ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast19d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome... 84 1e-13
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 84 1e-13
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 84 1e-13
4emb|Z19598.1|PLNRTABC P.laminosum nrtA-Phl, nir-Phl, nrtB-Phl an... 44 0.11
5gb|AC008348.5| Drosophila melanogaster clone BACR02I11, complete... 42 0.44
6gb|AC005714.11| Drosophila melanogaster clone BACR48M13, complet... 42 0.44
7gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65... 42 0.44
8gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome... 40 1.7
9ref|XM_460449.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 1.7
10gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 1.7
11ref|XM_947466.1| Theileria annulata strain Ankara DNA repair pro... 40 1.7
12emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 40 1.7
13emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4,... 40 1.7
14gb|L34879.1|ANAAZNIF Anabaena azollae nifB operon encoding nifB,... 40 1.7
15gb|AC097445.1| Drosophila melanogaster, chromosome 2R, region 43... 40 1.7
16gb|AC009352.5| Drosophila melanogaster, chromosome 2L, region 34... 40 1.7
17gb|AC093095.1| Drosophila melanogaster, chromosome 2L, region 33... 40 1.7
18dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.7
19dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.7
20gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 1.7
21dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 1.7
22gb|AF164961.1|AF164961 Streptomyces fradiae strain T#2717 urdamy... 40 1.7
23emb|CT571247.13| Mouse DNA sequence from clone RP24-116C19 on ch... 40 1.7
24gb|AE003637.3| Drosophila melanogaster chromosome 2L, section 46... 40 1.7
25gb|AE003842.4| Drosophila melanogaster chromosome 2R, section 8 ... 40 1.7
26gb|AC005198.1|AC005198 Drosophila melanogaster DNA sequence (P1 ... 40 1.7
27dbj|AP007294.1| Lotus japonicus genomic DNA, clone:LjT42E17, TM0... 40 1.7
28dbj|AP004483.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 1.7
29emb|AL837510.5| Mouse DNA sequence from clone RP23-200B23 on chr... 40 1.7
30gb|AF331918.1| Homo sapiens 19 19q13.3 carnitine acyltransferase... 38 6.9
31gb|BC060918.1| Danio rerio Tax1 (human T-cell leukemia virus typ... 38 6.9
32gb|BT017397.1| Zea mays clone EL01N0328F03.c mRNA sequence 38 6.9
33gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome... 38 6.9
34ref|XM_753979.1| Ustilago maydis 521 hypothetical protein (UM029... 38 6.9
35gb|AC008119.6| Homo sapiens 12 BAC RP11-951I11 (Roswell Park Can... 38 6.9
36ref|XM_774602.1| Giardia lamblia ATCC 50803 hypothetical protein... 38 6.9
37ref|XM_758018.1| Theileria parva strain Muguga chromosome 3 hypo... 38 6.9
38emb|AL359984.5| Human DNA sequence from clone RP11-179J15 on chr... 38 6.9
39emb|Y16031.1|HIVY16031 HIV-1 vif, vpr, tat, vpu genes, strain BCF12 38 6.9
40emb|AJ427478.2|SSC427478 Sus scrofa ASIP gene for agouti signall... 38 6.9
41gb|BC065315.1| Danio rerio Tax1 (human T-cell leukemia virus typ... 38 6.9
42emb|AL928631.4| Mouse DNA sequence from clone RP23-240K15 on chr... 38 6.9
43emb|BX572081.6| Zebrafish DNA sequence from clone DKEYP-86G5 in ... 38 6.9
44gb|AC011495.8| Homo sapiens chromosome 19 clone CTB-33G10, compl... 38 6.9
45dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 38 6.9
46gb|AE012512.1| Xanthomonas campestris pv. campestris str. ATCC 3... 38 6.9
47dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 38 6.9
48gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 38 6.9
49dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.9
50dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.9
51dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.9
52dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.9
53gb|AC010206.8|AC010206 Homo sapiens 12 BAC RP11-13G14 (Roswell P... 38 6.9
54gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced prot... 38 6.9
55ref|NM_212664.1| Danio rerio Tax1 (human T-cell leukemia virus t... 38 6.9
56gb|AC013445.8| Homo sapiens BAC clone RP11-489J10 from 2, comple... 38 6.9
57dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.9
58dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.9
59gb|AC012065.8| Homo sapiens BAC clone RP11-130L8 from 2, complet... 38 6.9
60gb|AC022414.8| Homo sapiens chromosome 5 clone CTC-316M18, compl... 38 6.9
61dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.9
62dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 38 6.9
63dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 38 6.9
64dbj|AP006562.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.9
65dbj|AP005861.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.9
66dbj|AK121054.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 6.9
67gb|AF063648.1|AF063648 Gallus gallus clone hm37155 genomic marke... 38 6.9
68gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 38 6.9
69gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 38 6.9
70gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 6.9
71emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4,... 38 6.9
72emb|AL606990.3|OSJN00122 Oryza sativa genomic DNA, chromosome 4,... 38 6.9
73emb|AL731750.3|CNS08C7Z Oryza sativa chromosome 12, . BAC OJ1055... 38 6.9
74dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 38 6.9
75dbj|AP006362.1| Lotus japonicus genomic DNA, chromosome 1, clone... 38 6.9
76dbj|D78256.1| Cucurbita cv. Kurokawa Amakuri mRNA for Isocitrate... 38 6.9
77emb|AL773527.8| Pig DNA sequence from clone XX-707F1, complete s... 38 6.9 
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0004P24, complete sequence
          Length = 137721

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                               
Query: 95    gtcgagcacatcgacctcatcccggggatgcccgacgacgtcgccgtcga 144
             ||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 18275 gtcgagcacgtcgagctcatcccggggatgcccgacgacgtcgccgtcga 18324
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                                 
Query: 95      gtcgagcacatcgacctcatcccggggatgcccgacgacgtcgccgtcga 144
               ||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 7798680 gtcgagcacgtcgagctcatcccggggatgcccgacgacgtcgccgtcga 7798631
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 48/50 (96%)
 Strand = Plus / Minus

                                                                 
Query: 95      gtcgagcacatcgacctcatcccggggatgcccgacgacgtcgccgtcga 144
               ||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 7868767 gtcgagcacgtcgagctcatcccggggatgcccgacgacgtcgccgtcga 7868718
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>emb|Z19598.1|PLNRTABC P.laminosum nrtA-Phl, nir-Phl, nrtB-Phl and nrtC-Phl genes
          Length = 6449

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 11   attcccaatcccaaattcccaatccc 36
            |||||||||||| |||||||||||||
Sbjct: 3417 attcccaatccctaattcccaatccc 3442
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>gb|AC008348.5| Drosophila melanogaster clone BACR02I11, complete sequence
          Length = 191467

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 3      ccatctccattcccaatcccaaattcccaatcccagtccca 43
              |||| ||||||||||||||| ||| || ||||||| |||||
Sbjct: 134588 ccatttccattcccaatcccgaataccgaatcccattccca 134548
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>gb|AC005714.11| Drosophila melanogaster clone BACR48M13, complete sequence
          Length = 177736

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 3     ccatctccattcccaatcccaaattcccaatcccagtccca 43
             |||| ||||||||||||||| ||| || ||||||| |||||
Sbjct: 40884 ccatttccattcccaatcccgaataccgaatcccattccca 40844
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>gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65 of 73 of the complete
             sequence
          Length = 307324

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 3     ccatctccattcccaatcccaaattcccaatcccagtccca 43
             |||| ||||||||||||||| ||| || ||||||| |||||
Sbjct: 75887 ccatttccattcccaatcccgaataccgaatcccattccca 75847
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>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0056I11, complete sequence
          Length = 145796

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    cccaatcccaaattcccaat 33
             ||||||||||||||||||||
Sbjct: 96656 cccaatcccaaattcccaat 96675
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>ref|XM_460449.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F02222g)
            partial mRNA
          Length = 3024

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 52   aacgaagatgaggaaccagaagag 75
            ||||||||||| ||||||||||||
Sbjct: 2281 aacgaagatgaagaaccagaagag 2304
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 14      cccaatcccaaattcccaatccca 37
               ||||||||| ||||||||||||||
Sbjct: 4868812 cccaatccccaattcccaatccca 4868835



 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 14      cccaatcccaaattcccaatccc 36
               ||||||||||||| |||||||||
Sbjct: 3003903 cccaatcccaaatccccaatccc 3003925
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>ref|XM_947466.1| Theileria annulata strain Ankara DNA repair protein Rad50 (TA11630)
            partial mRNA
          Length = 3420

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 43   agaagagataacgaagatga 62
            ||||||||||||||||||||
Sbjct: 1945 agaagagataacgaagatga 1964
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>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 52     aacgaagatgaggaaccagaagag 75
              ||||||||||| ||||||||||||
Sbjct: 173938 aacgaagatgaagaaccagaagag 173915
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>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12,
             complete sequence
          Length = 179644

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    ccaatcccaaattcccaatc 34
             ||||||||||||||||||||
Sbjct: 71551 ccaatcccaaattcccaatc 71532
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>gb|L34879.1|ANAAZNIF Anabaena azollae nifB operon encoding nifB, nifS, and nifU genes,
            complete cds's, ferredoxin (fdxN) gene, complete cds,
            dinitrogenase reductase alpha subunit (nifH) gene,
            complete cds, and nifD gene, 5' end
          Length = 6061

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 14   cccaatcccaaattcccaatccca 37
            ||||||||| ||||||||||||||
Sbjct: 3739 cccaatccccaattcccaatccca 3762
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>gb|AC097445.1| Drosophila melanogaster, chromosome 2R, region 43A-43B, BAC clone
             BACR12F04, complete sequence
          Length = 197994

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 32/35 (91%), Gaps = 2/35 (5%)
 Strand = Plus / Minus

                                                
Query: 3     ccatctccattcccaatcccaaattcccaatccca 37
             ||||||||||||||| ||||  |||||||||||||
Sbjct: 23974 ccatctccattcccattccc--attcccaatccca 23942
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>gb|AC009352.5| Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone
             BACR11M13, complete sequence
          Length = 190301

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    attcccaatcccagtcccag 44
             ||||||||||||||||||||
Sbjct: 14425 attcccaatcccagtcccag 14406
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>gb|AC093095.1| Drosophila melanogaster, chromosome 2L, region 33F-34A, BAC clone
              BACR17H02, complete sequence
          Length = 167544

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     attcccaatcccagtcccag 44
              ||||||||||||||||||||
Sbjct: 122151 attcccaatcccagtcccag 122132
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 15       ccaatcccaaattcccaatc 34
                ||||||||||||||||||||
Sbjct: 29934799 ccaatcccaaattcccaatc 29934780



 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 18       atcccaaattcccaatccc 36
                |||||||||||||||||||
Sbjct: 17097089 atcccaaattcccaatccc 17097107
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 14      cccaatcccaaattcccaat 33
               ||||||||||||||||||||
Sbjct: 1644496 cccaatcccaaattcccaat 1644515



 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 125      cccgacgacgtcgccgtcg 143
                |||||||||||||||||||
Sbjct: 20666705 cccgacgacgtcgccgtcg 20666687
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     aggagcgcaaggtcgagcac 103
              ||||||||||||||||||||
Sbjct: 835857 aggagcgcaaggtcgagcac 835876
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 120     ggatgcccgacgacgtcgcc 139
               ||||||||||||||||||||
Sbjct: 2867414 ggatgcccgacgacgtcgcc 2867395
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>gb|AF164961.1|AF164961 Streptomyces fradiae strain T#2717 urdamycin biosynthetic gene cluster,
             partial sequence
          Length = 11790

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 89    cgcaaggtcgagcacatcgacctc 112
             ||||||||||| ||||||||||||
Sbjct: 11023 cgcaaggtcgatcacatcgacctc 11000
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>emb|CT571247.13| Mouse DNA sequence from clone RP24-116C19 on chromosome 17, complete
              sequence
          Length = 137161

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 27     tcccaatcccagtcccagaagaga 50
              ||||| ||||||||||||||||||
Sbjct: 103304 tcccagtcccagtcccagaagaga 103281
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>gb|AE003637.3| Drosophila melanogaster chromosome 2L, section 46 of 83 of the complete
              sequence
          Length = 222787

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     attcccaatcccagtcccag 44
              ||||||||||||||||||||
Sbjct: 180588 attcccaatcccagtcccag 180569
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>gb|AE003842.4| Drosophila melanogaster chromosome 2R, section 8 of 73 of the complete
              sequence
          Length = 231065

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 32/35 (91%), Gaps = 2/35 (5%)
 Strand = Plus / Plus

                                                 
Query: 3      ccatctccattcccaatcccaaattcccaatccca 37
              ||||||||||||||| ||||  |||||||||||||
Sbjct: 206102 ccatctccattcccattccc--attcccaatccca 206134
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>gb|AC005198.1|AC005198 Drosophila melanogaster DNA sequence (P1 DS08462 (D163)), complete
             sequence
          Length = 81909

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 32/35 (91%), Gaps = 2/35 (5%)
 Strand = Plus / Minus

                                                
Query: 3     ccatctccattcccaatcccaaattcccaatccca 37
             ||||||||||||||| ||||  |||||||||||||
Sbjct: 22530 ccatctccattcccattccc--attcccaatccca 22498
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>dbj|AP007294.1| Lotus japonicus genomic DNA, clone:LjT42E17, TM0355, complete sequence
          Length = 124602

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    cccaatcccaaattcccaat 33
             ||||||||||||||||||||
Sbjct: 83395 cccaatcccaaattcccaat 83376



 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    cccaatcccaaattcccaat 33
             ||||||||||||||||||||
Sbjct: 79059 cccaatcccaaattcccaat 79078
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>dbj|AP004483.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13O04, TM0016,
              complete sequence
          Length = 122116

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     cccaatcccaaattcccaat 33
              ||||||||||||||||||||
Sbjct: 121534 cccaatcccaaattcccaat 121515



 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     cccaatcccaaattcccaat 33
              ||||||||||||||||||||
Sbjct: 116191 cccaatcccaaattcccaat 116210
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>emb|AL837510.5| Mouse DNA sequence from clone RP23-200B23 on chromosome 4, complete
              sequence
          Length = 199537

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     ttcccaatcccaaattccca 31
              ||||||||||||||||||||
Sbjct: 163917 ttcccaatcccaaattccca 163936
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>gb|AF331918.1| Homo sapiens 19 19q13.3 carnitine acyltransferase-like protein 1
             (CATL1) gene, complete cds; nuclear gene for mitochondrial
             product, alternatively spliced
          Length = 25804

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 1     atccatctccattcccaatccca 23
             |||||||||||| ||||||||||
Sbjct: 20472 atccatctccatacccaatccca 20494
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>gb|BC060918.1| Danio rerio Tax1 (human T-cell leukemia virus type I) binding protein
            1, mRNA (cDNA clone MGC:73219 IMAGE:4143696), complete
            cds
          Length = 3235

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 61   gaggaaccagaagagccgc 79
            |||||||||||||||||||
Sbjct: 2234 gaggaaccagaagagccgc 2252
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>gb|BT017397.1| Zea mays clone EL01N0328F03.c mRNA sequence
          Length = 1342

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 14 cccaatcccaaattcccaatccc 36
          |||||||| ||||||||||||||
Sbjct: 14 cccaatcctaaattcccaatccc 36
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>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02,
             complete sequence
          Length = 125650

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 125   cccgacgacgtcgccgtcg 143
             |||||||||||||||||||
Sbjct: 88745 cccgacgacgtcgccgtcg 88727
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>ref|XM_753979.1| Ustilago maydis 521 hypothetical protein (UM02925.1) partial mRNA
          Length = 2310

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 66   accagaagagccgcgtccaggag 88
            |||||||||||||| ||||||||
Sbjct: 1821 accagaagagccgcttccaggag 1799
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>gb|AC008119.6| Homo sapiens 12 BAC RP11-951I11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 173153

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 13    tcccaatcccaaattccca 31
             |||||||||||||||||||
Sbjct: 16870 tcccaatcccaaattccca 16888
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>ref|XM_774602.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_574_81797_77412)
            partial mRNA
          Length = 4386

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 28   cccaatcccagtcccagaa 46
            |||||||||||||||||||
Sbjct: 3072 cccaatcccagtcccagaa 3090
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>ref|XM_758018.1| Theileria parva strain Muguga chromosome 3 hypothetical protein
          (TP03_0093) partial mRNA
          Length = 2568

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 3  ccatctccattcccaatcc 21
          |||||||||||||||||||
Sbjct: 44 ccatctccattcccaatcc 62
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>emb|AL359984.5| Human DNA sequence from clone RP11-179J15 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 62109

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    cattcccaatcccaaattc 28
             |||||||||||||||||||
Sbjct: 23030 cattcccaatcccaaattc 23048
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>emb|Y16031.1|HIVY16031 HIV-1 vif, vpr, tat, vpu genes, strain BCF12
          Length = 1333

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 51   taacgaagatgaggaaccagaag 73
            ||||||||||||||||| |||||
Sbjct: 1246 taacgaagatgaggaacaagaag 1268
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>emb|AJ427478.2|SSC427478 Sus scrofa ASIP gene for agouti signalling protein and AHCY gene for
              S-adenosylhomocysteine hydrolase
          Length = 204138

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 17     aatcccaaattcccaatcc 35
              |||||||||||||||||||
Sbjct: 116339 aatcccaaattcccaatcc 116357
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>gb|BC065315.1| Danio rerio Tax1 (human T-cell leukemia virus type I) binding protein
            1, mRNA (cDNA clone MGC:77129 IMAGE:6960980), complete
            cds
          Length = 3252

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 61   gaggaaccagaagagccgc 79
            |||||||||||||||||||
Sbjct: 2220 gaggaaccagaagagccgc 2238
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>emb|AL928631.4| Mouse DNA sequence from clone RP23-240K15 on chromosome 4, complete
              sequence
          Length = 178426

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 39     tcccagaagagataacgaa 57
              |||||||||||||||||||
Sbjct: 133130 tcccagaagagataacgaa 133112
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>emb|BX572081.6| Zebrafish DNA sequence from clone DKEYP-86G5 in linkage group 11,
             complete sequence
          Length = 152148

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     ccattcccaatcccaaatt 27
             |||||||||||||||||||
Sbjct: 47642 ccattcccaatcccaaatt 47660
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>gb|AC011495.8| Homo sapiens chromosome 19 clone CTB-33G10, complete sequence
          Length = 209844

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 1      atccatctccattcccaatccca 23
              |||||||||||| ||||||||||
Sbjct: 134972 atccatctccatacccaatccca 134994
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 14      cccaatcccaaattcccaatccc 36
               ||||||||||||| |||||||||
Sbjct: 2457455 cccaatcccaaatgcccaatccc 2457433



 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 14      cccaatcccaaattcccaatccc 36
               ||||||||||| |||||||||||
Sbjct: 2005926 cccaatcccaatttcccaatccc 2005904
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>gb|AE012512.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 420
            of 460 of the complete genome
          Length = 11141

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 10   cattcccaatcccaaattcccaatccc 36
            ||||||||||||| ||| |||||||||
Sbjct: 5098 cattcccaatccccaatccccaatccc 5072
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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 5       atctccattcccaatccca 23
               |||||||||||||||||||
Sbjct: 1571054 atctccattcccaatccca 1571072
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 10      cattcccaatcccaaattcccaatccc 36
               ||||||||||||| ||| |||||||||
Sbjct: 4719590 cattcccaatccccaatccccaatccc 4719564
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 18      atcccaaattcccaatccc 36
               |||||||||||||||||||
Sbjct: 8190016 atcccaaattcccaatccc 8190034
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 13       tcccaatcccaaattcccaatcc 35
                ||||||||||||| |||||||||
Sbjct: 13453317 tcccaatcccaaactcccaatcc 13453339
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 18       atcccaaattcccaatccc 36
                |||||||||||||||||||
Sbjct: 23849658 atcccaaattcccaatccc 23849640
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 16       caatcccaaattcccaatc 34
                |||||||||||||||||||
Sbjct: 31108579 caatcccaaattcccaatc 31108597
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>gb|AC010206.8|AC010206 Homo sapiens 12 BAC RP11-13G14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 171523

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 13    tcccaatcccaaattccca 31
             |||||||||||||||||||
Sbjct: 61717 tcccaatcccaaattccca 61699
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>gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced protein 1-like protein mRNA,
           complete cds
          Length = 1160

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 126 ccgacgacgtcgccgtcga 144
           |||||||||||||||||||
Sbjct: 545 ccgacgacgtcgccgtcga 563
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>ref|NM_212664.1| Danio rerio Tax1 (human T-cell leukemia virus type I) binding protein
            1 (tax1bp1), mRNA
          Length = 3252

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 61   gaggaaccagaagagccgc 79
            |||||||||||||||||||
Sbjct: 2220 gaggaaccagaagagccgc 2238
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>gb|AC013445.8| Homo sapiens BAC clone RP11-489J10 from 2, complete sequence
          Length = 183960

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 9     ccattcccaatcccaaatt 27
             |||||||||||||||||||
Sbjct: 35420 ccattcccaatcccaaatt 35438
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>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0439E07
          Length = 176486

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 16     caatcccaaattcccaatc 34
              |||||||||||||||||||
Sbjct: 165558 caatcccaaattcccaatc 165576
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>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0014K08
          Length = 177263

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    caatcccaaattcccaatc 34
             |||||||||||||||||||
Sbjct: 34924 caatcccaaattcccaatc 34942
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>gb|AC012065.8| Homo sapiens BAC clone RP11-130L8 from 2, complete sequence
          Length = 206021

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 27     tcccaatcccagtcccaga 45
              |||||||||||||||||||
Sbjct: 193407 tcccaatcccagtcccaga 193425
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>gb|AC022414.8| Homo sapiens chromosome 5 clone CTC-316M18, complete sequence
          Length = 128811

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    cattcccaatcccaaattc 28
             |||||||||||||||||||
Sbjct: 90660 cattcccaatcccaaattc 90678
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>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1111_H02
          Length = 108603

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 18    atcccaaattcccaatccc 36
             |||||||||||||||||||
Sbjct: 41362 atcccaaattcccaatccc 41344
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 14      cccaatcccaaattcccaatccc 36
               ||||||||||||| |||||||||
Sbjct: 5660389 cccaatcccaaatccccaatccc 5660411



 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 14      cccaatcccaaattcccaatccc 36
               ||||||||| |||||||||||||
Sbjct: 3619407 cccaatccccaattcccaatccc 3619429
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 93      aggtcgagcacatcgacct 111
               |||||||||||||||||||
Sbjct: 3951920 aggtcgagcacatcgacct 3951938
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>dbj|AP006562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1175F05
          Length = 126842

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 13    tcccaatcccaaattcccaatcc 35
             ||||||||||||| |||||||||
Sbjct: 28245 tcccaatcccaaactcccaatcc 28267
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>dbj|AP005861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0025E03
          Length = 156806

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 13     tcccaatcccaaattcccaatcc 35
              ||||||||||||| |||||||||
Sbjct: 124661 tcccaatcccaaactcccaatcc 124683
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>dbj|AK121054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055P22, full
           insert sequence
          Length = 1972

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 125 cccgacgacgtcgccgtcg 143
           |||||||||||||||||||
Sbjct: 269 cccgacgacgtcgccgtcg 287
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>gb|AF063648.1|AF063648 Gallus gallus clone hm37155 genomic marker COM154
          Length = 344

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 13  tcccaatcccaaattcccaatcccagtccca 43
           ||||||||||| | ||||||||||| |||||
Sbjct: 212 tcccaatcccataatcccaatcccaatccca 182
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 14      cccaatcccaaattcccaatccc 36
               ||||||||||||| |||||||||
Sbjct: 2477760 cccaatcccaaatgcccaatccc 2477738



 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 14      cccaatcccaaattcccaatccc 36
               ||||||||||| |||||||||||
Sbjct: 2025785 cccaatcccaatttcccaatccc 2025763
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 124     gcccgacgacgtcgccgtc 142
               |||||||||||||||||||
Sbjct: 1601767 gcccgacgacgtcgccgtc 1601749
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 18      atcccaaattcccaatccc 36
               |||||||||||||||||||
Sbjct: 8189897 atcccaaattcccaatccc 8189915
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>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19,
             complete sequence
          Length = 169559

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    atcccaaattcccaatccc 36
             |||||||||||||||||||
Sbjct: 41386 atcccaaattcccaatccc 41404
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>emb|AL606990.3|OSJN00122 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0066J23,
              complete sequence
          Length = 156934

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 18     atcccaaattcccaatccc 36
              |||||||||||||||||||
Sbjct: 152345 atcccaaattcccaatccc 152363
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>emb|AL731750.3|CNS08C7Z Oryza sativa chromosome 12, . BAC OJ1055_H05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 113332

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    atcccaaattcccaatccc 36
             |||||||||||||||||||
Sbjct: 66061 atcccaaattcccaatccc 66079
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 103     catcgacctcatcccggggatgc 125
               ||||||||||| |||||||||||
Sbjct: 3021983 catcgacctcagcccggggatgc 3022005



 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 97     cgagcacatcgacctcatc 115
              |||||||||||||||||||
Sbjct: 537870 cgagcacatcgacctcatc 537852
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>dbj|AP006362.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34B12, TM0147a,
             complete sequence
          Length = 36143

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    tcccaaattcccaatccca 37
             |||||||||||||||||||
Sbjct: 29983 tcccaaattcccaatccca 30001
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>dbj|D78256.1| Cucurbita cv. Kurokawa Amakuri mRNA for Isocitrate Lyase, complete
            cds
          Length = 1983

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 33   tcccagtcccagaagagat 51
            |||||||||||||||||||
Sbjct: 1156 tcccagtcccagaagagat 1138
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>emb|AL773527.8| Pig DNA sequence from clone XX-707F1, complete sequence
          Length = 137286

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 17     aatcccaaattcccaatcc 35
              |||||||||||||||||||
Sbjct: 119835 aatcccaaattcccaatcc 119853


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,093,036
Number of Sequences: 3902068
Number of extensions: 1093036
Number of successful extensions: 92248
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 90986
Number of HSP's gapped (non-prelim): 1259
length of query: 144
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 123
effective length of database: 17,151,101,840
effective search space: 2109585526320
effective search space used: 2109585526320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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