ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast22e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome... 107 1e-20
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 107 1e-20
3emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 46 0.033
4emb|BX640431.1| Bordetella parapertussis strain 12822, complete ... 46 0.033
5emb|BX640416.1| Bordetella pertussis strain Tohama I, complete g... 46 0.033
6gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.13
7gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.13
8dbj|AK073891.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.13
9gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 44 0.13
10ref|NM_196719.1| Oryza sativa (japonica cultivar-group) hypothet... 42 0.52
11ref|XM_362592.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 0.52
12gb|AY452667.1| Chlamydomonas reinhardtii flagellar radial spoke ... 42 0.52
13gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.52
14dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.52
15dbj|AK071645.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.52
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.52
17gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 2.0
18gb|AY426175.1| Cryptococcus neoformans var. neoformans Sec53p (S... 40 2.0
19gb|AY421721.1| Cryptococcus neoformans var. neoformans putative ... 40 2.0
20ref|XM_580467.2| PREDICTED: Bos taurus similar to Protein disulf... 40 2.0
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 2.0
22emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4,... 40 2.0
23gb|AE012255.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 2.0
24gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 2.0
25gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare str... 40 2.0
26gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 2.0
27dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
28dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
29dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
30dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
31ref|XM_215826.3| PREDICTED: Rattus norvegicus pantothenate kinas... 40 2.0
32dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 2.0
33dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
34dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
35dbj|AK070038.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.0
36gb|AF161183.1|AF161183 Burkholderia cepacia tryptophan halogenas... 40 2.0
37emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4,... 40 2.0
38gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 2.0
39emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chro... 40 2.0
40gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome... 38 8.1
41gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome... 38 8.1
42gb|AY524034.1| Paulownia tomentosa floricaula (FLO) mRNA, FLOA p... 38 8.1
43ref|XM_421237.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ... 38 8.1
44ref|XM_323382.1| Neurospora crassa OR74A predicted protein (NCU0... 38 8.1
45ref|XM_952586.1| Neurospora crassa OR74A hypothetical protein (N... 38 8.1
46gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole b... 38 8.1
47gb|AY530548.1| Leucocarpus perfoliatus floricaula (FLO) mRNA, FL... 38 8.1
48ref|XM_992071.1| PREDICTED: Mus musculus hypothetical protein LO... 38 8.1
49ref|XM_906868.2| PREDICTED: Mus musculus RIKEN cDNA 2410012M07 g... 38 8.1
50ref|XM_906832.2| PREDICTED: Mus musculus hypothetical LOC623166 ... 38 8.1
51ref|XM_887600.2| PREDICTED: Mus musculus hypothetical LOC623166 ... 38 8.1
52ref|XM_744966.1| Aspergillus fumigatus Af293 hypothetical protei... 38 8.1
53gb|AF391808.2| Zea mays chromosome 9S bz genomic region strain McC 38 8.1
54gb|AC121937.2| Mus musculus BAC clone RP24-207M20 from 9, comple... 38 8.1
55gb|CP000316.1| Polaromonas sp. JS666, complete genome 38 8.1
56gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 38 8.1
57emb|BX640426.1| Bordetella parapertussis strain 12822, complete ... 38 8.1
58emb|AJ440002.1|OSA440002 Oryza sativa (japonica cultivar-group) ... 38 8.1
59gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 38 8.1
60gb|AF448416.1| Zea mays B73 chromosome 9S bz genomic region 38 8.1
61gb|AC010477.8| Homo sapiens chromosome 5 clone CTD-2313D3, compl... 38 8.1
62gb|AC010638.7|AC010638 Homo sapiens chromosome 5 clone CTD-2350J... 38 8.1
63gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 38 8.1
64dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.1
65dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 38 8.1
66gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 38 8.1
67dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 38 8.1
68dbj|AK100483.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.1
69emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 38 8.1
70gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence 38 8.1
71gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone ... 38 8.1
72gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 8.1
73emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa... 38 8.1
74emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC... 38 8.1 
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06,
             complete sequence
          Length = 139139

 Score =  107 bits (54), Expect = 1e-20
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                         
Query: 52    gcgatggagctggaggcggcgaggcggcgcttccagctctggctccgcgggctgcggtcg 111
             ||||||||| |||||||||||| |||||| ||||| |||||||||||||||||||||  |
Sbjct: 28647 gcgatggaggtggaggcggcgacgcggcggttccacctctggctccgcgggctgcggggg 28588

                                                               
Query: 112   ctgcgccgcgacctccgcacggcgcgctgggccgacgacccggcgcagct 161
             ||||| ||||| |||||  |||| || ||||| ||||||||||| |||||
Sbjct: 28587 ctgcggcgcgagctccgggcggcccggtgggcggacgacccggcccagct 28538
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  107 bits (54), Expect = 1e-20
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                            
Query: 52       gcgatggagctggaggcggcgaggcggcgcttccagctctggctccgcgggctgcggtcg 111
                ||||||||| |||||||||||| |||||| ||||| |||||||||||||||||||||  |
Sbjct: 27664089 gcgatggaggtggaggcggcgacgcggcggttccacctctggctccgcgggctgcggggg 27664030

                                                                  
Query: 112      ctgcgccgcgacctccgcacggcgcgctgggccgacgacccggcgcagct 161
                ||||| ||||| |||||  |||| || ||||| ||||||||||| |||||
Sbjct: 27664029 ctgcggcgcgagctccgggcggcccggtgggcggacgacccggcccagct 27663980



 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 51       ggcgatggagctggaggcggcg 72
                ||||||||||||||||||||||
Sbjct: 29239979 ggcgatggagctggaggcggcg 29240000



 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 96       ccgcgggctgcggtcgctg 114
                |||||||||||||||||||
Sbjct: 14717096 ccgcgggctgcggtcgctg 14717078
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 46.1 bits (23), Expect = 0.033
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 133    gcgcgctgggccgacgacccggc 155
              |||||||||||||||||||||||
Sbjct: 125784 gcgcgctgggccgacgacccggc 125762
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>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 46.1 bits (23), Expect = 0.033
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 133    gcgcgctgggccgacgacccggc 155
              |||||||||||||||||||||||
Sbjct: 154887 gcgcgctgggccgacgacccggc 154909
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>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12
          Length = 349354

 Score = 46.1 bits (23), Expect = 0.033
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 133   gcgcgctgggccgacgacccggc 155
             |||||||||||||||||||||||
Sbjct: 17778 gcgcgctgggccgacgacccggc 17756
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>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22,
              complete sequence
          Length = 142854

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 51     ggcgatggagctggaggcggcg 72
              ||||||||||||||||||||||
Sbjct: 123438 ggcgatggagctggaggcggcg 123459
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 51    ggcgatggagctggaggcggcg 72
             ||||||||||||||||||||||
Sbjct: 18636 ggcgatggagctggaggcggcg 18657
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>dbj|AK073891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075A18, full
           insert sequence
          Length = 3039

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 51  ggcgatggagctggaggcggcg 72
           ||||||||||||||||||||||
Sbjct: 274 ggcgatggagctggaggcggcg 295
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 140     gggccgacgacccggcgcagctcgcc 165
               |||||| |||||||||||||||||||
Sbjct: 2577457 gggccgccgacccggcgcagctcgcc 2577432



 Score = 42.1 bits (21), Expect = 0.52
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 131    cggcgcgctgggccgacgacccggc 155
              ||||||||||||||| |||||||||
Sbjct: 634355 cggcgcgctgggccggcgacccggc 634331
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>ref|NM_196719.1| Oryza sativa (japonica cultivar-group) hypothetical protein
          (OSJNBb0015F09b.13), mRNA
          Length = 243

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 52 gcgatggagctggaggcggcg 72
          |||||||||||||||||||||
Sbjct: 70 gcgatggagctggaggcggcg 90
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>ref|XM_362592.1| Magnaporthe grisea 70-15 hypothetical protein (MG08175.4) partial
           mRNA
          Length = 915

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 65  aggcggcgaggcggcgcttcc 85
           |||||||||||||||||||||
Sbjct: 288 aggcggcgaggcggcgcttcc 308
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>gb|AY452667.1| Chlamydomonas reinhardtii flagellar radial spoke nucleoside
            diphosphate kinase mRNA, complete cds
          Length = 2219

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 141  ggccgacgacccggcgcagct 161
            |||||||||||||||||||||
Sbjct: 1186 ggccgacgacccggcgcagct 1206
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>gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             nbeb0015F09b, complete sequence
          Length = 108964

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 52    gcgatggagctggaggcggcg 72
             |||||||||||||||||||||
Sbjct: 67269 gcgatggagctggaggcggcg 67289
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 52       gcgatggagctggaggcggcg 72
                |||||||||||||||||||||
Sbjct: 15483923 gcgatggagctggaggcggcg 15483943
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>dbj|AK071645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105M22, full
           insert sequence
          Length = 1276

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  gcgatggagctggaggcggcg 72
           |||||||||||||||||||||
Sbjct: 258 gcgatggagctggaggcggcg 278
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 0.52
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 52       gcgatggagctggaggcggcg 72
                |||||||||||||||||||||
Sbjct: 15492164 gcgatggagctggaggcggcg 15492184
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>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete
               sequence
          Length = 1194300

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 61      ctggaggcggcgaggcggcg 80
               ||||||||||||||||||||
Sbjct: 1134171 ctggaggcggcgaggcggcg 1134190
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>gb|AY426175.1| Cryptococcus neoformans var. neoformans Sec53p (SEC53) gene,
           complete cds
          Length = 3185

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 61  ctggaggcggcgaggcggcg 80
           ||||||||||||||||||||
Sbjct: 845 ctggaggcggcgaggcggcg 864
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>gb|AY421721.1| Cryptococcus neoformans var. neoformans putative O-acetyl-coA
          transporter (CAS8) gene, complete cds
          Length = 2460

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 61 ctggaggcggcgaggcggcg 80
          ||||||||||||||||||||
Sbjct: 68 ctggaggcggcgaggcggcg 49
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>ref|XM_580467.2| PREDICTED: Bos taurus similar to Protein disulfide-isomerase A2
           precursor (PDIp) (LOC504356), mRNA
          Length = 1635

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  ccagctctggctccgcgggc 103
           ||||||||||||||||||||
Sbjct: 352 ccagctctggctccgcgggc 333
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 63      ggaggcggcgaggcggcgct 82
               ||||||||||||||||||||
Sbjct: 4087946 ggaggcggcgaggcggcgct 4087965



 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 63      ggaggcggcgaggcggcgc 81
               |||||||||||||||||||
Sbjct: 4088040 ggaggcggcgaggcggcgc 4088058
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>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06,
             complete sequence
          Length = 143730

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    tggaggcggcgaggcggcgc 81
             ||||||||||||||||||||
Sbjct: 20000 tggaggcggcgaggcggcgc 19981
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>gb|AE012255.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 163
            of 460 of the complete genome
          Length = 12201

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 116  gccgcgacctccgcacggcgcgctgggc 143
            ||||||||| | ||||||||||||||||
Sbjct: 6630 gccgcgaccacagcacggcgcgctgggc 6603
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 49      cgggcgatggagctggaggcggcg 72
               |||||||||||| |||||||||||
Sbjct: 1329919 cgggcgatggagatggaggcggcg 1329942
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>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    ggaggcggcgaggcggcgct 82
             ||||||||||||||||||||
Sbjct: 11422 ggaggcggcgaggcggcgct 11403



 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    ggaggcggcgaggcggcgc 81
             |||||||||||||||||||
Sbjct: 11328 ggaggcggcgaggcggcgc 11310
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 116     gccgcgacctccgcacggcgcgctgggc 143
               ||||||||| | ||||||||||||||||
Sbjct: 3236759 gccgcgaccacagcacggcgcgctgggc 3236786
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     tggaggcggcgaggcggcgc 81
              ||||||||||||||||||||
Sbjct: 489032 tggaggcggcgaggcggcgc 489013
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 101     ggctgcggtcgctgcgccgc 120
               ||||||||||||||||||||
Sbjct: 4690548 ggctgcggtcgctgcgccgc 4690567
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 63      ggaggcggcgaggcggcgct 82
               ||||||||||||||||||||
Sbjct: 4088057 ggaggcggcgaggcggcgct 4088076



 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 63      ggaggcggcgaggcggcgc 81
               |||||||||||||||||||
Sbjct: 4088151 ggaggcggcgaggcggcgc 4088169
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 51       ggcgatggagctggaggcggcgaggcggcgct 82
                |||||||| ||||| | |||||||||||||||
Sbjct: 33953587 ggcgatggtgctggtgacggcgaggcggcgct 33953556
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>ref|XM_215826.3| PREDICTED: Rattus norvegicus pantothenate kinase 2
           (Hallervorden-Spatz syndrome) (predicted)
           (Pank2_predicted), mRNA
          Length = 1878

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  ggaggcggcgaggcggcgct 82
           ||||||||||||||||||||
Sbjct: 148 ggaggcggcgaggcggcgct 167
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 57      ggagctggaggcggcgaggc 76
               ||||||||||||||||||||
Sbjct: 1818311 ggagctggaggcggcgaggc 1818292
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>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0003D09
          Length = 161970

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 51    ggcgatggagctggaggcggcgaggcggcgct 82
             |||||||| ||||| | |||||||||||||||
Sbjct: 85030 ggcgatggtgctggtgacggcgaggcggcgct 84999
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>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0698A06
          Length = 156514

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   ggctgcggtcgctgcgccgc 120
             ||||||||||||||||||||
Sbjct: 53147 ggctgcggtcgctgcgccgc 53166
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>dbj|AK070038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035D03, full
           insert sequence
          Length = 1277

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 101 ggctgcggtcgctgcgccgc 120
           ||||||||||||||||||||
Sbjct: 895 ggctgcggtcgctgcgccgc 914
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>gb|AF161183.1|AF161183 Burkholderia cepacia tryptophan halogenase (prnA), PrnB (prnB), PrnC
            (prnC), and PrnD (prnD) genes, complete cds
          Length = 8931

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 110  cgctgcgccgcgacctccgc 129
            ||||||||||||||||||||
Sbjct: 6372 cgctgcgccgcgacctccgc 6391
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>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13,
              complete sequence
          Length = 130249

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     tggaggcggcgaggcggcgc 81
              ||||||||||||||||||||
Sbjct: 127784 tggaggcggcgaggcggcgc 127765
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 57      ggagctggaggcggcgaggc 76
               ||||||||||||||||||||
Sbjct: 1494556 ggagctggaggcggcgaggc 1494537
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>emb|AL672284.15| Mouse DNA sequence from clone RP23-39I7 on chromosome X, complete
             sequence
          Length = 227918

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    gccagaaaagggagacaacc 42
             ||||||||||||||||||||
Sbjct: 82724 gccagaaaagggagacaacc 82705
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>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0059K16,
              complete sequence
          Length = 139615

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 96     ccgcgggctgcggtcgctg 114
              |||||||||||||||||||
Sbjct: 133390 ccgcgggctgcggtcgctg 133372
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>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006B22, complete sequence
          Length = 166052

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 96    ccgcgggctgcggtcgctg 114
             |||||||||||||||||||
Sbjct: 52510 ccgcgggctgcggtcgctg 52492
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>gb|AY524034.1| Paulownia tomentosa floricaula (FLO) mRNA, FLOA paralog, partial
           cds
          Length = 909

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 54  gatggagctggaggcggcg 72
           |||||||||||||||||||
Sbjct: 879 gatggagctggaggcggcg 861
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>ref|XM_421237.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 2700097O09
          (LOC423321), mRNA
          Length = 963

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                     
Query: 51 ggcgatggagctggaggcggcgaggcg 77
          ||||||||| |||||||||||| ||||
Sbjct: 6  ggcgatggaactggaggcggcgcggcg 32
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>ref|XM_323382.1| Neurospora crassa OR74A predicted protein (NCU04064.1) partial mRNA
          Length = 1815

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   ggagctggaggcggcgagg 75
            |||||||||||||||||||
Sbjct: 1656 ggagctggaggcggcgagg 1674
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>ref|XM_952586.1| Neurospora crassa OR74A hypothetical protein (NCU04064.1) partial
            mRNA
          Length = 1815

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   ggagctggaggcggcgagg 75
            |||||||||||||||||||
Sbjct: 1656 ggagctggaggcggcgagg 1674
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>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene
             cluster, complete sequence
          Length = 84868

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 141   ggccgacgacccggcgcagctcg 163
             |||| ||||||||||||||||||
Sbjct: 40350 ggcccacgacccggcgcagctcg 40328
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>gb|AY530548.1| Leucocarpus perfoliatus floricaula (FLO) mRNA, FLOA paralog,
           partial cds
          Length = 921

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 54  gatggagctggaggcggcg 72
           |||||||||||||||||||
Sbjct: 891 gatggagctggaggcggcg 873
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>ref|XM_992071.1| PREDICTED: Mus musculus hypothetical protein LOC672244 (LOC672244),
           mRNA
          Length = 1170

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 77  ggcgcttccagctctggct 95
           |||||||||||||||||||
Sbjct: 542 ggcgcttccagctctggct 524
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>ref|XM_906868.2| PREDICTED: Mus musculus RIKEN cDNA 2410012M07 gene (2410012M07Rik),
           mRNA
          Length = 1813

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 77  ggcgcttccagctctggct 95
           |||||||||||||||||||
Sbjct: 377 ggcgcttccagctctggct 359
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>ref|XM_906832.2| PREDICTED: Mus musculus hypothetical LOC623166 (LOC623166), mRNA
          Length = 870

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 77  ggcgcttccagctctggct 95
           |||||||||||||||||||
Sbjct: 242 ggcgcttccagctctggct 224
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>ref|XM_887600.2| PREDICTED: Mus musculus hypothetical LOC623166 (LOC623166), mRNA
          Length = 777

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 77  ggcgcttccagctctggct 95
           |||||||||||||||||||
Sbjct: 149 ggcgcttccagctctggct 131
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>ref|XM_744966.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g03090) partial
            mRNA
          Length = 1584

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 80   gcttccagctctggctccgcggg 102
            |||||| ||||||||||||||||
Sbjct: 1169 gcttcctgctctggctccgcggg 1191
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>gb|AF391808.2| Zea mays chromosome 9S bz genomic region strain McC
          Length = 226001

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 101    ggctgcggtcgctgcgccg 119
              |||||||||||||||||||
Sbjct: 197583 ggctgcggtcgctgcgccg 197601
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>gb|AC121937.2| Mus musculus BAC clone RP24-207M20 from 9, complete sequence
          Length = 169399

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 77     ggcgcttccagctctggct 95
              |||||||||||||||||||
Sbjct: 118046 ggcgcttccagctctggct 118028
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 139     tgggccgacgacccggcgc 157
               |||||||||||||||||||
Sbjct: 2299987 tgggccgacgacccggcgc 2300005
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 148     gacccggcgcagctcgcca 166
               |||||||||||||||||||
Sbjct: 1931081 gacccggcgcagctcgcca 1931099
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>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 116    gccgcgacctccgcacggcgcgc 138
              |||||||||||||| ||||||||
Sbjct: 115039 gccgcgacctccgcccggcgcgc 115017
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>emb|AJ440002.1|OSA440002 Oryza sativa (japonica cultivar-group) a4 gene for plasma membrane H+
            ATPase, exons 1-12
          Length = 3894

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 96   ccgcgggctgcggtcgctg 114
            |||||||||||||||||||
Sbjct: 2065 ccgcgggctgcggtcgctg 2083
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 148     gacccggcgcagctcgcca 166
               |||||||||||||||||||
Sbjct: 4650106 gacccggcgcagctcgcca 4650124
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>gb|AF448416.1| Zea mays B73 chromosome 9S bz genomic region
          Length = 106186

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 101   ggctgcggtcgctgcgccg 119
             |||||||||||||||||||
Sbjct: 79202 ggctgcggtcgctgcgccg 79220
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>gb|AC010477.8| Homo sapiens chromosome 5 clone CTD-2313D3, complete sequence
          Length = 130888

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 147   cgacccggcgcagctcgcc 165
             |||||||||||||||||||
Sbjct: 30328 cgacccggcgcagctcgcc 30346
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>gb|AC010638.7|AC010638 Homo sapiens chromosome 5 clone CTD-2350J17, complete sequence
          Length = 129298

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 147  cgacccggcgcagctcgcc 165
            |||||||||||||||||||
Sbjct: 2660 cgacccggcgcagctcgcc 2642
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 147    cgacccggcgcagctcgcc 165
              |||||||||||||||||||
Sbjct: 770565 cgacccggcgcagctcgcc 770547
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 63       ggaggcggcgaggcggcgc 81
                |||||||||||||||||||
Sbjct: 20397797 ggaggcggcgaggcggcgc 20397815
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 142     gccgacgacccggcgcagc 160
               |||||||||||||||||||
Sbjct: 4679132 gccgacgacccggcgcagc 4679114
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 143     ccgacgacccggcgcagctcgcc 165
               ||||||||||||||| |||||||
Sbjct: 1410955 ccgacgacccggcgcggctcgcc 1410977
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 97      cgcgggctgcggtcgctgc 115
               |||||||||||||||||||
Sbjct: 3655715 cgcgggctgcggtcgctgc 3655697
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>dbj|AK100483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097B04, full
            insert sequence
          Length = 3538

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 96   ccgcgggctgcggtcgctg 114
            |||||||||||||||||||
Sbjct: 1596 ccgcgggctgcggtcgctg 1614
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 132     ggcgcgctgggccgacgac 150
               |||||||||||||||||||
Sbjct: 2690203 ggcgcgctgggccgacgac 2690185



 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 132     ggcgcgctgggccgacgac 150
               |||||||||||||||||||
Sbjct: 2049702 ggcgcgctgggccgacgac 2049684
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>gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence
          Length = 203581

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 101   ggctgcggtcgctgcgccg 119
             |||||||||||||||||||
Sbjct: 67836 ggctgcggtcgctgcgccg 67854
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>gb|AC174930.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBa0043H01, from
            chromosome 4, complete sequence
          Length = 15426

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 64   gaggcggcgaggcggcgcttcca 86
            |||||||||||||||||| ||||
Sbjct: 8377 gaggcggcgaggcggcgcctcca 8355
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 63       ggaggcggcgaggcggcgc 81
                |||||||||||||||||||
Sbjct: 20324011 ggaggcggcgaggcggcgc 20324029
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>emb|BX000456.3|CNS08CDD Oryza sativa chromosome 12, . BAC OSJNBa0050D07 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 185820

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 63     ggaggcggcgaggcggcgc 81
              |||||||||||||||||||
Sbjct: 113904 ggaggcggcgaggcggcgc 113886
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>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1,
             ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10,
             ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and
             ORF19
          Length = 86080

 Score = 38.2 bits (19), Expect = 8.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 141   ggccgacgacccggcgcagctcg 163
             |||| ||||||||||||||||||
Sbjct: 40268 ggcccacgacccggcgcagctcg 40246


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,136,126
Number of Sequences: 3902068
Number of extensions: 1136126
Number of successful extensions: 138703
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135136
Number of HSP's gapped (non-prelim): 3567
length of query: 166
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 144
effective length of database: 17,147,199,772
effective search space: 2469196767168
effective search space used: 2469196767168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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