>YA14_SCHPO (Q09686) Hypothetical protein C13C5.04 in chromosome I|
          Length = 248

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
 Frame = +2

Query: 218 ALLQCGEDSAYVRDAYGGYFEVFRALLAEDGERW--------RVYRAVRG--ELPSDEDA 367
           A+L        +  AYG Y ++ ++LL    E +        + Y   +   + P  ED 
Sbjct: 6   AILNADTPMVEITSAYGDYADMVKSLLQSGSEYYSTEWNLVTKTYEVYKNPNDYPQKEDF 65

Query: 368 AGVDGFVISGSCSDAHGDEPWILALVDLVRRQLAAGK--RVLGVCFGH 505
             ++  +I+GS + A  D PWI  L+  V+  L      +++G+CFGH
Sbjct: 66  PNINAIIITGSKASATSDAPWIKKLISFVKDVLFKYPHIKIVGLCFGH 113

>PDXT_SULSO (Q9UWX4) Glutamine amidotransferase subunit pdxT (EC 2.6.-.-)|
           (Glutamine amidotransferase glutaminase subunit pdxT)
          Length = 200

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +2

Query: 332 AVRGELPS---DEDAAGVDGFVISGSCSDAHGDEPWILALVDLVRRQLAAGKRVLGVCFG 502
           ++ GE+ S    +D  GVDG +I G  S   G     L L+D ++ ++ +G  VLG C G
Sbjct: 27  SLNGEIISIKIPKDLKGVDGVIIPGGESTTIGLVAKRLGLLDELKEKITSGLPVLGTCAG 86

>SDC4_MOUSE (O35988) Syndecan-4 precursor (SYND4) (Ryudocan core protein)|
          Length = 198

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 329 RAVRGELPSDEDAAGVDGFVISGSCSDAHGDEP 427
           R   G LP DEDA G D F +SGS      +EP
Sbjct: 41  RYFSGALPDDEDAGGSDDFELSGSGDLDDTEEP 73

>PDXT_STRAW (Q81ZV5) Glutamine amidotransferase subunit pdxT (EC 2.6.-.-)|
           (Glutamine amidotransferase glutaminase subunit pdxT)
          Length = 201

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 18/57 (31%), Positives = 27/57 (47%)
 Frame = +2

Query: 332 AVRGELPSDEDAAGVDGFVISGSCSDAHGDEPWILALVDLVRRQLAAGKRVLGVCFG 502
           AV  E+   E+ A VDG VI G  S        +  +++ +R ++  G  V G C G
Sbjct: 27  AVAREVRRPEELAEVDGLVIPGGESTTISKLAHLFGMMEPLRARVRGGMPVYGTCAG 83

>HIS5_SYMTH (Q67KH8) Imidazole glycerol phosphate synthase subunit hisH (EC|
           2.4.2.-) (IGP synthase glutamine amidotransferase
           subunit) (IGP synthase subunit hisH) (ImGP synthase
           subunit hisH) (IGPS subunit hisH)
          Length = 212

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
 Frame = +2

Query: 329 RAVRGELPSDED---AAGVDGFVISGSCSDAHGDEPWILALVD-LVRRQLAAGKRVLGVC 496
           RAV  E    +D    AG DG V+ G  +   G +      +D  VR+  AAG+ VLG+C
Sbjct: 22  RAVGFEAAVSDDPAAVAGADGLVLPGVGAFGTGMQNLARRGLDQAVRQAAAAGRPVLGIC 81

Query: 497 FG 502
            G
Sbjct: 82  LG 83

>HIS5_LEIXX (Q6AE14) Imidazole glycerol phosphate synthase subunit hisH (EC|
           2.4.2.-) (IGP synthase glutamine amidotransferase
           subunit) (IGP synthase subunit hisH) (ImGP synthase
           subunit hisH) (IGPS subunit hisH)
          Length = 209

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 410 AHGDEPWILALVDLVRRQLAAGKRVLGVCFG 502
           AHGDE        ++ R+LA G+ VLG+C G
Sbjct: 62  AHGDE--------IIERRLAGGRPVLGICVG 84

>PDXT_BIFLO (Q8G575) Glutamine amidotransferase subunit pdxT (EC 2.6.-.-)|
           (Glutamine amidotransferase glutaminase subunit pdxT)
          Length = 190

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = +2

Query: 260 AYGGYFEVFRALLAEDGERWRVYRAVRGELPSDEDAAGVDGFVISGSCSDAHGDEPWILA 439
           A  G F    A+L + G  W++ RA      +++    +D  ++ G  S   G       
Sbjct: 6   AVQGAFAEHAAVLDKLGAPWKLLRA------AEDFDESIDRVILPGGESTTQGKLLHSTG 59

Query: 440 LVDLVRRQLAAGKRVLGVCFG 502
           L + +   + AGK V G C G
Sbjct: 60  LFEPIAAHIKAGKPVFGTCAG 80

>PDXT_SULAC (Q4J8L2) Glutamine amidotransferase subunit pdxT (EC 2.6.-.-)|
           (Glutamine amidotransferase glutaminase subunit pdxT)
          Length = 200

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +2

Query: 350 PSDEDAAGVDGFVISGSCSDAHGDEPWILALVDLVRRQLAAGKRVLGVCFG 502
           P D D   +DG VI G  S   G     L ++D ++ ++ AG  VLG C G
Sbjct: 38  PKDVDL--IDGVVIPGGESTTIGIIAEKLGVLDEIKAKINAGLPVLGTCAG 86

>PURQ_METAC (Q8TPF0) Phosphoribosylformylglycinamidine synthase I (EC 6.3.5.3)|
           (FGAM synthase I)
          Length = 232

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +2

Query: 356 DEDAAGVDGFVISGSCSDAHGDEPWILA----LVDLVRRQLAAGKRVLGVCFG 502
           +E+  G DG V+ G  S         +A    ++D V++  A GK VLG+C G
Sbjct: 36  EENLTGFDGVVVPGGFSYGDYLRAGAIAARTPIMDSVKKIAAEGKPVLGICNG 88

>PDXT_AERPE (Q9YFK4) Glutamine amidotransferase subunit pdxT (EC 2.6.-.-)|
           (Glutamine amidotransferase glutaminase subunit pdxT)
          Length = 203

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 359 EDAAGVDGFVISGSCSDAHGDEPWILALVDLVRRQLAAGKRVLGVCFG 502
           ED  G+DG +I G  S   G     L +++ +R Q+  G   +G C G
Sbjct: 39  EDLKGLDGVIIPGGESTTIGILAKRLGVLEPLREQVLNGLPAMGTCAG 86

>DCBD2_MOUSE (Q91ZV3) Discoidin, CUB and LCCL domain-containing protein 2|
           precursor (Endothelial and smooth muscle cell-derived
           neuropilin-like protein)
          Length = 769

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 272 YFEVFRALLAEDGERWRVYR 331
           Y   +R L ++DG+RW VYR
Sbjct: 374 YVSAYRVLYSDDGQRWTVYR 393

>COBQ_STRAW (Q829J5) Cobyric acid synthase|
          Length = 502

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 359 EDAAGVDGFVISGSCSDAHGDEPWIL--ALVDLVRRQLAAGKRVLGVCFG 502
           E+ A  D  VI G+       E W+    L + +RR+ AAG+ VLG+C G
Sbjct: 295 EELADADLVVIPGTRGTVKALE-WLRERGLAEALRRRAAAGRPVLGICGG 343

>DNM3B_HUMAN (Q9UBC3) DNA (cytosine-5)-methyltransferase 3B (EC 2.1.1.37)|
           (Dnmt3b) (DNA methyltransferase HsaIIIB) (DNA MTase
           HsaIIIB) (M.HsaIIIB)
          Length = 853

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 347 LPSDEDAAG-VDGFVISGSCSDAHGDEPWILALV 445
           L  +EDA G  D  +++G+CSD   D P IL  +
Sbjct: 8   LNGEEDAGGREDSILVNGACSDQSSDSPPILEAI 41

>PDXT_BACCI (Q8L1A7) Glutamine amidotransferase subunit pdxT (EC 2.6.-.-)|
           (Glutamine amidotransferase glutaminase subunit pdxT)
          Length = 190

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
 Frame = +2

Query: 290 ALLAEDGERWRVYRAVRGE---LPSDEDAAGVDGFVISGSCSDAHGDEPWILALVDLVRR 460
           AL     E  R+  AV GE   +   E  A +DG +I G  S   G        ++ +R 
Sbjct: 7   ALQGAVAEHIRLIEAVGGEGVVVKRAEQLAELDGLIIPGGESTTIGKLMRRYGFIEAIRD 66

Query: 461 QLAAGKRVLGVCFG 502
               GK V G C G
Sbjct: 67  FSNQGKAVFGTCAG 80

>EXOD_BPT4 (P04536) Exodeoxyribonuclease (EC 3.1.11.1) (3'-5' exonuclease)|
          Length = 227

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 350 PSDEDAAGVDGFVISGSCSDAHGDEPW 430
           PSDED + +DG        +AH  +PW
Sbjct: 81  PSDEDVSTIDGIAKFNDYINAHNIDPW 107

>GLAS_DROVI (Q24732) Protein glass|
          Length = 598

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = +2

Query: 5   SQFSQPASQRASAIPSVAQSHSPIPPPXXXXXXXXXXXXVGMGMG 139
           + F  P      A+PS+A   SP PP              G+G G
Sbjct: 334 ADFRAPPPTALGALPSLADKESPSPPASSTAAALGYYATGGVGQG 378


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,014,962
Number of Sequences: 219361
Number of extensions: 588569
Number of successful extensions: 2815
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2814
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)