ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast19h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MFS18_MAIZE (P32439) MFS18 protein precursor 42 5e-04
2P47K_PSECL (P31521) 47 kDa protein (P47K) 29 5.8

>MFS18_MAIZE (P32439) MFS18 protein precursor|
          Length = 128

 Score = 42.4 bits (98), Expect = 5e-04
 Identities = 25/52 (48%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +3

Query: 96  MEKSTKMXXXXXXXXXXXXTG-AEARNIKTTEAAAASKDAVLQPTTFPPFDR 248
           M +S+KM               AEARNIKTT       DAV+QP TFPPFDR
Sbjct: 1   MARSSKMMVAARLLALALAVSTAEARNIKTT-TTEKKDDAVVQPQTFPPFDR 51



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>P47K_PSECL (P31521) 47 kDa protein (P47K)|
          Length = 419

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 43  ATRTLARSKNTSSGASYRWRSLPRWWRCSSSPCWPR 150
           A+R L       SG  ++W  + RWW       WPR
Sbjct: 301 ASRHLEIGLLAQSGKQFQWDYVGRWWNFIEPSQWPR 336


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.122    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,796,445
Number of Sequences: 219361
Number of extensions: 265210
Number of successful extensions: 727
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
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