| Clone Name | bast23e11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 0.39 Identities = 21/21 (100%) Strand = Plus / Minus Query: 104 cgatgccgcgccacatcgcgc 124 ||||||||||||||||||||| Sbjct: 3201171 cgatgccgcgccacatcgcgc 3201151
>gb|AC101660.25| Mus musculus chromosome 15, clone RP23-4I22, complete sequence Length = 188464 Score = 42.1 bits (21), Expect = 0.39 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 acaagtcctcactcaccactg 69 ||||||||||||||||||||| Sbjct: 51172 acaagtcctcactcaccactg 51192
>gb|AY108865.1| Zea mays PCO075691 mRNA sequence Length = 425 Score = 40.1 bits (20), Expect = 1.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 97 gcctccacgatgccgcgccacatcgcgctgct 128 |||||||| ||||||||||| |||||||||| Sbjct: 65 gcctccacaatgccgcgccatctcgcgctgct 96
>emb|AL157936.12| Human DNA sequence from clone RP11-279I21 on chromosome 9q22.2-31.1 Contains the 5' end of gene FLJ14675, and the 5' end of a novel gene, complete sequence Length = 124559 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 gtcctcactcaccactgac 71 ||||||||||||||||||| Sbjct: 4380 gtcctcactcaccactgac 4398
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 113 gccacatcgcgctgctgtt 131 ||||||||||||||||||| Sbjct: 3612034 gccacatcgcgctgctgtt 3612016
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 gatgccgcgccacatcgcg 123 ||||||||||||||||||| Sbjct: 2505838 gatgccgcgccacatcgcg 2505820
>gb|AC103842.2| Homo sapiens chromosome 8, clone RP11-367J23, complete sequence Length = 150506 Score = 38.2 bits (19), Expect = 6.2 Identities = 25/27 (92%) Strand = Plus / Plus Query: 42 aaccagcacaagtcctcactcaccact 68 |||||||||||| |||| ||||||||| Sbjct: 10164 aaccagcacaagccctctctcaccact 10190
>gb|AC104051.3| Homo sapiens chromosome 8, clone CTD-2339F6, complete sequence Length = 120723 Score = 38.2 bits (19), Expect = 6.2 Identities = 25/27 (92%) Strand = Plus / Plus Query: 42 aaccagcacaagtcctcactcaccact 68 |||||||||||| |||| ||||||||| Sbjct: 67101 aaccagcacaagccctctctcaccact 67127
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 tatggcctccacgatgccg 111 ||||||||||||||||||| Sbjct: 788634 tatggcctccacgatgccg 788616
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 105 gatgccgcgccacatcgcgctgc 127 ||||||||||||||||| ||||| Sbjct: 748510 gatgccgcgccacatcgagctgc 748532 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 504,000 Number of Sequences: 3902068 Number of extensions: 504000 Number of successful extensions: 29584 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 29381 Number of HSP's gapped (non-prelim): 203 length of query: 131 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 110 effective length of database: 17,151,101,840 effective search space: 1886621202400 effective search space used: 1886621202400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)