ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast22c04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC107959.8| Homo sapiens chromosome 8, clone RP11-875O11, complete sequence Length = 211291 Score = 46.1 bits (23), Expect = 0.077 Identities = 23/23 (100%) Strand = Plus / Plus Query: 285 agagtccaagggagggagggaga 307 ||||||||||||||||||||||| Sbjct: 147515 agagtccaagggagggagggaga 147537
>gb|AC103621.6| Mus musculus chromosome 5, clone RP24-230J14, complete sequence Length = 169247 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 cagggagccagggagagaggga 257 |||||||||||||||||||||| Sbjct: 30510 cagggagccagggagagaggga 30531
>gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromosome 22, complete sequence Length = 209755 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 81749 ctcatctcatctcatcatttcatcat 81724 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 82205 tcatctcatctcatcatttcatcat 82181
>gb|AC147648.4| Homo sapiens BAC clone RP11-1413M17 from UL, complete sequence Length = 188992 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 166650 ctcatctcatctcatcatttcatcat 166675 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 167271 tcatctcatctcatcatttcatcat 167295 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 167106 ctcatctcatctcatcatttcatc 167129
>gb|AC145613.2| Homo sapiens BAC clone RP11-1266H24 from UL, complete sequence Length = 178925 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 144409 ctcatctcatctcatcatttcatcat 144434 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 143784 ctcatctcatctcatcatttcatcat 143809 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 144240 ctcatctcatctcatcatttcatc 144263
>gb|AC142384.2| Homo sapiens chromosome 16 clone RP11-293B20, complete sequence Length = 182907 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 165790 ctcatctcatctcatcatttcatcat 165765 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 164739 tcatctcatctcatcatttcatcat 164715 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 163570 tcatctcatctcatcatttcatcat 163546 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 164585 ctcatctcatctcatcatttcatc 164562
>gb|AC087386.7| Homo sapiens chromosome 15, clone RP11-173D3, complete sequence Length = 155343 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 140016 ctcatctcatctcatcatttcatcat 140041 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 catctcatctcatcatatcatcat 109 |||||||||||||||| ||||||| Sbjct: 140767 catctcatctcatcatttcatcat 140790 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 139795 ctcatctcatctcatcatttcatc 139818
>emb|AL034582.11|HS594I10 Human DNA sequence from clone RP4-594I10 on chromosome 1p33-35.3 Contains the DSCR1L2 gene for Down syndrome critical region gene 1-like 2 and a CpG island, complete sequence Length = 46738 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 229 ggcagagcagggagccagggag 250 |||||||||||||||||||||| Sbjct: 16825 ggcagagcagggagccagggag 16846
>emb|BX538217.1|HSM806448 Homo sapiens genomic DNA; cDNA DKFZp686J24116 (from clone DKFZp686J24116) Length = 3675 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 1513 ctcatctcatctcatcatttcatcat 1488 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 1971 tcatctcatctcatcatttcatcat 1947
>gb|AC106029.8| Homo sapiens chromosome 15, clone CTD-2538I11, complete sequence Length = 180591 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 28713 ctcatctcatctcatcatttcatcat 28688 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 28766 ctcatctcatctcatcatttcatc 28743 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 27790 ctcatctcatctcatcatttcatc 27767
>gb|AC026495.13| Homo sapiens chromosome 15, clone RP11-509A17, complete sequence Length = 188605 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 28645 ctcatctcatctcatcatttcatcat 28620 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 27316 tcatctcatctcatcatttcatcat 27292 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 28698 ctcatctcatctcatcatttcatc 28675 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 27728 ctcatctcatctcatcatttcatc 27705
>emb|CR381572.5| Human DNA sequence from clone bP-2168N6 on chromosome 21, complete sequence Length = 184355 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 141382 ctcatctcatctcatcatttcatcat 141357 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 140760 ctcatctcatctcatcatttcatcat 140735 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 140926 ctcatctcatctcatcatttcatc 140903
>gb|AC122174.18| Pan troglodytes clone rp43-98a5, complete sequence Length = 148732 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 134388 ctcatctcatctcatcatttcatcat 134413
>gb|AC123980.19| Pan troglodytes clone rp43-118j16, complete sequence Length = 145016 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 13126 ctcatctcatctcatcatttcatcat 13151 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 12670 tcatctcatctcatcatttcatcat 12694
>gb|AC126335.16| Homo sapiens chromosome 15, clone RP11-854K16, complete sequence Length = 178738 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 128372 ctcatctcatctcatcatttcatcat 128397 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 catctcatctcatcatatcatcat 109 |||||||||||||||| ||||||| Sbjct: 129131 catctcatctcatcatttcatcat 129154 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 128974 ctcatctcatctcatcatttcatc 128997 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 128151 ctcatctcatctcatcatttcatc 128174
>gb|AC139476.3| Homo sapiens chromosome 16 clone RP11-341P6, complete sequence Length = 189057 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 64668 ctcatctcatctcatcatttcatcat 64693 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 66888 tcatctcatctcatcatttcatcat 66912 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 65719 tcatctcatctcatcatttcatcat 65743 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 66764 ctcatctcatctcatcatttcatc 66787 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 65878 ctcatctcatctcatcatttcatc 65901
>gb|AC126603.9| Homo sapiens chromosome 15, clone RP11-492D6, complete sequence Length = 189363 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 185640 ctcatctcatctcatcatttcatcat 185615 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 11342 ctcatctcatctcatcatttcatcat 11367 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 184311 tcatctcatctcatcatttcatcat 184287 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 185693 ctcatctcatctcatcatttcatc 185670 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 184723 ctcatctcatctcatcatttcatc 184700 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 catctcatctcatcatatcatcat 109 |||||||||||||||| ||||||| Sbjct: 12098 catctcatctcatcatttcatcat 12121 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 11944 ctcatctcatctcatcatttcatc 11967 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 11121 ctcatctcatctcatcatttcatc 11144
>gb|AC145217.2| Homo sapiens BAC clone RP11-527C10 from 2, complete sequence Length = 138179 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 94120 ctcatctcatctcatcatttcatcat 94145
>gb|AC018696.4| Homo sapiens BAC clone RP11-575H3 from 2, complete sequence Length = 194995 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 51432 ctcatctcatctcatcatttcatcat 51407
>gb|AC116050.3| Homo sapiens BAC clone RP11-427F2 from 2, complete sequence Length = 165225 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 23207 ctcatctcatctcatcatttcatcat 23232
>gb|AC136944.3| Homo sapiens chromosome 16 clone RP11-23E10, complete sequence Length = 142696 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 96228 ctcatctcatctcatcatttcatcat 96253 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 98448 tcatctcatctcatcatttcatcat 98472 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 97279 tcatctcatctcatcatttcatcat 97303 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 97433 ctcatctcatctcatcatttcatc 97456
>gb|AC068279.6| Homo sapiens BAC clone RP11-153P14 from 2, complete sequence Length = 135351 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 59611 ctcatctcatctcatcatttcatcat 59586 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 58107 ctcatctcatctcatcatttcatcat 58082 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 59034 ctcatctcatctcatcatttcatc 59011 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 57512 ctcatctcatctcatcatttcatc 57489 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 57459 ctcatctcatctcatcatttcatc 57436 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 56428 ctcatctcatctcatcatttcatc 56405 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 catctcatctcatcatatcatcat 109 |||||||||||||||| ||||||| Sbjct: 55507 catctcatctcatcatttcatcat 55484 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 54931 ctcatctcatctcatcatttcatc 54908 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 54875 ctcatctcatctcatcatttcatc 54852
>gb|AC034151.6| Homo sapiens BAC clone RP11-168J1 from 2, complete sequence Length = 157666 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 60524 ctcatctcatctcatcatttcatcat 60499 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 60265 ctcatctcatctcatcatttcatcat 60240 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 atctcatctcatcatatcatc 107 ||||||||||||||||||||| Sbjct: 61361 atctcatctcatcatatcatc 61341 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 59204 tcatctcatctcatcatttcatcat 59180 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatca 108 ||||||||||||||||| |||||| Sbjct: 61332 tcatctcatctcatcatttcatca 61309 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 59577 ctcatctcatctcatcatttcatc 59554
>gb|AC128677.4| Homo sapiens BAC clone RP11-271A22 from 2, complete sequence Length = 158087 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 81117 ctcatctcatctcatcatttcatcat 81092 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 80858 ctcatctcatctcatcatttcatcat 80833 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 atctcatctcatcatatcatc 107 ||||||||||||||||||||| Sbjct: 81954 atctcatctcatcatatcatc 81934 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 79777 tcatctcatctcatcatttcatcat 79753 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatca 108 ||||||||||||||||| |||||| Sbjct: 81925 tcatctcatctcatcatttcatca 81902 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 80170 ctcatctcatctcatcatttcatc 80147
>gb|AC127533.9| Homo sapiens chromosome 15, clone RP11-1363O20, complete sequence Length = 165791 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 117889 ctcatctcatctcatcatttcatcat 117864 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 116959 ctcatctcatctcatcatttcatc 116936
>gb|AC134678.7| Homo sapiens chromosome 15, clone RP13-199M12, complete sequence Length = 200389 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 84658 ctcatctcatctcatcatttcatcat 84683 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 86054 tcatctcatctcatcatttcatcat 86078 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 85645 ctcatctcatctcatcatttcatc 85668
>gb|AC133920.2| Homo sapiens chromosome 16 clone RP11-413O9, complete sequence Length = 197357 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 163537 ctcatctcatctcatcatttcatcat 163562 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 165754 tcatctcatctcatcatttcatcat 165778 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 164585 tcatctcatctcatcatttcatcat 164609 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 43946 tcatctcatctcatcatttcatcat 43922 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 165630 ctcatctcatctcatcatttcatc 165653 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 164744 ctcatctcatctcatcatttcatc 164767 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 46072 ctcatctcatctcatcatttcatc 46049
>gb|AC145614.3| Homo sapiens chromosome UNKNOWN clone RP11-1210E1, complete sequence Length = 188052 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 49346 ctcatctcatctcatcatttcatcat 49371 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 49874 ctcatctcatctcatcatttcatc 49897 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 47583 ctcatctcatctcatcatttcatc 47606 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 catctcatctcatcatatcatcat 109 |||||||||||||||| ||||||| Sbjct: 47054 catctcatctcatcatttcatcat 47077
>gb|AC144898.3| Homo sapiens chromosome UNKNOWN clone RP11-247L13, complete sequence Length = 155112 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 12366 ctcatctcatctcatcatttcatcat 12391 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 12894 ctcatctcatctcatcatttcatc 12917 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 10603 ctcatctcatctcatcatttcatc 10626 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 catctcatctcatcatatcatcat 109 |||||||||||||||| ||||||| Sbjct: 10074 catctcatctcatcatttcatcat 10097
>emb|BX546448.4| Human DNA sequence from clone RP11-509J10 on chromosome 22, complete sequence Length = 172149 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 41915 ctcatctcatctcatcatttcatcat 41940 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 41290 ctcatctcatctcatcatttcatcat 41315 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 41746 ctcatctcatctcatcatttcatc 41769
>gb|AC151602.4| Mus musculus BAC clone RP23-218K15 from chromosome 7, complete sequence Length = 249504 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Minus Query: 232 agagcagggagccagggagagaggga 257 ||||||||||| |||||||||||||| Sbjct: 178383 agagcagggagacagggagagaggga 178358
>ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@) on chromosome 22 Length = 909203 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 264444 ctcatctcatctcatcatttcatcat 264469 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 263986 tcatctcatctcatcatttcatcat 264010 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agggagccagggagagaggg 256 |||||||||||||||||||| Sbjct: 433501 agggagccagggagagaggg 433520
>dbj|D87003.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:2H8 Length = 43742 Score = 44.1 bits (22), Expect = 0.30 Identities = 25/26 (96%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcat 109 |||||||||||||||||| ||||||| Sbjct: 24811 ctcatctcatctcatcatttcatcat 24836 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 24353 tcatctcatctcatcatttcatcat 24377
>gb|AC118646.23| Mus musculus chromosome 15, clone RP24-116A18, complete sequence Length = 205272 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 tccaagggagggagggagaca 309 ||||||||||||||||||||| Sbjct: 92889 tccaagggagggagggagaca 92909
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 gcagggagccagggagagagg 255 ||||||||||||||||||||| Sbjct: 3873706 gcagggagccagggagagagg 3873686 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcatct 111 |||||||||||||||||| | ||||||| Sbjct: 34217012 ctcatctcatctcatcatcttatcatct 34217039
>gb|AC129778.5| Homo sapiens BAC clone RP11-1221G12 from UL, complete sequence Length = 236177 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 105412 tcatctcatctcatcatttcatcat 105388 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 107249 ctcatctcatctcatcatttcatc 107226 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 106416 ctcatctcatctcatcatttcatc 106393 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 105577 ctcatctcatctcatcatttcatc 105554
>gb|AC103600.8| Mus musculus chromosome 1, clone RP23-247F18, complete sequence Length = 199808 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 gggagagagggataagcaaag 266 ||||||||||||||||||||| Sbjct: 170908 gggagagagggataagcaaag 170888
>gb|AF430391.1| Penaeus esculentus microsatellite CSGES215 sequence Length = 386 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 tcatctcatcatatcatcatc 110 ||||||||||||||||||||| Sbjct: 47 tcatctcatcatatcatcatc 67
>emb|BX284632.11| Human DNA sequence from clone RP11-460E7 on chromosome 9 Contains a gene similar to COBW-like protein (LOC55871), the FOXD4L4 gene for forkhead box D4 like 4, an immunoglobulin kappa variable 1-5 (IGKV1-5) pseudogene, three novel pseudogenes, a pseudogene similar to part of tripartite motif-containing protein family, a pseudogene similar to part of BMS1-like, ribosome assembly protein (yeast) (BMS1L) and three CpG islands, complete sequence Length = 187806 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 33172 tcatctcatctcatcatttcatcat 33148 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 35009 ctcatctcatctcatcatttcatc 34986 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 34176 ctcatctcatctcatcatttcatc 34153 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 33337 ctcatctcatctcatcatttcatc 33314
>emb|AL133173.20| Human DNA sequence from clone RP11-453N3 on chromosome 10 Contains a RING finger protein 18 (RNF18) pseudogene, an actin-related protein 3 homolog (yeast) (ACTR3) pseudogene, a poly(A) cytoplasmic binding protein 3 (PABPC3) pseudogene, a gene for a novel protein similar to ATP-binding cassette sub-family D (ALD) member 1 (ABCD1), two novel genes and two CpG islands, complete sequence Length = 206192 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 atctcatctcatcatatcatc 107 ||||||||||||||||||||| Sbjct: 35485 atctcatctcatcatatcatc 35505
>emb|AL031601.4|HSY237C10 Human DNA sequence from clone XX-Y237C10 on chromosome 10 Contains a poly(A) binding protein, cytoplasmic 1 (PABPC1) pseudogene, an Ig kappa chain precursor V region pseudogene, a pseudogene similar to part of kinase suppressor of ras (KSR) and four CpG islands, complete sequence Length = 197700 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 atctcatctcatcatatcatc 107 ||||||||||||||||||||| Sbjct: 124790 atctcatctcatcatatcatc 124810 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 125888 ctcatctcatctcatcatttcatc 125911
>gb|AC113436.28| Pan troglodytes clone rp43-97f19, complete sequence Length = 166631 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 atctcatctcatcatatcatc 107 ||||||||||||||||||||| Sbjct: 93377 atctcatctcatcatatcatc 93357 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 92073 tcatctcatctcatcatttcatcat 92049
>dbj|AK135590.1| Mus musculus 1 day pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:7230401P11 product:unclassifiable, full insert sequence Length = 1870 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 agcccagctcatctcatctcatcat 101 |||||||||||||||||| |||||| Sbjct: 508 agcccagctcatctcatcccatcat 484
>gb|AC020760.6| Homo sapiens chromosome 16 clone RP11-151C19, complete sequence Length = 188872 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 atctcatctcatcatatcatc 107 ||||||||||||||||||||| Sbjct: 93171 atctcatctcatcatatcatc 93191
>gb|AC026273.7| Homo sapiens BAC clone CTD-2314M3 from 2, complete sequence Length = 144645 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 80556 tcatctcatctcatcatttcatcat 80532 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 79657 tcatctcatctcatcatttcatcat 79633
>gb|AC009091.9| Homo sapiens chromosome 16 clone RP11-408D2, complete sequence Length = 156273 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 tcatctcatctcatcatatcatcat 109 ||||||||||||||||| ||||||| Sbjct: 92080 tcatctcatctcatcatttcatcat 92056 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 94180 ctcatctcatctcatcatttcatc 94157
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 gcagggagccagggagagagg 255 ||||||||||||||||||||| Sbjct: 3873817 gcagggagccagggagagagg 3873797 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatcatct 111 |||||||||||||||||| | ||||||| Sbjct: 34307484 ctcatctcatctcatcatcttatcatct 34307511
>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015N19, complete sequence Length = 168430 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 gcagggagccagggagagagg 255 ||||||||||||||||||||| Sbjct: 80179 gcagggagccagggagagagg 80159
>gb|AC161198.5| Mus musculus chromosome 15, clone RP23-34E23, complete sequence Length = 237801 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 tccaagggagggagggagaca 309 ||||||||||||||||||||| Sbjct: 231558 tccaagggagggagggagaca 231578
>gb|AC087727.35| Mus musculus strain C57BL/6J chromosome 2 clone rp23-148b16, complete sequence Length = 202336 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 agcccagctcatctcatctcatcat 101 |||||||||||||||||| |||||| Sbjct: 14887 agcccagctcatctcatcccatcat 14863
>emb|AL772215.8| Mouse DNA sequence from clone RP23-114N20 on chromosome 2, complete sequence Length = 187537 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 agcccagctcatctcatctcatcat 101 |||||||||||||||||| |||||| Sbjct: 79141 agcccagctcatctcatcccatcat 79117
>emb|AL591711.22| Mouse DNA sequence from clone RP23-19L12 on chromosome 2, complete sequence Length = 197743 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 agggagccagggagagaggga 257 ||||||||||||||||||||| Sbjct: 49363 agggagccagggagagaggga 49343
>gb|AC145545.2| Homo sapiens chromosome UNKNOWN clone RP11-1365M9, complete sequence Length = 184813 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 91628 ctcatctcatctcatcatttcatc 91605 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 90966 ctcatctcatctcatcatttcatc 90943 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 catctcatctcatcatatcatcat 109 |||||||||||||||| ||||||| Sbjct: 90268 catctcatctcatcatttcatcat 90245 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 87806 ctcatctcatctcatcatttcatc 87783
>gb|AC132404.5| Mus musculus BAC clone RP23-328O21 from chromosome 17, complete sequence Length = 207685 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 agggagccagggagagaggg 256 |||||||||||||||||||| Sbjct: 13647 agggagccagggagagaggg 13628
>ref|XM_877988.1| PREDICTED: Bos taurus similar to WD repeat domain 24, transcript variant 6 (LOC507528), mRNA Length = 2943 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 gtccaagggagggagggaga 307 |||||||||||||||||||| Sbjct: 2083 gtccaagggagggagggaga 2064
>ref|NM_011242.1| Mus musculus RAS, guanyl releasing protein 2 (Rasgrp2), mRNA Length = 2250 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gcagagcagggagccaggga 249 |||||||||||||||||||| Sbjct: 2043 gcagagcagggagccaggga 2062
>gb|AC144621.3| Mus musculus BAC clone RP24-335I14 from chromosome 17, complete sequence Length = 207330 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 agggagccagggagagaggg 256 |||||||||||||||||||| Sbjct: 180614 agggagccagggagagaggg 180595
>gb|AC145616.2| Homo sapiens BAC clone RP11-1172A19 from UL, complete sequence Length = 172810 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 35762 ctcatctcatctcatcatttcatc 35739 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 35065 ctcatctcatctcatcatttcatc 35042
>gb|AC145547.3| Homo sapiens BAC clone RP11-1437O6 from UL, complete sequence Length = 185637 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 108312 ctcatctcatctcatcatttcatc 108289 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 107615 ctcatctcatctcatcatttcatc 107592
>gb|AC144916.3| Homo sapiens BAC clone RP11-15L7 from UL, complete sequence Length = 158759 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 143157 ctcatctcatctcatcatttcatc 143134
>gb|AC073901.5| Homo sapiens BAC clone RP11-222O23 from 7, complete sequence Length = 170654 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 85212 ctcatctcatctcatcatctcatc 85235
>gb|AF285175.1| Mus musculus PAX1 gene, complete cds Length = 17615 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 16060 ctcatctcatctcatcatctcatc 16083
>emb|AL845321.4| Human DNA sequence from clone RP11-236F9 on chromosome 9 Contains an aquaporin 7(AQP7) pseudogene, a novel gene, three novel pseudogenes, a pseudogene similar to part of BMS1-like, ribosome assembly protein (yeast)(BMS1L) and a CpG island, complete sequence Length = 158462 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 148435 ctcatctcatctcatcatttcatc 148412 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 147773 ctcatctcatctcatcatttcatc 147750 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 catctcatctcatcatatcatcat 109 |||||||||||||||| ||||||| Sbjct: 147075 catctcatctcatcatttcatcat 147052 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 144049 ctcatctcatctcatcatttcatc 144026
>emb|AL591379.18| Human DNA sequence from clone RP11-381O7 on chromosome 9 Contains an aquaporin 7 (AQP7) pseudogene, a novel gene, three novel pseudogenes, a pseudogene similar to part of BMS1-like, ribosome assembly protein (yeast) (BMS1L), a pseudogene similar to part of tripartite motif-containing family protein and a CpG island, complete sequence Length = 194491 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 catctcatctcatcatatcatcat 109 |||||||||||||||| ||||||| Sbjct: 32708 catctcatctcatcatttcatcat 32731 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 31544 ctcatctcatctcatcatttcatc 31567 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 30706 ctcatctcatctcatcatttcatc 30729 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 29659 ctcatctcatctcatcatttcatc 29682
>emb|AL512605.13| Human DNA sequence from clone RP11-15J10 on chromosome 9 Contains a pseudogene similar to part of COBW doamin family protein, the FOXD4L2 gene for forkhead box D4 like 2, an immunoglobulin kappa variable 1-5 (IGKV1-5) pseudogene, three novel pseudogenes, a pseudogene similar to part of cytochrome P450 family protein, a pseudogene similar to part of BMS1-like, ribosome assembly protein (yeast) (BMS1L) and four CpG islands, complete sequence Length = 158187 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 43826 ctcatctcatctcatcatttcatc 43803 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 43297 ctcatctcatctcatcatttcatc 43274 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 42456 ctcatctcatctcatcatttcatc 42433 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 catctcatctcatcatatcatcat 109 |||||||||||||||| ||||||| Sbjct: 41287 catctcatctcatcatttcatcat 41264
>emb|AL359955.25| Human DNA sequence from clone RP11-460N11 on chromosome 9 Contains a pseudogene similar to part of BMS1-like, ribosome assembly protein (yeast) (BMS1L) a immunoglobulin kappa variable 1-5 (IGKV1-5) pseudogene, three novel pseudogenes, a zinc finger pseudogene, a pseudogene similar to tripartite motif-containing protein and two CpG islands, complete sequence Length = 165474 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 36261 ctcatctcatctcatcatttcatc 36238 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 34394 ctcatctcatctcatcatttcatc 34371
>emb|AL355275.8| Human DNA sequence from clone RP11-416N18 on chromosome 10 Contains part of a novel gene, complete sequence Length = 94410 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatat 103 |||||||||||||||||||| Sbjct: 85795 ctcatctcatctcatcatat 85814
>emb|AL162425.15| Human DNA sequence from clone RP11-523L1 on chromosome 9 Contains the TNC gene for tenascin C (hexabrachion) (TN, HXB) and a novel gene, complete sequence Length = 177728 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 atctcatctcatcatatcat 106 |||||||||||||||||||| Sbjct: 84044 atctcatctcatcatatcat 84025
>emb|AL157823.9| Human DNA sequence from clone RP3-510O8 on chromosome 6 Contains the 5' end of the FKBP5 gene for FK506 binding protein 5 (FKBP51), four novel genes (including FLJ25390), a UMP-CMP (uridine monophosphate - cytidine monophosphate) kinase pseudogene, the CLPS gene for pancreatic colipase, the 5' end of a novel gene and two CpG islands, complete sequence Length = 127384 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gcagagcagggagccaggga 249 |||||||||||||||||||| Sbjct: 21109 gcagagcagggagccaggga 21128
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1753957 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ccagctcatctcatctcatc 99 |||||||||||||||||||| Sbjct: 1673689 ccagctcatctcatctcatc 1673670 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ccagctcatctcatctcatcatat 103 ||||||||||||||||||| |||| Sbjct: 1058490 ccagctcatctcatctcatgatat 1058513
>gb|AC087417.27| Mus musculus strain C57BL/6J chromosome 2 clone rp23-382b13, complete sequence Length = 225248 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 192083 ctcatctcatctcatcatctcatc 192060
>emb|CR293525.10| Zebrafish DNA sequence from clone CH211-142B9 in linkage group 12, complete sequence Length = 155553 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 catctcatctcatcatatcatcat 109 |||||||||| ||||||||||||| Sbjct: 146358 catctcatcttatcatatcatcat 146335
>gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, complete sequence Length = 124497 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 catcatatcatcatcttccc 115 |||||||||||||||||||| Sbjct: 100936 catcatatcatcatcttccc 100955
>emb|CR627258.1| Homo sapiens mRNA; cDNA DKFZp686P238 (from clone DKFZp686P238) Length = 6579 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 aaggtcaggcagagcaggga 241 |||||||||||||||||||| Sbjct: 2487 aaggtcaggcagagcaggga 2468
>dbj|AK093304.1| Homo sapiens cDNA FLJ35985 fis, clone TESTI2014248 Length = 3015 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 gcagagcagggagccaggga 249 |||||||||||||||||||| Sbjct: 2328 gcagagcagggagccaggga 2309
>ref|XM_945988.1| PREDICTED: Homo sapiens hypothetical protein LOC285847, transcript variant 3 (LOC285847), mRNA Length = 3004 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 gcagagcagggagccaggga 249 |||||||||||||||||||| Sbjct: 2322 gcagagcagggagccaggga 2303
>ref|XM_934928.1| PREDICTED: Homo sapiens hypothetical protein LOC285847, transcript variant 1 (LOC285847), mRNA Length = 3004 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 gcagagcagggagccaggga 249 |||||||||||||||||||| Sbjct: 2322 gcagagcagggagccaggga 2303
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatat 103 |||||||||||||||||||| Sbjct: 320935 ctcatctcatctcatcatat 320916
>gb|AC009286.32| Homo sapiens chromosome 22 clone 322f3 map 22, complete sequence Length = 121871 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agggagccagggagagaggg 256 |||||||||||||||||||| Sbjct: 90815 agggagccagggagagaggg 90834
>emb|AJ303140.1|HSA303140 Homo sapiens NOD2 gene for LRR-containing protein, exons 1-11 Length = 163319 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 84014 ctcatctcatctcatcatctcatc 84037
>gb|AC007728.4|AC007728 Homo sapiens chromosome 16 clone RP11-327F22, complete sequence Length = 168271 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 165927 ctcatctcatctcatcatctcatc 165904
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atcatcatcttccccatcta 121 |||||||||||||||||||| Sbjct: 9504871 atcatcatcttccccatcta 9504852
>gb|AC133548.2| Homo sapiens chromosome 16 clone RP11-17M15, complete sequence Length = 106288 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 44916 ctcatctcatctcatcatttcatc 44893
>gb|AC007608.7| Homo sapiens chromosome 16 clone RP11-401P9, complete sequence Length = 169773 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 26636 ctcatctcatctcatcatctcatc 26613
>gb|AC113612.3| Homo sapiens BAC clone RP11-433C18 from 2, complete sequence Length = 56549 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 31275 ctcatctcatctcatcatttcatc 31252 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 catctcatctcatcatatcatcat 109 |||||||||||||||| ||||||| Sbjct: 30553 catctcatctcatcatttcatcat 30530
>gb|AC060812.15| Homo sapiens chromosome 11, clone RP11-120E20, complete sequence Length = 184106 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 117175 ctcatctcatctcatcatctcatc 117152 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 117132 ctcatctcatctcatcatctcatc 117109 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcatct 111 |||||||||||||||| |||||||||| Sbjct: 117071 ctcatctcatctcatctcatcatcatct 117044
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 40.1 bits (20), Expect = 4.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatcatct 111 |||||||||||||||||| | ||||||| Sbjct: 117986 ctcatctcatctcatcatcttatcatct 117959
>ref|XM_342003.2| PREDICTED: Rattus norvegicus RAS guanyl releasing protein 2 (calcium and DAG-regulated) (predicted) (Rasgrp2_predicted), mRNA Length = 2218 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gcagagcagggagccaggga 249 |||||||||||||||||||| Sbjct: 2044 gcagagcagggagccaggga 2063
>gb|AC134504.2| Homo sapiens 3 BAC RP11-316F12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 87167 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 aaggtcaggcagagcaggga 241 |||||||||||||||||||| Sbjct: 75526 aaggtcaggcagagcaggga 75507
>gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, complete sequence Length = 228068 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 gcagagcagggagccagggagaga 253 |||| ||||||||||||||||||| Sbjct: 104524 gcagggcagggagccagggagaga 104501
>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0692F07 Length = 141544 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atcatcatcttccccatcta 121 |||||||||||||||||||| Sbjct: 68507 atcatcatcttccccatcta 68488
>dbj|AK024586.1| Homo sapiens cDNA: FLJ20933 fis, clone ADSE01388 Length = 1567 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 atctcatctcatcatatcat 106 |||||||||||||||||||| Sbjct: 1238 atctcatctcatcatatcat 1257
>gb|U78171.1|MMU78171 Mus musculus calcium- and diacylglycerol-regulated guanine nucleotide exchange factor I (CalDAG-GEFI) mRNA, complete cds Length = 2250 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gcagagcagggagccaggga 249 |||||||||||||||||||| Sbjct: 2043 gcagagcagggagccaggga 2062
>gb|AC087416.18| Mus musculus strain C57BL/6J chromosome 2 clone rp23-224l16, complete sequence Length = 183349 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 8433 ctcatctcatctcatcatctcatc 8410
>gb|AF081193.1|AF081193 Mus musculus calcium and DAG-regulated guanine nucleotide exchange factor I mRNA, complete cds Length = 2250 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gcagagcagggagccaggga 249 |||||||||||||||||||| Sbjct: 2043 gcagagcagggagccaggga 2062
>emb|AL832203.1|HSM803510 Homo sapiens mRNA; cDNA DKFZp686H142 (from clone DKFZp686H142) Length = 6613 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 aaggtcaggcagagcaggga 241 |||||||||||||||||||| Sbjct: 2519 aaggtcaggcagagcaggga 2500
>gb|AC140198.4| Mus musculus BAC clone RP23-255C4 from 16, complete sequence Length = 198007 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 catatcatcatcttccccatctat 122 |||| ||||||||||||||||||| Sbjct: 176726 catagcatcatcttccccatctat 176703
>emb|AL805918.5| Mouse DNA sequence from clone RP23-191L7 on chromosome 2, complete sequence Length = 213625 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 48110 ctcatctcatctcatcatctcatc 48087
>dbj|AP001214.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:cos138 Length = 41157 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 ctcatctcatctcatcatatcatc 107 |||||||||||||||||| ||||| Sbjct: 24113 ctcatctcatctcatcatttcatc 24090 Score = 40.1 bits (20), Expect = 4.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 catctcatctcatcatatcatcat 109 |||||||||||||||| ||||||| Sbjct: 23391 catctcatctcatcatttcatcat 23368
>dbj|D87009.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:288A10 Length = 104386 Score = 40.1 bits (20), Expect = 4.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agggagccagggagagaggg 256 |||||||||||||||||||| Sbjct: 36280 agggagccagggagagaggg 36299 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,541,091 Number of Sequences: 3902068 Number of extensions: 3541091 Number of successful extensions: 316858 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 313061 Number of HSP's gapped (non-prelim): 3795 length of query: 358 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 336 effective length of database: 17,147,199,772 effective search space: 5761459123392 effective search space used: 5761459123392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
