccac 37641998 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 195 acccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 |||| ||||||| ||||||| | ||||||||||| |||||||||| Sbjct: 29101258 accccgactggacccccgcgatgatcaagtcggcgatcatgaccac 29101303 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtg 163 |||||| || ||||| || |||||||||||||| |||||| Sbjct: 29101187 caacataatgtccggcacctccatgtcgtgccctcacgtg 29101226
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 119 ccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcg 178 |||||||||||||||||||||||||| ||| || ||||||| | ||| |||| ||| Sbjct: 107180 ccgttcaacatcatctccgggacgtcgatggcgacgccgcacgcggcgggcgtcgcggcg 107239 Query: 179 ctgctccggcaggcgcacccggactggagccccgcggc 216 |||||| || || ||||||||| |||||||| ||||| Sbjct: 107240 ctgctcagggcggtgcacccggagtggagcccggcggc 107277 Score = 46.1 bits (23), Expect = 0.092 Identities = 86/107 (80%) Strand = Plus / Plus Query: 134 tccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcaggcg 193 ||||||||||| ||| |||||||||||| |||| | || || |||| ||| |||| Sbjct: 102366 tccgggacgtcgatggcgtgcccgcacgccgccggcgtggcggcattgctgcgggcggcg 102425 Query: 194 cacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 ||||||||||||||||| || | ||||||||||| | |||||||| Sbjct: 102426 cacccggactggagcccggccatgatcaagtcggcgatgatgaccac 102472
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 143 tccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcaggcgcacccggac 202 |||||||| ||||||||| | |||||||||||||| | || | ||| ||||||||| Sbjct: 120703 tccatgtcatgcccgcacatcagcggcctcgccgccttcgtcaaggcggcacacccggac 120762 Query: 203 tggagccccgcggcggtcaagtcggcgctcatgaccac 240 ||||||||| || |||||||||||||||||||||| Sbjct: 120763 tggagccccagcgcaatcaagtcggcgctcatgaccac 120800
>dbj|AK099470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023O14, full insert sequence Length = 2549 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 119 ccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcg 178 |||||||||||||||||||||||||| ||| || ||||||| | ||| |||| ||| Sbjct: 1615 ccgttcaacatcatctccgggacgtcgatggcgacgccgcacgcggcgggcgtcgcggcg 1674 Query: 179 ctgctccggcaggcgcacccggactggagccccgcggc 216 |||||| || || ||||||||| |||||||| ||||| Sbjct: 1675 ctgctcagggcggtgcacccggagtggagcccggcggc 1712
>dbj|AK099469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023O13, full insert sequence Length = 2549 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 119 ccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcg 178 |||||||||||||||||||||||||| ||| || ||||||| | ||| |||| ||| Sbjct: 1615 ccgttcaacatcatctccgggacgtcgatggcgacgccgcacgcggcgggcgtcgcggcg 1674 Query: 179 ctgctccggcaggcgcacccggactggagccccgcggc 216 |||||| || || ||||||||| |||||||| ||||| Sbjct: 1675 ctgctcagggcggtgcacccggagtggagcccggcggc 1712
>dbj|AK062271.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-A07, full insert sequence Length = 1704 Score = 60.0 bits (30), Expect = 6e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 119 ccgttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcg 178 |||||||||||||||||||||||||| ||| || ||||||| | ||| |||| ||| Sbjct: 866 ccgttcaacatcatctccgggacgtcgatggcgacgccgcacgcggcgggcgtcgcggcg 925 Query: 179 ctgctccggcaggcgcacccggactggagccccgcggc 216 |||||| || || ||||||||| |||||||| ||||| Sbjct: 926 ctgctcagggcggtgcacccggagtggagcccggcggc 963
>ref|NM_112261.2| Arabidopsis thaliana peptidase/ subtilase AT3G14067 mRNA, complete cds Length = 2334 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||||||||||| || || ||||||||||| ||||| || || |||||||| || Sbjct: 1615 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 1674 Query: 182 ctccg 186 ||||| Sbjct: 1675 ctccg 1679
>gb|BT011692.1| Arabidopsis thaliana At3g14067 gene, complete cds Length = 2503 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||||||||||| || || ||||||||||| ||||| || || |||||||| || Sbjct: 1643 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 1702 Query: 182 ctccg 186 ||||| Sbjct: 1703 ctccg 1707
>gb|BT012275.1| Arabidopsis thaliana At3g14067 gene, complete cds Length = 2334 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||||||||||| || || ||||||||||| ||||| || || |||||||| || Sbjct: 1615 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 1674 Query: 182 ctccg 186 ||||| Sbjct: 1675 ctccg 1679
>emb|BX842380.1|CNS0A4W3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH85ZE01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2472 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||||||||||| || || ||||||||||| ||||| || || |||||||| || Sbjct: 1620 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 1679 Query: 182 ctccg 186 ||||| Sbjct: 1680 ctccg 1684
>dbj|AP000600.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MAG2 Length = 73859 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctg 181 ||||||||||||||||| || || ||||||||||| ||||| || || |||||||| || Sbjct: 156 ttcaacatcatctccggtacatcgatgtcgtgcccacacgttagtggactcgccgctctc 97 Query: 182 ctccg 186 ||||| Sbjct: 96 ctccg 92
>ref|NM_197437.1| Oryza sativa (japonica cultivar-group) putative serine protease (OSJNBa0096G08.24), mRNA Length = 2359 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 194 cacccggactggagccccgcggcggtcaagtcggcgctcatgac 237 |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 1684 cacccggactggtcccccgcggcgatcaagtcggcgatcatgac 1727
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 194 cacccggactggagccccgcggcggtcaagtcggcgctcatgac 237 |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 132349 cacccggactggtcccccgcggcgatcaagtcggcgatcatgac 132306
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 194 cacccggactggagccccgcggcggtcaagtcggcgctcatgac 237 |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 19871311 cacccggactggtcccccgcggcgatcaagtcggcgatcatgac 19871268
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 194 cacccggactggagccccgcggcggtcaagtcggcgctcatgac 237 |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 114732 cacccggactggtcccccgcggcgatcaagtcggcgatcatgac 114775
>dbj|AK069238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012B10, full insert sequence Length = 2542 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 194 cacccggactggagccccgcggcggtcaagtcggcgctcatgac 237 |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 1702 cacccggactggtcccccgcggcgatcaagtcggcgatcatgac 1745
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 194 cacccggactggagccccgcggcggtcaagtcggcgctcatgac 237 |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 19882587 cacccggactggtcccccgcggcgatcaagtcggcgatcatgac 19882544
>ref|NM_191858.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2337 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgt 162 ||||||||| || ||||| |||||||||||||||||||| Sbjct: 1683 caacatcatgtcggggacatccatgtcgtgcccgcacgt 1721
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgt 162 ||||||||| || ||||| |||||||||||||||||||| Sbjct: 126646 caacatcatgtcggggacatccatgtcgtgcccgcacgt 126608
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgt 162 ||||||||| || ||||| |||||||||||||||||||| Sbjct: 24054 caacatcatgtcggggacatccatgtcgtgcccgcacgt 24016
>dbj|AK108195.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C06, full insert sequence Length = 1307 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgt 162 ||||||||| || ||||| |||||||||||||||||||| Sbjct: 511 caacatcatgtcggggacatccatgtcgtgcccgcacgt 549
>ref|XM_473476.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2283 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcg 151 |||||||||||||||||||| ||||||||| Sbjct: 1609 ttcaacatcatctccgggacatccatgtcg 1638
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17, complete sequence Length = 167269 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 122 ttcaacatcatctccgggacgtccatgtcg 151 |||||||||||||||||||| ||||||||| Sbjct: 138436 ttcaacatcatctccgggacatccatgtcg 138407
>gb|BT013603.1| Lycopersicon esculentum clone 132370R, mRNA sequence Length = 2481 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 121 gttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggc 169 ||||||||| ||||| || || ||||||||||| || |||||||||||| Sbjct: 1635 gttcaacattatctcaggcacatccatgtcgtgtccacacgtgagcggc 1683
>gb|DQ429395.1| Sorghum propinquum locus pSB0925 genomic sequence Length = 633 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 253 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 297
>gb|DQ429394.1| Sorghum bicolor voucher PI585454 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429393.1| Sorghum bicolor voucher PI267539 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429392.1| Sorghum bicolor voucher PI267408 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429391.1| Sorghum bicolor voucher PI221607 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429390.1| Sorghum bicolor voucher PI152702 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429389.1| Sorghum bicolor voucher NSL92371 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429388.1| Sorghum bicolor voucher NSL87902 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429387.1| Sorghum bicolor voucher NSL87666 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429386.1| Sorghum bicolor voucher NSL77217 locus pSB0925 genomic sequence Length = 633 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 253 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 297
>gb|DQ429385.1| Sorghum bicolor voucher NSL77034 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429384.1| Sorghum bicolor voucher NSL56174 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429383.1| Sorghum bicolor voucher NSL56003 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429382.1| Sorghum bicolor voucher NSL55243 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429381.1| Sorghum bicolor voucher NSL51365 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429380.1| Sorghum bicolor voucher NSL51030 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|DQ429379.1| Sorghum bicolor voucher NSL50875 locus pSB0925 genomic sequence Length = 632 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtgagcgg 168 ||||||||||||||| || |||||| ||||||| |||| |||||| Sbjct: 252 caacatcatctccggcacatccatggcgtgcccacacgcgagcgg 296
>gb|AC122149.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0083D24, complete sequence Length = 150503 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 132 tctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgct 180 |||| ||||| || ||| |||||||||||||||||||| |||| ||||| Sbjct: 88011 tctcggggacatcaatggcgtgcccgcacgtgagcggcatcgcggcgct 88059
>gb|AY105082.1| Zea mays PCO152725 mRNA sequence Length = 857 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Plus Query: 351 accccgggctggtgtacgacgcggacaccgccgactacatcggcttcctctgcgcgctcg 410 |||| ||||||||||||||||| | | ||| |||||| ||| |||||||||| |||||| Sbjct: 17 acccagggctggtgtacgacgccggctccgacgactatgtcgccttcctctgcacgctcg 76 Query: 411 g 411 | Sbjct: 77 g 77
>ref|XM_478847.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2445 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacg 161 ||||||||| |||| ||||| |||||| |||||||||||| Sbjct: 1639 ttcaacatcctctcggggacatccatggcgtgcccgcacg 1678
>ref|XM_476664.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1248 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 370 cgcggacaccgccgactacatcggcttc 397 ||||| |||||||||||||||||||||| Sbjct: 672 cgcggccaccgccgactacatcggcttc 699
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacg 161 ||||||||| |||| ||||| |||||| |||||||||||| Sbjct: 23346268 ttcaacatcctctcggggacatccatggcgtgcccgcacg 23346307 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 370 cgcggacaccgccgactacatcggcttc 397 ||||| |||||||||||||||||||||| Sbjct: 2784357 cgcggccaccgccgactacatcggcttc 2784384
>dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1199_H01 Length = 107252 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacg 161 ||||||||| |||| ||||| |||||| |||||||||||| Sbjct: 27492 ttcaacatcctctcggggacatccatggcgtgcccgcacg 27531
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacg 161 ||||||||| |||| ||||| |||||| |||||||||||| Sbjct: 101526 ttcaacatcctctcggggacatccatggcgtgcccgcacg 101565
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 383 gactacatcggcttcctctgcgcgctcggcta 414 |||||| ||||||||||||||||||| ||||| Sbjct: 82084 gactacctcggcttcctctgcgcgctgggcta 82115
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Plus Query: 383 gactacatcggcttcctctgcgcgctcggcta 414 |||||| ||||||||||||||||||| ||||| Sbjct: 29222 gactacctcggcttcctctgcgcgctgggcta 29253
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 370 cgcggacaccgccgactacatcggcttc 397 ||||| |||||||||||||||||||||| Sbjct: 87918 cgcggccaccgccgactacatcggcttc 87945
>dbj|AK107610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-C05, full insert sequence Length = 2445 Score = 48.1 bits (24), Expect = 0.023 Identities = 36/40 (90%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgcccgcacg 161 ||||||||| |||| ||||| |||||| |||||||||||| Sbjct: 1639 ttcaacatcctctcggggacatccatggcgtgcccgcacg 1678
>dbj|AP003704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1048_C10 Length = 99194 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 370 cgcggacaccgccgactacatcggcttc 397 ||||| |||||||||||||||||||||| Sbjct: 91368 cgcggccaccgccgactacatcggcttc 91395
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 156 cgcacgtgagcggcctcgccgcgc 179 |||||||||||||||||||||||| Sbjct: 1726123 cgcacgtgagcggcctcgccgcgc 1726100
>ref|NM_196315.1| Oryza sativa (japonica cultivar-group) putative cucumisin-like serine protease (OSJNBa0011L09.20), mRNA Length = 2322 Score = 46.1 bits (23), Expect = 0.092 Identities = 32/35 (91%) Strand = Plus / Plus Query: 122 ttcaacatcatctccgggacgtccatgtcgtgccc 156 ||||||||||||||||| || || ||||||||||| Sbjct: 1645 ttcaacatcatctccggtacatcgatgtcgtgccc 1679
>ref|NM_190775.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2262 Score = 46.1 bits (23), Expect = 0.092 Identities = 86/107 (80%) Strand = Plus / Plus Query: 134 tccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgctgctccggcaggcg 193 ||||||||||| ||| |||||||||||| |||| | || || |||| ||| |||| Sbjct: 1615 tccgggacgtcgatggcgtgcccgcacgccgccggcgtggcggcattgctgcgggcggcg 1674 Query: 194 cacccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 ||||||||||||||||| || | ||||||||||| | |||||||| Sbjct: 1675 cacccggactggagcccggccatgatcaagtcggcgatgatgaccac 1721
>ref|XM_470262.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1992 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 140 acgtccatgtcgtgcccgcacgt 162 ||||||||||||||||||||||| Sbjct: 1231 acgtccatgtcgtgcccgcacgt 1253 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 219 tcaagtcggcgctcatgaccacggcgtaca 248 ||||||||||||| ||||||||||| |||| Sbjct: 1310 tcaagtcggcgctgatgaccacggcataca 1339
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 140 acgtccatgtcgtgcccgcacgt 162 ||||||||||||||||||||||| Sbjct: 57231 acgtccatgtcgtgcccgcacgt 57209 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 219 tcaagtcggcgctcatgaccacggcgtaca 248 ||||||||||||| ||||||||||| |||| Sbjct: 57152 tcaagtcggcgctgatgaccacggcataca 57123
>gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0042A11, complete sequence Length = 113049 Score = 46.1 bits (23), Expect = 0.092 Identities = 56/67 (83%) Strand = Plus / Minus Query: 121 gttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgagcggcctcgccgcgct 180 |||||||||| | || || || || ||| |||||||||||| ||||||| ||| ||||| Sbjct: 58773 gttcaacatcctgtcgggcacctcgatggcgtgcccgcacgcgagcggcgccgcggcgct 58714 Query: 181 gctccgg 187 ||||||| Sbjct: 58713 gctccgg 58707 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Minus Query: 41 gcccccggcgtcaacatactcgcggcctggaccggcg 77 ||||| ||||||||||| |||||||| ||||| |||| Sbjct: 58853 gccccgggcgtcaacatcctcgcggcatggacgggcg 58817
>dbj|AK108516.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-A10, full insert sequence Length = 1078 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 140 acgtccatgtcgtgcccgcacgt 162 ||||||||||||||||||||||| Sbjct: 770 acgtccatgtcgtgcccgcacgt 748 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Minus Query: 219 tcaagtcggcgctcatgaccacggcgtaca 248 ||||||||||||| ||||||||||| |||| Sbjct: 691 tcaagtcggcgctgatgaccacggcataca 662
>dbj|AK071242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084K04, full insert sequence Length = 1153 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 140 acgtccatgtcgtgcccgcacgt 162 ||||||||||||||||||||||| Sbjct: 125 acgtccatgtcgtgcccgcacgt 147 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 219 tcaagtcggcgctcatgaccacggcgtaca 248 ||||||||||||| ||||||||||| |||| Sbjct: 204 tcaagtcggcgctgatgaccacggcataca 233
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Plus Query: 162 tgagcggcctcgccgcgctgctc 184 ||||||||||||||||||||||| Sbjct: 768453 tgagcggcctcgccgcgctgctc 768475
>ref|NM_192217.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2274 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 195 acccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 |||| ||||||| ||||||| | ||||||||||| |||||||||| Sbjct: 1637 accccgactggacccccgcgatgatcaagtcggcgatcatgaccac 1682 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtg 163 |||||| || ||||| || |||||||||||||| |||||| Sbjct: 1566 caacataatgtccggcacctccatgtcgtgccctcacgtg 1605
>gb|AC133931.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013M05 map C3, complete sequence Length = 131117 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 cctcgccgcgctgctccggcaggcgc 194 |||||||||||||||||| ||||||| Sbjct: 33727 cctcgccgcgctgctccgccaggcgc 33752
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 cctcgccgcgctgctccggcaggcgc 194 |||||||||||||||||| ||||||| Sbjct: 13449168 cctcgccgcgctgctccgccaggcgc 13449193
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 ctcgcggcctggaccggcgagg 80 |||||||||||||||||||||| Sbjct: 3853650 ctcgcggcctggaccggcgagg 3853671 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cggcgccgggcacgtggacc 335 |||||||||||||||||||| Sbjct: 4020245 cggcgccgggcacgtggacc 4020226
>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047E11 Length = 148109 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 195 acccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 |||| ||||||| ||||||| | ||||||||||| |||||||||| Sbjct: 145616 accccgactggacccccgcgatgatcaagtcggcgatcatgaccac 145661 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtg 163 |||||| || ||||| || |||||||||||||| |||||| Sbjct: 145545 caacataatgtccggcacctccatgtcgtgccctcacgtg 145584
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 44.1 bits (22), Expect = 0.36 Identities = 40/46 (86%) Strand = Plus / Plus Query: 195 acccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 |||| ||||||| ||||||| | ||||||||||| |||||||||| Sbjct: 61624 accccgactggacccccgcgatgatcaagtcggcgatcatgaccac 61669 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgcccgcacgtg 163 |||||| || ||||| || |||||||||||||| |||||| Sbjct: 61553 caacataatgtccggcacctccatgtcgtgccctcacgtg 61592
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 cgcggcgccgggcacgtggacc 335 |||||||||||||||||||||| Sbjct: 613151 cgcggcgccgggcacgtggacc 613130
>gb|AY108210.1| Zea mays PCO096605 mRNA sequence Length = 1795 Score = 44.1 bits (22), Expect = 0.36 Identities = 28/30 (93%) Strand = Plus / Plus Query: 208 ccccgcggcggtcaagtcggcgctcatgac 237 |||||||||| ||||||||||| ||||||| Sbjct: 857 ccccgcggcgatcaagtcggcgatcatgac 886 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 134 tccgggacgtccatgtcgtgcccgcacgtgagcggcctcgc 174 |||||||||||||||||| |||||| |||||||| |||| Sbjct: 783 tccgggacgtccatgtcgacgccgcacctgagcggcatcgc 823
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 cctcgccgcgctgctccggcaggcgc 194 |||||||||||||||||| ||||||| Sbjct: 13529347 cctcgccgcgctgctccgccaggcgc 13529372
>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete sequence Length = 115815 Score = 42.1 bits (21), Expect = 1.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 129 tcatctccgggacgtccatgtcgtgcccgcacgtgagcggc 169 |||| ||||||||||||||| || |||||||| ||||||| Sbjct: 25188 tcatatccgggacgtccatggcgaccccgcacgcgagcggc 25148
>ref|XM_532338.2| PREDICTED: Canis familiaris similar to eukaryotic translation initiation factor 2C, 2 (LOC475107), mRNA Length = 3587 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 265 ggagatcatcaaggacctggccacc 289 |||||||||| |||||||||||||| Sbjct: 2028 ggagatcatccaggacctggccacc 2052
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 cgtggaccccaacagcgcgctcaac 352 |||||||| |||||||||||||||| Sbjct: 2757791 cgtggacctcaacagcgcgctcaac 2757767
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 343 cgcgctcaaccccgggctggtgtac 367 |||||||||||||| |||||||||| Sbjct: 54692 cgcgctcaaccccgcgctggtgtac 54716
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 343 cgcgctcaaccccgggctggtgtac 367 |||||||||||||| |||||||||| Sbjct: 89671 cgcgctcaaccccgcgctggtgtac 89647
>gb|AF420014.1| Narcissus pseudonarcissus putative subtilisin mRNA, partial cds Length = 766 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 124 caacatcatctccgggacgtccatgtcgtgccc 156 |||||| ||||||||||| |||||||| ||||| Sbjct: 327 caacataatctccgggacttccatgtcttgccc 359
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 140 acgtccatgtcgtgcccgcacgtgagcggcctcgccg 176 |||||||||||||||||||| ||| |||| |||||| Sbjct: 23878974 acgtccatgtcgtgcccgcaagtgtccggcgtcgccg 23879010 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 197 ccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 ||||||||||||||||| || ||||||| || |||||||||| Sbjct: 23879031 ccggactggagccccgccgccatcaagtccgccatcatgaccac 23879074
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 140 acgtccatgtcgtgcccgcacgtgagcggcctcgccg 176 |||||||||||||||||||| ||| |||| |||||| Sbjct: 8585 acgtccatgtcgtgcccgcaagtgtccggcgtcgccg 8621 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 197 ccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 ||||||||||||||||| || ||||||| || |||||||||| Sbjct: 8642 ccggactggagccccgccgccatcaagtccgccatcatgaccac 8685
>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0556B08 Length = 136775 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 140 acgtccatgtcgtgcccgcacgtgagcggcctcgccg 176 |||||||||||||||||||| ||| |||| |||||| Sbjct: 118639 acgtccatgtcgtgcccgcaagtgtccggcgtcgccg 118675 Score = 40.1 bits (20), Expect = 5.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 197 ccggactggagccccgcggcggtcaagtcggcgctcatgaccac 240 ||||||||||||||||| || ||||||| || |||||||||| Sbjct: 118696 ccggactggagccccgccgccatcaagtccgccatcatgaccac 118739
>gb|AY818152.1| Nicotiana sylvestris clone NsN4R7 putative protein mRNA, partial cds Length = 369 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 121 gttcaacatcatctccgggacgtccatgtcgtgcccgcacgtgag 165 ||||||||| ||||| || || ||||||||||| || |||||||| Sbjct: 110 gttcaacattatctcgggcacctccatgtcgtgtccacacgtgag 154
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E01, complete sequence Length = 180426 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cggcctcgccgcgctgctcc 185 |||||||||||||||||||| Sbjct: 123795 cggcctcgccgcgctgctcc 123814
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 cttcctctgcgcgctcggct 413 |||||||||||||||||||| Sbjct: 265488 cttcctctgcgcgctcggct 265469
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 cgcacgtgagcggcctcgccgcgc 179 |||||||||||||||| ||||||| Sbjct: 3056818 cgcacgtgagcggccttgccgcgc 3056841
>gb|AC131110.3| Mus musculus BAC clone RP23-387J23 from chromosome 6, complete sequence Length = 205463 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 atcatcaaggacctggccac 288 |||||||||||||||||||| Sbjct: 179232 atcatcaaggacctggccac 179213
>emb|AL353736.11| Human DNA sequence from clone RP11-412P1 on chromosome 9 Contains the 3' end of the CDK5RAP2 gene for CDK5 regulatory subunit associated protein 2 (C48), complete sequence Length = 148875 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ccggggagatcatcaaggac 280 |||||||||||||||||||| Sbjct: 74835 ccggggagatcatcaaggac 74854
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 cgcacgtgagcggcctcgccgcgc 179 |||||||||||||||| ||||||| Sbjct: 1235566 cgcacgtgagcggccttgccgcgc 1235589
>gb|AC153634.3| Mus musculus 6 BAC RP23-368O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190237 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 atcatcaaggacctggccac 288 |||||||||||||||||||| Sbjct: 104336 atcatcaaggacctggccac 104355
>gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, complete sequence Length = 158297 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcatcaaggacctggccacc 289 |||||||||||||||||||| Sbjct: 93587 tcatcaaggacctggccacc 93568
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 cgcacgtgagcggcctcgccgcgc 179 |||||||||||||||| ||||||| Sbjct: 1399574 cgcacgtgagcggccttgccgcgc 1399551
>gb|AF084032.1|AF084032 Rhodobacter sphaeroides strain 2.4.1T quinol oxidase subunit I QxtA (qxtA) and quinol oxidase subunit II QxtB (qxtB) genes, complete cds Length = 2688 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 cttcctctgcgcgctcggct 413 |||||||||||||||||||| Sbjct: 2300 cttcctctgcgcgctcggct 2319
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccgcggcgccgggcacgtgg 332 |||||||||||||||||||| Sbjct: 2547222 ccgcggcgccgggcacgtgg 2547203
>gb|AC155284.7| Mus musculus 6 BAC RP23-241L3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205924 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 atcatcaaggacctggccac 288 |||||||||||||||||||| Sbjct: 138253 atcatcaaggacctggccac 138272
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ggcctggaccggcgaggcct 83 |||||||||||||||||||| Sbjct: 495708 ggcctggaccggcgaggcct 495727
>dbj|AP004903.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT01K08, TM0061, complete sequence Length = 94052 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 44 cccggcgtcaacatactcgcggcctgga 71 |||||||||||||| ||||| ||||||| Sbjct: 38334 cccggcgtcaacatcctcgccgcctgga 38307 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,937,513 Number of Sequences: 3902068 Number of extensions: 1937513 Number of successful extensions: 41112 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 152 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 38783 Number of HSP's gapped (non-prelim): 2314 length of query: 422 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 400 effective length of database: 17,147,199,772 effective search space: 6858879908800 effective search space used: 6858879908800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
