ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast22e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF043091.1|AF043091 Hordeum vulgare dehydrin 6 (dhn6) gene, c... 192 1e-46
2gb|AF181456.1|AF181456 Hordeum vulgare dehydrin (Dhn6) mRNA, com... 58 5e-06
3ref|NM_031216.3| Homo sapiens SEH1-like (S. cerevisiae) (SEH1L),... 42 0.29
4gb|BC012430.1| Homo sapiens SEH1-like (S. cerevisiae), mRNA (cDN... 42 0.29
5gb|AF255625.1| Homo sapiens putative nucleoporin protein SEH1A (... 42 0.29
6gb|AF136976.1|AF136976 Homo sapiens sec13-like protein mRNA, com... 42 0.29
7gb|AC122218.4| Mus musculus BAC clone RP23-118J7 from chromosome... 42 0.29
8dbj|AP001357.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 0.29
9dbj|AP002449.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 0.29
10emb|BX538037.1|HSM806205 Homo sapiens mRNA; cDNA DKFZp686H12115 ... 42 0.29
11gb|AC087840.16| Mus musculus strain C57BL/6J chromosome 16 clone... 42 0.29
12gb|BC046014.1| Danio rerio wu:fb33b12, mRNA (cDNA clone IMAGE:56... 40 1.1
13gb|AC117465.13| Homo sapiens 3 BAC RP11-706D8 (Roswell Park Canc... 40 1.1
14gb|AC087069.3| Homo sapiens chromosome 7 clone RP11-7P19, comple... 40 1.1
15gb|AC158680.4| Mus musculus 6 BAC RP23-112F6 (Roswell Park Cance... 40 1.1
16gb|AC153803.1| Mus musculus 6 BAC RP24-276E19 (Roswell Park Canc... 40 1.1
17gb|AC163610.4| Mus musculus BAC clone RP23-59P17 from chromosome... 38 4.5
18ref|XM_473467.1| Oryza sativa (japonica cultivar-group), predic... 38 4.5
19gb|AY250742.2| Reissita simonyi clone RS-5 microsatellite sequence 38 4.5
20gb|AC123624.13| Mus musculus chromosome 16, clone RP23-133E12, c... 38 4.5
21gb|AC125262.9| Mus musculus chromosome 8, clone RP24-314K18, com... 38 4.5
22gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome... 38 4.5
23ref|XM_455671.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F13134g ... 38 4.5
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 4.5
25ref|XM_752232.1| Ustilago maydis 521 hypothetical protein (UM011... 38 4.5
26gb|AC125056.3| Mus musculus BAC clone RP23-398G2 from chromosome... 38 4.5
27emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 38 4.5
28gb|AC095787.7| Rattus norvegicus 14 BAC CH230-9M3 (Children's Ho... 38 4.5
29emb|AL772146.4| Zebrafish DNA sequence from clone CH211-12P8 in ... 38 4.5
30emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4,... 38 4.5
31gb|AC090638.11| Homo sapiens chromosome 18, clone RP11-429H5, co... 38 4.5
32gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare str... 38 4.5
33ref|XM_685932.1| PREDICTED: Danio rerio similar to epidermal gro... 38 4.5
34gb|AC009202.7| Drosophila melanogaster, chromosome 2L, region 36... 38 4.5
35emb|BX890584.6| Mouse DNA sequence from clone RP23-160I11 on chr... 38 4.5
36dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
37gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome... 38 4.5
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
39dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.5
40gb|AC098718.5| Mus musculus BAC clone RP23-2K11 from chromosome ... 38 4.5
41emb|AL807744.7| Mouse DNA sequence from clone RP23-174C4 on chro... 38 4.5
42dbj|AK111704.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.5
43ref|XM_551860.1| Anopheles gambiae str. PEST ENSANGP00000027132 ... 38 4.5
44dbj|AK065049.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 4.5
45gb|AF060568.1|AF060568 Homo sapiens promyelocytic leukemia zinc ... 38 4.5
46gb|AE003656.2| Drosophila melanogaster chromosome 2L, section 65... 38 4.5
47gb|AC001234.1|AC001234 Homo sapiens Chromosome 11q23 PAC clone p... 38 4.5
48dbj|AP000908.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 38 4.5
49gb|AC173115.2| Mus musculus BAC clone RP23-26D2 from chromosome ... 38 4.5
50emb|AL596446.11| Mouse DNA sequence from clone RP23-386E10 on ch... 38 4.5
51gb|AC169518.1| Mus musculus chromosome 8, clone RP23-454H8, comp... 38 4.5 
>gb|AF043091.1|AF043091 Hordeum vulgare dehydrin 6 (dhn6) gene, complete cds
          Length = 3086

 Score =  192 bits (97), Expect = 1e-46
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                       
Query: 6   gcatccgcttgacattgacaatccgattcaatccacagccaagaacacacactcacagca 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 gcatccgcttgacattgacaatccgattcaatccacagccaagaacacacactcacagca 767

                                                
Query: 66  gcagcaagcaatccgtgaagcgaagagatggcgcatt 102
           |||||||||||||||||||||||||||||||||||||
Sbjct: 768 gcagcaagcaatccgtgaagcgaagagatggcgcatt 804
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>gb|AF181456.1|AF181456 Hordeum vulgare dehydrin (Dhn6) mRNA, complete cds
          Length = 1637

 Score = 58.0 bits (29), Expect = 5e-06
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 74  caatccgtgaagcgaagagatggcgcatt 102
           |||||||||||||||||||||||||||||
Sbjct: 1   caatccgtgaagcgaagagatggcgcatt 29
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>ref|NM_031216.3| Homo sapiens SEH1-like (S. cerevisiae) (SEH1L), transcript variant 2,
            mRNA
          Length = 3513

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 55   cactcacagcagcagcaagca 75
            |||||||||||||||||||||
Sbjct: 2434 cactcacagcagcagcaagca 2414
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>gb|BC012430.1| Homo sapiens SEH1-like (S. cerevisiae), mRNA (cDNA clone MGC:21489
            IMAGE:3865994), complete cds
          Length = 3497

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 55   cactcacagcagcagcaagca 75
            |||||||||||||||||||||
Sbjct: 2388 cactcacagcagcagcaagca 2368
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>gb|AF255625.1| Homo sapiens putative nucleoporin protein SEH1A (SEH1) mRNA, complete
            cds
          Length = 3431

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 55   cactcacagcagcagcaagca 75
            |||||||||||||||||||||
Sbjct: 2338 cactcacagcagcagcaagca 2318
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>gb|AF136976.1|AF136976 Homo sapiens sec13-like protein mRNA, complete cds
          Length = 3492

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 55   cactcacagcagcagcaagca 75
            |||||||||||||||||||||
Sbjct: 2411 cactcacagcagcagcaagca 2391
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>gb|AC122218.4| Mus musculus BAC clone RP23-118J7 from chromosome 16, complete sequence
          Length = 196599

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 32    ttcaatccacagccaagaacacaca 56
             ||||||||||||||||||| |||||
Sbjct: 10909 ttcaatccacagccaagaagacaca 10933
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>dbj|AP001357.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-807E13, complete
            sequence
          Length = 182382

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 55   cactcacagcagcagcaagca 75
            |||||||||||||||||||||
Sbjct: 2143 cactcacagcagcagcaagca 2123
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>dbj|AP002449.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-773H22, complete
              sequence
          Length = 184000

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 55     cactcacagcagcagcaagca 75
              |||||||||||||||||||||
Sbjct: 134894 cactcacagcagcagcaagca 134874
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>emb|BX538037.1|HSM806205 Homo sapiens mRNA; cDNA DKFZp686H12115 (from clone DKFZp686H12115)
          Length = 5325

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 55   cactcacagcagcagcaagca 75
            |||||||||||||||||||||
Sbjct: 4143 cactcacagcagcagcaagca 4123
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>gb|AC087840.16| Mus musculus strain C57BL/6J chromosome 16 clone rp23-240k10, complete
              sequence
          Length = 190761

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 32     ttcaatccacagccaagaacacaca 56
              ||||||||||||||||||| |||||
Sbjct: 141113 ttcaatccacagccaagaagacaca 141137
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>gb|BC046014.1| Danio rerio wu:fb33b12, mRNA (cDNA clone IMAGE:5601434), partial
           cds
          Length = 1382

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 50  acacacactcacagcagcagcaag 73
           |||||||| |||||||||||||||
Sbjct: 633 acacacacacacagcagcagcaag 656
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>gb|AC117465.13| Homo sapiens 3 BAC RP11-706D8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 195231

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 50     acacacactcacagcagcagcaag 73
              |||||||| |||||||||||||||
Sbjct: 111944 acacacacacacagcagcagcaag 111921
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>gb|AC087069.3| Homo sapiens chromosome 7 clone RP11-7P19, complete sequence
          Length = 159620

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 50    acacacactcacagcagcagcaagcaat 77
             |||||||| |||||||||||||| ||||
Sbjct: 81842 acacacacacacagcagcagcaatcaat 81869
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>gb|AC158680.4| Mus musculus 6 BAC RP23-112F6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 206705

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    acacacactcacagcagcag 69
             ||||||||||||||||||||
Sbjct: 45054 acacacactcacagcagcag 45035
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>gb|AC153803.1| Mus musculus 6 BAC RP24-276E19 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 155295

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    acacacactcacagcagcag 69
             ||||||||||||||||||||
Sbjct: 24499 acacacactcacagcagcag 24518
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>gb|AC163610.4| Mus musculus BAC clone RP23-59P17 from chromosome 13, complete sequence
          Length = 237111

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 50    acacacactcacagcagcagcaa 72
             ||||||| |||||||||||||||
Sbjct: 31336 acacacattcacagcagcagcaa 31358
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>ref|XM_473467.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1704

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 57 ctcacagcagcagcaagca 75
          |||||||||||||||||||
Sbjct: 83 ctcacagcagcagcaagca 65
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>gb|AY250742.2| Reissita simonyi clone RS-5 microsatellite sequence
          Length = 473

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 50 acacacactcacagcagcagcaa 72
          |||||||| ||||||||||||||
Sbjct: 33 acacacacacacagcagcagcaa 55
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>gb|AC123624.13| Mus musculus chromosome 16, clone RP23-133E12, complete sequence
          Length = 214202

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 39     cacagccaagaacacacac 57
              |||||||||||||||||||
Sbjct: 136149 cacagccaagaacacacac 136167
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>gb|AC125262.9| Mus musculus chromosome 8, clone RP24-314K18, complete sequence
          Length = 185119

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    gattcaatccacagccaag 48
             |||||||||||||||||||
Sbjct: 59207 gattcaatccacagccaag 59189
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>gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0033D06,
              complete sequence
          Length = 142659

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 40     acagccaagaacacacact 58
              |||||||||||||||||||
Sbjct: 115594 acagccaagaacacacact 115576
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>ref|XM_455671.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F13134g predicted mRNA
          Length = 1185

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 13  cttgacattgacaatccga 31
           |||||||||||||||||||
Sbjct: 571 cttgacattgacaatccga 589
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 35      aatccacagccaagaacac 53
               |||||||||||||||||||
Sbjct: 9174974 aatccacagccaagaacac 9174956
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>ref|XM_752232.1| Ustilago maydis 521 hypothetical protein (UM01178.1) partial mRNA
          Length = 6855

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 61   cagcagcagcaagcaatcc 79
            |||||||||||||||||||
Sbjct: 6681 cagcagcagcaagcaatcc 6699
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>gb|AC125056.3| Mus musculus BAC clone RP23-398G2 from chromosome 14, complete sequence
          Length = 204350

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 50     acacacactcacagcagcagcaa 72
              ||||||||||||| |||||||||
Sbjct: 177527 acacacactcacaccagcagcaa 177549
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>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2602197

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 13      cttgacattgacaatccga 31
               |||||||||||||||||||
Sbjct: 1212639 cttgacattgacaatccga 1212621
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>gb|AC095787.7| Rattus norvegicus 14 BAC CH230-9M3 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 242500

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 45    caagaacacacactcacag 63
             |||||||||||||||||||
Sbjct: 39817 caagaacacacactcacag 39799
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>emb|AL772146.4| Zebrafish DNA sequence from clone CH211-12P8 in linkage group 7
             Contains part of a novel gene similar to SCRIB
             (scrribble), a novel gene similar to SIAHBP1 (fuse-binding
             protein-interacting repressor), a novel gene similar to
             HTR5A (5-hydroxytryptamine (serotonin) receptor 5A) and
             three CpG islands, complete sequence
          Length = 187241

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 50    acacacactcacagcagcagcaa 72
             |||||| ||||||||||||||||
Sbjct: 99344 acacactctcacagcagcagcaa 99366
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>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17,
             complete sequence
          Length = 167269

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    ctcacagcagcagcaagca 75
             |||||||||||||||||||
Sbjct: 25708 ctcacagcagcagcaagca 25726
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>gb|AC090638.11| Homo sapiens chromosome 18, clone RP11-429H5, complete sequence
          Length = 180429

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 58     tcacagcagcagcaagcaa 76
              |||||||||||||||||||
Sbjct: 130594 tcacagcagcagcaagcaa 130612
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>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0032O19, from chromosome 3, complete sequence
          Length = 142248

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 35     aatccacagccaagaacac 53
              |||||||||||||||||||
Sbjct: 111417 aatccacagccaagaacac 111435
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>ref|XM_685932.1| PREDICTED: Danio rerio similar to epidermal growth factor
          receptor pathway substrate 15 (LOC562550), mRNA
          Length = 1887

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 53 cacactcacagcagcagca 71
          |||||||||||||||||||
Sbjct: 30 cacactcacagcagcagca 48
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>gb|AC009202.7| Drosophila melanogaster, chromosome 2L, region 36D-36D, BAC clone
             BACR06C11, complete sequence
          Length = 174500

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    acacacactcacagcagca 68
             |||||||||||||||||||
Sbjct: 83015 acacacactcacagcagca 82997
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>emb|BX890584.6| Mouse DNA sequence from clone RP23-160I11 on chromosome X, complete
             sequence
          Length = 120359

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 40    acagccaagaacacacactcaca 62
             |||||||||||||||||| ||||
Sbjct: 93107 acagccaagaacacacacacaca 93085
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 57       ctcacagcagcagcaagca 75
                |||||||||||||||||||
Sbjct: 27862855 ctcacagcagcagcaagca 27862873
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>gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0016G06,
              complete sequence
          Length = 119910

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 35     aatccacagccaagaacac 53
              |||||||||||||||||||
Sbjct: 118154 aatccacagccaagaacac 118136
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 40      acagccaagaacacacact 58
               |||||||||||||||||||
Sbjct: 1802865 acagccaagaacacacact 1802847
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 35      aatccacagccaagaacac 53
               |||||||||||||||||||
Sbjct: 9172807 aatccacagccaagaacac 9172789
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>gb|AC098718.5| Mus musculus BAC clone RP23-2K11 from chromosome 14, complete sequence
          Length = 199906

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 50    acacacactcacagcagcagcaa 72
             ||||||||||||| |||||||||
Sbjct: 60236 acacacactcacaccagcagcaa 60214
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>emb|AL807744.7| Mouse DNA sequence from clone RP23-174C4 on chromosome X, complete
             sequence
          Length = 163576

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 50    acacacactcacagcagcagcaa 72
             |||||||| ||||||||||||||
Sbjct: 53425 acacacacacacagcagcagcaa 53447
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>dbj|AK111704.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013E24, full
           insert sequence
          Length = 1983

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 57  ctcacagcagcagcaagca 75
           |||||||||||||||||||
Sbjct: 219 ctcacagcagcagcaagca 201
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>ref|XM_551860.1| Anopheles gambiae str. PEST ENSANGP00000027132
           (ENSANGG00000025023), partial mRNA
          Length = 650

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 60  acagcagcagcaagcaatc 78
           |||||||||||||||||||
Sbjct: 121 acagcagcagcaagcaatc 103
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>dbj|AK065049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I13, full
            insert sequence
          Length = 1553

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 40   acagccaagaacacacact 58
            |||||||||||||||||||
Sbjct: 1551 acagccaagaacacacact 1533
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>gb|AF060568.1|AF060568 Homo sapiens promyelocytic leukemia zinc finger protein (PLZF) gene,
             complete cds
          Length = 201239

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 58    tcacagcagcagcaagcaa 76
             |||||||||||||||||||
Sbjct: 38191 tcacagcagcagcaagcaa 38173
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>gb|AE003656.2| Drosophila melanogaster chromosome 2L, section 65 of 83 of the complete
              sequence
          Length = 251192

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     acacacactcacagcagca 68
              |||||||||||||||||||
Sbjct: 113512 acacacactcacagcagca 113494
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>gb|AC001234.1|AC001234 Homo sapiens Chromosome 11q23 PAC clone pDJ149k2 containing PLZF gene
              encoding kruppel-like zinc finger protein, complete
              sequence
          Length = 160748

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 58     tcacagcagcagcaagcaa 76
              |||||||||||||||||||
Sbjct: 158778 tcacagcagcagcaagcaa 158796
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>dbj|AP000908.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-711K22, complete
              sequence
          Length = 149132

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 58     tcacagcagcagcaagcaa 76
              |||||||||||||||||||
Sbjct: 140219 tcacagcagcagcaagcaa 140201
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>gb|AC173115.2| Mus musculus BAC clone RP23-26D2 from chromosome 13, complete sequence
          Length = 221491

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 50    acacacactcacagcagcagcaa 72
             ||||||| |||||||||||||||
Sbjct: 71421 acacacattcacagcagcagcaa 71399
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>emb|AL596446.11| Mouse DNA sequence from clone RP23-386E10 on chromosome 11, complete
             sequence
          Length = 191735

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 45    caagaacacacactcacag 63
             |||||||||||||||||||
Sbjct: 43823 caagaacacacactcacag 43805
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>gb|AC169518.1| Mus musculus chromosome 8, clone RP23-454H8, complete sequence
          Length = 194822

 Score = 38.2 bits (19), Expect = 4.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 30     gattcaatccacagccaag 48
              |||||||||||||||||||
Sbjct: 111045 gattcaatccacagccaag 111027


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,405,365
Number of Sequences: 3902068
Number of extensions: 1405365
Number of successful extensions: 148525
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 148263
Number of HSP's gapped (non-prelim): 262
length of query: 102
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 81
effective length of database: 17,151,101,840
effective search space: 1389239249040
effective search space used: 1389239249040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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