ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast21a08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_482889.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1143 Score = 236 bits (119), Expect = 6e-59 Identities = 146/155 (94%) Strand = Plus / Plus Query: 7 gacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaac 66 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 202 gacatcctccccaactacttcaagcacagcaacttctcctccttcgtccgccagctcaac 261 Query: 67 acctacgggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttccgc 126 || || ||||| ||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 262 acatatgggtttaggaaggtcgtgccggagaggtgggagttcgccaacgagttcttcagg 321 Query: 127 aagggggagaagcagctgctgtgcgagatccaccg 161 ||||| ||||||||||||||||||||||||||||| Sbjct: 322 aagggcgagaagcagctgctgtgcgagatccaccg 356
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 170 bits (86), Expect = 3e-39 Identities = 233/280 (83%), Gaps = 9/280 (3%) Strand = Plus / Minus Query: 73 gggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttccgcaagggg 132 |||||| ||||||||||||||||| ||||||||||||| |||||||||||| | |||||| Sbjct: 17055956 gggttcaggaaggtcgtgccggagaggtgggagttcgcgaacgagttcttcaggaagggg 17055897 Query: 133 gagaagcagctgctgtgcgagatccaccgccggaagacgtc---cgggtccacgacgtcg 189 |||||||||||||| ||||||||||||| |||||||||| || || ||| ||||| Sbjct: 17055896 gagaagcagctgctcaccgagatccaccgcaggaagacgtcgtccgcatcgacggcgtcg 17055837 Query: 190 tcgtctccgccacccttcttcgcgcctccgcacttcccgctgtt---ccaccccggcgtt 246 |||||||||| || ||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 17055836 ccgtctccgccgccgttcttcgcgccgccgcacttccctctgttccaccaccccggcgtc 17055777 Query: 247 tccgtcgcccatcaccaccagcagttcgtgggcgaggacggggcaatggcggcgcacgct 306 | | || || |||||||| |||||| ||||| ||||||| |||||||||| | Sbjct: 17055776 gcggcggctcagcaccaccacgcgttcgtcggcgacgacggggttgtggcggcgca---t 17055720 Query: 307 ggcatgggcgtcccgttcatgcagccgcattggcgggagc 346 ||||| ||| | |||||| |||||||||||||||||||| Sbjct: 17055719 ggcatcggcatgccgttcccgcagccgcattggcgggagc 17055680 Score = 125 bits (63), Expect = 1e-25 Identities = 69/71 (97%) Strand = Plus / Minus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 17056114 gcgcgacatcctccccaactacttcaagcacaacaacttctcgtcgttcgtccgccagct 17056055 Query: 63 caacacctacg 73 ||||||||||| Sbjct: 17056054 caacacctacg 17056044 Score = 99.6 bits (50), Expect = 8e-18 Identities = 59/62 (95%) Strand = Plus / Minus Query: 430 gcggtgctgatggacgagaacgagcggctgcggcgcagcaacacggcgctgctgcaggag 489 |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 17055581 gcggtgctgatggaggagaacgagcgcctgcggcggagcaacacggcgctgctgcaggag 17055522 Query: 490 ct 491 || Sbjct: 17055521 ct 17055520 Score = 89.7 bits (45), Expect = 8e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 20293400 tcctccccaagtacttcaagcacaacaacttctccagcttcgtgcgccagctcaacacct 20293341 Query: 71 a 71 | Sbjct: 20293340 a 20293340 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 17167391 acttcaagcactgcaacttctcctccttcgtccgccagctcaacacctacg 17167441 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 80 ggaaggtcgtgccggagcggtgggagttcgccaacgagttcttccg 125 ||||| |||||||||| |||||||||||||||||||| | |||||| Sbjct: 20293211 ggaagatcgtgccggaccggtgggagttcgccaacgactgcttccg 20293166 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 76 ttccggaaggtcgtgccggagcggtgggagttcgccaacg 115 ||||||||||| ||||| || ||||||||||||||||||| Sbjct: 17173324 ttccggaaggtggtgcccgatcggtgggagttcgccaacg 17173363
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 170 bits (86), Expect = 3e-39 Identities = 233/280 (83%), Gaps = 9/280 (3%) Strand = Plus / Minus Query: 73 gggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttccgcaagggg 132 |||||| ||||||||||||||||| ||||||||||||| |||||||||||| | |||||| Sbjct: 49615 gggttcaggaaggtcgtgccggagaggtgggagttcgcgaacgagttcttcaggaagggg 49556 Query: 133 gagaagcagctgctgtgcgagatccaccgccggaagacgtc---cgggtccacgacgtcg 189 |||||||||||||| ||||||||||||| |||||||||| || || ||| ||||| Sbjct: 49555 gagaagcagctgctcaccgagatccaccgcaggaagacgtcgtccgcatcgacggcgtcg 49496 Query: 190 tcgtctccgccacccttcttcgcgcctccgcacttcccgctgtt---ccaccccggcgtt 246 |||||||||| || ||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 49495 ccgtctccgccgccgttcttcgcgccgccgcacttccctctgttccaccaccccggcgtc 49436 Query: 247 tccgtcgcccatcaccaccagcagttcgtgggcgaggacggggcaatggcggcgcacgct 306 | | || || |||||||| |||||| ||||| ||||||| |||||||||| | Sbjct: 49435 gcggcggctcagcaccaccacgcgttcgtcggcgacgacggggttgtggcggcgca---t 49379 Query: 307 ggcatgggcgtcccgttcatgcagccgcattggcgggagc 346 ||||| ||| | |||||| |||||||||||||||||||| Sbjct: 49378 ggcatcggcatgccgttcccgcagccgcattggcgggagc 49339 Score = 125 bits (63), Expect = 1e-25 Identities = 69/71 (97%) Strand = Plus / Minus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 49773 gcgcgacatcctccccaactacttcaagcacaacaacttctcgtcgttcgtccgccagct 49714 Query: 63 caacacctacg 73 ||||||||||| Sbjct: 49713 caacacctacg 49703 Score = 99.6 bits (50), Expect = 8e-18 Identities = 59/62 (95%) Strand = Plus / Minus Query: 430 gcggtgctgatggacgagaacgagcggctgcggcgcagcaacacggcgctgctgcaggag 489 |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 49240 gcggtgctgatggaggagaacgagcgcctgcggcggagcaacacggcgctgctgcaggag 49181 Query: 490 ct 491 || Sbjct: 49180 ct 49179
>gb|BT018502.1| Zea mays clone EL01N0427E10.d mRNA sequence Length = 1544 Score = 161 bits (81), Expect = 3e-36 Identities = 135/153 (88%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacggg 75 ||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 455 cccaagtacttcaagcacaacaacttctccagcttcgtgcgccagctcaacacctacggg 514 Query: 76 ttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttccgcaagggggag 135 ||| ||||| |||||||||| ||||||||||||| ||||| | ||||||| |||||| Sbjct: 515 ttcaggaagatcgtgccggacaggtgggagttcgcgaacgactgcttccgccgaggggag 574 Query: 136 aagcagctgctgtgcgagatccaccgccggaag 168 |||| |||||| ||||| || |||||||||||| Sbjct: 575 aagcggctgctctgcgacatacaccgccggaag 607
>ref|XM_483635.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1499 Score = 145 bits (73), Expect = 2e-31 Identities = 142/165 (86%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 337 cgcgacctcctccccaagtacttcaagcacaacaacttctccagcttcgtccgccagctc 396 Query: 64 aacacctacgggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttc 123 ||||||||||| || ||||| | || ||||| ||||||||||||||||||| | |||| Sbjct: 397 aacacctacggatttaggaagattgtcccggacaggtgggagttcgccaacgactgcttc 456 Query: 124 cgcaagggggagaagcagctgctgtgcgagatccaccgccggaag 168 ||| ||||| || |||||| |||||||| |||||||||||| Sbjct: 457 cgccgaggggaacggcggctgctctgcgagatacaccgccggaag 501 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 441 ggacgagaacgagcggctgcggcg 464 |||||||||||||||||||||||| Sbjct: 711 ggacgagaacgagcggctgcggcg 734
>gb|AY344484.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF2 mRNA, complete cds Length = 1938 Score = 145 bits (73), Expect = 2e-31 Identities = 142/165 (86%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 689 cgcgacctcctccccaagtacttcaagcacaacaacttctccagcttcgtccgccagctc 748 Query: 64 aacacctacgggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttc 123 ||||||||||| || ||||| | || ||||| ||||||||||||||||||| | |||| Sbjct: 749 aacacctacggatttaggaagattgtcccggacaggtgggagttcgccaacgactgcttc 808 Query: 124 cgcaagggggagaagcagctgctgtgcgagatccaccgccggaag 168 ||| ||||| || |||||| |||||||| |||||||||||| Sbjct: 809 cgccgaggggaacggcggctgctctgcgagatacaccgccggaag 853 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 441 ggacgagaacgagcggctgcggcg 464 |||||||||||||||||||||||| Sbjct: 1063 ggacgagaacgagcggctgcggcg 1086
>dbj|AK101700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060E19, full insert sequence Length = 1499 Score = 145 bits (73), Expect = 2e-31 Identities = 142/165 (86%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 337 cgcgacctcctccccaagtacttcaagcacaacaacttctccagcttcgtccgccagctc 396 Query: 64 aacacctacgggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttc 123 ||||||||||| || ||||| | || ||||| ||||||||||||||||||| | |||| Sbjct: 397 aacacctacggatttaggaagattgtcccggacaggtgggagttcgccaacgactgcttc 456 Query: 124 cgcaagggggagaagcagctgctgtgcgagatccaccgccggaag 168 ||| ||||| || |||||| |||||||| |||||||||||| Sbjct: 457 cgccgaggggaacggcggctgctctgcgagatacaccgccggaag 501 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 441 ggacgagaacgagcggctgcggcg 464 |||||||||||||||||||||||| Sbjct: 711 ggacgagaacgagcggctgcggcg 734
>dbj|AK061433.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A01, full insert sequence Length = 1565 Score = 137 bits (69), Expect = 4e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccgga 82 ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 564 acttcaagcactgcaacttctcctccttcgtccgccagctcaacacctacggtttccgga 623 Query: 83 aggtcgtgccggagcggtgggagttcgccaacg 115 |||| ||||| || ||||||||||||||||||| Sbjct: 624 aggtggtgcccgatcggtgggagttcgccaacg 656
>ref|XM_473539.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 918 Score = 133 bits (67), Expect = 6e-28 Identities = 124/143 (86%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| |||||||||| |||||||||||| |||||||||||||||||| ||||||||| Sbjct: 139 cgcgacctcctccccaagcacttcaagcacagcaacttctcctccttcgtgcgccagctc 198 Query: 64 aacacctacgggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttc 123 ||||||||||| ||| |||||| ||| |||| ||||||||||||||||||| | |||| Sbjct: 199 aacacctacggattcaagaaggtggtggcggataggtgggagttcgccaacgactgcttc 258 Query: 124 cgcaagggggagaagcagctgct 146 | | ||||||||||| ||||| Sbjct: 259 aggagaggggagaagcacctgct 281
>gb|AY344483.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF1 mRNA, complete cds Length = 1172 Score = 133 bits (67), Expect = 6e-28 Identities = 124/143 (86%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| |||||||||| |||||||||||| |||||||||||||||||| ||||||||| Sbjct: 209 cgcgacctcctccccaagcacttcaagcacagcaacttctcctccttcgtgcgccagctc 268 Query: 64 aacacctacgggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttc 123 ||||||||||| ||| |||||| ||| |||| ||||||||||||||||||| | |||| Sbjct: 269 aacacctacggattcaagaaggtggtggcggataggtgggagttcgccaacgactgcttc 328 Query: 124 cgcaagggggagaagcagctgct 146 | | ||||||||||| ||||| Sbjct: 329 aggagaggggagaagcacctgct 351
>dbj|AK106525.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-D11, full insert sequence Length = 1422 Score = 133 bits (67), Expect = 6e-28 Identities = 103/115 (89%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 351 tcctccccaagtacttcaagcacaacaacttctccagcttcgtgcgccagctcaacacct 410 Query: 71 acgggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttccg 125 | || || ||||| |||||||||| |||||||||||||||||||| | |||||| Sbjct: 411 atggatttaggaagatcgtgccggaccggtgggagttcgccaacgactgcttccg 465
>dbj|AK105409.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F08, full insert sequence Length = 1475 Score = 133 bits (67), Expect = 6e-28 Identities = 103/115 (89%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 109 tcctccccaagtacttcaagcacaacaacttctccagcttcgtgcgccagctcaacacct 168 Query: 71 acgggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttccg 125 | || || ||||| |||||||||| |||||||||||||||||||| | |||||| Sbjct: 169 atggatttaggaagatcgtgccggaccggtgggagttcgccaacgactgcttccg 223
>gb|AY459340.1| Oryza sativa (japonica cultivar-group) clone CL000798.1 R2R3-MYB gene region Length = 12635 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 80 ggaaggtcgtgccggagcggtgggagttcgccaacgagttcttccgcaagggggagaagc 139 ||||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||||| Sbjct: 12380 ggaaggtcgtgccggagaggtgggagttcgccaacgagttcttcaggaagggcgagaagc 12439 Query: 140 agctgctgtgcgagatccaccg 161 |||||||||||||||||||||| Sbjct: 12440 agctgctgtgcgagatccaccg 12461 Score = 115 bits (58), Expect = 1e-22 Identities = 61/62 (98%) Strand = Plus / Plus Query: 7 gacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaac 66 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 12214 gacatcctccccaactacttcaagcacagcaacttctcctccttcgtccgccagctcaac 12273 Query: 67 ac 68 || Sbjct: 12274 ac 12275
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 80 ggaaggtcgtgccggagcggtgggagttcgccaacgagttcttccgcaagggggagaagc 139 ||||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||||| Sbjct: 23151923 ggaaggtcgtgccggagaggtgggagttcgccaacgagttcttcaggaagggcgagaagc 23151864 Query: 140 agctgctgtgcgagatccaccg 161 |||||||||||||||||||||| Sbjct: 23151863 agctgctgtgcgagatccaccg 23151842 Score = 115 bits (58), Expect = 1e-22 Identities = 61/62 (98%) Strand = Plus / Minus Query: 7 gacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaac 66 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 23152089 gacatcctccccaactacttcaagcacagcaacttctcctccttcgtccgccagctcaac 23152030 Query: 67 ac 68 || Sbjct: 23152029 ac 23152028 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 27376893 cgcgacctcctccccaagtacttcaagcacaacaacttctccagcttcgtccgccagctc 27376834 Query: 64 aacacctacg 73 |||||||||| Sbjct: 27376833 aacacctacg 27376824 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 98 ggtgggagttcgccaacgagttcttccgcaagggggagaagcagctgctgtgcgagatcc 157 ||||||||||||||||||| | ||||||| ||||| || |||||| |||||||| | Sbjct: 27376698 ggtgggagttcgccaacgactgcttccgccgaggggaacggcggctgctctgcgagatac 27376639 Query: 158 accgccggaag 168 ||||||||||| Sbjct: 27376638 accgccggaag 27376628 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 441 ggacgagaacgagcggctgcggcg 464 |||||||||||||||||||||||| Sbjct: 27376418 ggacgagaacgagcggctgcggcg 27376395
>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0461F06 Length = 147891 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 80 ggaaggtcgtgccggagcggtgggagttcgccaacgagttcttccgcaagggggagaagc 139 ||||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||||| Sbjct: 75022 ggaaggtcgtgccggagaggtgggagttcgccaacgagttcttcaggaagggcgagaagc 74963 Query: 140 agctgctgtgcgagatccaccg 161 |||||||||||||||||||||| Sbjct: 74962 agctgctgtgcgagatccaccg 74941 Score = 115 bits (58), Expect = 1e-22 Identities = 61/62 (98%) Strand = Plus / Minus Query: 7 gacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaac 66 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 75188 gacatcctccccaactacttcaagcacagcaacttctcctccttcgtccgccagctcaac 75129 Query: 67 ac 68 || Sbjct: 75128 ac 75127
>dbj|AK101182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029F08, full insert sequence Length = 1567 Score = 129 bits (65), Expect = 9e-27 Identities = 86/93 (92%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccgga 82 ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 561 acttcaagcactgcaacttctcctccttcgtccgccagctcaacacctacggtttccgga 620 Query: 83 aggtcgtgccggagcggtgggagttcgccaacg 115 ||| ||||| || ||||||||||||||||||| Sbjct: 621 gggtggtgcccgatcggtgggagttcgccaacg 653
>gb|AY344494.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF12 mRNA, complete cds Length = 1233 Score = 119 bits (60), Expect = 9e-24 Identities = 105/120 (87%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||| Sbjct: 330 cgcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctc 389 Query: 64 aacacctacgggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttc 123 |||||||| || ||| ||||| | || | || |||||||||||||||||||||||||| Sbjct: 390 aacacctatggtttcaggaagatagtagctgacaggtgggagttcgccaacgagttcttc 449
>ref|XM_479293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1526 Score = 119 bits (60), Expect = 9e-24 Identities = 105/120 (87%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||| Sbjct: 306 cgcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctc 365 Query: 64 aacacctacgggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttc 123 |||||||| || ||| ||||| | || | || |||||||||||||||||||||||||| Sbjct: 366 aacacctatggtttcaggaagatagtagctgacaggtgggagttcgccaacgagttcttc 425
>dbj|AK099354.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042P04, full insert sequence Length = 1416 Score = 119 bits (60), Expect = 9e-24 Identities = 105/120 (87%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||| Sbjct: 201 cgcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctc 260 Query: 64 aacacctacgggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttc 123 |||||||| || ||| ||||| | || | || |||||||||||||||||||||||||| Sbjct: 261 aacacctatggtttcaggaagatagtagctgacaggtgggagttcgccaacgagttcttc 320
>dbj|AK063952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F07, full insert sequence Length = 1526 Score = 119 bits (60), Expect = 9e-24 Identities = 105/120 (87%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||| Sbjct: 306 cgcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctc 365 Query: 64 aacacctacgggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttc 123 |||||||| || ||| ||||| | || | || |||||||||||||||||||||||||| Sbjct: 366 aacacctatggtttcaggaagatagtagctgacaggtgggagttcgccaacgagttcttc 425
>dbj|AK106545.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-F03, full insert sequence Length = 1756 Score = 117 bits (59), Expect = 4e-23 Identities = 101/115 (87%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||||| |||||||||||||||||||||||| | |||| || ||||||||||||| Sbjct: 350 tcctccccaagtacttcaagcacaacaacttctccagcctcgtgcgtcagctcaacacct 409 Query: 71 acgggttccggaaggtcgtgccggagcggtgggagttcgccaacgagttcttccg 125 | || || ||||| |||||||||| |||||||||||||||||||| | |||||| Sbjct: 410 atggatttaggaagatcgtgccggaccggtgggagttcgccaacgactgcttccg 464
>ref|XM_469703.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1685 Score = 113 bits (57), Expect = 6e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccg 80 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 285 ctacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacgggttcag 344 Query: 81 gaaggtcgtgccggagcggtgggagttcgccaacgag 117 |||||||| ||||| | ||||||||||| |||||| Sbjct: 345 gaaggtcgatccggatagatgggagttcgcgaacgag 381
>gb|AY344486.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF4 mRNA, complete cds Length = 1322 Score = 113 bits (57), Expect = 6e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccg 80 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 306 ctacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacgggttcag 365 Query: 81 gaaggtcgtgccggagcggtgggagttcgccaacgag 117 |||||||| ||||| | ||||||||||| |||||| Sbjct: 366 gaaggtcgatccggatagatgggagttcgcgaacgag 402
>gb|AY332465.1| Oryza sativa (japonica cultivar-group) putative heat shock protein (HSP2) mRNA, complete cds Length = 1385 Score = 113 bits (57), Expect = 6e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccg 80 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 380 ctacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacgggttcag 439 Query: 81 gaaggtcgtgccggagcggtgggagttcgccaacgag 117 |||||||| ||||| | ||||||||||| |||||| Sbjct: 440 gaaggtcgatccggatagatgggagttcgcgaacgag 476
>gb|AY998118.1| Oryza sativa heat shock protein 41 mRNA, complete cds Length = 1945 Score = 113 bits (57), Expect = 6e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccg 80 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 542 ctacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacgggttcag 601 Query: 81 gaaggtcgtgccggagcggtgggagttcgccaacgag 117 |||||||| ||||| | ||||||||||| |||||| Sbjct: 602 gaaggtcgatccggatagatgggagttcgcgaacgag 638
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0544G09 Length = 137481 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 3688 cgcgacctcctccccaagtacttcaagcacaacaacttctccagcttcgtccgccagctc 3629 Query: 64 aacacctacg 73 |||||||||| Sbjct: 3628 aacacctacg 3619 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 98 ggtgggagttcgccaacgagttcttccgcaagggggagaagcagctgctgtgcgagatcc 157 ||||||||||||||||||| | ||||||| ||||| || |||||| |||||||| | Sbjct: 3493 ggtgggagttcgccaacgactgcttccgccgaggggaacggcggctgctctgcgagatac 3434 Query: 158 accgccggaag 168 ||||||||||| Sbjct: 3433 accgccggaag 3423 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 441 ggacgagaacgagcggctgcggcg 464 |||||||||||||||||||||||| Sbjct: 3213 ggacgagaacgagcggctgcggcg 3190
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 107 bits (54), Expect = 3e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 78420 cgcgacctcctccccaagtacttcaagcacaacaacttctccagcttcgtccgccagctc 78361 Query: 64 aacacctacg 73 |||||||||| Sbjct: 78360 aacacctacg 78351 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 98 ggtgggagttcgccaacgagttcttccgcaagggggagaagcagctgctgtgcgagatcc 157 ||||||||||||||||||| | ||||||| ||||| || |||||| |||||||| | Sbjct: 78225 ggtgggagttcgccaacgactgcttccgccgaggggaacggcggctgctctgcgagatac 78166 Query: 158 accgccggaag 168 ||||||||||| Sbjct: 78165 accgccggaag 78155 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 441 ggacgagaacgagcggctgcggcg 464 |||||||||||||||||||||||| Sbjct: 77945 ggacgagaacgagcggctgcggcg 77922
>ref|XM_470452.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1920 Score = 103 bits (52), Expect = 5e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 ||||||| |||||||||| ||||||||||||| ||||||||||||||||||| | ||||| Sbjct: 219 gcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtcaggcagct 278 Query: 63 caacacctacgg 74 |||||||||||| Sbjct: 279 caacacctacgg 290
>gb|AY344485.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF3 mRNA, complete cds Length = 1742 Score = 103 bits (52), Expect = 5e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 ||||||| |||||||||| ||||||||||||| ||||||||||||||||||| | ||||| Sbjct: 318 gcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtcaggcagct 377 Query: 63 caacacctacgg 74 |||||||||||| Sbjct: 378 caacacctacgg 389
>dbj|AK106118.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E07, full insert sequence Length = 1635 Score = 103 bits (52), Expect = 5e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 ||||||| |||||||||| ||||||||||||| ||||||||||||||||||| | ||||| Sbjct: 253 gcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtcaggcagct 312 Query: 63 caacacctacgg 74 |||||||||||| Sbjct: 313 caacacctacgg 324
>dbj|AK100430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088F14, full insert sequence Length = 2051 Score = 103 bits (52), Expect = 5e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 ||||||| |||||||||| ||||||||||||| ||||||||||||||||||| | ||||| Sbjct: 344 gcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtcaggcagct 403 Query: 63 caacacctacgg 74 |||||||||||| Sbjct: 404 caacacctacgg 415
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 ||||||| |||||||||| ||||||||||||| ||||||||||||||||||| | ||||| Sbjct: 83362 gcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtcaggcagct 83421 Query: 63 caacacctacg 73 ||||||||||| Sbjct: 83422 caacacctacg 83432
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 ||||||| |||||||||| ||||||||||||| ||||||||||||||||||| | ||||| Sbjct: 35685584 gcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtcaggcagct 35685643 Query: 63 caacacctacg 73 ||||||||||| Sbjct: 35685644 caacacctacg 35685654 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 30313729 ctacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacg 30313677 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 ||||||| ||||||||||||||||||||||||||| ||||||| | ||||||||||||| Sbjct: 14183306 tcctcccaaactacttcaagcacaacaacttctccagcttcgtcaggcagctcaacacct 14183247 Query: 71 a 71 | Sbjct: 14183246 a 14183246 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 15 ccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||| |||||||||| ||| ||||||||| |||||||||||||||||||||||||| Sbjct: 25743627 ccccaagtacttcaagcgcaataacttctccagcttcgtccgccagctcaacacctacg 25743569 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 3324246 cttcaagcacaacaatttctccagcttcgtccgccagctcaacacctacg 3324295 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||||||||||||||| ||||||||| |||||||| ||||| Sbjct: 32802780 tacttcaagcacaacaacttctccagcttcgtccggcagctcaataccta 32802829 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 98 ggtgggagttcgccaacgagttcttc 123 |||||||||||||||||||||||||| Sbjct: 14181769 ggtgggagttcgccaacgagttcttc 14181744 Score = 42.1 bits (21), Expect = 1.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||| ||| ||| || |||| | ||||||||||||||||| Sbjct: 6506292 acttcaagcacagcaatttcaccagcttcatacgccagctcaacaccta 6506340 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gagaacgagcggctgcggcg 464 |||||||||||||||||||| Sbjct: 25743150 gagaacgagcggctgcggcg 25743131
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 ||||||| |||||||||| ||||||||||||| ||||||||||||||||||| | ||||| Sbjct: 35775657 gcgcgacctcctccccaagtacttcaagcacagcaacttctcctccttcgtcaggcagct 35775716 Query: 63 caacacctacg 73 ||||||||||| Sbjct: 35775717 caacacctacg 35775727 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 30405151 ctacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacg 30405099 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 ||||||| ||||||||||||||||||||||||||| ||||||| | ||||||||||||| Sbjct: 14178281 tcctcccaaactacttcaagcacaacaacttctccagcttcgtcaggcagctcaacacct 14178222 Query: 71 a 71 | Sbjct: 14178221 a 14178221 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Minus Query: 15 ccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||| |||||||||| ||| ||||||||| |||||||||||||||||||||||||| Sbjct: 25834936 ccccaagtacttcaagcgcaataacttctccagcttcgtccgccagctcaacacctacg 25834878 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 3324357 cttcaagcacaacaatttctccagcttcgtccgccagctcaacacctacg 3324406 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||||||||||||||| ||||||||| |||||||| ||||| Sbjct: 32893290 tacttcaagcacaacaacttctccagcttcgtccggcagctcaataccta 32893339 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 98 ggtgggagttcgccaacgagttcttc 123 |||||||||||||||||||||||||| Sbjct: 14176744 ggtgggagttcgccaacgagttcttc 14176719 Score = 42.1 bits (21), Expect = 1.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||| ||| ||| || |||| | ||||||||||||||||| Sbjct: 6505505 acttcaagcacagcaatttcaccagcttcatacgccagctcaacaccta 6505553 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 gagaacgagcggctgcggcg 464 |||||||||||||||||||| Sbjct: 25834459 gagaacgagcggctgcggcg 25834440
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 99.6 bits (50), Expect = 8e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| |||||||||| |||||||||||| |||||||||||||||||| ||||||||| Sbjct: 38692 cgcgacctcctccccaagcacttcaagcacagcaacttctcctccttcgtgcgccagctc 38751 Query: 64 aacacctacg 73 |||||||||| Sbjct: 38752 aacacctacg 38761 Score = 44.1 bits (22), Expect = 0.43 Identities = 55/66 (83%) Strand = Plus / Plus Query: 81 gaaggtcgtgccggagcggtgggagttcgccaacgagttcttccgcaagggggagaagca 140 |||||| ||| |||| ||||||||||||||||||| | |||| | | ||||||||||| Sbjct: 38871 gaaggtggtggcggataggtgggagttcgccaacgactgcttcaggagaggggagaagca 38930 Query: 141 gctgct 146 ||||| Sbjct: 38931 cctgct 38936
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 99.6 bits (50), Expect = 8e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| |||||||||| |||||||||||| |||||||||||||||||| ||||||||| Sbjct: 28547902 cgcgacctcctccccaagcacttcaagcacagcaacttctcctccttcgtgcgccagctc 28547961 Query: 64 aacacctacg 73 |||||||||| Sbjct: 28547962 aacacctacg 28547971 Score = 44.1 bits (22), Expect = 0.43 Identities = 55/66 (83%) Strand = Plus / Plus Query: 81 gaaggtcgtgccggagcggtgggagttcgccaacgagttcttccgcaagggggagaagca 140 |||||| ||| |||| ||||||||||||||||||| | |||| | | ||||||||||| Sbjct: 28548081 gaaggtggtggcggataggtgggagttcgccaacgactgcttcaggagaggggagaagca 28548140 Query: 141 gctgct 146 ||||| Sbjct: 28548141 cctgct 28548146
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||| Sbjct: 26620388 cgcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctc 26620447 Query: 64 aacaccta 71 |||||||| Sbjct: 26620448 aacaccta 26620455 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 4172096 cttcaagcacaacaacttctccagcttcgtcaggcagctcaacaccta 4172143 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 98 ggtgggagttcgccaacgagttcttc 123 |||||||||||||||||||||||||| Sbjct: 26622147 ggtgggagttcgccaacgagttcttc 26622172
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||| Sbjct: 165659 cgcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctc 165718 Query: 64 aacaccta 71 |||||||| Sbjct: 165719 aacaccta 165726 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 98 ggtgggagttcgccaacgagttcttc 123 |||||||||||||||||||||||||| Sbjct: 167418 ggtgggagttcgccaacgagttcttc 167443
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctc 63 |||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||| Sbjct: 37992 cgcgacctcctccccaactacttcaagcacaacaacttctccagcttcgtcaggcagctc 38051 Query: 64 aacaccta 71 |||||||| Sbjct: 38052 aacaccta 38059 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 98 ggtgggagttcgccaacgagttcttc 123 |||||||||||||||||||||||||| Sbjct: 39751 ggtgggagttcgccaacgagttcttc 39776
>dbj|AK064271.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-E08, full insert sequence Length = 1527 Score = 95.6 bits (48), Expect = 1e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccggaa 83 |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 415 cttcaagcacgccaacttctcctccttcgttcgccagctcaacacctacgggttccgaaa 474 Query: 84 ggtc 87 |||| Sbjct: 475 ggtc 478
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 89.7 bits (45), Expect = 8e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 72527 tcctccccaagtacttcaagcacaacaacttctccagcttcgtgcgccagctcaacacct 72468 Query: 71 a 71 | Sbjct: 72467 a 72467 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 80 ggaaggtcgtgccggagcggtgggagttcgccaacgagttcttccg 125 ||||| |||||||||| |||||||||||||||||||| | |||||| Sbjct: 72338 ggaagatcgtgccggaccggtgggagttcgccaacgactgcttccg 72293
>emb|Z46955.1|GMHSF31 G.max mRNA for heat shock transcription factor 31 Length = 1086 Score = 87.7 bits (44), Expect = 3e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 19 aactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttc 78 ||||||||||| ||||||||||||||| |||||| ||||| ||||||||||| || || Sbjct: 25 aactacttcaaacacaacaacttctccagcttcgttcgccaactcaacacctatggtttt 84 Query: 79 cggaaggtcgtgccggagcggtgggagttcgccaacgagttcttccgcaagggggagaag 138 | ||| | ||||| || || ||||||||||| ||||| |||||| ||||| ||||| Sbjct: 85 agaaagattgtgccagaccgatgggagttcgcgaacgaattcttcaagaagggagagaaa 144 Query: 139 cagctgctgtgcgagatcca 158 || |||||||||||||||| Sbjct: 145 cacttgctgtgcgagatcca 164
>dbj|AK106488.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A02, full insert sequence Length = 1392 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccgga 82 ||||||||||| |||||||||| |||||||||||||||||||||||||||||| || | Sbjct: 241 acttcaagcactccaacttctccagcttcgtccgccagctcaacacctacgggtttcgca 300 Query: 83 aggtcgtgccggagcggtgggagttcgc 110 |||| | ||||| ||||||||||||| Sbjct: 301 aggttgatccggacaggtgggagttcgc 328
>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1342C04 Length = 172097 Score = 85.7 bits (43), Expect = 1e-13 Identities = 49/51 (96%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 108148 acttcaagcactgcaacttctcctccttcgtccgccagctcaacacctacg 108198 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 76 ttccggaaggtcgtgccggagcggtgggagttcgccaacg 115 ||||||||||| ||||| || ||||||||||||||||||| Sbjct: 114081 ttccggaaggtggtgcccgatcggtgggagttcgccaacg 114120
>ref|XM_466050.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1808 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 ||||||| | |||||| || ||||||||||||||||||||||| ||||||||| ||||| Sbjct: 390 gcgcgacgtgctcccccaccacttcaagcacaacaacttctccagcttcgtccggcagct 449 Query: 63 caacaccta 71 ||||||||| Sbjct: 450 caacaccta 458
>ref|NM_196523.1| Oryza sativa (japonica cultivar-group) putative auxin-induced protein (OSJNBa0006I13.10), mRNA Length = 1077 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccggaa 83 |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| | || Sbjct: 255 cttcaagcacaacaacttctccagcttcgtccggcagctcaacacctacggcttcagaaa 314 Query: 84 ggtcg 88 ||||| Sbjct: 315 ggtcg 319
>gb|AY344488.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF6 mRNA, complete cds Length = 1336 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccggaa 83 |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| | || Sbjct: 289 cttcaagcacaacaacttctccagcttcgtccggcagctcaacacctacggcttcagaaa 348 Query: 84 ggtcg 88 ||||| Sbjct: 349 ggtcg 353
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0012F18, from chromosome 3, complete sequence Length = 122903 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 ||||||| ||||||||||||||||||||||||||| ||||||| | ||||||||||||| Sbjct: 57597 tcctcccaaactacttcaagcacaacaacttctccagcttcgtcaggcagctcaacacct 57538 Query: 71 a 71 | Sbjct: 57537 a 57537 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 98 ggtgggagttcgccaacgagttcttc 123 |||||||||||||||||||||||||| Sbjct: 56060 ggtgggagttcgccaacgagttcttc 56035
>gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete sequence Length = 130359 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 105409 ctacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacg 105357
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 20650742 acttcaagcacaacaacttctccagcttcgtccgccagctcaacaccta 20650694 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||||||||| |||||||||| |||| ||||||||||||||||||||| Sbjct: 21413743 acttcaagcacgccaacttctccagcttcctccgccagctcaacacctacg 21413793 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ggtgggagttcgccaacgag 117 |||||||||||||||||||| Sbjct: 21413940 ggtgggagttcgccaacgag 21413959
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 ||||||| | |||||| || ||||||||||||||||||||||| ||||||||| ||||| Sbjct: 19331866 gcgcgacgtgctcccccaccacttcaagcacaacaacttctccagcttcgtccggcagct 19331807 Query: 63 caacaccta 71 ||||||||| Sbjct: 19331806 caacaccta 19331798 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 7463368 acttcaagcactccaacttctccagcttcgtccgccagctcaacacctacg 7463418 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||||||||||| |||||||||| ||| ||||||||||||||||||||| Sbjct: 17528097 ctacttcaagcacagcaacttctccagtttcatccgccagctcaacacctacg 17528149
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 73149 acttcaagcacaacaacttctccagcttcgtccgccagctcaacaccta 73101
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 ||||||| | |||||| || ||||||||||||||||||||||| ||||||||| ||||| Sbjct: 17357 gcgcgacgtgctcccccaccacttcaagcacaacaacttctccagcttcgtccggcagct 17298 Query: 63 caacaccta 71 ||||||||| Sbjct: 17297 caacaccta 17289
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 ||||||| | |||||| || ||||||||||||||||||||||| ||||||||| ||||| Sbjct: 99664 gcgcgacgtgctcccccaccacttcaagcacaacaacttctccagcttcgtccggcagct 99605 Query: 63 caacaccta 71 ||||||||| Sbjct: 99604 caacaccta 99596
>dbj|AK109590.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-C01, full insert sequence Length = 2217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 184 ctacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacg 236
>dbj|AK101934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073P11, full insert sequence Length = 1807 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 3 gcgcgacatcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagct 62 ||||||| | |||||| || ||||||||||||||||||||||| ||||||||| ||||| Sbjct: 389 gcgcgacgtgctcccccaccacttcaagcacaacaacttctccagcttcgtccggcagct 448 Query: 63 caacaccta 71 ||||||||| Sbjct: 449 caacaccta 457
>dbj|AK069579.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C13, full insert sequence Length = 2042 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 543 ctacttcaagcacagcaacttctccagcttcgtccgccagctcaacacctacg 595
>ref|NM_191549.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 79.8 bits (40), Expect = 8e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||| ||||||||||||| ||||||| || ||||||||| ||||||||||||| Sbjct: 188 tcctcccctcctacttcaagcaccgcaacttcgccagcttcgtccggcagctcaacacct 247 Query: 71 acgggttccggaaggtcgtgccggagcggtgggagttcgc 110 |||| ||||| ||||| | ||||| ||||||||||||| Sbjct: 248 acggattccgcaaggtggatccggacaggtgggagttcgc 287
>gb|AY344493.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF11 mRNA, complete cds Length = 985 Score = 79.8 bits (40), Expect = 8e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||| ||||||||||||| ||||||| || ||||||||| ||||||||||||| Sbjct: 260 tcctcccctcctacttcaagcaccgcaacttcgccagcttcgtccggcagctcaacacct 319 Query: 71 acgggttccggaaggtcgtgccggagcggtgggagttcgc 110 |||| ||||| ||||| | ||||| ||||||||||||| Sbjct: 320 acggattccgcaaggtggatccggacaggtgggagttcgc 359
>dbj|AK066316.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066G03, full insert sequence Length = 1102 Score = 79.8 bits (40), Expect = 8e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||| ||||||||||||| ||||||| || ||||||||| ||||||||||||| Sbjct: 340 tcctcccctcctacttcaagcaccgcaacttcgccagcttcgtccggcagctcaacacct 399 Query: 71 acgggttccggaaggtcgtgccggagcggtgggagttcgc 110 |||| ||||| ||||| | ||||| ||||||||||||| Sbjct: 400 acggattccgcaaggtggatccggacaggtgggagttcgc 439
>ref|NM_191220.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1323 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 13 ctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||| |||||||||||||||||||||||| |||||| || |||||||||||||| Sbjct: 154 ctccccaagtacttcaagcacaacaacttctccagcttcgtgcgacagctcaacaccta 212
>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence, complete sequence Length = 190834 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 15 ccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||| |||||||||| ||| ||||||||| |||||||||||||||||||||||||| Sbjct: 101269 ccccaagtacttcaagcgcaataacttctccagcttcgtccgccagctcaacacctacg 101327 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 gagaacgagcggctgcggcg 464 |||||||||||||||||||| Sbjct: 101746 gagaacgagcggctgcggcg 101765
>gb|AY344491.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF9 mRNA, complete cds Length = 1548 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 13 ctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||| |||||||||||||||||||||||| |||||| || |||||||||||||| Sbjct: 245 ctccccaagtacttcaagcacaacaacttctccagcttcgtgcgacagctcaacaccta 303
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 13 ctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||| |||||||||||||||||||||||| |||||| || |||||||||||||| Sbjct: 31364004 ctccccaagtacttcaagcacaacaacttctccagcttcgtgcgacagctcaacaccta 31364062 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 21935389 cttcaagcacgccaacttctcctccttcgttcgccagctcaacacctacg 21935438 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||| ||||||||||||| ||||||| || ||||||||| ||||||||||||| Sbjct: 30576081 tcctcccctcctacttcaagcaccgcaacttcgccagcttcgtccggcagctcaacacct 30576140 Query: 71 acg 73 ||| Sbjct: 30576141 acg 30576143 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||| || |||||||||| |||||||||| |||||| ||||| |||||||||| Sbjct: 24963814 tcctcccctgcttcttcaagcacggcaacttctccagcttcgttcgccaactcaacacct 24963873 Query: 71 acg 73 ||| Sbjct: 24963874 acg 24963876 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 gacgagaacgagcggctgcggcgc 465 |||||||||||||||| ||||||| Sbjct: 7524489 gacgagaacgagcggcggcggcgc 7524512 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cgacgtcgtcgtctccgcca 201 |||||||||||||||||||| Sbjct: 5016373 cgacgtcgtcgtctccgcca 5016354
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 13 ctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||| |||||||||||||||||||||||| |||||| || |||||||||||||| Sbjct: 118287 ctccccaagtacttcaagcacaacaacttctccagcttcgtgcgacagctcaacaccta 118345
>dbj|AK109856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-G05, full insert sequence Length = 1735 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 13 ctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||| |||||||||||||||||||||||| |||||| || |||||||||||||| Sbjct: 334 ctccccaagtacttcaagcacaacaacttctccagcttcgtgcgacagctcaacaccta 392
>ref|XM_475737.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1380 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacggg 75 ||||| |||||||||||||||||||||||| |||| || | ||||||||||||||||| Sbjct: 181 cccaagtacttcaagcacaacaacttctccagcttcatcaggcagctcaacacctacggt 240 Query: 76 ttccggaaggtcgtgccggagcggtgggagttcgccaacgag 117 ||||| || ||| || ||| | ||||||||||| |||||| Sbjct: 241 ttccgaaaaatcgatcctgagagatgggagttcgcaaacgag 282
>ref|XM_463332.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1236 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 360 cttcaagcacgccaacttctcctccttcgttcgccagctcaacacctacg 409
>gb|AY344492.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF10 mRNA, complete cds Length = 1634 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacggg 75 ||||| |||||||||||||||||||||||| |||| || | ||||||||||||||||| Sbjct: 247 cccaagtacttcaagcacaacaacttctccagcttcatcaggcagctcaacacctacggt 306 Query: 76 ttccggaaggtcgtgccggagcggtgggagttcgccaacgag 117 ||||| || ||| || ||| | ||||||||||| |||||| Sbjct: 307 ttccgaaaaatcgatcctgagagatgggagttcgcaaacgag 348
>gb|AC105729.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1607A12, complete sequence Length = 177327 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 104968 cttcaagcacaacaatttctccagcttcgtccgccagctcaacacctacg 104919
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 14235369 cttcaagcacaacaacttctccagcttcgtccggcagctcaacacctacg 14235320 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 gtcgtgccggagcggtgggagttcg 109 |||||||||||| |||||||||||| Sbjct: 15240769 gtcgtgccggagtggtgggagttcg 15240745
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 107442 cttcaagcacaacaacttctccagcttcgtccggcagctcaacacctacg 107393
>dbj|AP003308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1129G05 Length = 132535 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 17197 cttcaagcacgccaacttctcctccttcgttcgccagctcaacacctacg 17246
>dbj|AK100412.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087K12, full insert sequence Length = 1961 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacggg 75 ||||| |||||||||||||||||||||||| |||| || | ||||||||||||||||| Sbjct: 548 cccaagtacttcaagcacaacaacttctccagcttcatcaggcagctcaacacctacggt 607 Query: 76 ttccggaaggtcgtgccggagcggtgggagttcgccaacgag 117 ||||| || ||| || ||| | ||||||||||| |||||| Sbjct: 608 ttccgaaaaatcgatcctgagagatgggagttcgcaaacgag 649
>dbj|AK066844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088J01, full insert sequence Length = 2272 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 295 cttcaagcacaacaatttctccagcttcgtccgccagctcaacacctacg 344
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 14243611 cttcaagcacaacaacttctccagcttcgtccggcagctcaacacctacg 14243562 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 gtcgtgccggagcggtgggagttcg 109 |||||||||||| |||||||||||| Sbjct: 15249010 gtcgtgccggagtggtgggagttcg 15248986
>dbj|AB050098.1| Oryza sativa spl7 mRNA for spl7 protein, complete cds Length = 1983 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacggg 75 ||||| |||||||||||||||||||||||| |||| || | ||||||||||||||||| Sbjct: 538 cccaagtacttcaagcacaacaacttctccagcttcatcaggcagctcaacacctacggt 597 Query: 76 ttccggaaggtcgtgccggagcggtgggagttcgccaacgag 117 ||||| || ||| || ||| | ||||||||||| |||||| Sbjct: 598 ttccgaaaaatcgatcctgagagatgggagttcgcaaacgag 639
>dbj|AB050096.1| Oryza sativa (japonica cultivar-group) Spl7 mRNA for heat stress transcription factor Spl7, complete cds Length = 1983 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacggg 75 ||||| |||||||||||||||||||||||| |||| || | ||||||||||||||||| Sbjct: 538 cccaagtacttcaagcacaacaacttctccagcttcatcaggcagctcaacacctacggt 597 Query: 76 ttccggaaggtcgtgccggagcggtgggagttcgccaacgag 117 ||||| || ||| || ||| | ||||||||||| |||||| Sbjct: 598 ttccgaaaaatcgatcctgagagatgggagttcgcaaacgag 639
>ref|NM_187764.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1140 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctac 72 ||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 240 cttcaagcacaacaatttctccagcttcgtccgccagctcaacacctac 288
>gb|AY344489.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF7 mRNA, complete cds Length = 1403 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctac 72 ||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 316 cttcaagcacaacaatttctccagcttcgtccgccagctcaacacctac 364
>dbj|AK072391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077L03, full insert sequence Length = 2561 Score = 73.8 bits (37), Expect = 5e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctac 72 |||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 636 cttcaagcacaacaacttctccagcttcgtccggcagctcaacacctac 684
>dbj|AK068660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162K14, full insert sequence Length = 1994 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccgg 81 |||||||||||||||||||||||| ||||||||| |||||||| ||||| || ||| || Sbjct: 863 tacttcaagcacaacaacttctccagcttcgtccggcagctcaatacctatggcttcagg 922 Query: 82 aaggt 86 ||||| Sbjct: 923 aaggt 927
>ref|XM_506806.1| PREDICTED Oryza sativa (japonica cultivar-group), P0040H05.33 mRNA Length = 1846 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccg 80 |||||||||||||| |||||||||| ||| |||||||||||||||||||||| ||||| Sbjct: 271 ctacttcaagcacagcaacttctccagtttcatccgccagctcaacacctacggattccg 330
>ref|XM_465799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1713 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccg 80 |||||||||||||| |||||||||| ||| |||||||||||||||||||||| ||||| Sbjct: 287 ctacttcaagcacagcaacttctccagtttcatccgccagctcaacacctacggattccg 346
>dbj|AK072210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013165J23, full insert sequence Length = 1846 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccg 80 |||||||||||||| |||||||||| ||| |||||||||||||||||||||| ||||| Sbjct: 271 ctacttcaagcacagcaacttctccagtttcatccgccagctcaacacctacggattccg 330
>dbj|AK069479.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019J23, full insert sequence Length = 1573 Score = 71.9 bits (36), Expect = 2e-09 Identities = 84/100 (84%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||| || |||||||||| |||||||||| |||||| ||||| |||||||||| Sbjct: 308 tcctcccctgcttcttcaagcacggcaacttctccagcttcgttcgccaactcaacacct 367 Query: 71 acgggttccggaaggtcgtgccggagcggtgggagttcgc 110 |||| ||||||||||| || || |||||||||||||| Sbjct: 368 acggattccggaaggttcaccctgaccggtgggagttcgc 407
>dbj|AK065643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035J03, full insert sequence Length = 1714 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccg 80 |||||||||||||| |||||||||| ||| |||||||||||||||||||||| ||||| Sbjct: 287 ctacttcaagcacagcaacttctccagtttcatccgccagctcaacacctacggattccg 346
>emb|Z46956.1|GMHSF5 G.max mRNA for heat shock transcription factor 5 Length = 1203 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 13 ctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 ||||||||||| ||||| ||||||||||||||| |||||| ||||| ||||||||||| Sbjct: 235 ctccccaactatttcaaacacaacaacttctccagcttcgttcgccaactcaacaccta 293
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 57074 acttcaagcactccaacttctccagcttcgtccgccagctcaacacctacg 57124
>emb|Z46954.1|GMHSF33 G.max mRNA for heat shock transcription factor 33 Length = 1207 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccgg 81 |||||||| ||||||||||| ||| |||||||| || || |||||||| ||||||||| Sbjct: 58 tacttcaaacacaacaacttttccagtttcgtccgtcaacttaacacctatgggttccgg 117 Query: 82 aaggtcgtgccggagcggtgggagttcgccaacga 116 ||||| || || || || ||||| ||||||||||| Sbjct: 118 aaggttgtccctgaccgttgggaattcgccaacga 152
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||||||||||||||| ||||||||| |||||||| ||||| Sbjct: 76761 tacttcaagcacaacaacttctccagcttcgtccggcagctcaataccta 76712
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||| |||||||||||||||||||||||| |||| || | |||||||||||||||| Sbjct: 55758 cccaagtacttcaagcacaacaacttctccagcttcatcaggcagctcaacacctacg 55815
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||| |||||||||||||||||||||||| |||| || | |||||||||||||||| Sbjct: 26138418 cccaagtacttcaagcacaacaacttctccagcttcatcaggcagctcaacacctacg 26138475
>dbj|AB050097.1| Oryza sativa spl7 gene for spl7 protein, complete cds Length = 5579 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||| |||||||||||||||||||||||| |||| || | |||||||||||||||| Sbjct: 3891 cccaagtacttcaagcacaacaacttctccagcttcatcaggcagctcaacacctacg 3948
>dbj|AB050095.1| Oryza sativa (japonica cultivar-group) Spl7 gene for heat stress transcription factor Spl7, complete cds Length = 5579 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||| |||||||||||||||||||||||| |||| || | |||||||||||||||| Sbjct: 3891 cccaagtacttcaagcacaacaacttctccagcttcatcaggcagctcaacacctacg 3948
>emb|AJ628154.1| Ononis spinosa subsp. procurrens microsatellite DNA, clone di3 Length = 518 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 ||||||| || |||||||| ||||||||||||||| |||||| ||||| |||||||||| Sbjct: 165 tcctccctaattacttcaaacacaacaacttctccagcttcgttcgccaactcaacacct 106 Query: 71 a 71 | Sbjct: 105 a 105
>emb|X82943.1|ZMHSFB Z.mays mRNA for heat shock factor Length = 2048 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 13 ctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctac 72 |||||||| |||||||||||||||||||||||| |||||| || || || ||||||||| Sbjct: 321 ctccccaagtacttcaagcacaacaacttctccagcttcgtgcggcaactgaacacctac 380 Query: 73 g 73 | Sbjct: 381 g 381
>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0040H05 Length = 172623 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 21 ctacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 |||||||||||||| |||||||||| ||| ||||||||||||||||||||| Sbjct: 140094 ctacttcaagcacagcaacttctccagtttcatccgccagctcaacacctacg 140146
>gb|AY110852.1| Zea mays CL2307_1 mRNA sequence Length = 2364 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 13 ctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctac 72 |||||||| |||||||||||||||||||||||| |||||| || || || ||||||||| Sbjct: 321 ctccccaagtacttcaagcacaacaacttctccagcttcgtgcggcaactgaacacctac 380 Query: 73 g 73 | Sbjct: 381 g 381
>ref|XM_476842.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1956 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 787 cttcaagcacaacaacttctccagcttcgtcaggcagctcaacaccta 834
>gb|AY344487.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF5 mRNA, complete cds Length = 1268 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 362 cttcaagcacaacaacttctccagcttcgtcaggcagctcaacaccta 409
>gb|AY323488.1| Oryza sativa (japonica cultivar-group) heat stress protein (HS1) mRNA, complete cds Length = 1310 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 385 cttcaagcacaacaacttctccagcttcgtcaggcagctcaacaccta 432
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 55718 cttcaagcacaacaacttctccagcttcgtcaggcagctcaacaccta 55765
>dbj|AK101824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067M16, full insert sequence Length = 1955 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||||||||||||| ||||||| | |||||||||||||| Sbjct: 786 cttcaagcacaacaacttctccagcttcgtcaggcagctcaacaccta 833
>emb|Z46951.1|GMHSF29 G.max mRNA for heat shock transcription factor 29 Length = 1386 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccgg 81 |||||||| |||||||||| ||| |||||||| ||||| |||||||| || |||||| Sbjct: 28 tacttcaaacacaacaactattccagtttcgtccgtcagcttaacacctatggtttccgg 87 Query: 82 aaggtcgtgccggagcggtgggagttcgccaacga 116 ||||| || || || || ||||| ||||||||||| Sbjct: 88 aaggttgtccctgaccgttgggaattcgccaacga 122
>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0036G09 Length = 124118 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||| ||||||||||||| ||||||| || ||||||||| ||||||||||||| Sbjct: 58685 tcctcccctcctacttcaagcaccgcaacttcgccagcttcgtccggcagctcaacacct 58744 Query: 71 acg 73 ||| Sbjct: 58745 acg 58747
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||| ||||||||||||| ||||||| || ||||||||| ||||||||||||| Sbjct: 18358 tcctcccctcctacttcaagcaccgcaacttcgccagcttcgtccggcagctcaacacct 18417 Query: 71 acg 73 ||| Sbjct: 18418 acg 18420
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacg 73 ||||||||||| |||||||||| |||| ||||||||||||||||||||| Sbjct: 48243 acttcaagcacgccaacttctccagcttcctccgccagctcaacacctacg 48293 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 ggtgggagttcgccaacgag 117 |||||||||||||||||||| Sbjct: 48440 ggtgggagttcgccaacgag 48459
>ref|XM_532354.2| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 1 (LOC475124), mRNA Length = 2028 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccgg 81 |||||||||||||||||| | || |||||| ||||||||||||| ||||| |||||| Sbjct: 291 tacttcaagcacaacaacatggccagcttcgtgcgccagctcaacatgtacggcttccgg 350 Query: 82 aaggtcgtgc 91 ||||| |||| Sbjct: 351 aaggtggtgc 360
>ref|XM_852884.1| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 7 (LOC475124), mRNA Length = 1881 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccgg 81 |||||||||||||||||| | || |||||| ||||||||||||| ||||| |||||| Sbjct: 291 tacttcaagcacaacaacatggccagcttcgtgcgccagctcaacatgtacggcttccgg 350 Query: 82 aaggtcgtgc 91 ||||| |||| Sbjct: 351 aaggtggtgc 360
>ref|XM_852840.1| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 6 (LOC475124), mRNA Length = 1854 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccgg 81 |||||||||||||||||| | || |||||| ||||||||||||| ||||| |||||| Sbjct: 291 tacttcaagcacaacaacatggccagcttcgtgcgccagctcaacatgtacggcttccgg 350 Query: 82 aaggtcgtgc 91 ||||| |||| Sbjct: 351 aaggtggtgc 360
>ref|XM_844010.1| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 2 (LOC475124), mRNA Length = 1917 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccgg 81 |||||||||||||||||| | || |||||| ||||||||||||| ||||| |||||| Sbjct: 291 tacttcaagcacaacaacatggccagcttcgtgcgccagctcaacatgtacggcttccgg 350 Query: 82 aaggtcgtgc 91 ||||| |||| Sbjct: 351 aaggtggtgc 360
>ref|XM_852764.1| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 5 (LOC475124), mRNA Length = 2010 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccgg 81 |||||||||||||||||| | || |||||| ||||||||||||| ||||| |||||| Sbjct: 291 tacttcaagcacaacaacatggccagcttcgtgcgccagctcaacatgtacggcttccgg 350 Query: 82 aaggtcgtgc 91 ||||| |||| Sbjct: 351 aaggtggtgc 360
>ref|XM_852686.1| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 3 (LOC475124), mRNA Length = 1947 Score = 60.0 bits (30), Expect = 7e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccgg 81 |||||||||||||||||| | || |||||| ||||||||||||| ||||| |||||| Sbjct: 291 tacttcaagcacaacaacatggccagcttcgtgcgccagctcaacatgtacggcttccgg 350 Query: 82 aaggtcgtgc 91 ||||| |||| Sbjct: 351 aaggtggtgc 360
>gb|AY458843.1| Glycine max heat shock factor protein hsf8-related mRNA, complete cds Length = 1781 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgg 74 ||||||||||||||||||||||| |||||| ||||| | ||||||||||| Sbjct: 359 acttcaagcacaacaacttctccagcttcgttcgccaattaaacacctacgg 410
>ref|NM_192883.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1047 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||| || |||||||||| |||||||||| |||||| ||||| |||||||||| Sbjct: 194 tcctcccctgcttcttcaagcacggcaacttctccagcttcgttcgccaactcaacacct 253 Query: 71 acg 73 ||| Sbjct: 254 acg 256
>gb|AY344495.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF13 mRNA, complete cds Length = 1208 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||| || |||||||||| |||||||||| |||||| ||||| |||||||||| Sbjct: 255 tcctcccctgcttcttcaagcacggcaacttctccagcttcgttcgccaactcaacacct 314 Query: 71 acg 73 ||| Sbjct: 315 acg 317
>dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0006C01 Length = 153865 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 11 tcctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacct 70 |||||||| || |||||||||| |||||||||| |||||| ||||| |||||||||| Sbjct: 36337 tcctcccctgcttcttcaagcacggcaacttctccagcttcgttcgccaactcaacacct 36396 Query: 71 acg 73 ||| Sbjct: 36397 acg 36399
>ref|NM_113182.1| Arabidopsis thaliana AT-HSFA6B; DNA binding / transcription factor AT3G22830 (AT-HSFA6B) mRNA, complete cds Length = 1538 Score = 50.1 bits (25), Expect = 0.007 Identities = 76/93 (81%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccggaa 83 |||||||||||| ||||||||| || ||||||||||||||||| || || ||| | || Sbjct: 473 cttcaagcacaataacttctccagttttgtccgccagctcaacacatatggtttcagaaa 532 Query: 84 ggtcgtgccggagcggtgggagttcgccaacga 116 ||| ||||| ||||||||||| || ||||| Sbjct: 533 ggtgaatccggatcggtgggagtttgcaaacga 565
>gb|AY079374.1| Arabidopsis thaliana putative heat shock protein (At3g22830) mRNA, complete cds Length = 1252 Score = 50.1 bits (25), Expect = 0.007 Identities = 76/93 (81%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccggaa 83 |||||||||||| ||||||||| || ||||||||||||||||| || || ||| | || Sbjct: 312 cttcaagcacaataacttctccagttttgtccgccagctcaacacatatggtttcagaaa 371 Query: 84 ggtcgtgccggagcggtgggagttcgccaacga 116 ||| ||||| ||||||||||| || ||||| Sbjct: 372 ggtgaatccggatcggtgggagtttgcaaacga 404
>gb|AY045974.1| Arabidopsis thaliana putative heat shock protein (At3g22830) mRNA, complete cds Length = 1554 Score = 50.1 bits (25), Expect = 0.007 Identities = 76/93 (81%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccggaa 83 |||||||||||| ||||||||| || ||||||||||||||||| || || ||| | || Sbjct: 473 cttcaagcacaataacttctccagttttgtccgccagctcaacacatatggtttcagaaa 532 Query: 84 ggtcgtgccggagcggtgggagttcgccaacga 116 ||| ||||| ||||||||||| || ||||| Sbjct: 533 ggtgaatccggatcggtgggagtttgcaaacga 565
>dbj|AB022223.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MWI23 Length = 77273 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 24 cttcaagcacaacaacttctcctccttcgtccgccagctcaacac 68 |||||||||||| ||||||||| || ||||||||||||||||| Sbjct: 68506 cttcaagcacaataacttctccagttttgtccgccagctcaacac 68550
>ref|NM_116200.1| Arabidopsis thaliana AT-HSFA7B; DNA binding / transcription factor AT3G63350 (AT-HSFA7B) mRNA, complete cds Length = 849 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcc 45 |||||||||||||||||||||||| Sbjct: 211 tacttcaagcacaacaacttctcc 234
>gb|DQ446784.1| Arabidopsis thaliana clone pENTR221-At3g63350 heat shock transcription factor family protein (At3g63350) mRNA, complete cds Length = 849 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcc 45 |||||||||||||||||||||||| Sbjct: 211 tacttcaagcacaacaacttctcc 234
>emb|Z46953.1|GMHSF34 G.max mRNA for heat shock transcription factor 34 Length = 1410 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 25 ttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggttccg 80 ||||||||||||||||||||| ||| || || |||||||| ||||| || ||||| Sbjct: 456 ttcaagcacaacaacttctccagctttgttcgacagctcaatacctatggattccg 511
>emb|X55347.1|LPHSF24 Tomato mRNA for heat stress transcription factor HSF24 Length = 1530 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 ||||| |||||||||||||| || |||||| |||||| || ||||| |||||||| Sbjct: 475 cccaaatacttcaagcacaataatttctccagcttcgttcgacagcttaacaccta 530
>emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1 clone MAA21 (ESSA project) Length = 79153 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcc 45 |||||||||||||||||||||||| Sbjct: 21978 tacttcaagcacaacaacttctcc 22001
>emb|AL138648.2|ATF16M2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16M2 Length = 75106 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcc 45 |||||||||||||||||||||||| Sbjct: 67361 tacttcaagcacaacaacttctcc 67384
>ref|NM_121688.2| Arabidopsis thaliana HSF3 (HEAT SHOCK FACTOR 3); DNA binding / transcription factor AT5G16820 (HSF3) transcript variant AT5G16820.1 mRNA, complete cds Length = 1776 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtc 54 ||||| || ||||||||||||||||||||| ||||||| Sbjct: 318 cccaagtatttcaagcacaacaacttctccagcttcgtc 356
>ref|NM_180501.1| Arabidopsis thaliana HSF3 (HEAT SHOCK FACTOR 3); DNA binding / transcription factor AT5G16820 (HSF3) transcript variant AT5G16820.2 mRNA, complete cds Length = 1786 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtc 54 ||||| || ||||||||||||||||||||| ||||||| Sbjct: 318 cccaagtatttcaagcacaacaacttctccagcttcgtc 356
>ref|XM_360699.1| Magnaporthe grisea 70-15 hypothetical protein (MG03242.4) partial mRNA Length = 2427 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 25 ttcaagcacaacaacttctcctccttcgtccgccagctcaaca 67 |||||||||||||||| | |||| |||||| | |||||||||| Sbjct: 631 ttcaagcacaacaactacgcctcgttcgtcaggcagctcaaca 673
>ref|XM_418467.1| PREDICTED: Gallus gallus similar to HEAT SHOCK FACTOR PROTEIN 1 (HSF 1) (HEAT SHOCK TRANSCRIPTION FACTOR 1) (HSTF 1) (HSF 3A) (HSTF 3A) (LOC420362), partial mRNA Length = 371 Score = 46.1 bits (23), Expect = 0.11 Identities = 65/79 (82%) Strand = Plus / Plus Query: 13 ctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctac 72 ||||| || |||||||||||||||||| | || |||||| || |||||||||| || Sbjct: 52 ctcccaaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaacatgtat 111 Query: 73 gggttccggaaggtcgtgc 91 || ||||||||||| |||| Sbjct: 112 ggcttccggaaggtggtgc 130
>gb|AC146585.18| Medicago truncatula clone mth2-68o3, complete sequence Length = 124526 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 25 ttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||||| |||||| |||| |||| |||||||| ||||| Sbjct: 23199 ttcaagcacaacaatttctccagcttcatccgtcagctcaataccta 23153
>emb|Y14068.1|ATHSF3 Arabidopsis thaliana mRNA for heat shock factor 3 Length = 1791 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtc 54 ||||| || ||||||||||||||||||||| ||||||| Sbjct: 319 cccaagtatttcaagcacaacaacttctccagcttcgtc 357
>emb|AL391147.1|ATF5E19 Arabidopsis thaliana DNA chromosome 5, BAC clone F5E19 (ESSA project) Length = 77976 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtc 54 ||||| || ||||||||||||||||||||| ||||||| Sbjct: 64717 cccaagtatttcaagcacaacaacttctccagcttcgtc 64755
>gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1) gene, complete cds Length = 99431 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 25 ttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||||| |||||| |||| |||| |||||||| ||||| Sbjct: 38033 ttcaagcacaacaatttctccagcttcatccgtcagctcaataccta 38079
>emb|BX829666.1|CNS0A1QC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1796 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtc 54 ||||| || ||||||||||||||||||||| ||||||| Sbjct: 351 cccaagtatttcaagcacaacaacttctccagcttcgtc 389
>gb|AY136633.1| Synthetic construct HSF3 DNA-binding domain/VP16 activation domain fusion protein mRNA, complete cds Length = 1236 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcctccttcgtc 54 ||||| || ||||||||||||||||||||| ||||||| Sbjct: 202 cccaagtatttcaagcacaacaacttctccagcttcgtc 240
>dbj|AP006429.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17D07, TM0322, complete sequence Length = 109570 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 22 tacttcaagcacaacaacttctc 44 ||||||||||||||||||||||| Sbjct: 60555 tacttcaagcacaacaacttctc 60533
>gb|L06098.1|CHKHSF3A Chicken mRNA sequence Length = 1774 Score = 46.1 bits (23), Expect = 0.11 Identities = 65/79 (82%) Strand = Plus / Plus Query: 13 ctccccaactacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctac 72 ||||| || |||||||||||||||||| | || |||||| || |||||||||| || Sbjct: 214 ctcccaaagtacttcaagcacaacaacatggccagcttcgtgcggcagctcaacatgtat 273 Query: 73 gggttccggaaggtcgtgc 91 || ||||||||||| |||| Sbjct: 274 ggcttccggaaggtggtgc 292
>dbj|AB014483.1| Nicotiana tabacum NtHSF1 mRNA for heat shock factor, complete cds Length = 1625 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacac 68 ||||||||||||||||| |||||| |||||| || ||||| ||||| Sbjct: 607 tacttcaagcacaacaatttctccagcttcgttcgtcagcttaacac 653
>ref|NM_124786.3| Arabidopsis thaliana AT-HSFA9; DNA binding / transcription factor AT5G54070 (AT-HSFA9) mRNA, complete cds Length = 1258 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcc 45 ||||| |||||||||||||| ||||||||| Sbjct: 369 cccaaatacttcaagcacaagaacttctcc 398
>ref|XM_852727.1| PREDICTED: Canis familiaris similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 4 (LOC475124), mRNA Length = 565 Score = 44.1 bits (22), Expect = 0.43 Identities = 40/46 (86%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaaca 67 |||||||||||||||||| | || |||||| ||||||||||||| Sbjct: 304 tacttcaagcacaacaacatggccagcttcgtgcgccagctcaaca 349
>gb|AY096552.1| Arabidopsis thaliana unknown protein (At5g54070) mRNA, complete cds Length = 1027 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcc 45 ||||| |||||||||||||| ||||||||| Sbjct: 334 cccaaatacttcaagcacaagaacttctcc 363
>gb|AY065226.1| Arabidopsis thaliana unknown protein (At5g54070) mRNA, complete cds Length = 1274 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcc 45 ||||| |||||||||||||| ||||||||| Sbjct: 368 cccaaatacttcaagcacaagaacttctcc 397
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 429 ggcggtgctgatggacgagaac 450 |||||||||||||||||||||| Sbjct: 29423 ggcggtgctgatggacgagaac 29444
>gb|U75363.1|RPU75363 Rhodopseudomonas palustris cyclohex-1-ene-1-carboxyl-CoA hydratase (badk), cyclohex-1-ene-1-carboxylate CoA ligase (aliA), cyclohexanecarboxyl-CoA dehydrogenase (badJ), 2-ketocyclohexanecarboxyl-CoA hydrolase (badI), putative 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase (badH), putative regulatory protein (badR), putative NADPH:quinone oxidoreductase (badC), and benzoyl-CoA reductase subunits (badD), (badE), (badF) and (badG) genes, complete cds Length = 12058 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 429 ggcggtgctgatggacgagaac 450 |||||||||||||||||||||| Sbjct: 9765 ggcggtgctgatggacgagaac 9786
>dbj|AB018115.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJP23 Length = 31827 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaacttctcc 45 ||||| |||||||||||||| ||||||||| Sbjct: 10249 cccaaatacttcaagcacaagaacttctcc 10278
>ref|NM_111169.3| Arabidopsis thaliana ATHSFA1E; DNA binding / transcription factor AT3G02990 (ATHSFA1E) mRNA, complete cds Length = 1857 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 25 ttcaagcacaacaacttctcctccttcgtccgccagctcaa 65 |||||||||||||| |||||| ||||||| | |||||||| Sbjct: 334 ttcaagcacaacaatttctccagcttcgtcagacagctcaa 374
>ref|NM_187598.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1221 Score = 42.1 bits (21), Expect = 1.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||| ||| ||| || |||| | ||||||||||||||||| Sbjct: 275 acttcaagcacagcaatttcaccagcttcatacgccagctcaacaccta 323
>ref|NM_196687.1| Oryza sativa (japonica cultivar-group) putative expansin (OSJNBb0016G17.16), mRNA Length = 768 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 gtcgtgccggagcggtgggagttcg 109 |||||||||||| |||||||||||| Sbjct: 706 gtcgtgccggagtggtgggagttcg 730
>gb|CP000114.1| Streptococcus agalactiae A909, complete genome Length = 2127839 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ccagcgcggcggtgctgatgg 442 ||||||||||||||||||||| Sbjct: 581501 ccagcgcggcggtgctgatgg 581521
>gb|AC159879.2| Mus musculus BAC clone RP24-497H22 from chromosome 12, complete sequence Length = 201836 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gcaagggggagaagcagctgc 145 ||||||||||||||||||||| Sbjct: 128087 gcaagggggagaagcagctgc 128107
>gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC F13E7 genomic sequence, complete sequence Length = 100559 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Minus Query: 25 ttcaagcacaacaacttctcctccttcgtccgccagctcaa 65 |||||||||||||| |||||| ||||||| | |||||||| Sbjct: 12499 ttcaagcacaacaatttctccagcttcgtcagacagctcaa 12459
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02, complete sequence Length = 162425 Score = 42.1 bits (21), Expect = 1.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||| ||| ||| || |||| | ||||||||||||||||| Sbjct: 49054 acttcaagcacagcaatttcaccagcttcatacgccagctcaacaccta 49102
>gb|AY392034.1| Mus musculus microtubule-associated protein 1 light chain 3 copy 7 (Map1lc3) pseudogene, complete sequence Length = 590 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gcaagggggagaagcagctgc 145 ||||||||||||||||||||| Sbjct: 126 gcaagggggagaagcagctgc 146
>gb|AY344490.1| Oryza sativa (japonica cultivar-group) heat shock factor RHSF8 mRNA, complete cds Length = 1441 Score = 42.1 bits (21), Expect = 1.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||| ||| ||| || |||| | ||||||||||||||||| Sbjct: 375 acttcaagcacagcaatttcaccagcttcatacgccagctcaacaccta 423
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 ccagcgcggcggtgctgatgg 442 ||||||||||||||||||||| Sbjct: 18249 ccagcgcggcggtgctgatgg 18229
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 ccagcgcggcggtgctgatgg 442 ||||||||||||||||||||| Sbjct: 261723 ccagcgcggcggtgctgatgg 261703
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 gagaacgagcggctgcggcgc 465 ||||||||||||||||||||| Sbjct: 15781 gagaacgagcggctgcggcgc 15801
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 gagaacgagcggctgcggcgc 465 ||||||||||||||||||||| Sbjct: 100409 gagaacgagcggctgcggcgc 100429
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 gtcgtgccggagcggtgggagttcg 109 |||||||||||| |||||||||||| Sbjct: 94468 gtcgtgccggagtggtgggagttcg 94444
>gb|DQ061067.1| Oryza sativa (japonica cultivar-group) alpha-expansin 28 (EXPA28) mRNA, partial cds Length = 737 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 gtcgtgccggagcggtgggagttcg 109 |||||||||||| |||||||||||| Sbjct: 695 gtcgtgccggagtggtgggagttcg 719
>ref|NG_005252.1| Mus musculus microtubule-associated protein 1 light chain 3 pseudogene 7 (Map1lc3-ps7) on chromosome 12 Length = 590 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 gcaagggggagaagcagctgc 145 ||||||||||||||||||||| Sbjct: 126 gcaagggggagaagcagctgc 146
>emb|BX824101.1|CNS0A5QF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH22ZB07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1691 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 25 ttcaagcacaacaacttctcctccttcgtccgccagctcaa 65 |||||||||||||| |||||| ||||||| | |||||||| Sbjct: 341 ttcaagcacaacaatttctccagcttcgtcagacagctcaa 381
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 gtcgcccatcaccaccagcag 270 ||||||||||||||||||||| Sbjct: 4555863 gtcgcccatcaccaccagcag 4555843 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 411 cggccgcgcgaccagcgcggcggtg 435 |||||||||| |||||||||||||| Sbjct: 1974287 cggccgcgcggccagcgcggcggtg 1974311
>dbj|AK072571.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131M03, full insert sequence Length = 1705 Score = 42.1 bits (21), Expect = 1.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 23 acttcaagcacaacaacttctcctccttcgtccgccagctcaacaccta 71 |||||||||||| ||| ||| || |||| | ||||||||||||||||| Sbjct: 441 acttcaagcacagcaatttcaccagcttcatacgccagctcaacaccta 489
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 tcgccaacgagttcttccgca 127 ||||||||||||||||||||| Sbjct: 2038565 tcgccaacgagttcttccgca 2038585
>gb|M74142.1|RABGLOBIN Rabbit zeta-1 globin (zeta-1) pseudogene, alpha-globin (alpha) gene, and theta-1 globin (theta-1) pseudogene Length = 10621 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 cgctcggcggccccgccgcgc 388 ||||||||||||||||||||| Sbjct: 6556 cgctcggcggccccgccgcgc 6536
>gb|BC049357.1| Mus musculus cDNA clone MGC:56979 IMAGE:6395358, complete cds Length = 2523 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ggcggccccgccgcgccctc 392 |||||||||||||||||||| Sbjct: 677 ggcggccccgccgcgccctc 658
>ref|NM_188669.1| Oryza sativa (japonica cultivar-group), Ozsa8272 predicted mRNA Length = 1242 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 442 gacgagaacgagcggctgcggcgc 465 |||||||||||||||| ||||||| Sbjct: 994 gacgagaacgagcggcggcggcgc 971
>ref|NM_189691.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1164 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cgacgtcgtcgtctccgcca 201 |||||||||||||||||||| Sbjct: 880 cgacgtcgtcgtctccgcca 861
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 gcacttcccgctgttccacc 238 |||||||||||||||||||| Sbjct: 2270068 gcacttcccgctgttccacc 2270087
>ref|XM_511908.1| PREDICTED: Pan troglodytes similar to Heat shock transcription factor, Y-linked (Heat shock transcription factor 2-like protein) (HSF2-like) (LOC455156), mRNA Length = 815 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 48 cttcgtccgccagctcaacacctacgggttccggaaggtcgtgc 91 |||| |||||||||||||| |||||| ||||| ||||| |||| Sbjct: 368 cttcatccgccagctcaacctctacggcttccgcaaggtggtgc 411
>ref|XM_510880.1| PREDICTED: Pan troglodytes similar to endoplasmic reticulum (ER) to nucleus signalling 2; inositol-requiring 1 (Yeast homologue); inositol-requiring 1 (yeast); inositol-requiring 1 beta (yeast) (LOC453992), mRNA Length = 954 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 ggccccgccgcgccctcgcc 395 |||||||||||||||||||| Sbjct: 184 ggccccgccgcgccctcgcc 165
>ref|XM_528266.1| PREDICTED: Pan troglodytes similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1) (LOC472896), mRNA Length = 2496 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaac 39 ||||| |||||||||||||||||| Sbjct: 1147 cccaagtacttcaagcacaacaac 1170
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cgtcgcccatcaccaccagc 268 |||||||||||||||||||| Sbjct: 4130076 cgtcgcccatcaccaccagc 4130057
>gb|AC154528.2| Mus musculus BAC clone RP23-460I18 from chromosome 14, complete sequence Length = 207430 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 112575 caagggggagaagcagctgc 112594
>gb|AC091263.15| Mus musculus chromosome 9, clone RP23-134F1, complete sequence Length = 204289 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ggcggccccgccgcgccctc 392 |||||||||||||||||||| Sbjct: 58801 ggcggccccgccgcgccctc 58782
>ref|NM_005526.1| Homo sapiens heat shock transcription factor 1 (HSF1), mRNA Length = 2156 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaac 39 ||||| |||||||||||||||||| Sbjct: 332 cccaagtacttcaagcacaacaac 355
>gb|BC068180.1| Mus musculus microtubule-associated protein 1 light chain 3 beta, mRNA (cDNA clone MGC:92968 IMAGE:30634082), complete cds Length = 1742 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 174 caagggggagaagcagctgc 193
>gb|BC013716.1| Mus musculus heat shock factor 1, mRNA (cDNA clone MGC:18620 IMAGE:3978881), complete cds Length = 2032 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaac 39 ||||| |||||||||||||||||| Sbjct: 328 cccaagtacttcaagcacaacaac 351
>ref|XM_954389.1| Neurospora crassa OR74A hypothetical protein (NCU02319.1) partial mRNA Length = 3180 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagc 31 ||||||||||||||| || ||||||||| Sbjct: 535 cgcgacatcctccccgacaacttcaagc 562
>gb|BC014638.1| Homo sapiens heat shock transcription factor 1, mRNA (cDNA clone MGC:1407 IMAGE:3528599), complete cds Length = 2186 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaac 39 ||||| |||||||||||||||||| Sbjct: 313 cccaagtacttcaagcacaacaac 336
>gb|BC058683.1| Mus musculus RIKEN cDNA B230380D07 gene, mRNA (cDNA clone MGC:76380 IMAGE:6834871), complete cds Length = 2502 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ggcggccccgccgcgccctc 392 |||||||||||||||||||| Sbjct: 658 ggcggccccgccgcgccctc 639
>gb|BC055816.1| Mus musculus RIKEN cDNA B230380D07 gene, mRNA (cDNA clone IMAGE:4019591), partial cds Length = 2270 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ggcggccccgccgcgccctc 392 |||||||||||||||||||| Sbjct: 428 ggcggccccgccgcgccctc 409
>ref|XM_331094.1| Neurospora crassa OR74A hypothetical protein (NCU02319.1) partial mRNA Length = 3180 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 cgcgacatcctccccaactacttcaagc 31 ||||||||||||||| || ||||||||| Sbjct: 535 cgcgacatcctccccgacaacttcaagc 562
>ref|NM_008296.1| Mus musculus heat shock factor 1 (Hsf1), mRNA Length = 2032 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaac 39 ||||| |||||||||||||||||| Sbjct: 328 cccaagtacttcaagcacaacaac 351
>ref|NM_026160.1| Mus musculus microtubule-associated protein 1 light chain 3 beta (Map1lc3b), mRNA Length = 1711 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 172 caagggggagaagcagctgc 191
>gb|BC069845.1| Mus musculus RIKEN cDNA B230380D07 gene, mRNA (cDNA clone IMAGE:3156136), partial cds Length = 1691 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ggcggccccgccgcgccctc 392 |||||||||||||||||||| Sbjct: 413 ggcggccccgccgcgccctc 394
>ref|XM_001006710.1| PREDICTED: Mus musculus similar to microtubule-associated protein 1 light chain 3 beta (LOC673946), mRNA Length = 675 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 165 caagggggagaagcagctgc 184
>gb|AC157566.6| Mus musculus chromosome 15, clone RP23-415D19, complete sequence Length = 196738 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cccaactacttcaagcacaacaac 39 ||||| |||||||||||||||||| Sbjct: 140363 cccaagtacttcaagcacaacaac 140340
>ref|XM_914515.2| PREDICTED: Mus musculus gene model 739, (NCBI) (Gm739), mRNA Length = 3456 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 48 cttcgtccgccagctcaacacctacgggttccggaaggtcgtgc 91 |||| |||||||||||||| |||||| ||||| ||||| |||| Sbjct: 477 cttcatccgccagctcaacctctacggcttccgcaaggtggtgc 520
>emb|AM075208.1| Enterobacter sakazakii partial genome, BAC clone 10 C 10 Length = 86823 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 gcgcgaccagcgcggcggtg 435 |||||||||||||||||||| Sbjct: 61848 gcgcgaccagcgcggcggtg 61867
>ref|XM_847376.1| PREDICTED: Canis familiaris similar to heat shock factor 2 (LOC610000), mRNA Length = 1971 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 48 cttcgtccgccagctcaacacctacgggttccggaaggtcgtgc 91 |||| |||||||||||||| |||||| ||||| ||||| |||| Sbjct: 279 cttcatccgccagctcaacctctacggcttccgcaaggtggtgc 322
>ref|XM_540457.2| PREDICTED: Canis familiaris similar to SEC14-like protein 1, transcript variant 1 (LOC483338), mRNA Length = 2354 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tggcggcgcacgctggcatg 312 |||||||||||||||||||| Sbjct: 2145 tggcggcgcacgctggcatg 2126
>ref|XM_852269.1| PREDICTED: Canis familiaris similar to SEC14-like protein 1, transcript variant 4 (LOC483338), mRNA Length = 2303 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tggcggcgcacgctggcatg 312 |||||||||||||||||||| Sbjct: 2094 tggcggcgcacgctggcatg 2075
>ref|XM_852231.1| PREDICTED: Canis familiaris similar to SEC14-like protein 1, transcript variant 3 (LOC483338), mRNA Length = 2315 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tggcggcgcacgctggcatg 312 |||||||||||||||||||| Sbjct: 2106 tggcggcgcacgctggcatg 2087
>gb|BC056047.1| Xenopus laevis hypothetical protein MGC69006, mRNA (cDNA clone MGC:69006 IMAGE:4963694), complete cds Length = 1646 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 182 caagggggagaagcagctgc 201
>gb|AY392032.1| Mus musculus microtubule-associated protein 1 light chain 3 copy 5 (Map1lc3) pseudogene, complete sequence Length = 685 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 166 caagggggagaagcagctgc 185
>gb|AY392031.1| Mus musculus microtubule-associated protein 1 light chain 3 copy 4 (Map1lc3) pseudogene, complete sequence Length = 699 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 185 caagggggagaagcagctgc 204
>gb|AY392029.1| Mus musculus microtubule-associated protein 1 light chain 3 copy 2 (Map1lc3) pseudogene, complete sequence Length = 700 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 171 caagggggagaagcagctgc 190
>gb|AY392028.1| Mus musculus microtubule-associated protein 1 light chain 3 copy 1 (Map1lc3) pseudogene, complete sequence Length = 1533 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 171 caagggggagaagcagctgc 190
>gb|AC110169.7| Mus musculus chromosome 9, clone RP23-233D3, complete sequence Length = 193041 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gggggtggagggcaacggcc 415 |||||||||||||||||||| Sbjct: 31644 gggggtggagggcaacggcc 31625
>ref|NG_005234.1| Mus musculus microtubule-associated protein 1 light chain 3 pseudogene (Map1lc3-ps) on chromosome 9 Length = 1533 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 171 caagggggagaagcagctgc 190
>gb|BC051853.1| Homo sapiens cDNA clone IMAGE:6155276, **** WARNING: chimeric clone **** Length = 3404 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaac 39 ||||| |||||||||||||||||| Sbjct: 1539 cccaagtacttcaagcacaacaac 1562
>ref|NM_001007978.1| Xenopus tropicalis map1lc3a protein (map1lc3a), mRNA Length = 1869 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 174 caagggggagaagcagctgc 193
>gb|BC080488.1| Xenopus tropicalis map1lc3a protein, mRNA (cDNA clone MGC:89867 IMAGE:7029113), complete cds Length = 1869 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 174 caagggggagaagcagctgc 193
>gb|BC033017.1| Homo sapiens hypothetical protein FLJ40311, mRNA (cDNA clone MGC:26980 IMAGE:4825807), complete cds Length = 4090 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 48 cttcgtccgccagctcaacacctacgggttccggaaggtcgtgc 91 |||| |||||||||||||| |||||| ||||| ||||| |||| Sbjct: 328 cttcatccgccagctcaacctctacggcttccgcaaggtggtgc 371
>gb|BC033020.1| Homo sapiens hypothetical protein FLJ40311, mRNA (cDNA clone MGC:27073 IMAGE:4823233), complete cds Length = 4113 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 48 cttcgtccgccagctcaacacctacgggttccggaaggtcgtgc 91 |||| |||||||||||||| |||||| ||||| ||||| |||| Sbjct: 351 cttcatccgccagctcaacctctacggcttccgcaaggtggtgc 394
>gb|BT009891.1| Synthetic construct Homo sapiens heat shock transcription factor 1 mRNA, partial cds Length = 1590 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaac 39 ||||| |||||||||||||||||| Sbjct: 172 cccaagtacttcaagcacaacaac 195
>gb|AC142402.2| Homo sapiens chromosome 8, clone XXfos-800107C11, complete sequence Length = 46082 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 cccaactacttcaagcacaacaac 39 ||||| |||||||||||||||||| Sbjct: 29912 cccaagtacttcaagcacaacaac 29889
>emb|BX034283.1|CNS08YM7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA50AE09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1021 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gagaagcagctgctgtgcgagatc 156 ||||||||||||||| |||||||| Sbjct: 364 gagaagcagctgctgcgcgagatc 387
>emb|BX032013.1|CNS08WV5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47CG05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 996 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gagaagcagctgctgtgcgagatc 156 ||||||||||||||| |||||||| Sbjct: 309 gagaagcagctgctgcgcgagatc 332
>emb|BX028951.1|CNS08UI3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA43BB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 657 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gagaagcagctgctgtgcgagatc 156 ||||||||||||||| |||||||| Sbjct: 354 gagaagcagctgctgcgcgagatc 377
>emb|BX023916.1|CNS08QM8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA36CA10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 473 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gagaagcagctgctgtgcgagatc 156 ||||||||||||||| |||||||| Sbjct: 356 gagaagcagctgctgcgcgagatc 379
>emb|BX019042.1|CNS08MUU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA28DF12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1009 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 gagaagcagctgctgtgcgagatc 156 ||||||||||||||| |||||||| Sbjct: 365 gagaagcagctgctgcgcgagatc 388
>emb|Z46952.1|GMHSF21 G.max mRNA for heat shock transcription factor 21 Length = 671 Score = 40.1 bits (20), Expect = 6.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 22 tacttcaagcacaacaacttctcctccttcgtccgccagctcaacacctacgggtt 77 |||||||||||| ||| |||||| |||| | |||||||||||| |||| ||||| Sbjct: 355 tacttcaagcacggcaatttctccagcttcattcgccagctcaacgcctatgggtt 410
>emb|X61753.1|MMHSF1 M.musculus mRNA for heat shock transcription factor 1 Length = 1947 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaac 39 ||||| |||||||||||||||||| Sbjct: 311 cccaagtacttcaagcacaacaac 334
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 414 ccgcgcgaccagcgcggcggtgctgatg 441 ||||||||||| |||||||||| ||||| Sbjct: 2668921 ccgcgcgaccatcgcggcggtgatgatg 2668894
>ref|NG_005200.1| Mus musculus similar to microtubule-associated protein 1 light chain 3 beta (Map1lc3) pseudogene on chromosome 4 Length = 699 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 185 caagggggagaagcagctgc 204
>ref|NG_005193.1| Mus musculus microtubule-associated protein 1 light chain 3 copy 5 pseudogene (Map1lc3-5) on chromosome 11 Length = 685 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 166 caagggggagaagcagctgc 185
>emb|AL691413.5| Mouse DNA sequence from clone RP23-309E11 on chromosome 11 Contains a microtubule-associated protein 1 light chain 3 (Map1lc3) pseudogene, an interferon induced transmembrane protein 3-like (Ifitm3l) pseudogene, two novel pseudogenes, two novel genes, the 3' end of the Osbp2 gene for oxysterol binding protein 2 and two CpG islands, complete sequence Length = 164047 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 78789 caagggggagaagcagctgc 78770
>emb|AL596086.9| Mouse DNA sequence from clone RP23-168C20 on chromosome 11 Contains the 3' end of the Tex14 gene for testis expressed gene 14, complete sequence Length = 200501 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 48 cttcgtccgccagctcaacacctacgggttccggaaggtcgtgc 91 |||| |||||||||||||| |||||| ||||| ||||| |||| Sbjct: 95881 cttcatccgccagctcaacctctacggcttccgcaaggtggtgc 95924
>gb|BT007351.1| Homo sapiens heat shock transcription factor 1 mRNA, complete cds Length = 1590 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaac 39 ||||| |||||||||||||||||| Sbjct: 172 cccaagtacttcaagcacaacaac 195
>dbj|AK220158.1| Mus musculus mRNA for mKIAA1164 protein Length = 1927 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ggcggccccgccgcgccctc 392 |||||||||||||||||||| Sbjct: 729 ggcggccccgccgcgccctc 710
>gb|AF506518.1| Glycine max receptor-like kinase RHG4 (Rhg4) gene, complete cds Length = 5583 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 21 ctacttcaagcacaacaacttctcctcc 48 ||||||||| | |||||||||||||||| Sbjct: 1718 ctacttcaaccgcaacaacttctcctcc 1745
>gb|AE012149.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 57 of 460 of the complete genome Length = 11492 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 408 caacggccgcgcgaccagcgcggcggtg 435 ||||||| ||||| |||||||||||||| Sbjct: 8829 caacggcagcgcgcccagcgcggcggtg 8802
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 gcggcggtgctgatggacga 446 |||||||||||||||||||| Sbjct: 2773833 gcggcggtgctgatggacga 2773814
>dbj|AK132329.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:4022416K06 product:microtubule-associated protein 1 light chain 3 beta, full insert sequence Length = 2435 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 179 caagggggagaagcagctgc 198
>gb|AF255953.1| Mus musculus MAP1A/1B light chain 3 subunit mRNA, complete cds Length = 984 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 189 caagggggagaagcagctgc 208
>ref|XM_939614.1| PREDICTED: Homo sapiens hypothetical protein FLJ40311 (FLJ40311), mRNA Length = 4084 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 48 cttcgtccgccagctcaacacctacgggttccggaaggtcgtgc 91 |||| |||||||||||||| |||||| ||||| ||||| |||| Sbjct: 343 cttcatccgccagctcaacctctacggcttccgcaaggtggtgc 386
>ref|XM_064190.4| PREDICTED: Homo sapiens hypothetical protein FLJ40311 (FLJ40311), mRNA Length = 4084 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 48 cttcgtccgccagctcaacacctacgggttccggaaggtcgtgc 91 |||| |||||||||||||| |||||| ||||| ||||| |||| Sbjct: 343 cttcatccgccagctcaacctctacggcttccgcaaggtggtgc 386
>dbj|AK151614.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830032D15 product:microtubule-associated protein 1 light chain 3 beta, full insert sequence Length = 674 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 170 caagggggagaagcagctgc 189
>ref|XM_926368.1| PREDICTED: Homo sapiens similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1) (LOC642984), mRNA Length = 297 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaac 39 ||||| |||||||||||||||||| Sbjct: 88 cccaagtacttcaagcacaacaac 111
>ref|NM_172772.1| Mus musculus RIKEN cDNA B230380D07 gene (B230380D07Rik), mRNA Length = 2487 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ggcggccccgccgcgccctc 392 |||||||||||||||||||| Sbjct: 687 ggcggccccgccgcgccctc 668
>dbj|AK159631.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420026E16 product:hypothetical protein, full insert sequence Length = 1610 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 ggcggccccgccgcgccctc 392 |||||||||||||||||||| Sbjct: 226 ggcggccccgccgcgccctc 245
>gb|AC160636.2| Mus musculus BAC clone RP23-364M15 from chromosome 9, complete sequence Length = 139726 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 ggcggccccgccgcgccctc 392 |||||||||||||||||||| Sbjct: 34129 ggcggccccgccgcgccctc 34148
>dbj|AK003558.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110008A07 product:microtubule-associated protein 1 light chain 3, full insert sequence Length = 678 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 174 caagggggagaagcagctgc 193
>dbj|AK003205.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110001B17 product:microtubule-associated protein 1 light chain 3, full insert sequence Length = 676 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 172 caagggggagaagcagctgc 191
>dbj|AK003106.1| Mus musculus adult male heart cDNA, RIKEN full-length enriched library, clone:1010001C15 product:microtubule-associated protein 1 light chain 3, full insert sequence Length = 1711 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 172 caagggggagaagcagctgc 191
>dbj|AK046403.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230380D07 product:hypothetical Glycine-rich region/Prenyl group binding site (CAAX box)/ATP synthase alpha and beta subunit, central region/Glutamine-rich region containing protein, full insert sequence Length = 2514 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ggcggccccgccgcgccctc 392 |||||||||||||||||||| Sbjct: 687 ggcggccccgccgcgccctc 668
>dbj|AK046623.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430210G19 product:hypothetical Serine-rich region containing protein, full insert sequence Length = 1780 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ggcggccccgccgcgccctc 392 |||||||||||||||||||| Sbjct: 674 ggcggccccgccgcgccctc 655
>dbj|AK035930.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630018L02 product:hypothetical ATP synthase alpha and beta subunit, central region containing protein, full insert sequence Length = 1897 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ggcggccccgccgcgccctc 392 |||||||||||||||||||| Sbjct: 701 ggcggccccgccgcgccctc 682
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 408 caacggccgcgcgaccagcgcggcggtg 435 ||||||| ||||| |||||||||||||| Sbjct: 631720 caacggcagcgcgcccagcgcggcggtg 631693
>dbj|AK002795.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610038F24 product:microtubule-associated protein 1 light chain 3, full insert sequence Length = 678 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 174 caagggggagaagcagctgc 193
>dbj|AK012604.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700094D07 product:microtubule-associated protein 1 light chain 3, full insert sequence Length = 679 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 175 caagggggagaagcagctgc 194
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 tcggcggccccgccgcgccc 390 |||||||||||||||||||| Sbjct: 164437 tcggcggccccgccgcgccc 164418
>ref|NG_005254.1| Mus musculus microtubule-associated protein 1 light chain 3 pseudogene 2 (Map1lc3-ps2) on chromosome 14 Length = 700 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 caagggggagaagcagctgc 145 |||||||||||||||||||| Sbjct: 171 caagggggagaagcagctgc 190
>gb|AC142129.4| Rattus norvegicus BAC CH230-183M21 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 215272 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 cccaactacttcaagcacaacaac 39 ||||| |||||||||||||||||| Sbjct: 165599 cccaagtacttcaagcacaacaac 165622 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,268,675 Number of Sequences: 3902068 Number of extensions: 3268675 Number of successful extensions: 79386 Number of sequences better than 10.0: 285 Number of HSP's better than 10.0 without gapping: 300 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 76235 Number of HSP's gapped (non-prelim): 3129 length of query: 491 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 469 effective length of database: 17,147,199,772 effective search space: 8042036693068 effective search space used: 8042036693068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
