>gb|AC139867.4| Mus musculus BAC clone RP23-430P22 from chromosome 1, complete sequence
          Length = 224730

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 17    ctcgtctctactccaccaaat 37
             |||||||||||||||||||||
Sbjct: 37765 ctcgtctctactccaccaaat 37785

>gb|AC165443.5| Mus musculus BAC clone RP23-95F15 from chromosome 1, complete sequence
          Length = 174254

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 17     ctcgtctctactccaccaaat 37
              |||||||||||||||||||||
Sbjct: 145869 ctcgtctctactccaccaaat 145889

>emb|AL590443.1|CNS07EGA chromosome III of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 194439

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    tccaccaaatccaaggacatc 48
             |||||||||||||||||||||
Sbjct: 21695 tccaccaaatccaaggacatc 21675

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                            
Query: 71       atgtcgaggacgggagctctgcatctggcttcaggcctgggagggatgatcggcaaggag 130
                ||||||| |||| | || ||| |||| ||||||||  | ||||||| |||| | ||||||
Sbjct: 33455665 atgtcgaagacgagtgccctggatcttgcttcaggattaggagggaagatcagaaaggag 33455606

                        
Query: 131      caagtcaa 138
                ||||||||
Sbjct: 33455605 caagtcaa 33455598

>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete
             sequence
          Length = 154555

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 71    atgtcgaggacgggagctctgcatctggcttcaggcctgggagggatgatcggcaaggag 130
             ||||||| |||| | || ||| |||| ||||||||  | ||||||| |||| | ||||||
Sbjct: 42446 atgtcgaagacgagtgccctggatcttgcttcaggattaggagggaagatcagaaaggag 42505

                     
Query: 131   caagtcaa 138
             ||||||||
Sbjct: 42506 caagtcaa 42513

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                            
Query: 71       atgtcgaggacgggagctctgcatctggcttcaggcctgggagggatgatcggcaaggag 130
                ||||||| |||| | || ||| |||| ||||||||  | ||||||| |||| | ||||||
Sbjct: 33546175 atgtcgaagacgagtgccctggatcttgcttcaggattaggagggaagatcagaaaggag 33546116

                        
Query: 131      caagtcaa 138
                ||||||||
Sbjct: 33546115 caagtcaa 33546108

>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     ggacatcaatttcggattg 60
              |||||||||||||||||||
Sbjct: 542249 ggacatcaatttcggattg 542231

>gb|AC121812.3| Mus musculus chromosome 7 clone RP23-454P17, complete sequence
          Length = 162279

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 23     tctactccaccaaatccaa 41
              |||||||||||||||||||
Sbjct: 133649 tctactccaccaaatccaa 133667

>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     ggacatcaatttcggattg 60
              |||||||||||||||||||
Sbjct: 542065 ggacatcaatttcggattg 542047

>emb|CT009560.9| Pig DNA sequence from clone CH242-4C12 on chromosome 17, complete
             sequence
          Length = 166118

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 96    tggcttcaggcctgggagg 114
             |||||||||||||||||||
Sbjct: 57118 tggcttcaggcctgggagg 57136

>gb|AC103600.8| Mus musculus chromosome 1, clone RP23-247F18, complete sequence
          Length = 199808

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    ccaaatccaaggacatcaa 50
             |||||||||||||||||||
Sbjct: 14536 ccaaatccaaggacatcaa 14518

>gb|AC157806.4| Mus musculus chromosome 1, clone RP24-329M13, complete sequence
          Length = 133026

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 32     ccaaatccaaggacatcaa 50
              |||||||||||||||||||
Sbjct: 105973 ccaaatccaaggacatcaa 105955

>gb|AC097487.2| Homo sapiens BAC clone RP11-217C7 from 4, complete sequence
          Length = 165504

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 92     catctggcttcaggcctgggagg 114
              ||||||| |||||||||||||||
Sbjct: 124113 catctgggttcaggcctgggagg 124135

>emb|BX908741.7| Mouse DNA sequence from clone RP23-189F6 on chromosome 2, complete
             sequence
          Length = 139484

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    caaatccaaggacatcaat 51
             |||||||||||||||||||
Sbjct: 64182 caaatccaaggacatcaat 64164

>emb|AL591905.10| Mouse DNA sequence from clone RP23-152H17 on chromosome 2, complete
              sequence
          Length = 194013

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 96     tggcttcaggcctgggagg 114
              |||||||||||||||||||
Sbjct: 162842 tggcttcaggcctgggagg 162824

>emb|AL954170.4| Mouse DNA sequence from clone RP23-467H15 on chromosome 2, complete
             sequence
          Length = 138152

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    caaatccaaggacatcaat 51
             |||||||||||||||||||
Sbjct: 62156 caaatccaaggacatcaat 62138

>emb|AL831746.5| Mouse DNA sequence from clone RP23-67O11 on chromosome 4, complete
             sequence
          Length = 239570

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 1     agaaggcaaaccacatctcgtct 23
             |||||||||||||||||| ||||
Sbjct: 24900 agaaggcaaaccacatctggtct 24878

>emb|AL772345.5| Mouse DNA sequence from clone RP23-311I21 on chromosome 1, complete
              sequence
          Length = 198092

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     tccaccaaatccaaggaca 46
              |||||||||||||||||||
Sbjct: 116216 tccaccaaatccaaggaca 116234

>emb|AL591946.14| Mouse DNA sequence from clone RP23-290M7 on chromosome 15, complete
             sequence
          Length = 188892

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 98    gcttcaggcctgggaggga 116
             |||||||||||||||||||
Sbjct: 30250 gcttcaggcctgggaggga 30232


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,021,275
Number of Sequences: 3902068
Number of extensions: 1021275
Number of successful extensions: 67988
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67880
Number of HSP's gapped (non-prelim): 108
length of query: 141
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 120
effective length of database: 17,151,101,840
effective search space: 2058132220800
effective search space used: 2058132220800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)