ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast21h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SAT_RIFPS (Q54506) Sulfate adenylyltransferase (EC 2.7.7.4) (Sul... 29 3.1
2T2MW_METWO (O59646) Type II restriction enzyme MwoI (EC 3.1.21.4... 29 3.1

>SAT_RIFPS (Q54506) Sulfate adenylyltransferase (EC 2.7.7.4) (Sulfate|
           adenylate transferase) (SAT) (ATP-sulfurylase)
          Length = 437

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 128 PTEAKTTVPVGSRPGSMIGVMACGWQSRALCK 33
           P    TTVP   RP SM       W+SR+ C+
Sbjct: 297 PAWVTTTVPSTPRPSSMTKCQRAPWRSRSSCR 328



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>T2MW_METWO (O59646) Type II restriction enzyme MwoI (EC 3.1.21.4)|
           (Endonuclease MwoI) (R.MwoI)
          Length = 363

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -2

Query: 137 LVTPTEAKTTVPVGSRPGSMIGVMACGWQSRALCKGDCRLYLVGP 3
           L  P++ K TVP+G    S  GV+ C  + + + K DC+   V P
Sbjct: 116 LENPSDFKDTVPLGINQSSYPGVLDCKIRGKNI-KADCKKIKVYP 159


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,511,943
Number of Sequences: 219361
Number of extensions: 196854
Number of successful extensions: 729
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 80,573,946
effective HSP length: 25
effective length of database: 75,089,921
effective search space used: 1802158104
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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