ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast21h02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191576.2| Oryza sativa (japonica cultivar-group), mRNA Length = 823 Score = 73.8 bits (37), Expect = 3e-10 Identities = 44/47 (93%) Strand = Plus / Plus Query: 216 gcgcggacgtgctggtacacggngcagatcangacgagctgctcgtc 262 |||||||||||||||||||||| |||||||| |||||||||| |||| Sbjct: 223 gcgcggacgtgctggtacacggtgcagatcaagacgagctgcgcgtc 269
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 73.8 bits (37), Expect = 3e-10 Identities = 44/47 (93%) Strand = Plus / Plus Query: 216 gcgcggacgtgctggtacacggngcagatcangacgagctgctcgtc 262 |||||||||||||||||||||| |||||||| |||||||||| |||| Sbjct: 3735182 gcgcggacgtgctggtacacggtgcagatcaagacgagctgcgcgtc 3735228
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 73.8 bits (37), Expect = 3e-10 Identities = 44/47 (93%) Strand = Plus / Plus Query: 216 gcgcggacgtgctggtacacggngcagatcangacgagctgctcgtc 262 |||||||||||||||||||||| |||||||| |||||||||| |||| Sbjct: 8724 gcgcggacgtgctggtacacggtgcagatcaagacgagctgcgcgtc 8770
>dbj|AK067273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098J12, full insert sequence Length = 823 Score = 73.8 bits (37), Expect = 3e-10 Identities = 44/47 (93%) Strand = Plus / Plus Query: 216 gcgcggacgtgctggtacacggngcagatcangacgagctgctcgtc 262 |||||||||||||||||||||| |||||||| |||||||||| |||| Sbjct: 223 gcgcggacgtgctggtacacggtgcagatcaagacgagctgcgcgtc 269
>gb|AC165151.2| Mus musculus BAC clone RP24-77O15 from chromosome 16, complete sequence Length = 177446 Score = 46.1 bits (23), Expect = 0.057 Identities = 29/31 (93%) Strand = Plus / Minus Query: 92 cctcctggccctgctctcctgcctcagcctc 122 |||||||| ||| |||||||||||||||||| Sbjct: 169674 cctcctggtcctcctctcctgcctcagcctc 169644
>gb|AC156020.2| Mus musculus BAC clone RP23-343A9 from chromosome 16, complete sequence Length = 215559 Score = 46.1 bits (23), Expect = 0.057 Identities = 29/31 (93%) Strand = Plus / Plus Query: 92 cctcctggccctgctctcctgcctcagcctc 122 |||||||| ||| |||||||||||||||||| Sbjct: 138661 cctcctggtcctcctctcctgcctcagcctc 138691
>gb|AC131979.10| Mus musculus chromosome 16, clone RP24-156L5, complete sequence Length = 156267 Score = 46.1 bits (23), Expect = 0.057 Identities = 29/31 (93%) Strand = Plus / Plus Query: 92 cctcctggccctgctctcctgcctcagcctc 122 |||||||| ||| |||||||||||||||||| Sbjct: 153352 cctcctggtcctcctctcctgcctcagcctc 153382
>ref|XM_612982.2| PREDICTED: Bos taurus similar to transcription factor AP-4 (activating enhancer-binding protein 4) (LOC540757), mRNA Length = 1771 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Minus Query: 79 cgccgcagctcctcctcctggccctg 104 |||||| ||||||||||||||||||| Sbjct: 1090 cgccgctgctcctcctcctggccctg 1065
>emb|CR672325.1|CNS0FHQJ Tetraodon nigroviridis full-length cDNA Length = 1029 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 ccggccgctcccacgcaccgac 164 |||||||||||||||||||||| Sbjct: 258 ccggccgctcccacgcaccgac 237
>emb|CR671114.1|CNS0FGSW Tetraodon nigroviridis full-length cDNA Length = 1030 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 ccggccgctcccacgcaccgac 164 |||||||||||||||||||||| Sbjct: 258 ccggccgctcccacgcaccgac 237
>emb|CR663330.2|CNS0FASO Tetraodon nigroviridis full-length cDNA Length = 1048 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 ccggccgctcccacgcaccgac 164 |||||||||||||||||||||| Sbjct: 263 ccggccgctcccacgcaccgac 242
>emb|CR650253.2|CNS0F0PF Tetraodon nigroviridis full-length cDNA Length = 1024 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 ccggccgctcccacgcaccgac 164 |||||||||||||||||||||| Sbjct: 242 ccggccgctcccacgcaccgac 221
>emb|CR637746.2|CNS0ER20 Tetraodon nigroviridis full-length cDNA Length = 990 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 ccggccgctcccacgcaccgac 164 |||||||||||||||||||||| Sbjct: 205 ccggccgctcccacgcaccgac 184
>emb|CR637567.2|CNS0EQX1 Tetraodon nigroviridis full-length cDNA Length = 988 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 ccggccgctcccacgcaccgac 164 |||||||||||||||||||||| Sbjct: 204 ccggccgctcccacgcaccgac 183
>emb|CR635314.2|CNS0EP6G Tetraodon nigroviridis full-length cDNA Length = 1017 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 143 ccggccgctcccacgcaccgac 164 |||||||||||||||||||||| Sbjct: 242 ccggccgctcccacgcaccgac 221
>dbj|AP002008.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-794P6, complete sequences Length = 194973 Score = 44.1 bits (22), Expect = 0.23 Identities = 25/26 (96%) Strand = Plus / Minus Query: 80 gccgcagctcctcctcctggccctgc 105 |||||| ||||||||||||||||||| Sbjct: 74049 gccgcatctcctcctcctggccctgc 74024
>dbj|AP000751.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-679A11, complete sequence Length = 176713 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 cctgctctcctgcctcagcctc 122 |||||||||||||||||||||| Sbjct: 81721 cctgctctcctgcctcagcctc 81700
>dbj|AP002340.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2011F17, complete sequence Length = 165747 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 101 cctgctctcctgcctcagcctc 122 |||||||||||||||||||||| Sbjct: 137409 cctgctctcctgcctcagcctc 137430
>gb|AY522302.1| Hepatitis C virus isolate 9c75-19 core protein gene, partial cds Length = 573 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 ||||||||||||||||||| ||||| Sbjct: 530 tcctcctggccctgctctcttgcct 554
>gb|AY522301.1| Hepatitis C virus isolate 9c75-16 core protein gene, partial cds Length = 573 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 ||||||||||||||||||| ||||| Sbjct: 530 tcctcctggccctgctctcttgcct 554
>gb|AY522294.1| Hepatitis C virus isolate 9C75-02 core protein gene, partial cds Length = 573 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 ||||||||||||||||||| ||||| Sbjct: 530 tcctcctggccctgctctcttgcct 554
>gb|AY522223.1| Hepatitis C virus isolate 3i50-12 core protein gene, partial cds Length = 573 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 ||||||||||||||||||| ||||| Sbjct: 530 tcctcctggccctgctctcttgcct 554
>gb|AY767499.1| Hepatitis C virus isolate 38166-R core E1 gene, partial sequence Length = 417 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 |||| |||||||||||||||||||| Sbjct: 15 tccttctggccctgctctcctgcct 39
>gb|AY767179.1| Hepatitis C virus isolate 31092-R core E1 gene, partial sequence Length = 409 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 |||| |||||||||||||||||||| Sbjct: 5 tccttctggccctgctctcctgcct 29
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gcgccgccgcagctcctcctc 95 ||||||||||||||||||||| Sbjct: 568035 gcgccgccgcagctcctcctc 568015
>gb|AY739360.1| Hepatitis C virus isolate ThBD-0824 core-envelope 1 protein gene, partial cds Length = 474 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 ||||||||||||||||||| ||||| Sbjct: 29 tcctcctggccctgctctcttgcct 53
>gb|AY739342.1| Hepatitis C virus isolate ThBD-0062 core-envelope 1 protein gene, partial cds Length = 474 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 |||| |||||||||||||||||||| Sbjct: 29 tccttctggccctgctctcctgcct 53
>ref|XM_868766.1| PREDICTED: Bos taurus hypothetical protein LOC616677 (LOC616677), mRNA Length = 624 Score = 42.1 bits (21), Expect = 0.90 Identities = 27/29 (93%) Strand = Plus / Plus Query: 82 cgcagctcctcctcctggccctgctctcc 110 ||||||||||||||| |||||| |||||| Sbjct: 568 cgcagctcctcctccgggccctcctctcc 596
>ref|XM_843001.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0397) partial mRNA Length = 2061 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gcgccgccgcagctcctcctc 95 ||||||||||||||||||||| Sbjct: 1233 gcgccgccgcagctcctcctc 1213
>emb|AL645965.8| Mouse DNA sequence from clone RP23-65I14 on chromosome 11 Contains the 5' end of the gene for a novel protein (330000P08Rik) (Luc7a), the gene for a novel protein (5530600A18Rik), the Abcc3 gene for ATP-binding cassette sub-family C (CFTR/MRP) member 3, the Cacna1g gene for calcium channel voltage-dependent T type alpha 1G subunit, the 3' end of the Tisp78 gene for transcript increased in spermiogenesis 78 and one CpG island, complete sequence Length = 161978 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 tcctcctcctggccctgctct 108 ||||||||||||||||||||| Sbjct: 39848 tcctcctcctggccctgctct 39868
>gb|AC011474.6| Homo sapiens chromosome 19 clone CTC-525D6, complete sequence Length = 194718 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 98 ggccctgctctcctgcctcagcctc 122 ||||||||||||| ||||||||||| Sbjct: 112387 ggccctgctctccggcctcagcctc 112411
>ref|XM_680071.1| PREDICTED: Danio rerio similar to CG8486-PA, isoform A (LOC557090), partial mRNA Length = 1735 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 gggcggaccaccggcagctct 197 ||||||||||||||||||||| Sbjct: 1096 gggcggaccaccggcagctct 1116
>gb|BC113341.1| Bos taurus cDNA clone MGC:138076 IMAGE:8085733, complete cds Length = 1688 Score = 42.1 bits (21), Expect = 0.90 Identities = 27/29 (93%) Strand = Plus / Plus Query: 82 cgcagctcctcctcctggccctgctctcc 110 ||||||||||||||| |||||| |||||| Sbjct: 1181 cgcagctcctcctccgggccctcctctcc 1209
>gb|AF345004.1|AF345004 Hepatitis C virus isolate REpreSC1c2 polyprotein gene, partial cds Length = 981 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 |||| |||||||||||||||||||| Sbjct: 2 tccttctggccctgctctcctgcct 26
>gb|AF344994.1|AF344994 Hepatitis C virus isolate RDpostSC1c16 polyprotein gene, partial cds Length = 978 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 |||||||||||||||| |||||||| Sbjct: 2 tcctcctggccctgctttcctgcct 26
>gb|AF344988.1|AF344988 Hepatitis C virus isolate RDpostSC1c3 polyprotein gene, partial cds Length = 978 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 |||||||||||||||| |||||||| Sbjct: 2 tcctcctggccctgctttcctgcct 26
>gb|AF344987.1|AF344987 Hepatitis C virus isolate RDpostSC1c2 polyprotein gene, partial cds Length = 978 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 |||||||||||||||| |||||||| Sbjct: 2 tcctcctggccctgctttcctgcct 26
>gb|AF344986.1|AF344986 Hepatitis C virus isolate RDpostSC1c1 polyprotein gene, partial cds Length = 978 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 |||||||||||||||| |||||||| Sbjct: 2 tcctcctggccctgctttcctgcct 26
>gb|AF344983.1|AF344983 Hepatitis C virus isolate RDpreSC2c10 polyprotein gene, partial cds Length = 978 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 |||||||||||||||| |||||||| Sbjct: 2 tcctcctggccctgctttcctgcct 26
>gb|AF344980.1|AF344980 Hepatitis C virus isolate RDpreSC2c5 polyprotein gene, partial cds Length = 978 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 |||||||||||||||| |||||||| Sbjct: 2 tcctcctggccctgctttcctgcct 26
>gb|AC016736.6| Homo sapiens BAC clone RP11-393J17 from 2, complete sequence Length = 149884 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 105 ctctcctgcctcagcctcgtc 125 ||||||||||||||||||||| Sbjct: 84054 ctctcctgcctcagcctcgtc 84074
>gb|AF118579.1|AF118579 Hepatitis C virus isolate FS1C11 polyprotein gene, partial cds Length = 961 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 ||||||||||||||||||| ||||| Sbjct: 3 tcctcctggccctgctctcttgcct 27
>gb|AF118578.1|AF118578 Hepatitis C virus isolate FS1C1 polyprotein gene, partial cds Length = 958 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 ||||||||||||||||||| ||||| Sbjct: 3 tcctcctggccctgctctcttgcct 27
>gb|AF118577.1|AF118577 Hepatitis C virus isolate FS1C14 polyprotein gene, partial cds Length = 961 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 ||||||||||||||||||| ||||| Sbjct: 3 tcctcctggccctgctctcttgcct 27
>gb|AF118576.1|AF118576 Hepatitis C virus isolate FS1C12 polyprotein gene, partial cds Length = 961 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 ||||||||||||||||||| ||||| Sbjct: 3 tcctcctggccctgctctcttgcct 27
>gb|U37597.1|HCU37597 Hepatitis C virus clone p2284 polyprotein mRNA, partial cds Length = 501 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 ||||||||||||||||||| ||||| Sbjct: 61 tcctcctggccctgctctcttgcct 85
>gb|U37596.1|HCU37596 Hepatitis C virus clone p2283 polyprotein mRNA, partial cds Length = 501 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 ||||||||||||||||||| ||||| Sbjct: 61 tcctcctggccctgctctcttgcct 85
>gb|U37595.1|HCU37595 Hepatitis C virus clone p2243 polyprotein mRNA, partial cds Length = 501 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 ||||||||||||||||||| ||||| Sbjct: 61 tcctcctggccctgctctcttgcct 85
>gb|U37594.1|HCU37594 Hepatitis C virus clone p2242 polyprotein mRNA, partial cds Length = 501 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcctgcct 115 ||||||||||||||||||| ||||| Sbjct: 61 tcctcctggccctgctctcttgcct 85
>emb|AL137229.4|CNS01DWK Human chromosome 14 DNA sequence BAC C-2246N19 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 125780 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 ctgctctcctgcctcagcctc 122 ||||||||||||||||||||| Sbjct: 69585 ctgctctcctgcctcagcctc 69605
>ref|NM_129352.2| Arabidopsis thaliana unknown protein AT2G37960 mRNA, complete cds Length = 1793 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ccgccgcagctcctcctcct 97 |||||||||||||||||||| Sbjct: 387 ccgccgcagctcctcctcct 406
>gb|AC161120.5| Mus musculus BAC clone RP23-84A2 from chromosome 10, complete sequence Length = 214638 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 tgctctcctgcctcagcctc 122 |||||||||||||||||||| Sbjct: 100402 tgctctcctgcctcagcctc 100421
>gb|AY773864.1| Arabidopsis thaliana clone pENTR221-At2g37960 hypothetical protein (At2g37960) mRNA, complete cds Length = 1443 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ccgccgcagctcctcctcct 97 |||||||||||||||||||| Sbjct: 347 ccgccgcagctcctcctcct 366
>ref|XM_512335.1| PREDICTED: Pan troglodytes hypothetical protein XP_512335 (LOC455663), mRNA Length = 2446 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gccaccgcgtcgctccggcc 148 |||||||||||||||||||| Sbjct: 84 gccaccgcgtcgctccggcc 103
>gb|AC151846.3| Mus musculus BAC clone RP23-13B8 from chromosome 10, complete sequence Length = 252639 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tgctctcctgcctcagcctc 122 |||||||||||||||||||| Sbjct: 65005 tgctctcctgcctcagcctc 64986
>ref|NM_021267.2| Homo sapiens LAG1 longevity assurance homolog 1 (S. cerevisiae) (LASS1), transcript variant 1, mRNA Length = 2565 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ctcctcctcctggccctgct 106 |||||||||||||||||||| Sbjct: 1434 ctcctcctcctggccctgct 1453
>ref|NM_002446.2| Homo sapiens mitogen-activated protein kinase kinase kinase 10 (MAP3K10), mRNA Length = 3428 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 cgccgccgcagctcctcctcctgg 99 ||||||||||||| |||||||||| Sbjct: 1553 cgccgccgcagctgctcctcctgg 1530
>ref|NG_003110.1| Homo sapiens LAG1 longevity assurance homolog 1 (S. cerevisiae), growth differentiation factor 1 transcription unit (LASS1-GDF1) on chromosome 19 Length = 28600 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ctcctcctcctggccctgct 106 |||||||||||||||||||| Sbjct: 26377 ctcctcctcctggccctgct 26396
>ref|XM_416480.1| PREDICTED: Gallus gallus similar to alpha-2-macroglobulin-1 (LOC418254), mRNA Length = 5032 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tcctcctggccctgctctcc 110 |||||||||||||||||||| Sbjct: 3998 tcctcctggccctgctctcc 4017
>gb|BC000755.2| Homo sapiens hepatoma-derived growth factor-related protein 2, transcript variant 2, mRNA (cDNA clone MGC:2641 IMAGE:3507276), complete cds Length = 2296 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgccgcagctcctcctcctg 98 |||||||||||||||||||| Sbjct: 1067 cgccgcagctcctcctcctg 1048
>ref|NM_001001520.1| Homo sapiens hepatoma-derived growth factor-related protein 2 (HDGF2), transcript variant 1, mRNA Length = 2344 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgccgcagctcctcctcctg 98 |||||||||||||||||||| Sbjct: 1115 cgccgcagctcctcctcctg 1096
>gb|AE009059.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 85 of 256 of the complete sequence Length = 11712 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 gtcgccgccacgaccgatctcgtc 65 ||||||||| |||||||||||||| Sbjct: 2500 gtcgccgccgcgaccgatctcgtc 2523
>ref|NM_032631.2| Homo sapiens hepatoma-derived growth factor-related protein 2 (HDGF2), transcript variant 2, mRNA Length = 2341 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgccgcagctcctcctcctg 98 |||||||||||||||||||| Sbjct: 1115 cgccgcagctcctcctcctg 1096
>gb|AC122746.7| Mus musculus chromosome 17, clone RP23-144A20, complete sequence Length = 218858 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 gccctgctctcctgcctcagcctc 122 |||||||||||||||| ||||||| Sbjct: 167032 gccctgctctcctgccgcagcctc 167055
>gb|AC127699.4| Mus musculus BAC clone RP24-114P21 from chromosome 7, complete sequence Length = 152811 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 tgctctcctgcctcagcctc 122 |||||||||||||||||||| Sbjct: 55379 tgctctcctgcctcagcctc 55398
>ref|XM_812461.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511621.130) partial mRNA Length = 2757 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 gcgccgccgcagctcctcctcctg 98 |||| ||||||||||||||||||| Sbjct: 2397 gcgctgccgcagctcctcctcctg 2374
>ref|XM_812700.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504741.230) partial mRNA Length = 2757 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 gcgccgccgcagctcctcctcctg 98 |||| ||||||||||||||||||| Sbjct: 2397 gcgctgccgcagctcctcctcctg 2374
>gb|AC125050.6| Mus musculus BAC clone RP23-372I18 from chromosome 7, complete sequence Length = 199810 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ctcctgcctcagcctcgtct 126 |||||||||||||||||||| Sbjct: 94057 ctcctgcctcagcctcgtct 94076
>gb|AC127333.3| Mus musculus BAC clone RP23-137F10 from 7, complete sequence Length = 185795 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ctcctgcctcagcctcgtct 126 |||||||||||||||||||| Sbjct: 185400 ctcctgcctcagcctcgtct 185381
>gb|AY358600.1| Homo sapiens clone DNA71286 HGDF-related pro 2 (UNQ785) mRNA, complete cds Length = 2272 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgccgcagctcctcctcctg 98 |||||||||||||||||||| Sbjct: 1086 cgccgcagctcctcctcctg 1067
>gb|AY345233.1| Oryza sativa transcription factor RCBF3 mRNA, complete cds Length = 850 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cccacgcaccgacgacgacg 171 |||||||||||||||||||| Sbjct: 560 cccacgcaccgacgacgacg 579
>emb|AL512326.25| Human DNA sequence from clone RP11-345I18 on chromosome 1 Contains the 5' end of the ABL2 gene for v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene), a ubiquinol-cytochrome c reductase (6.4kD) subunit (UQCR) pseudogene, a pseudogene similar to mouse SET translocation, a eukaryotic translation initiation factor 4A, isoform 1 pseudogene, a UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 3 (B3GALT3) pseudogene, a cytochrome c oxidase subunit Vb (COX5B) pseudogene, the 5' end of the SOAT1 gene for sterol O-acyltransferase (acyl-Coenzyme A: cholesterol acyltransferase) 1, complete sequence Length = 187270 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 tgctctcctgcctcagcctc 122 |||||||||||||||||||| Sbjct: 121138 tgctctcctgcctcagcctc 121157
>emb|AL357832.11| Human DNA sequence from clone RP11-125D12 on chromosome 6 Contains 2 novel genes, complete sequence Length = 147458 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ctcctgcctcagcctcgtct 126 |||||||||||||||||||| Sbjct: 142043 ctcctgcctcagcctcgtct 142062
>emb|AL162413.26| Human DNA sequence from clone RP11-109M17 on chromosome 9 Containe the 5' end of a pseudogene similar to part of A kinase (PRKA) anchor protein 8 (AKAP8), complete sequence Length = 114302 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 tgctctcctgcctcagcctc 122 |||||||||||||||||||| Sbjct: 15663 tgctctcctgcctcagcctc 15644
>emb|AL162292.20| Human DNA sequence from clone RP11-6L15 on chromosome 20 Contains the 5' end of the gene for the downstream of tyrosine kinase 5 (DOK5) protein and a CpG island, complete sequence Length = 100382 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 gccgccgcagctcctcctcctggc 100 |||||||| ||||||||||||||| Sbjct: 42021 gccgccgccgctcctcctcctggc 42044
>gb|AF294267.1| Homo sapiens hepatoma-derived growth factor 2 (HDGF2) mRNA, complete cds Length = 2279 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgccgcagctcctcctcctg 98 |||||||||||||||||||| Sbjct: 1084 cgccgcagctcctcctcctg 1065
>emb|AL133264.10| Human DNA sequence from clone RP3-369A17 on chromosome 6p22.1-22.3 Contains the 5' end of gene FLJ12619 (DKFZP564G182), a sigma 1 subunit adaptor-related protein complex 3 (AP3S1) (CLAPS3,Sigma3A) pseudogene and gene geminin (LOC51053). Contains 3 CpG islands, complete sequence Length = 83820 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 gccctgctctcctgcctcagcctc 122 ||||||| |||||||||||||||| Sbjct: 53315 gccctgccctcctgcctcagcctc 53338
>emb|AL049539.21|HSJ836N17 Human DNA sequence from clone RP5-836N17 on chromosome 20q11.1-11.21 Contains the 3' end of the HCK for hemopoietic cell kinase, the gene for novel protein (KIAA0255), the RPL24P1 gene for ribosomal protein L24 pseudogene 1 and two CpG Islands, complete sequence Length = 111694 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 cctcctggccctgctctcct 111 |||||||||||||||||||| Sbjct: 84694 cctcctggccctgctctcct 84675
>emb|AL035072.16|HS756P4 Human DNA sequence from clone RP4-756P4 on chromosome 20q13.11-13.2 Contains ESTs, STSs and GSSs, complete sequence Length = 76702 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 tgctctcctgcctcagcctc 122 |||||||||||||||||||| Sbjct: 42349 tgctctcctgcctcagcctc 42368
>emb|Z48615.1|HSMSTMR H.sapiens MST mRNA for serine/threonine kinase Length = 3138 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 cgccgccgcagctcctcctcctgg 99 ||||||||||||| |||||||||| Sbjct: 1425 cgccgccgcagctgctcctcctgg 1402
>emb|X90846.1|HARNAMLK2 H.sapiens mRNA for mixed lineage kinase 2 Length = 3454 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 cgccgccgcagctcctcctcctgg 99 ||||||||||||| |||||||||| Sbjct: 1553 cgccgccgcagctgctcctcctgg 1530
>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29 Length = 299050 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gccgccgcagctcctcctcc 96 |||||||||||||||||||| Sbjct: 226543 gccgccgcagctcctcctcc 226524
>gb|BC009449.1| Homo sapiens hepatoma-derived growth factor-related protein 2, mRNA (cDNA clone IMAGE:3530894), partial cds Length = 1945 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgccgcagctcctcctcctg 98 |||||||||||||||||||| Sbjct: 716 cgccgcagctcctcctcctg 697
>gb|AC109927.4| Homo sapiens BAC clone RP11-577B7 from 4, complete sequence Length = 112364 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ctctcctgcctcagcctcgt 124 |||||||||||||||||||| Sbjct: 6906 ctctcctgcctcagcctcgt 6925
>gb|AF285442.2| Homo sapiens chromosome 8 clone XX-72A2 map 8p23, complete sequence Length = 86113 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 gccctgctctcctgcctcagcctc 122 ||||||||||||||||||| |||| Sbjct: 46174 gccctgctctcctgcctcaacctc 46197
>emb|CR619502.1| full-length cDNA clone CS0DF036YK11 of Fetal brain of Homo sapiens (human) Length = 2104 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gccaccgcgtcgctccggcc 148 |||||||||||||||||||| Sbjct: 84 gccaccgcgtcgctccggcc 103
>emb|CR612289.1| full-length cDNA clone CS0DF015YB02 of Fetal brain of Homo sapiens (human) Length = 1595 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 gccgccgcagctcctcctcctggc 100 |||||||| ||||||||||||||| Sbjct: 29 gccgccgccgctcctcctcctggc 52
>emb|CR601525.1| full-length cDNA clone CS0DF027YK06 of Fetal brain of Homo sapiens (human) Length = 1916 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 gccgccgcagctcctcctcctggc 100 |||||||| ||||||||||||||| Sbjct: 18 gccgccgccgctcctcctcctggc 41
>gb|AC048352.18| Homo sapiens 12 BAC RP11-871F6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216792 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 tctcctgcctcagcctcgtc 125 |||||||||||||||||||| Sbjct: 209740 tctcctgcctcagcctcgtc 209721
>emb|CR590767.1| full-length cDNA clone CS0DE008YA05 of Placenta of Homo sapiens (human) Length = 1660 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgccgcagctcctcctcctg 98 |||||||||||||||||||| Sbjct: 485 cgccgcagctcctcctcctg 466
>ref|NM_001492.3| Homo sapiens growth differentiation factor 1 (GDF1), mRNA Length = 2565 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ctcctcctcctggccctgct 106 |||||||||||||||||||| Sbjct: 1434 ctcctcctcctggccctgct 1453
>gb|AC118344.2| Homo sapiens chromosome 19 clone CTC-425O23, complete sequence Length = 178335 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 cgccgccgcagctcctcctcctgg 99 ||||||||||||| |||||||||| Sbjct: 162468 cgccgccgcagctgctcctcctgg 162491
>gb|AC087114.7| Mus musculus Strain C57BL6/J Chromosome 10 RP23-309M23, complete sequence Length = 185825 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 tgctctcctgcctcagcctc 122 |||||||||||||||||||| Sbjct: 91297 tgctctcctgcctcagcctc 91316
>gb|AC005182.2| Homo sapiens 12p13.3 PAC RPCI1-29K11 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 76201 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 cgccgccgcagctcctcctcctgg 99 ||||||||| |||||||||||||| Sbjct: 12571 cgccgccgccgctcctcctcctgg 12594
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 gtcgccgccacgaccgatctcgtc 65 ||||||||| |||||||||||||| Sbjct: 931072 gtcgccgccgcgaccgatctcgtc 931095
>ref|XM_940456.1| PREDICTED: Homo sapiens hypothetical protein FLJ22184 (FLJ22184), mRNA Length = 2119 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gccaccgcgtcgctccggcc 148 |||||||||||||||||||| Sbjct: 78 gccaccgcgtcgctccggcc 97
>gb|AC025857.5| Homo sapiens chromosome 8, clone RP11-589N15, complete sequence Length = 175749 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 gccctgctctcctgcctcagcctc 122 ||||||||||||||||||| |||| Sbjct: 119148 gccctgctctcctgcctcaacctc 119171
>gb|AC011498.7| Homo sapiens chromosome 19 clone CTB-50L17, complete sequence Length = 273403 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgccgcagctcctcctcctg 98 |||||||||||||||||||| Sbjct: 125911 cgccgcagctcctcctcctg 125892
>gb|AC159132.2| Pan troglodytes BAC clone CH251-542P7 from chromosome unknown, complete sequence Length = 168297 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 tctcctgcctcagcctcgtctctg 129 ||||||||||||||||| |||||| Sbjct: 47431 tctcctgcctcagcctcctctctg 47408
>gb|AC145875.3| Pan troglodytes BAC clone RP43-6O8 from chromosome 7, complete sequence Length = 179919 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 gccctgctctcctgcctcagcctc 122 ||||||||||||||||||| |||| Sbjct: 6479 gccctgctctcctgcctcaacctc 6502
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cccacgcaccgacgacgacg 171 |||||||||||||||||||| Sbjct: 20103263 cccacgcaccgacgacgacg 20103244
>gb|AC082649.4| Homo sapiens BAC clone RP11-99E17 from 4, complete sequence Length = 173146 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 tctcctgcctcagcctcgtc 125 |||||||||||||||||||| Sbjct: 135762 tctcctgcctcagcctcgtc 135781
>gb|AC153616.8| Mus musculus 6 BAC RP23-328I7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195332 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 ctggccctgctctcctgcct 115 |||||||||||||||||||| Sbjct: 107303 ctggccctgctctcctgcct 107284
>dbj|AB089954.1| Micromonospora griseorubida gene cluster for the polyketide macrolide mycinamicin, partial and comeplete cds Length = 58343 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 caccgacgacgacggcctcg 177 |||||||||||||||||||| Sbjct: 50503 caccgacgacgacggcctcg 50484
>gb|AF300970.1| Oryza sativa DRE-binding protein 1A mRNA, complete cds Length = 895 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cccacgcaccgacgacgacg 171 |||||||||||||||||||| Sbjct: 564 cccacgcaccgacgacgacg 583
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 tcccacgcaccgacgacgac 170 |||||||||||||||||||| Sbjct: 2233958 tcccacgcaccgacgacgac 2233939
>gb|AC010336.8| Homo sapiens chromosome 19 clone CTD-3193O13, complete sequence Length = 160770 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gccaccgcgtcgctccggcc 148 |||||||||||||||||||| Sbjct: 55569 gccaccgcgtcgctccggcc 55550
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 ctgctctcctgcctcagcct 121 |||||||||||||||||||| Sbjct: 126346 ctgctctcctgcctcagcct 126327
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 gggcgcgcggacgtgctggt 231 |||||||||||||||||||| Sbjct: 1282707 gggcgcgcggacgtgctggt 1282688
>gb|AC007661.2|AC007661 Arabidopsis thaliana chromosome II section 205 of 255 of the complete sequence. Sequence from clones F13M22, T8P21, F16M14 Length = 95612 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 ccgccgcagctcctcctcct 97 |||||||||||||||||||| Sbjct: 51885 ccgccgcagctcctcctcct 51866
>dbj|AP006859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa273B05 Length = 41326 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 cccacgcaccgacgacgacg 171 |||||||||||||||||||| Sbjct: 38189 cccacgcaccgacgacgacg 38170
>emb|BX648239.1|HSM808387 Homo sapiens mRNA; cDNA DKFZp686H09108 (from clone DKFZp686H09108) Length = 7732 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 99 gccctgctctcctgcctcagcctc 122 ||||||||||||||||||| |||| Sbjct: 2792 gccctgctctcctgcctcaacctc 2769
>dbj|AK105599.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A04, full insert sequence Length = 955 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cccacgcaccgacgacgacg 171 |||||||||||||||||||| Sbjct: 612 cccacgcaccgacgacgacg 631
>dbj|AK071519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099L23, full insert sequence Length = 909 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cccacgcaccgacgacgacg 171 |||||||||||||||||||| Sbjct: 578 cccacgcaccgacgacgacg 597
>gb|AF466199.1| Sorghum bicolor putative receptor protein kinase, aminoalcoholphosphotransferase, putative growth-regulating factor 1, putative GAG-POL precursor, putative GAG-POL precursor, putative RIRE2 orf3, putative anthocyanin regulatory C1, putative protein T30F21.6, putative copia polyprotein, putative copia polyprotein, putative protein NP_196765.1, and gb protein genes, complete cds; and putative zinc finger protein gene, partial cds Length = 144159 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 ggcgccgccgcagctcctcctcct 97 ||||||||||| |||||||||||| Sbjct: 84051 ggcgccgccgctgctcctcctcct 84074
>gb|AF076786.1|AF076786 Oryctolagus cuniculus serum amyloid A-activating factor SAF-8 mRNA, partial cds Length = 1235 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cctcctggccctgctctcct 111 |||||||||||||||||||| Sbjct: 1154 cctcctggccctgctctcct 1173
>gb|AF076784.1|AF076784 Oryctolagus cuniculus serum amyloid A-activating factor SAF-1 mRNA, complete cds Length = 2535 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 cctcctggccctgctctcct 111 |||||||||||||||||||| Sbjct: 1781 cctcctggccctgctctcct 1800
>emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence between D16S3070 and D16S3275, containing Familial Mediterranean Fever gene disease Length = 239566 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 tctcctgcctcagcctcgtc 125 |||||||||||||||||||| Sbjct: 199033 tctcctgcctcagcctcgtc 199052
>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence Length = 53591 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 ctcctcctcctggccctgctctcc 110 ||||||||||| |||||||||||| Sbjct: 14961 ctcctcctcctcgccctgctctcc 14984
>gb|AC003972.1|AC003972 Homo sapiens DNA from chromosome 19, cosmid R33485 containing pNORF1, complete sequence Length = 42667 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ctcctcctcctggccctgct 106 |||||||||||||||||||| Sbjct: 38949 ctcctcctcctggccctgct 38930
>gb|AC150648.2| Mus musculus BAC clone RP23-235N5 from 7, complete sequence Length = 190414 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 ctcctgcctcagcctcgtct 126 |||||||||||||||||||| Sbjct: 179880 ctcctgcctcagcctcgtct 179899
>dbj|AB208892.1| Homo sapiens mRNA for hepatoma-derived growth factor-related protein 2 isoform 1 variant protein Length = 3100 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cgccgcagctcctcctcctg 98 |||||||||||||||||||| Sbjct: 876 cgccgcagctcctcctcctg 857
>dbj|AB209169.1| Homo sapiens mRNA for growth differentiation factor 1 variant protein Length = 706 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ctcctcctcctggccctgct 106 |||||||||||||||||||| Sbjct: 472 ctcctcctcctggccctgct 491
>gb|M62302.1|HUMGDF1 Human growth/differentiation factor 1 (GDF-1) mRNA, complete cds Length = 2510 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ctcctcctcctggccctgct 106 |||||||||||||||||||| Sbjct: 1386 ctcctcctcctggccctgct 1405 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,696,231 Number of Sequences: 3902068 Number of extensions: 3696231 Number of successful extensions: 810709 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 809099 Number of HSP's gapped (non-prelim): 1610 length of query: 272 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 250 effective length of database: 17,147,199,772 effective search space: 4286799943000 effective search space used: 4286799943000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
