| Clone Name | bast21h10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome | 36 | 4.2 | 2 | dbj|AK127242.1| Homo sapiens cDNA FLJ45309 fis, clone BRHIP30047... | 36 | 4.2 | 3 | gb|AC105765.3| Homo sapiens chromosome 3 clone RP11-54L6, comple... | 36 | 4.2 | 4 | dbj|AB209761.1| Homo sapiens mRNA for special AT-rich sequence b... | 36 | 4.2 |
|---|
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 gctccccatcgcaaaccc 18 |||||||||||||||||| Sbjct: 3733644 gctccccatcgcaaaccc 3733661
>dbj|AK127242.1| Homo sapiens cDNA FLJ45309 fis, clone BRHIP3004725, highly similar to DNA-binding protein SATB1 Length = 5259 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 ctccccatcgcaaacccc 19 |||||||||||||||||| Sbjct: 1376 ctccccatcgcaaacccc 1393
>gb|AC105765.3| Homo sapiens chromosome 3 clone RP11-54L6, complete sequence Length = 178790 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 ctccccatcgcaaacccc 19 |||||||||||||||||| Sbjct: 15700 ctccccatcgcaaacccc 15683
>dbj|AB209761.1| Homo sapiens mRNA for special AT-rich sequence binding protein 1 variant protein Length = 3817 Score = 36.2 bits (18), Expect = 4.2 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 ctccccatcgcaaacccc 19 |||||||||||||||||| Sbjct: 643 ctccccatcgcaaacccc 660 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 85,288 Number of Sequences: 3902068 Number of extensions: 85288 Number of successful extensions: 21147 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 21141 Number of HSP's gapped (non-prelim): 6 length of query: 39 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 19 effective length of database: 17,155,003,908 effective search space: 325945074252 effective search space used: 325945074252 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)