| Clone Name | bast22a06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR) Length = 1490 Score = 862 bits (435), Expect = 0.0 Identities = 438/439 (99%) Strand = Plus / Plus Query: 4 tggctctccagcttctcccctccaccctctccgtccccaagaagggcagcagcatgggcg 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95 tggctctccagcttctcccctccaccctctccgtccccaagaagggcagcagcatgggcg 154 Query: 64 cagtggcggtgaaggacacggcggcgttcctgggcgtgagcagcaaggcgaagaaggcgt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155 cagtggcggtgaaggacacggcggcgttcctgggcgtgagcagcaaggcgaagaaggcgt 214 Query: 124 cgctggcggtgaggacgcaggtggccacggcgccttcgccggtgacgacgagcccgggct 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 cgctggcggtgaggacgcaggtggccacggcgccttcgccggtgacgacgagcccgggct 274 Query: 184 cgaccgcgtcgtcgccgagcggcaagaagacgctgcggcagggcgtggtggtgatcacgg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cgaccgcgtcgtcgccgagcggcaagaagacgctgcggcagggcgtggtggtgatcacgg 334 Query: 244 gcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggcaagtggc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 gcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggcaagtggc 394 Query: 304 acgtcgtcatggcgtgccgcgacttcctcaaggccttcaaggcggccaaggcggcgggca 363 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 395 acgtcgtcatggcgtgccgcgacttcctcaaggcctccaaggcggccaaggcggcgggca 454 Query: 364 tggcggacggcagctacaccgtcatgcacctcgacctcgcctccctcgacagcgtccggc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 tggcggacggcagctacaccgtcatgcacctcgacctcgcctccctcgacagcgtccggc 514 Query: 424 agttcgttgacgcgttccg 442 ||||||||||||||||||| Sbjct: 515 agttcgttgacgcgttccg 533
>emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlorophyilide reductase Length = 1484 Score = 680 bits (343), Expect = 0.0 Identities = 415/439 (94%) Strand = Plus / Plus Query: 4 tggctctccagcttctcccctccaccctctccgtccccaagaagggcagcagcatgggcg 63 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 74 tggctctccagctcctcccctccaccctctccgtccccaagaagggtagcagcatgggcg 133 Query: 64 cagtggcggtgaaggacacggcggcgttcctgggcgtgagcagcaaggcgaagaaggcgt 123 | | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 cggcggcagtgaaggacacggcggcgttcctgggcgtgagcagcaaggcgaagaaggcgt 193 Query: 124 cgctggcggtgaggacgcaggtggccacggcgccttcgccggtgacgacgagcccgggct 183 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 194 cgctagcggtgaggacgcaggtggccacggcgccttcgtcggtgacgacgagcccgggct 253 Query: 184 cgaccgcgtcgtcgccgagcggcaagaagacgctgcggcagggcgtggtggtgatcacgg 243 || | || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 cggcgacggcgaagccgagcggcaagaagacgctgcggcagggcgtggtggtgatcacgg 313 Query: 244 gcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggcaagtggc 303 ||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 314 gcgcgtcgtccgggctgggtctggcggcggccaaggcgctggcagagacgggcaagtggc 373 Query: 304 acgtcgtcatggcgtgccgcgacttcctcaaggccttcaaggcggccaaggcggcgggca 363 |||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |||| Sbjct: 374 acgtggtcatggcgtgccgcgacttcctcaaggcatccaaggcggccaaggcggcaggca 433 Query: 364 tggcggacggcagctacaccgtcatgcacctcgacctcgcctccctcgacagcgtccggc 423 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 434 tggcagacggcagctacaccgtcatgcacctcgacctcgcctcgctcgacagcgtccggc 493 Query: 424 agttcgttgacgcgttccg 442 ||||||| || |||||||| Sbjct: 494 agttcgtggatgcgttccg 512
>emb|X17067.1|ASPCR Avena sativa mRNA for protochlorophyllide reductase Length = 1146 Score = 303 bits (153), Expect = 3e-79 Identities = 201/217 (92%) Strand = Plus / Plus Query: 226 gcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggccaaggcgctgg 285 ||||||||||||||||||||||||| || || || ||||| ||||||||||||||||||| Sbjct: 1 gcgtggtggtgatcacgggcgcgtcgtcgggcctcggcctcgcggcggccaaggcgctgg 60 Query: 286 ccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggccttcaagg 345 | |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| Sbjct: 61 cggagacgggcaagtggcacgtggtcatggcgtgccgcgacttcctcaaggcgtccaagg 120 Query: 346 cggccaaggcggcgggcatggcggacggcagctacaccgtcatgcacctcgacctcgcct 405 | |||||||||||||||||||||||||| |||||||| || |||||||| |||||||||| Sbjct: 121 ccgccaaggcggcgggcatggcggacgggagctacacggtgatgcacctggacctcgcct 180 Query: 406 ccctcgacagcgtccggcagttcgttgacgcgttccg 442 ||||||||||||||||||||||||| ||||| ||||| Sbjct: 181 ccctcgacagcgtccggcagttcgtggacgccttccg 217
>ref|XM_474360.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1164 Score = 246 bits (124), Expect = 5e-62 Identities = 199/224 (88%) Strand = Plus / Plus Query: 207 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 266 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 202 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 261 Query: 267 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 326 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 262 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 321 Query: 327 ttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 386 ||||| ||||| | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 322 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 381 Query: 387 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 382 atgcacctggacctcgcctccctcgacagcgtccgccagttcgt 425
>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01, complete sequence Length = 133331 Score = 246 bits (124), Expect = 5e-62 Identities = 199/224 (88%) Strand = Plus / Plus Query: 207 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 266 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 4144 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 4203 Query: 267 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 326 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 4204 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 4263 Query: 327 ttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 386 ||||| ||||| | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 4264 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 4323 Query: 387 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 4324 atgcacctggacctcgcctccctcgacagcgtccgccagttcgt 4367
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 246 bits (124), Expect = 5e-62 Identities = 199/224 (88%) Strand = Plus / Plus Query: 207 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 266 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 34698582 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 34698641 Query: 267 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 326 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 34698642 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 34698701 Query: 327 ttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 386 ||||| ||||| | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 34698702 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 34698761 Query: 387 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 34698762 atgcacctggacctcgcctccctcgacagcgtccgccagttcgt 34698805
>dbj|AK104855.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B11, full insert sequence Length = 1384 Score = 246 bits (124), Expect = 5e-62 Identities = 199/224 (88%) Strand = Plus / Plus Query: 207 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 266 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333 Query: 267 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 326 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 334 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 393 Query: 327 ttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 386 ||||| ||||| | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 394 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 453 Query: 387 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 454 atgcacctggacctcgcctccctcgacagcgtccgccagttcgt 497
>dbj|AK103940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G08, full insert sequence Length = 1384 Score = 246 bits (124), Expect = 5e-62 Identities = 199/224 (88%) Strand = Plus / Plus Query: 207 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 266 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333 Query: 267 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 326 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 334 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 393 Query: 327 ttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 386 ||||| ||||| | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 394 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 453 Query: 387 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 454 atgcacctggacctcgcctccctcgacagcgtccgccagttcgt 497
>dbj|AK065236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H23, full insert sequence Length = 1385 Score = 246 bits (124), Expect = 5e-62 Identities = 199/224 (88%) Strand = Plus / Plus Query: 207 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 266 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 275 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 334 Query: 267 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 326 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 335 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 394 Query: 327 ttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 386 ||||| ||||| | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 395 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 454 Query: 387 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 455 atgcacctggacctcgcctccctcgacagcgtccgccagttcgt 498
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 246 bits (124), Expect = 5e-62 Identities = 199/224 (88%) Strand = Plus / Plus Query: 207 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 266 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 96506 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 96565 Query: 267 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 326 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 96566 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 96625 Query: 327 ttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 386 ||||| ||||| | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 96626 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 96685 Query: 387 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 96686 atgcacctggacctcgcctccctcgacagcgtccgccagttcgt 96729
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 246 bits (124), Expect = 5e-62 Identities = 199/224 (88%) Strand = Plus / Plus Query: 207 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 266 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 41602 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 41661 Query: 267 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 326 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 41662 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 41721 Query: 327 ttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 386 ||||| ||||| | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 41722 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 41781 Query: 387 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 41782 atgcacctggacctcgcctccctcgacagcgtccgccagttcgt 41825
>dbj|AK103943.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G12, full insert sequence Length = 1384 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 207 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 266 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333 Query: 267 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 326 |||||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||| Sbjct: 334 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtggtggcgtgccgcgac 393 Query: 327 ttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 386 ||||| ||||| | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 394 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 453 Query: 387 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 454 atgcacctggacctcgcctccctcgacagcgtccgccagttcgt 497
>ref|NM_197169.1| Oryza sativa (japonica cultivar-group) putative dehydrogenase (OSJNBa0017E08.8), mRNA Length = 1564 Score = 172 bits (87), Expect = 6e-40 Identities = 192/227 (84%) Strand = Plus / Plus Query: 204 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 263 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 306 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 365 Query: 264 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 323 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 366 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 425 Query: 324 gacttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacacc 383 |||||||||||||| | || |||||||| || ||||||| | | |||||||||||| Sbjct: 426 gacttcctcaaggcgtcgcgcgccgccaaggccgccggcatggagaagggcagctacacc 485 Query: 384 gtcatgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 || | ||||||||||| || || |||||||||||| |||||||||| Sbjct: 486 atcgtccacctcgacctggcgtcgctcgacagcgtcaggcagttcgt 532
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 172 bits (87), Expect = 6e-40 Identities = 192/227 (84%) Strand = Plus / Minus Query: 204 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 263 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 120731 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 120672 Query: 264 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 323 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 120671 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 120612 Query: 324 gacttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacacc 383 |||||||||||||| | || |||||||| || ||||||| | | |||||||||||| Sbjct: 120611 gacttcctcaaggcgtcgcgcgccgccaaggccgccggcatggagaagggcagctacacc 120552 Query: 384 gtcatgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 || | ||||||||||| || || |||||||||||| |||||||||| Sbjct: 120551 atcgtccacctcgacctggcgtcgctcgacagcgtcaggcagttcgt 120505
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 172 bits (87), Expect = 6e-40 Identities = 192/227 (84%) Strand = Plus / Plus Query: 204 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 263 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 18385962 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 18386021 Query: 264 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 323 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 18386022 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 18386081 Query: 324 gacttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacacc 383 |||||||||||||| | || |||||||| || ||||||| | | |||||||||||| Sbjct: 18386082 gacttcctcaaggcgtcgcgcgccgccaaggccgccggcatggagaagggcagctacacc 18386141 Query: 384 gtcatgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 || | ||||||||||| || || |||||||||||| |||||||||| Sbjct: 18386142 atcgtccacctcgacctggcgtcgctcgacagcgtcaggcagttcgt 18386188
>dbj|AK068143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134C06, full insert sequence Length = 2944 Score = 172 bits (87), Expect = 6e-40 Identities = 192/227 (84%) Strand = Plus / Plus Query: 204 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 263 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 1506 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 1565 Query: 264 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 323 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 1566 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 1625 Query: 324 gacttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacacc 383 |||||||||||||| | || |||||||| || ||||||| | | |||||||||||| Sbjct: 1626 gacttcctcaaggcgtcgcgcgccgccaaggccgccggcatggagaagggcagctacacc 1685 Query: 384 gtcatgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 || | ||||||||||| || || |||||||||||| |||||||||| Sbjct: 1686 atcgtccacctcgacctggcgtcgctcgacagcgtcaggcagttcgt 1732
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 172 bits (87), Expect = 6e-40 Identities = 192/227 (84%) Strand = Plus / Plus Query: 204 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 263 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 18396015 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 18396074 Query: 264 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 323 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 18396075 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 18396134 Query: 324 gacttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacacc 383 |||||||||||||| | || |||||||| || ||||||| | | |||||||||||| Sbjct: 18396135 gacttcctcaaggcgtcgcgcgccgccaaggccgccggcatggagaagggcagctacacc 18396194 Query: 384 gtcatgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 || | ||||||||||| || || |||||||||||| |||||||||| Sbjct: 18396195 atcgtccacctcgacctggcgtcgctcgacagcgtcaggcagttcgt 18396241
>emb|AJ567760.1|ZMA567760 Zea mays partial mRNA for NADPH-protochlorophyllide oxidoreductase (por gene) Length = 1116 Score = 149 bits (75), Expect = 9e-33 Identities = 189/227 (83%) Strand = Plus / Plus Query: 204 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 263 ||||||||||| || || ||||| || ||| ||||| |||||||| ||||| || ||| Sbjct: 154 ggcaagaagaccctccgcaagggcacggcggtcatcaccggcgcgtcgtccggcctcggc 213 Query: 264 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 323 || || |||| ||||| ||||| ||||| ||||||||||||||| ||||||| |||||| Sbjct: 214 ctcgccacggcgaaggccctggcggagacaggcaagtggcacgtcatcatggcctgccgc 273 Query: 324 gacttcctcaaggccttcaaggcggccaaggcggcgggcatggcggacggcagctacacc 383 |||||||||||||| | |||||||||||||| ||||||| | | ||||| |||| Sbjct: 274 gacttcctcaaggcgtcgcgcgcggccaaggcggccggcatggacaaggacagcttcacc 333 Query: 384 gtcatgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 430 ||| ||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 334 gtcgtgcacctggacctcgcctccctggacagcgtccgccagttcgt 380
>gb|AY103784.1| Zea mays PCO066646 mRNA sequence Length = 1664 Score = 135 bits (68), Expect = 1e-28 Identities = 158/188 (84%) Strand = Plus / Plus Query: 243 ggcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggcaagtgg 302 |||||||| ||||| || |||||||| |||| ||||| ||||| ||||| ||||||||| Sbjct: 375 ggcgcgtcgtccggcctcggcctggccacggcgaaggccctggcggagaccggcaagtgg 434 Query: 303 cacgtcgtcatggcgtgccgcgacttcctcaaggccttcaaggcggccaaggcggcgggc 362 |||||| ||||||| |||||||| || |||||||| | |||||||| ||||| ||| Sbjct: 435 cacgtcatcatggcctgccgcgattttctcaaggcgtcgcgcgcggccaaagcggccggc 494 Query: 363 atggcggacggcagctacaccgtcatgcacctcgacctcgcctccctcgacagcgtccgg 422 |||| | | ||||| ||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 495 atggacaaggacagcttcaccgtcgtgcacctggacctcgcctccctcgacagcgtccgc 554 Query: 423 cagttcgt 430 |||||||| Sbjct: 555 cagttcgt 562
>emb|X84738.1|HVNADPHPO H.vulgare mRNA for NADPH-protochlorophyllide oxidoreductase Length = 1345 Score = 131 bits (66), Expect = 2e-27 Identities = 162/194 (83%) Strand = Plus / Plus Query: 237 atcacgggcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggc 296 |||||||||||||| || || || ||||| || |||||||||| ||||| ||| | ||| Sbjct: 313 atcacgggcgcgtcgtcgggcctcggcctcgccacggccaaggccctggcggagtcaggc 372 Query: 297 aagtggcacgtcgtcatggcgtgccgcgacttcctcaaggccttcaaggcggccaaggcg 356 |||||||||||| |||||||||||||||||| ||||||| || ||||||| |||| Sbjct: 373 aagtggcacgtcatcatggcgtgccgcgactacctcaagaccgcgcgcgcggccagggcg 432 Query: 357 gcgggcatggcggacggcagctacaccgtcatgcacctcgacctcgcctccctcgacagc 416 || |||||| | | |||||||||||| || ||||||| || || ||||||||||||||| Sbjct: 433 gccggcatgcccaagggcagctacaccatcgtgcaccttgatctggcctccctcgacagc 492 Query: 417 gtccggcagttcgt 430 ||||| |||||||| Sbjct: 493 gtccgccagttcgt 506
>gb|AY862405.1| Musa acuminata NADPH-protochlorophyllide oxidoreductase gene, complete cds Length = 1619 Score = 103 bits (52), Expect = 5e-19 Identities = 175/216 (81%) Strand = Plus / Plus Query: 215 gctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggc 274 ||||||| ||||||||||||| ||||| ||||| || || || || ||||| || || || Sbjct: 423 gctgcggaagggcgtggtggtaatcaccggcgcctcctcgggactcggcctcgccgctgc 482 Query: 275 caaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaa 334 |||||| || |||||||| | || |||||||| |||||||| ||| | ||||||||||| Sbjct: 483 caaggctctcgccgagaccgagaaatggcacgttgtcatggcctgcagggacttcctcaa 542 Query: 335 ggccttcaaggcggccaaggcggcgggcatggcggacggcagctacaccgtcatgcacct 394 |||| ||||| || || |||| |||||||| | | | |||| || |||||||||| Sbjct: 543 ggccgagaaggccgcgcagtcggccggcatggccaaggagaactactccatcatgcacct 602 Query: 395 cgacctcgcctccctcgacagcgtccggcagttcgt 430 |||||||| || ||||||||||| ||||||||||| Sbjct: 603 ggacctcgcatcgctcgacagcgtgcggcagttcgt 638
>gb|AY106314.1| Zea mays PCO151862 mRNA sequence Length = 1009 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 374 cagctacaccgtcatgcacctcgacctcgcctccctcgacagcgtccggca 424 |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 22 cagctacaccatcatgcacctggacctggcctccctcgacagcgtgcggca 72
>gb|U36752.1|CRU36752 Chlamydomonas reinhardtii NADPH:protochlorophyllide oxidoreductase (lpcr-1) gene, nuclear gene encoding chloroplast protein, complete cds Length = 4101 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 273 gccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctc 332 |||||||| ||||||| || ||| |||||||||| |||||||| ||||| ||||||||| Sbjct: 1511 gccaaggccctggccgccaccggcgagtggcacgtggtcatggcctgccgtgacttcctc 1570 Query: 333 aaggcc 338 |||||| Sbjct: 1571 aaggcc 1576
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 265 tggcggcggccaaggcgctggccg 288 |||||||||||||||||||||||| Sbjct: 5142952 tggcggcggccaaggcgctggccg 5142975
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 347 ggccaaggcggcgggcatggcgg 369 ||||||||||||||||||||||| Sbjct: 3189668 ggccaaggcggcgggcatggcgg 3189646 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 ggcggccaaggcggcgggcat 364 ||||||||||||||||||||| Sbjct: 3239309 ggcggccaaggcggcgggcat 3239329 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ggcggccaaggcggcgggcatggc 367 ||||||||||||||||||| |||| Sbjct: 4342958 ggcggccaaggcggcgggcgtggc 4342935
>gb|AF223646.1| Uncultured bacterium plasmid pAH115 esterase gene, complete cds Length = 2142 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 180 ggctcgaccgcgtcgtcgccga 201 |||||||||||||||||||||| Sbjct: 140 ggctcgaccgcgtcgtcgccga 119
>gb|AF162207.1|AF162207 Lactuca sativa NADPH-protochlorophyllide oxidoreductase mRNA, partial sequence; nuclear gene for chloroplast product Length = 926 Score = 44.1 bits (22), Expect = 0.38 Identities = 37/42 (88%) Strand = Plus / Plus Query: 377 ctacaccgtcatgcacctcgacctcgcctccctcgacagcgt 418 ||||||||| |||||||||||||| | |||||||| ||||| Sbjct: 538 ctacaccgttatgcacctcgacctttcttccctcgaaagcgt 579
>ref|NM_124799.2| Arabidopsis thaliana PORA; oxidoreductase/ protochlorophyllide reductase AT5G54190 (PORA) transcript variant AT5G54190.1 mRNA, complete cds Length = 1430 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 285 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 337 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 375 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 427
>ref|NM_001036995.1| Arabidopsis thaliana PORA; oxidoreductase/ protochlorophyllide reductase AT5G54190 (PORA) transcript variant AT5G54190.2 mRNA, complete cds Length = 1610 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 285 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 337 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 458 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 510
>ref|XM_957279.1| Neurospora crassa OR74A hypothetical protein (NCU06338.1) partial mRNA Length = 5772 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 ggcgtgagcagcaaggcgaagaagg 120 ||||||||||||||||| ||||||| Sbjct: 5698 ggcgtgagcagcaaggcaaagaagg 5722
>ref|XM_326192.1| Neurospora crassa OR74A hypothetical protein (NCU06338.1) partial mRNA Length = 5772 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 96 ggcgtgagcagcaaggcgaagaagg 120 ||||||||||||||||| ||||||| Sbjct: 5698 ggcgtgagcagcaaggcaaagaagg 5722
>gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosome 1, complete sequence Length = 164612 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 cttctcccctccaccctctcc 35 ||||||||||||||||||||| Sbjct: 42019 cttctcccctccaccctctcc 41999
>gb|AE005920.1| Caulobacter crescentus CB15 section 246 of 359 of the complete genome Length = 10062 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 260 gggcctggcggcggccaaggcgctg 284 |||||||||||||| |||||||||| Sbjct: 7333 gggcctggcggcggtcaaggcgctg 7309
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 265 tggcggcggccaaggcgctggccga 289 ||||||| ||||||||||||||||| Sbjct: 4597581 tggcggcagccaaggcgctggccga 4597605 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 caaggccttcaaggcggccaaggc 355 |||||||||||| ||||||||||| Sbjct: 3513191 caaggccttcaacgcggccaaggc 3513168
>emb|BX831431.1|CNS0A0QN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS8ZF04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1364 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 285 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 337 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 345 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 397
>emb|BX830661.1|CNS09YSL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS12ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1327 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 285 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 337 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 325 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 377
>gb|BT005080.1| Arabidopsis thaliana clone U20856 putative NADPH:protochlorophyllide oxidoreductase A (At5g54190) mRNA, complete cds Length = 1249 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 285 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 337 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 337 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 389
>gb|BT003853.1| Arabidopsis thaliana clone RAFL16-02-F18 (R20856) putative NADPH:protochlorophyllide oxidoreductase A (At5g54190) mRNA, complete cds Length = 1446 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 285 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 337 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 375 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 427
>gb|AE005001.1| Halobacterium sp. NRC-1 section 32 of 170 of the complete genome Length = 10670 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 gcacgtcgtcatggcgtgccg 322 ||||||||||||||||||||| Sbjct: 6496 gcacgtcgtcatggcgtgccg 6476
>dbj|AB013387.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18G13 Length = 31309 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 285 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 337 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 26336 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 26284
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 ggccaaggcgctggccgagac 292 ||||||||||||||||||||| Sbjct: 3414909 ggccaaggcgctggccgagac 3414929
>gb|AY260760.3| Streptomyces hygroscopicus subsp. yingchengensis Shy1 (shy1), CvhE (cvhE), CvhD (cvhD), CvhC (cvhC), CvhB (cvhB), CvhA (cvhA), Shy26 (shy26), Shy4 (shy4), Shy5 (shy5), Shy6 (shy6), Shy7 (shy7), Shy8 (shy8), Shy9 (shy9), Shy10 (shy10), Shy11 (shy11), Shy12 (shy12), Shy13 (shy13), Shy14 (shy14), Shy15 (shy15), Shy16 (shy16), Shy17 (shy17), Shy18 (shy18), Hmr19 (hmr19), Shy20 (shy20), Shy21 (shy21), Shy22 (shy22), Shy23 (shy23), Shy24 (shy24), and Shy25 (shy25) genes, complete cds Length = 36687 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 gctgggcctggcggcggccaa 277 ||||||||||||||||||||| Sbjct: 2550 gctgggcctggcggcggccaa 2530
>gb|U29699.1|ATU29699 Arabidopsis thaliana light-dependent NADPH:protochlorophyllide oxidoreductase A (PorA) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1218 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 285 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 337 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 337 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 389
>dbj|AB050124.1| Amaranthus tricolor POR2 mRNA for NADPH-protochlorophyllide oxidoreductase 2, partial cds Length = 674 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 375 agctacaccgtcatgcacctcgacctcgcctcc 407 ||||||||||||||||| || ||||| |||||| Sbjct: 79 agctacaccgtcatgcatcttgaccttgcctcc 111
>ref|XM_479797.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2387 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 102 agcagcaaggcgaagaaggcgtcgctgg 129 |||||||||||||| |||||| |||||| Sbjct: 1676 agcagcaaggcgaacaaggcggcgctgg 1703
>gb|DQ213273.1| Taeniopygia guttata clone 0061P0015F05 HSPC023 protein-like mRNA, complete sequence Length = 422 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 caaggcggccaaggcggcgg 360 |||||||||||||||||||| Sbjct: 67 caaggcggccaaggcggcgg 86
>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0036C12, complete sequence Length = 145517 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 tggcggcggccaaggcgctggccg 288 ||||||||||||||||| |||||| Sbjct: 62502 tggcggcggccaaggcggtggccg 62525
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ctcgaccgcgtcgtcgccga 201 |||||||||||||||||||| Sbjct: 50427 ctcgaccgcgtcgtcgccga 50446
>gb|AC162446.2| Mus musculus chromosome 8, clone RP23-410L16, complete sequence Length = 197906 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 gctgcggcagggcgtggtgg 234 |||||||||||||||||||| Sbjct: 132507 gctgcggcagggcgtggtgg 132526
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcggccaaggcgctggccga 289 |||||||||||||||||||| Sbjct: 2105778 gcggccaaggcgctggccga 2105797
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 cgcctccctcgacagcgtcc 420 |||||||||||||||||||| Sbjct: 647435 cgcctccctcgacagcgtcc 647454
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 aaggcgaagaaggcgtcgctggcg 131 |||| ||||||||||||||||||| Sbjct: 3274483 aaggggaagaaggcgtcgctggcg 3274506 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 ggacggcagctacaccgtca 387 |||||||||||||||||||| Sbjct: 1387699 ggacggcagctacaccgtca 1387718
>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence Length = 211910 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 ctctccagcttctcccctcc 26 |||||||||||||||||||| Sbjct: 118208 ctctccagcttctcccctcc 118189
>gb|AE009252.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 22 of 187 of the complete sequence Length = 14499 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 341 caaggcggccaaggcggcgggcat 364 ||||||||||| |||||||||||| Sbjct: 13654 caaggcggccagggcggcgggcat 13631
>gb|AE008361.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 165 of 187 of the complete sequence Length = 12142 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 caaggcggccaaggcggcgggcat 364 ||||||||||| |||||||||||| Sbjct: 932 caaggcggccagggcggcgggcat 955
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 tggcacgtcgtcatggcgtgccgc 323 ||||||||||||||||| |||||| Sbjct: 373356 tggcacgtcgtcatggcttgccgc 373379
>ref|XM_982866.1| PREDICTED: Mus musculus microtubule associated serine/threonine kinase 3, transcript variant 2 (Mast3), mRNA Length = 4425 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gctgcggcagggcgtggtgg 234 |||||||||||||||||||| Sbjct: 3427 gctgcggcagggcgtggtgg 3408
>ref|XM_888290.2| PREDICTED: Mus musculus microtubule associated serine/threonine kinase 3, transcript variant 2 (Mast3), mRNA Length = 4425 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gctgcggcagggcgtggtgg 234 |||||||||||||||||||| Sbjct: 3427 gctgcggcagggcgtggtgg 3408
>ref|XM_979773.1| PREDICTED: Mus musculus microtubule associated serine/threonine kinase 3 (Mast3), mRNA Length = 4425 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gctgcggcagggcgtggtgg 234 |||||||||||||||||||| Sbjct: 3427 gctgcggcagggcgtggtgg 3408
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 gcagggcgtggtggtgatca 240 |||||||||||||||||||| Sbjct: 4141015 gcagggcgtggtggtgatca 4141034
>ref|XM_749937.1| Aspergillus fumigatus Af293 nicotinate-nucleotide pyrophosphorylase (Afu3g05730) partial mRNA Length = 942 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 aggcggccaaggcggcgggc 362 |||||||||||||||||||| Sbjct: 620 aggcggccaaggcggcgggc 639
>gb|AC126798.3| Mus musculus BAC clone RP24-229N7 from chromosome 1, complete sequence Length = 172452 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccccaagaagggcagcagca 57 |||||||||||||||||||| Sbjct: 124088 ccccaagaagggcagcagca 124069
>emb|CR666827.2|CNS0FDHT Tetraodon nigroviridis full-length cDNA Length = 555 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ggtgaaggacacggcggcgt 90 |||||||||||||||||||| Sbjct: 224 ggtgaaggacacggcggcgt 205
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ggctgggcctggcggcggcc 275 |||||||||||||||||||| Sbjct: 1077017 ggctgggcctggcggcggcc 1077036
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ggcggcggccaaggcgctgg 285 |||||||||||||||||||| Sbjct: 1942139 ggcggcggccaaggcgctgg 1942158
>emb|X99258.1|MTMOB M.tuberculosis genomic sequence containing 4 ORF's Length = 4082 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcggccaaggcgctggccga 289 |||||||||||||||||||| Sbjct: 3778 gcggccaaggcgctggccga 3797
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcggccaaggcgctggccga 289 |||||||||||||||||||| Sbjct: 29855 gcggccaaggcgctggccga 29874
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 aggcggcgggcatggcggac 371 |||||||||||||||||||| Sbjct: 311086 aggcggcgggcatggcggac 311105
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 aggcggcgggcatggcggac 371 |||||||||||||||||||| Sbjct: 74877 aggcggcgggcatggcggac 74896
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14 Length = 291050 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcggccaaggcgctggccga 289 |||||||||||||||||||| Sbjct: 184766 gcggccaaggcgctggccga 184785
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 264 ctggcggcggccaaggcgctggcc 287 |||||||||||| ||||||||||| Sbjct: 40231 ctggcggcggccgaggcgctggcc 40254
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gctgggcctggcggcggcca 276 |||||||||||||||||||| Sbjct: 107449 gctgggcctggcggcggcca 107468
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 caaggcgctggccgagacgggcaa 298 |||||||||||||||||| ||||| Sbjct: 171756 caaggcgctggccgagaccggcaa 171779
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gcagggcgtggtggtgatca 240 |||||||||||||||||||| Sbjct: 1108145 gcagggcgtggtggtgatca 1108126
>gb|AE011995.1| Xanthomonas axonopodis pv. citri str. 306, section 373 of 469 of the complete genome Length = 11692 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 gcagggcgtggtggtgatca 240 |||||||||||||||||||| Sbjct: 3837 gcagggcgtggtggtgatca 3856
>gb|AE012533.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 441 of 460 of the complete genome Length = 6066 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcggcggccaaggcgctggc 286 |||||||||||||||||||| Sbjct: 5752 gcggcggccaaggcgctggc 5771
>gb|AE012453.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 361 of 460 of the complete genome Length = 10452 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 gcagggcgtggtggtgatca 240 |||||||||||||||||||| Sbjct: 3550 gcagggcgtggtggtgatca 3569
>dbj|AK140821.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130034L06 product:weakly similar to Sast-pending protein [Mus musculus], full insert sequence Length = 4263 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gctgcggcagggcgtggtgg 234 |||||||||||||||||||| Sbjct: 3507 gctgcggcagggcgtggtgg 3488
>gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, complete sequence Length = 104285 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ccagcttctcccctccaccc 30 |||||||||||||||||||| Sbjct: 51908 ccagcttctcccctccaccc 51927
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 gcaaggcgaagaaggcgtcg 125 |||||||||||||||||||| Sbjct: 1457481 gcaaggcgaagaaggcgtcg 1457500
>gb|DQ384244.1| Olyra latifolia tasselseed2-like short-chain dehydrogenase/reductase gene, partial cds Length = 759 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 146 ggccacggcgccttcgccggtgacgacg 173 ||||||| ||||||||||| |||||||| Sbjct: 565 ggccacgacgccttcgccgctgacgacg 592
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 335 ggccttcaaggcggccaaggcggc 358 |||||||||| ||||||||||||| Sbjct: 542738 ggccttcaagccggccaaggcggc 542715
>gb|L04500.1|EUBTHIORED Eubacterium acidaminophilum selenoprotein B of glycine-reductase (grdB) gene, partial cds; thioredoxin reductase (trxB), thioredoxin (trxA), selenoprotein A of glycine-reductase (grdA), glycine reductase (grdC), and glycine reductase (grdD) genes, complete cds Length = 6736 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 ttcaaggcggccaaggcggc 358 |||||||||||||||||||| Sbjct: 5569 ttcaaggcggccaaggcggc 5588
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gcggcggccaaggcgctggc 286 |||||||||||||||||||| Sbjct: 4949256 gcggcggccaaggcgctggc 4949275 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gcagggcgtggtggtgatca 240 |||||||||||||||||||| Sbjct: 978778 gcagggcgtggtggtgatca 978759
>gb|AC009077.7|AC009077 Homo sapiens chromosome 16 clone RP11-331B16, complete sequence Length = 185167 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 cttcctcaaggccttcaagg 345 |||||||||||||||||||| Sbjct: 45556 cttcctcaaggccttcaagg 45537
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 102 agcagcaaggcgaagaaggcgtcgctgg 129 |||||||||||||| |||||| |||||| Sbjct: 971854 agcagcaaggcgaacaaggcggcgctgg 971881
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 tggcggcggccaaggcgctggccg 288 ||||||||||||||||| |||||| Sbjct: 5664502 tggcggcggccaaggcggtggccg 5664479
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 tggcggcggccaaggcgctggccg 288 ||||||||||||||||| |||||| Sbjct: 16738392 tggcggcggccaaggcggtggccg 16738415 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ctcgaccgcgtcgtcgccga 201 |||||||||||||||||||| Sbjct: 16551688 ctcgaccgcgtcgtcgccga 16551707
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 cttcaaggcggccaaggcggcggg 361 |||||||||||||||||| ||||| Sbjct: 2573478 cttcaaggcggccaaggccgcggg 2573455 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgccttcgccggtgacgacg 173 |||||||||||||||||||| Sbjct: 2286225 cgccttcgccggtgacgacg 2286244
>gb|AC130462.3| Homo sapiens chromosome 16 clone CTA-67A1, complete sequence Length = 191594 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 cttcctcaaggccttcaagg 345 |||||||||||||||||||| Sbjct: 50973 cttcctcaaggccttcaagg 50992
>gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complete sequence Length = 185555 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 tctccagcttctcccctccaccct 31 ||||||||||||| |||||||||| Sbjct: 85347 tctccagcttctctcctccaccct 85370
>gb|AE004696.1| Pseudomonas aeruginosa PAO1, section 257 of 529 of the complete genome Length = 14449 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ggcgtcgctggcggtgagga 138 |||||||||||||||||||| Sbjct: 4846 ggcgtcgctggcggtgagga 4865
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 cgaccgcgtcgtcgccgagc 203 |||||||||||||||||||| Sbjct: 1012168 cgaccgcgtcgtcgccgagc 1012187
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 tggcacgtcgtcatggcgtgccgc 323 ||||||||||||||||| |||||| Sbjct: 2097905 tggcacgtcgtcatggcttgccgc 2097882
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ctcgaccgcgtcgtcgccga 201 |||||||||||||||||||| Sbjct: 2286263 ctcgaccgcgtcgtcgccga 2286282 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ctcgaccgcgtcgtcgccga 201 |||||||||||||||||||| Sbjct: 1600910 ctcgaccgcgtcgtcgccga 1600929
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 tggcggcggccaaggcgctggccg 288 ||||||||||||||||| |||||| Sbjct: 56649 tggcggcggccaaggcggtggccg 56626
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 102 agcagcaaggcgaagaaggcgtcgctgg 129 |||||||||||||| |||||| |||||| Sbjct: 134592 agcagcaaggcgaacaaggcggcgctgg 134619
>dbj|AK172971.1| Mus musculus mRNA for mKIAA0561 protein Length = 1425 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gctgcggcagggcgtggtgg 234 |||||||||||||||||||| Sbjct: 703 gctgcggcagggcgtggtgg 684
>gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the complete genome Length = 12204 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cgaccgcgtcgtcgccgagc 203 |||||||||||||||||||| Sbjct: 5711 cgaccgcgtcgtcgccgagc 5692
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_B05 Length = 144799 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 102 agcagcaaggcgaagaaggcgtcgctgg 129 |||||||||||||| |||||| |||||| Sbjct: 381 agcagcaaggcgaacaaggcggcgctgg 408
>emb|X80268.1|MY4547 M.tuberculosis 45/47 gene Length = 2061 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcggccaaggcgctggccga 289 |||||||||||||||||||| Sbjct: 1904 gcggccaaggcgctggccga 1923
>dbj|AK107409.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-E07, full insert sequence Length = 2780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 aggcggccaaggcggcgggc 362 |||||||||||||||||||| Sbjct: 1447 aggcggccaaggcggcgggc 1466
>gb|AF013569.1|AF013569 Mycobacterium bovis fibronectin attachment protein (FAP-B) gene, complete cds Length = 1123 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gcggccaaggcgctggccga 289 |||||||||||||||||||| Sbjct: 901 gcggccaaggcgctggccga 920
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gctcgaccgcgtcgtcgccgagcg 204 ||||||||| |||||||||||||| Sbjct: 1756600 gctcgaccgggtcgtcgccgagcg 1756623
>dbj|AK067392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104G24, full insert sequence Length = 2387 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 102 agcagcaaggcgaagaaggcgtcgctgg 129 |||||||||||||| |||||| |||||| Sbjct: 1676 agcagcaaggcgaacaaggcggcgctgg 1703
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 gcagggcgtggtggtgatca 240 |||||||||||||||||||| Sbjct: 1141678 gcagggcgtggtggtgatca 1141659
>gb|BC024265.1| Mus musculus microtubule associated serine/threonine kinase 3, mRNA (cDNA clone IMAGE:5137303), complete cds Length = 3042 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gctgcggcagggcgtggtgg 234 |||||||||||||||||||| Sbjct: 1139 gctgcggcagggcgtggtgg 1120
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ggcctggcggcggccaaggcgctg 284 ||||||| |||||||||||||||| Sbjct: 4462203 ggcctggtggcggccaaggcgctg 4462180
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ggcggccaaggcggcgggca 363 |||||||||||||||||||| Sbjct: 1266223 ggcggccaaggcggcgggca 1266242 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,294,182 Number of Sequences: 3902068 Number of extensions: 3294182 Number of successful extensions: 88669 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84022 Number of HSP's gapped (non-prelim): 4636 length of query: 442 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 420 effective length of database: 17,147,199,772 effective search space: 7201823904240 effective search space used: 7201823904240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)