>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence
          Length = 127914

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 98/120 (81%)
 Strand = Plus / Minus

                                                                         
Query: 183   cggtggctcctggtcgagcaccccgccgtcgcctccttccactggcgcccgggcaccacc 242
             |||||||||||||| |||||||| || || ||||| |||| |||||  || |||  ||| 
Sbjct: 32266 cggtggctcctggtggagcacccggcggtggcctcgttccgctggcagccaggccgcacg 32207

                                                                         
Query: 243   ctcggggcgtcgccgtccttcgccgcggccgccgtctgcgcctacctcgcggcggtgctc 302
              |||| ||| || |||||||||| || |||| | |||||| ||||||||| |||||||||
Sbjct: 32206 gtcggcgcgacggcgtccttcgcggccgccgtcatctgcggctacctcgccgcggtgctc 32147

>ref|XM_469423.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1301

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 158 ggcggccgggctgctgcgccacgtccggtggctcctggtcgagcaccccgccgtcgcctc 217
           |||| ||| ||||||||| | || |||||||   |||||||| |||||||||||||||||
Sbjct: 64  ggcgaccgcgctgctgcggcgcgcccggtgggcgctggtcgaccaccccgccgtcgcctc 123

                
Query: 218 cttcc 222
           |||||
Sbjct: 124 cttcc 128



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 255 ccgtccttcgccgcggccgccgtctgcgcctacctcgc 292
           |||||||||||||| |||| | ||||||||||||||||
Sbjct: 161 ccgtccttcgccgccgccgtcatctgcgcctacctcgc 198

>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
              map S2606, complete sequence
          Length = 124140

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                          
Query: 158    ggcggccgggctgctgcgccacgtccggtggctcctggtcgagcaccccgccgtcgcctc 217
              |||| ||| ||||||||| | || |||||||   |||||||| |||||||||||||||||
Sbjct: 114054 ggcgaccgcgctgctgcggcgcgcccggtgggcgctggtcgaccaccccgccgtcgcctc 113995

                   
Query: 218    cttcc 222
              |||||
Sbjct: 113994 cttcc 113990



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 255    ccgtccttcgccgcggccgccgtctgcgcctacctcgc 292
              |||||||||||||| |||| | ||||||||||||||||
Sbjct: 113957 ccgtccttcgccgccgccgtcatctgcgcctacctcgc 113920

>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08
            map R2847, complete sequence
          Length = 100918

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 158  ggcggccgggctgctgcgccacgtccggtggctcctggtcgagcaccccgccgtcgcctc 217
            |||| ||| ||||||||| | || |||||||   |||||||| |||||||||||||||||
Sbjct: 2086 ggcgaccgcgctgctgcggcgcgcccggtgggcgctggtcgaccaccccgccgtcgcctc 2027

                 
Query: 218  cttcc 222
            |||||
Sbjct: 2026 cttcc 2022



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 255  ccgtccttcgccgcggccgccgtctgcgcctacctcgc 292
            |||||||||||||| |||| | ||||||||||||||||
Sbjct: 1989 ccgtccttcgccgccgccgtcatctgcgcctacctcgc 1952

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 158      ggcggccgggctgctgcgccacgtccggtggctcctggtcgagcaccccgccgtcgcctc 217
                |||| ||| ||||||||| | || |||||||   |||||||| |||||||||||||||||
Sbjct: 27869924 ggcgaccgcgctgctgcggcgcgcccggtgggcgctggtcgaccaccccgccgtcgcctc 27869865

                     
Query: 218      cttcc 222
                |||||
Sbjct: 27869864 cttcc 27869860



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 255      ccgtccttcgccgcggccgccgtctgcgcctacctcgc 292
                |||||||||||||| |||| | ||||||||||||||||
Sbjct: 27869827 ccgtccttcgccgccgccgtcatctgcgcctacctcgc 27869790



 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 263      cgccgcggccgccgtctgcgcctacc 288
                |||||| |||||||||||||||||||
Sbjct: 32395834 cgccgccgccgccgtctgcgcctacc 32395809



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 265      ccgcggccgccgtctgcgcctacc 288
                |||| |||||||||||||||||||
Sbjct: 32395913 ccgccgccgccgtctgcgcctacc 32395890

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 158      ggcggccgggctgctgcgccacgtccggtggctcctggtcgagcaccccgccgtcgcctc 217
                |||| ||| ||||||||| | || |||||||   |||||||| |||||||||||||||||
Sbjct: 27961248 ggcgaccgcgctgctgcggcgcgcccggtgggcgctggtcgaccaccccgccgtcgcctc 27961189

                     
Query: 218      cttcc 222
                |||||
Sbjct: 27961188 cttcc 27961184



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 255      ccgtccttcgccgcggccgccgtctgcgcctacctcgc 292
                |||||||||||||| |||| | ||||||||||||||||
Sbjct: 27961151 ccgtccttcgccgccgccgtcatctgcgcctacctcgc 27961114



 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 263      cgccgcggccgccgtctgcgcctacc 288
                |||||| |||||||||||||||||||
Sbjct: 32486344 cgccgccgccgccgtctgcgcctacc 32486319



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 265      ccgcggccgccgtctgcgcctacc 288
                |||| |||||||||||||||||||
Sbjct: 32486423 ccgccgccgccgtctgcgcctacc 32486400

>dbj|AK120400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088D23, full
            insert sequence
          Length = 2663

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 158  ggcggccgggctgctgcgccacgtccggtggctcctggtcgagcaccccgccgtcgcctc 217
            |||| ||| ||||||||| | || |||||||   |||||||| |||||||||||||||||
Sbjct: 2184 ggcgaccgcgctgctgcggcgcgcccggtgggcgctggtcgaccaccccgccgtcgcctc 2125

                 
Query: 218  cttcc 222
            |||||
Sbjct: 2124 cttcc 2120



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 255  ccgtccttcgccgcggccgccgtctgcgcctacctcgc 292
            |||||||||||||| |||| | ||||||||||||||||
Sbjct: 2087 ccgtccttcgccgccgccgtcatctgcgcctacctcgc 2050

>dbj|AK063166.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-H06, full
           insert sequence
          Length = 1044

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 158 ggcggccgggctgctgcgccacgtccggtggctcctggtcgagcaccccgccgtcgcctc 217
           |||| ||| ||||||||| | || |||||||   |||||||| |||||||||||||||||
Sbjct: 63  ggcgaccgcgctgctgcggcgcgcccggtgggcgctggtcgaccaccccgccgtcgcctc 122

                
Query: 218 cttcc 222
           |||||
Sbjct: 123 cttcc 127



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 255 ccgtccttcgccgcggccgccgtctgcgcctacctcgc 292
           |||||||||||||| |||| | ||||||||||||||||
Sbjct: 160 ccgtccttcgccgccgccgtcatctgcgcctacctcgc 197

>ref|NM_185485.1| Oryza sativa (japonica cultivar-group), Ozsa8582 predicted mRNA
          Length = 1077

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 249 gcgtcgccgtccttcgccgcggccgcc 275
           |||||||||||||||||||| ||||||
Sbjct: 68  gcgtcgccgtccttcgccgccgccgcc 42

>gb|DQ088999.1| Oryza sativa (japonica cultivar-group) XB3-related protein (XBOS36)
           mRNA, complete cds
          Length = 1263

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 249 gcgtcgccgtccttcgccgcggccgcc 275
           |||||||||||||||||||| ||||||
Sbjct: 68  gcgtcgccgtccttcgccgccgccgcc 42

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 249     gcgtcgccgtccttcgccgcggccgcc 275
               |||||||||||||||||||| ||||||
Sbjct: 1520082 gcgtcgccgtccttcgccgccgccgcc 1520056

>dbj|AP000391.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0538C01
          Length = 155643

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 249   gcgtcgccgtccttcgccgcggccgcc 275
             |||||||||||||||||||| ||||||
Sbjct: 48806 gcgtcgccgtccttcgccgccgccgcc 48780

>dbj|AK119921.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-G07, full
           insert sequence
          Length = 1429

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 249 gcgtcgccgtccttcgccgcggccgcc 275
           |||||||||||||||||||| ||||||
Sbjct: 321 gcgtcgccgtccttcgccgccgccgcc 295

>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete
             sequence
          Length = 145507

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 263   cgccgcggccgccgtctgcgcctacc 288
             |||||| |||||||||||||||||||
Sbjct: 47962 cgccgccgccgccgtctgcgcctacc 47937



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 265   ccgcggccgccgtctgcgcctacc 288
             |||| |||||||||||||||||||
Sbjct: 48041 ccgccgccgccgtctgcgcctacc 48018

>emb|AL031583.2|DMC34F3 Drosophila melanogaster cosmid clone 34F3
          Length = 41396

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 207   gccgtcgcctccttccactggc 228
             ||||||||||||||||||||||
Sbjct: 30690 gccgtcgcctccttccactggc 30669

>gb|AC103548.8| Drosophila melanogaster X BAC RP98-19J1 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 182490

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 207    gccgtcgcctccttccactggc 228
              ||||||||||||||||||||||
Sbjct: 137540 gccgtcgcctccttccactggc 137519

>ref|NM_130507.2| Drosophila melanogaster CG7359-RA (CG7359), mRNA
          Length = 1749

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 207 gccgtcgcctccttccactggc 228
           ||||||||||||||||||||||
Sbjct: 333 gccgtcgcctccttccactggc 312

>gb|AY069680.1| Drosophila melanogaster LD45288 full length cDNA
          Length = 1744

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 207 gccgtcgcctccttccactggc 228
           ||||||||||||||||||||||
Sbjct: 299 gccgtcgcctccttccactggc 278

>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete
              sequence
          Length = 315092

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 207    gccgtcgcctccttccactggc 228
              ||||||||||||||||||||||
Sbjct: 275545 gccgtcgcctccttccactggc 275524

>gb|AY899213.1| Streptomyces aizunensis strain NRRL B-11277 thioesterase,
            transcriptional regulator, response regulator, sensor
            kinase, and putative membrane proteins genes, complete
            cds
          Length = 8735

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 158  ggcggccgggctgctgcgcca 178
            |||||||||||||||||||||
Sbjct: 2309 ggcggccgggctgctgcgcca 2289

>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 157    tggcggccgggctgctgcgcc 177
              |||||||||||||||||||||
Sbjct: 514481 tggcggccgggctgctgcgcc 514461

>gb|AC171647.3| Rhesus Macaque  BAC CH250-482O21 (Children's Hospital Oakland
            Research Institute Rhesus macaque Adult Male BAC Library)
            complete sequence
          Length = 123862

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 153  cctatggcggccgggctgctg 173
            |||||||||||||||||||||
Sbjct: 6541 cctatggcggccgggctgctg 6561

>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    ctcgccggcgccgtcgctcg 139
              ||||||||||||||||||||
Sbjct: 414133 ctcgccggcgccgtcgctcg 414152

>ref|XM_567741.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNK01410) partial mRNA
          Length = 3652

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 120 ctcgccggcgccgtcgctcg 139
           ||||||||||||||||||||
Sbjct: 540 ctcgccggcgccgtcgctcg 521

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 161     ggccgggctgctgcgccacg 180
               ||||||||||||||||||||
Sbjct: 2089851 ggccgggctgctgcgccacg 2089832

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 249      gcgtcgccgtccttcgccgcggccgccg 276
                |||||||||||| ||||||| |||||||
Sbjct: 22672254 gcgtcgccgtccatcgccgccgccgccg 22672227

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 263     cgccgcggccgccgtctgcg 282
               ||||||||||||||||||||
Sbjct: 3914535 cgccgcggccgccgtctgcg 3914554

>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0024F06
          Length = 129402

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 249   gcgtcgccgtccttcgccgcggccgccg 276
             |||||||||||| ||||||| |||||||
Sbjct: 48966 gcgtcgccgtccatcgccgccgccgccg 48939

>gb|U26427.1|ABU26427 Azospirillum brasilense ATP-binding protein, nifU, nifS, and nifV
            genes, complete cds; and unknown gene
          Length = 5115

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 193  tggtcgagcaccccgccgtc 212
            ||||||||||||||||||||
Sbjct: 2021 tggtcgagcaccccgccgtc 2040


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,794,943
Number of Sequences: 3902068
Number of extensions: 1794943
Number of successful extensions: 39768
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39008
Number of HSP's gapped (non-prelim): 760
length of query: 303
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 281
effective length of database: 17,147,199,772
effective search space: 4818363135932
effective search space used: 4818363135932
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)