ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast19a09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197798.1| Oryza sativa (japonica cultivar-group) putative chloroplast chaperonin (OSJNBa0057L21.3), mRNA Length = 683 Score = 234 bits (118), Expect = 2e-58 Identities = 219/252 (86%), Gaps = 3/252 (1%) Strand = Plus / Plus Query: 153 cgccgcccccggccgccgcgccgcatcctccgtgcgcgtgcgcgccgccatcaagtgcga 212 ||||||| |||||||||||||||| |||||| | ||||| ||||||| |||||| ||| Sbjct: 171 cgccgccaccggccgccgcgccgcctcctccctccgcgt---cgccgccctcaagtacga 227 Query: 213 cccatccaaggtggagccgcagtccgaccgggtgctcgtccgtctcgagactatcccaga 272 ||| |||||||||| ||||||||||||||||||||||||||| ||||| || || || Sbjct: 228 cccttccaaggtggcgccgcagtccgaccgggtgctcgtccgcctcgaacagattcctga 287 Query: 273 gaaatctgctgggggagttctgctaccgaaatctgctgttaaatttgagagatatttgat 332 |||||||| ||| ||||| ||||| || |||||||||||||| |||||||| |||||||| Sbjct: 288 gaaatctgttggaggagtcctgctgccaaaatctgctgttaagtttgagaggtatttgat 347 Query: 333 gggcgagattttatcggtcggcgttgatgttagtgaagttgaagctggaaagaaggttct 392 ||| |||||||| || || || | |||||||| ||||||||||||||||||||||||||| Sbjct: 348 gggtgagattttgtctgttggtgctgatgttaatgaagttgaagctggaaagaaggttct 407 Query: 393 cttctcggacat 404 |||||| ||||| Sbjct: 408 cttctctgacat 419 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79 atggccccctccctcctcgccgccgccgcctcgcccttcctcctccacggcgccg 133
>gb|AY110237.1| Zea mays CL7048_1 mRNA sequence Length = 972 Score = 167 bits (84), Expect = 3e-38 Identities = 171/200 (85%) Strand = Plus / Plus Query: 205 aagtgcgacccatccaaggtggagccgcagtccgaccgggtgctcgtccgtctcgagact 264 |||| |||||| ||||||||| ||||||| ||||||||| ||||||||||| ||| Sbjct: 391 aagtacgaccctgccaaggtggcgccgcagaacgaccgggttctcgtccgtcttgagcag 450 Query: 265 atcccagagaaatctgctgggggagttctgctaccgaaatctgctgttaaatttgagaga 324 ||||| |||||||||||||| || || ||||||| |||||||||||||| ||||||||| Sbjct: 451 atccctgagaaatctgctggcggtgtattgctaccaaaatctgctgttaagtttgagaga 510 Query: 325 tatttgatgggcgagattttatcggtcggcgttgatgttagtgaagttgaagctggaaag 384 ||| ||||||| |||||| ||||| |||| | ||| || ||||||||||| ||||| ||| Sbjct: 511 tatctgatgggtgagattctatcgatcggtgctgaagtcagtgaagttgaggctgggaag 570 Query: 385 aaggttctcttctcggacat 404 |||||||||||||| ||||| Sbjct: 571 aaggttctcttctcagacat 590
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Minus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 74694 atggccccctccctcctcgccgccgccgcctcgcccttcctcctccacggcgccg 74640 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 272 agaaatctgctgggggagttctgctaccgaaatctgctgttaaatttgagagatatttga 331 ||||||||| ||| ||||| ||||| || |||||||||||||| |||||||| ||||||| Sbjct: 73312 agaaatctgttggaggagtcctgctgccaaaatctgctgttaagtttgagaggtatttga 73253 Query: 332 tggg 335 |||| Sbjct: 73252 tggg 73249 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 221 aggtggagccgcagtccgaccgggtgctcgtccgtctcga 260 |||||| ||||||||||||||||||||||||||| ||||| Sbjct: 74430 aggtggcgccgcagtccgaccgggtgctcgtccgcctcga 74391 Score = 60.0 bits (30), Expect = 6e-06 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Minus Query: 153 cgccgcccccggccgccgcgccgcatcctccgtgcgcgtgcgcgccgccatcaagtgcga 212 ||||||| |||||||||||||||| |||||| | ||||| ||||||| |||||| ||| Sbjct: 74602 cgccgccaccggccgccgcgccgcctcctccctccgcgt---cgccgccctcaagtacga 74546 Query: 213 cccatccaaggt 224 ||| |||||||| Sbjct: 74545 cccttccaaggt 74534 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 357 tgatgttagtgaagttgaagctggaaagaaggt 389 |||||||| |||||||||||||||||||||||| Sbjct: 73141 tgatgttaatgaagttgaagctggaaagaaggt 73109
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 21933627 atggccccctccctcctcgccgccgccgcctcgcccttcctcctccacggcgccg 21933681 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 272 agaaatctgctgggggagttctgctaccgaaatctgctgttaaatttgagagatatttga 331 ||||||||| ||| ||||| ||||| || |||||||||||||| |||||||| ||||||| Sbjct: 21935009 agaaatctgttggaggagtcctgctgccaaaatctgctgttaagtttgagaggtatttga 21935068 Query: 332 tggg 335 |||| Sbjct: 21935069 tggg 21935072 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 221 aggtggagccgcagtccgaccgggtgctcgtccgtctcga 260 |||||| ||||||||||||||||||||||||||| ||||| Sbjct: 21933891 aggtggcgccgcagtccgaccgggtgctcgtccgcctcga 21933930 Score = 60.0 bits (30), Expect = 6e-06 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 153 cgccgcccccggccgccgcgccgcatcctccgtgcgcgtgcgcgccgccatcaagtgcga 212 ||||||| |||||||||||||||| |||||| | ||||| ||||||| |||||| ||| Sbjct: 21933719 cgccgccaccggccgccgcgccgcctcctccctccgcgt---cgccgccctcaagtacga 21933775 Query: 213 cccatccaaggt 224 ||| |||||||| Sbjct: 21933776 cccttccaaggt 21933787 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 357 tgatgttagtgaagttgaagctggaaagaaggt 389 |||||||| |||||||||||||||||||||||| Sbjct: 21935180 tgatgttaatgaagttgaagctggaaagaaggt 21935212 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 cctcgccgccgccacctcgcc 107 ||||||||||||||||||||| Sbjct: 19819610 cctcgccgccgccacctcgcc 19819590 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cctccctcctcgccgccgcc 99 |||||||||||||||||||| Sbjct: 12988375 cctccctcctcgccgccgcc 12988356
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 101 bits (51), Expect = 2e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 21945290 atggccccctccctcctcgccgccgccgcctcgcccttcctcctccacggcgccg 21945344 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 272 agaaatctgctgggggagttctgctaccgaaatctgctgttaaatttgagagatatttga 331 ||||||||| ||| ||||| ||||| || |||||||||||||| |||||||| ||||||| Sbjct: 21946672 agaaatctgttggaggagtcctgctgccaaaatctgctgttaagtttgagaggtatttga 21946731 Query: 332 tggg 335 |||| Sbjct: 21946732 tggg 21946735 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 221 aggtggagccgcagtccgaccgggtgctcgtccgtctcga 260 |||||| ||||||||||||||||||||||||||| ||||| Sbjct: 21945554 aggtggcgccgcagtccgaccgggtgctcgtccgcctcga 21945593 Score = 60.0 bits (30), Expect = 6e-06 Identities = 62/72 (86%), Gaps = 3/72 (4%) Strand = Plus / Plus Query: 153 cgccgcccccggccgccgcgccgcatcctccgtgcgcgtgcgcgccgccatcaagtgcga 212 ||||||| |||||||||||||||| |||||| | ||||| ||||||| |||||| ||| Sbjct: 21945382 cgccgccaccggccgccgcgccgcctcctccctccgcgt---cgccgccctcaagtacga 21945438 Query: 213 cccatccaaggt 224 ||| |||||||| Sbjct: 21945439 cccttccaaggt 21945450 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 357 tgatgttagtgaagttgaagctggaaagaaggt 389 |||||||| |||||||||||||||||||||||| Sbjct: 21946843 tgatgttaatgaagttgaagctggaaagaaggt 21946875 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 cctcgccgccgccacctcgcc 107 ||||||||||||||||||||| Sbjct: 19830886 cctcgccgccgccacctcgcc 19830866 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cctccctcctcgccgccgcc 99 |||||||||||||||||||| Sbjct: 12995715 cctccctcctcgccgccgcc 12995696
>ref|XM_450230.1| Oryza sativa (japonica cultivar-group), mRNA Length = 285 Score = 58.0 bits (29), Expect = 2e-05 Identities = 49/55 (89%), Gaps = 3/55 (5%) Strand = Plus / Plus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||| ||||||||||||| ||||||| ||||||||||||||| ||||||||| Sbjct: 1 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacggcgccg 52
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 2e-05 Identities = 49/55 (89%), Gaps = 3/55 (5%) Strand = Plus / Plus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||| ||||||||||||| ||||||| ||||||||||||||| ||||||||| Sbjct: 3301764 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacggcgccg 3301815 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcg 124 ||||| ||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 13686965 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacggcg 13686917 Score = 50.1 bits (25), Expect = 0.006 Identities = 48/55 (87%), Gaps = 3/55 (5%) Strand = Plus / Minus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||| ||||||||||||| ||||||| ||||||||||||||| || |||||| Sbjct: 13686822 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacagcgccg 13686771 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cgccgcccccggccgccgcg 172 |||||||||||||||||||| Sbjct: 16605384 cgccgcccccggccgccgcg 16605365 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gccccctccctcctcgccgccgcc 99 |||||||||| ||||||||||||| Sbjct: 4952747 gccccctcccccctcgccgccgcc 4952770
>dbj|AP005729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0069P02 Length = 163033 Score = 58.0 bits (29), Expect = 2e-05 Identities = 49/55 (89%), Gaps = 3/55 (5%) Strand = Plus / Plus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||| ||||||||||||| ||||||| ||||||||||||||| ||||||||| Sbjct: 17696 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacggcgccg 17747
>dbj|AK108228.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-F09, full insert sequence Length = 819 Score = 58.0 bits (29), Expect = 2e-05 Identities = 49/55 (89%), Gaps = 3/55 (5%) Strand = Plus / Plus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||| ||||||||||||| ||||||| ||||||||||||||| ||||||||| Sbjct: 168 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacggcgccg 219
>ref|NM_193167.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1707 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 87 cctcgccgccgccacctcgcccttcctcctc 117 |||||||||||||||||| |||||||||||| Sbjct: 1584 cctcgccgccgccacctcccccttcctcctc 1614
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 87 cctcgccgccgccacctcgcccttcctcctc 117 |||||||||||||||||| |||||||||||| Sbjct: 19000090 cctcgccgccgccacctcccccttcctcctc 19000060 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Plus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcg 124 ||||| ||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 35459532 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacggcg 35459580 Score = 50.1 bits (25), Expect = 0.006 Identities = 48/55 (87%), Gaps = 3/55 (5%) Strand = Plus / Plus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||| ||||||||||||| ||||||| ||||||||||||||| || |||||| Sbjct: 35459675 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacagcgccg 35459726 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 85 ctcctcgccgccgccacctcgcccttcctcctc 117 ||||||||||||||| || ||| |||||||||| Sbjct: 23329235 ctcctcgccgccgccgccgcgctcttcctcctc 23329267 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 ccccctccctcctcgccgccgccac 101 |||||||||||||| |||||||||| Sbjct: 9191540 ccccctccctcctccccgccgccac 9191516 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccgccgcgccgcatcctccg 184 |||||||||||||||||||| Sbjct: 39602499 ccgccgcgccgcatcctccg 39602518
>dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1129H01 Length = 101104 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 87 cctcgccgccgccacctcgcccttcctcctc 117 |||||||||||||||||| |||||||||||| Sbjct: 57133 cctcgccgccgccacctcccccttcctcctc 57103
>ref|XM_450909.1| Oryza sativa (japonica cultivar-group), mRNA Length = 777 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Plus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcg 124 ||||| ||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 170 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacggcg 218 Score = 50.1 bits (25), Expect = 0.006 Identities = 48/55 (87%), Gaps = 3/55 (5%) Strand = Plus / Plus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||| ||||||||||||| ||||||| ||||||||||||||| || |||||| Sbjct: 274 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacagcgccg 325
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088C09 Length = 154084 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Plus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcg 124 ||||| ||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 83481 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacggcg 83529 Score = 50.1 bits (25), Expect = 0.006 Identities = 48/55 (87%), Gaps = 3/55 (5%) Strand = Plus / Plus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||| ||||||||||||| ||||||| ||||||||||||||| || |||||| Sbjct: 83624 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacagcgccg 83675
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1339H09 Length = 131136 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcg 124 ||||| ||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 124381 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacggcg 124333 Score = 50.1 bits (25), Expect = 0.006 Identities = 48/55 (87%), Gaps = 3/55 (5%) Strand = Plus / Minus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||| ||||||||||||| ||||||| ||||||||||||||| || |||||| Sbjct: 124238 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacagcgccg 124187
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1040D06 Length = 155034 Score = 52.0 bits (26), Expect = 0.001 Identities = 46/52 (88%), Gaps = 3/52 (5%) Strand = Plus / Minus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcg 124 ||||| ||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 85079 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacggcg 85031 Score = 50.1 bits (25), Expect = 0.006 Identities = 48/55 (87%), Gaps = 3/55 (5%) Strand = Plus / Minus Query: 73 atggccccctccctcctcgccgccgccacctcgcccttcctcctccacggcgccg 127 ||||| ||||||||||||| ||||||| ||||||||||||||| || |||||| Sbjct: 84936 atggcgccctccctcctcgacgccgcc---tcgcccttcctcctctacagcgccg 84885
>gb|BT012852.1| Lycopersicon esculentum clone 113931R, mRNA sequence Length = 622 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Plus Query: 271 gagaaatctgctgggggagttctgctaccgaaatc 305 |||||||||||||| |||||| |||| |||||||| Sbjct: 222 gagaaatctgctggtggagttttgcttccgaaatc 256
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 182 ccgtgcgcgtgcgcgccgccatc 204 ||||||||||||||||||||||| Sbjct: 244493 ccgtgcgcgtgcgcgccgccatc 244515
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 80 cctccctcctcgccgccgccacc 102 ||||||||||||||||||||||| Sbjct: 4384274 cctccctcctcgccgccgccacc 4384296 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 cccctccctcctcgccgccgccacc 102 |||||| |||||||||||||||||| Sbjct: 33816140 cccctcgctcctcgccgccgccacc 33816116 Score = 40.1 bits (20), Expect = 5.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 82 tccctcctcgccgccg-ccacctcgccc 108 |||||||||||||||| ||||||||||| Sbjct: 20723849 tccctcctcgccgccgaccacctcgccc 20723822
>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544B02 Length = 156339 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 80 cctccctcctcgccgccgccacc 102 ||||||||||||||||||||||| Sbjct: 67838 cctccctcctcgccgccgccacc 67860
>dbj|AK058557.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-D05, full insert sequence Length = 1064 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 80 cctccctcctcgccgccgccacc 102 ||||||||||||||||||||||| Sbjct: 90 cctccctcctcgccgccgccacc 112
>gb|AF342811.1|AF342811 Bos taurus mannose-6-phosphate/insulin-like growth factor II receptor (m6p/igf2r) mRNA, complete cds Length = 9075 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 ccggtcgccgcccccggccgccgcgc 173 |||| ||||||||||||||||||||| Sbjct: 85 ccggacgccgcccccggccgccgcgc 110
>ref|NM_174352.2| Bos taurus insulin-like growth factor 2 receptor (IGF2R), mRNA Length = 9075 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 ccggtcgccgcccccggccgccgcgc 173 |||| ||||||||||||||||||||| Sbjct: 85 ccggacgccgcccccggccgccgcgc 110
>gb|J03527.1|BOVCMPR Bovine cation-independent mannose 6-phosphate receptor protein mRNA, complete cds Length = 7913 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 148 ccggtcgccgcccccggccgccgcgc 173 |||| ||||||||||||||||||||| Sbjct: 85 ccggacgccgcccccggccgccgcgc 110
>ref|NM_188024.1| Oryza sativa (japonica cultivar-group), Ozsa8444 predicted mRNA Length = 1152 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 ccccctccctcctcgccgccgccac 101 |||||||||||||| |||||||||| Sbjct: 292 ccccctccctcctccccgccgccac 268
>ref|XM_511864.1| PREDICTED: Pan troglodytes arachidonate 12-lipoxygenase, 12R type (LOC455103), mRNA Length = 2154 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 gccgccgccacctcgcccttcctcc 115 ||||| ||||||||||||||||||| Sbjct: 1885 gccgcagccacctcgcccttcctcc 1909
>ref|XM_475602.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1362 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 cctccctcctcgccgccgccacctc 104 |||||||||||||||||||| |||| Sbjct: 17 cctccctcctcgccgccgcctcctc 41
>ref|XM_468249.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3944 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 cccctccctcctcgccgccgccacc 102 |||||| |||||||||||||||||| Sbjct: 284 cccctcgctcctcgccgccgccacc 260
>ref|NM_197425.1| Oryza sativa (japonica cultivar-group) putative reverse transcriptase (OSJNBa0096G08.13), mRNA Length = 1692 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 cctcgccgccgccacctcgcc 107 ||||||||||||||||||||| Sbjct: 311 cctcgccgccgccacctcgcc 331
>ref|NM_192618.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 483 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 85 ctcctcgccgccgccacctcgcccttcctcctc 117 ||||||||||||||| || ||| |||||||||| Sbjct: 31 ctcctcgccgccgccgccgcgctcttcctcctc 63
>gb|AF061032.1| Homo sapiens cosmid 223D9 from Xq28, complete sequence Length = 37581 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 cgccacctcgcccttcctcct 116 ||||||||||||||||||||| Sbjct: 11873 cgccacctcgcccttcctcct 11853
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 cctcgccgccgccacctcgcc 107 ||||||||||||||||||||| Sbjct: 80648 cctcgccgccgccacctcgcc 80628
>gb|AC104283.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1607_F09, complete sequence Length = 95755 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 cctccctcctcgccgccgccacctc 104 |||||||||||||||||||| |||| Sbjct: 9731 cctccctcctcgccgccgcctcctc 9707
>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04, complete sequence Length = 133271 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 cctccctcctcgccgccgccacctc 104 |||||||||||||||||||| |||| Sbjct: 118309 cctccctcctcgccgccgcctcctc 118285
>ref|XM_987300.1| PREDICTED: Mus musculus hypothetical protein LOC671473 (LOC671473), mRNA Length = 348 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 cgccgcccccggccgccgcgccgca 177 ||||||||||| ||||||||||||| Sbjct: 204 cgccgcccccgcccgccgcgccgca 228
>ref|XM_001000679.1| PREDICTED: Mus musculus hypothetical protein LOC668287 (LOC668287), mRNA Length = 780 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 cgccgcccccggccgccgcgccgca 177 ||||||||||| ||||||||||||| Sbjct: 203 cgccgcccccgcccgccgcgccgca 227
>emb|CT025632.2| Pan troglodytes chromosome X clone PTB-029A18 map Xq28, complete sequence Length = 144091 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 cgccacctcgcccttcctcct 116 ||||||||||||||||||||| Sbjct: 127494 cgccacctcgcccttcctcct 127474
>gb|AC092720.4| Homo sapiens chromosome 16 clone RP11-482M8, complete sequence Length = 169214 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 aggccggtcgccgcccccggccgcc 169 |||||| |||||||||||||||||| Sbjct: 22937 aggccgctcgccgcccccggccgcc 22913
>gb|BC083587.1| Rattus norvegicus Yip1 domain family, member 2, mRNA (cDNA clone MGC:94285 IMAGE:7131986), complete cds Length = 1977 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 ctccgtgcgcgtgcgcgccgc 200 ||||||||||||||||||||| Sbjct: 51 ctccgtgcgcgtgcgcgccgc 31
>ref|NM_001014208.1| Rattus norvegicus Yip1 domain family, member 2 (Yipf2), mRNA Length = 1977 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 ctccgtgcgcgtgcgcgccgc 200 ||||||||||||||||||||| Sbjct: 51 ctccgtgcgcgtgcgcgccgc 31
>gb|AC107913.7| Homo sapiens chromosome 17, clone CTD-3051C7, complete sequence Length = 128953 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 gccgccgccacctcgcccttcctcc 115 ||||| ||||||||||||||||||| Sbjct: 58173 gccgcagccacctcgcccttcctcc 58197
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ccccctccctcctcgccgccg 97 ||||||||||||||||||||| Sbjct: 25315078 ccccctccctcctcgccgccg 25315058
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 80 cctccctcctcgccgccgccacctc 104 |||||||||||||||||||| |||| Sbjct: 2442709 cctccctcctcgccgccgcctcctc 2442685 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cgccgccgccacctcgccct 109 |||||||||||||||||||| Sbjct: 20052968 cgccgccgccacctcgccct 20052987 Score = 40.1 bits (20), Expect = 5.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 91 gccgccgccacctcgcccttcctcctcc 118 |||||||||||||| ||||||||||||| Sbjct: 7275059 gccgccgccacctc-cccttcctcctcc 7275085
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase, polyketide synthase type Is, acyl transferase, membrane protein, ABC transporter, sugar dehydratase/epimerase, sugar epimerase, sugar nucleotidyltransferase, sugar dehydratase/epimerase, thioesterase, acyl CoA ligase, amine oxidase, phosphopantetheinyl transferase, transcriptional regulator, carboxylase/carboxyltransferase, amidinohydrolase, amide synthetase, 5-aminolevulinate synthase, and acyl CoA ligase genes, complete cds; and unknown gene Length = 161719 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 cagccgcaggccggtcgccgc 158 ||||||||||||||||||||| Sbjct: 137053 cagccgcaggccggtcgccgc 137033
>gb|AF274573.4| Homo sapiens chromosome X clone RP11-316K19, RP11-316M19, RP4-687A5 map q28, complete sequence Length = 189436 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 cgccacctcgcccttcctcct 116 ||||||||||||||||||||| Sbjct: 148456 cgccacctcgcccttcctcct 148436
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 ccccctccctcctcgccgccgccac 101 |||||||||||||| |||||||||| Sbjct: 91922 ccccctccctcctccccgccgccac 91898
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 85 ctcctcgccgccgccacctcgcccttcctcctc 117 ||||||||||||||| || ||| |||||||||| Sbjct: 54933 ctcctcgccgccgccgccgcgctcttcctcctc 54965
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 85 ctcctcgccgccgccacctcgcccttcctcctc 117 ||||||||||||||| || ||| |||||||||| Sbjct: 115977 ctcctcgccgccgccgccgcgctcttcctcctc 116009
>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0505A04 Length = 159241 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ccccctccctcctcgccgccg 97 ||||||||||||||||||||| Sbjct: 133686 ccccctccctcctcgccgccg 133666
>gb|AC153911.5| Mus musculus 10 BAC RP23-182J19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219859 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 cgccgcccccggccgccgcgccgca 177 ||||||||||| ||||||||||||| Sbjct: 54264 cgccgcccccgcccgccgcgccgca 54240
>dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1695_H09 Length = 114721 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 cccctccctcctcgccgccgccacc 102 |||||| |||||||||||||||||| Sbjct: 32718 cccctcgctcctcgccgccgccacc 32694
>dbj|AK120097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022C03, full insert sequence Length = 3942 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 cccctccctcctcgccgccgccacc 102 |||||| |||||||||||||||||| Sbjct: 283 cccctcgctcctcgccgccgccacc 259
>dbj|AK099030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126M11, full insert sequence Length = 1756 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 cctccctcctcgccgccgccacctc 104 |||||||||||||||||||| |||| Sbjct: 163 cctccctcctcgccgccgcctcctc 187
>dbj|AK072841.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143G06, full insert sequence Length = 1728 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 80 cctccctcctcgccgccgccacctc 104 |||||||||||||||||||| |||| Sbjct: 167 cctccctcctcgccgccgcctcctc 191
>dbj|AK069334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010O20, full insert sequence Length = 779 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 85 ctcctcgccgccgccacctcgcccttcctcctc 117 ||||||||||||||| || ||| |||||||||| Sbjct: 102 ctcctcgccgccgccgccgcgctcttcctcctc 134
>dbj|AK068184.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133H08, full insert sequence Length = 887 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 85 ctcctcgccgccgccacctcgcccttcctcctc 117 ||||||||||||||| || ||| |||||||||| Sbjct: 102 ctcctcgccgccgccgccgcgctcttcctcctc 134
>gb|BC089776.1| Rattus norvegicus glutaminase 2 (liver, mitochondrial), mRNA (cDNA clone IMAGE:7326030), partial cds Length = 2391 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 cccctccctcctcgccgccgc 98 ||||||||||||||||||||| Sbjct: 9 cccctccctcctcgccgccgc 29
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 ccgcccccggccgccgcgccg 175 ||||||||||||||||||||| Sbjct: 61381 ccgcccccggccgccgcgccg 61361
>gb|AC135859.4| Mus musculus BAC clone RP24-151D9 from 10, complete sequence Length = 182809 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cccctccctcctcgccgccgc 98 ||||||||||||||||||||| Sbjct: 112817 cccctccctcctcgccgccgc 112797
>gb|AC153021.2| Mus musculus 10 BAC RP23-37G3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187132 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 cgccgcccccggccgccgcgccgca 177 ||||||||||| ||||||||||||| Sbjct: 58318 cgccgcccccgcccgccgcgccgca 58342
>ref|XM_466153.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1190 Score = 40.1 bits (20), Expect = 5.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 82 tccctcctcgccgccg-ccacctcgccc 108 |||||||||||||||| ||||||||||| Sbjct: 453 tccctcctcgccgccgaccacctcgccc 480
>ref|NM_196376.1| Oryza sativa (japonica cultivar-group) putative selenium-binding protein-like (OSJNBa0050N08.17), mRNA Length = 1956 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cctccctcctcgccgccgcc 99 |||||||||||||||||||| Sbjct: 128 cctccctcctcgccgccgcc 147
>ref|XM_463596.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1614 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccgccgcgccgcatcctccg 184 |||||||||||||||||||| Sbjct: 765 ccgccgcgccgcatcctccg 784
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cctccctcctcgccgccgcc 99 |||||||||||||||||||| Sbjct: 87291 cctccctcctcgccgccgcc 87272
>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10, complete sequence Length = 149870 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cgccgccgccacctcgccct 109 |||||||||||||||||||| Sbjct: 51293 cgccgccgccacctcgccct 51312
>ref|XM_876773.1| PREDICTED: Bos taurus hypothetical protein LOC614267 (LOC614267), mRNA Length = 528 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 76 gccccctccctcctcgccgccgccacctcgcc 107 |||||||||| || ||||||||||||||||| Sbjct: 277 gccccctccccccgggccgccgccacctcgcc 308
>ref|XM_611933.2| PREDICTED: Bos taurus similar to BTB (POZ) domain containing 15, transcript variant 3 (LOC540532), mRNA Length = 1966 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 76 gccccctccctcctcgccgccgccacctcgcc 107 |||||||||| || ||||||||||||||||| Sbjct: 106 gccccctccccccgggccgccgccacctcgcc 137
>ref|XM_872189.1| PREDICTED: Bos taurus similar to BTB (POZ) domain containing 15, transcript variant 5 (LOC540532), mRNA Length = 1990 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 76 gccccctccctcctcgccgccgccacctcgcc 107 |||||||||| || ||||||||||||||||| Sbjct: 106 gccccctccccccgggccgccgccacctcgcc 137
>ref|XM_864070.1| PREDICTED: Bos taurus similar to BTB (POZ) domain containing 15, transcript variant 4 (LOC540532), mRNA Length = 2160 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 76 gccccctccctcctcgccgccgccacctcgcc 107 |||||||||| || ||||||||||||||||| Sbjct: 106 gccccctccccccgggccgccgccacctcgcc 137
>ref|XM_953289.1| Neurospora crassa OR74A hypothetical protein (NCU09858.1) partial mRNA Length = 1398 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 tccttccaatggccccctccctcc 88 ||||||||||||| |||||||||| Sbjct: 331 tccttccaatggctccctccctcc 354
>ref|XM_330779.1| Neurospora crassa OR74A hypothetical protein (NCU09858.1) partial mRNA Length = 1398 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 tccttccaatggccccctccctcc 88 ||||||||||||| |||||||||| Sbjct: 331 tccttccaatggctccctccctcc 354
>gb|AC146716.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1003C08, complete sequence Length = 152527 Score = 40.1 bits (20), Expect = 5.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 91 gccgccgccacctcgcccttcctcctcc 118 |||||||||||||| ||||||||||||| Sbjct: 13314 gccgccgccacctc-cccttcctcctcc 13340
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cgccgccgccacctcgccct 109 |||||||||||||||||||| Sbjct: 16677917 cgccgccgccacctcgccct 16677936
>gb|AC137871.18| Mus musculus chromosome 15, clone RP23-41B9, complete sequence Length = 223529 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 gccgccgccacctcgcccttcctc 114 |||||||||||||| ||||||||| Sbjct: 123582 gccgccgccacctctcccttcctc 123559
>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster Length = 109528 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cagccgcaggccggtcgccg 157 |||||||||||||||||||| Sbjct: 22765 cagccgcaggccggtcgccg 22746
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 tcctccgtgcgcgtgcgcgc 197 |||||||||||||||||||| Sbjct: 480465 tcctccgtgcgcgtgcgcgc 480484
>gb|AC113433.8| Oryza sativa chromosome 3 BAC OSJNBb0108E08 genomic sequence, complete sequence Length = 129167 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cgccgccgccacctcgccct 109 |||||||||||||||||||| Sbjct: 28710 cgccgccgccacctcgccct 28729
>emb|AJ843080.1| Streptomyces fradiae neomycin biosynthetic gene cluster, strain MCIMB 8233 Length = 30837 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cgccgcccccggccgccgcg 172 |||||||||||||||||||| Sbjct: 24754 cgccgcccccggccgccgcg 24735
>gb|AC016885.16| Homo sapiens chromosome 8, clone RP11-388K12, complete sequence Length = 210008 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 gtgaagttgaagctggaaag 384 |||||||||||||||||||| Sbjct: 3671 gtgaagttgaagctggaaag 3690
>ref|XM_969467.1| PREDICTED: Tribolium castaneum similar to CG17248-PA, isoform A (LOC663421), mRNA Length = 606 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 gtcgccgcccccggccgccg 170 |||||||||||||||||||| Sbjct: 135 gtcgccgcccccggccgccg 116
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 cgccgcccccggccgccgcgccgc 176 |||||| ||||||||||||||||| Sbjct: 1005060 cgccgctcccggccgccgcgccgc 1005037
>gb|AC131951.1| Homo sapiens BAC clone RP11-452L12 from 4, complete sequence Length = 138872 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 taaatttgagagatatttga 331 |||||||||||||||||||| Sbjct: 102727 taaatttgagagatatttga 102708
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ccctcctcgccgccgccacc 102 |||||||||||||||||||| Sbjct: 300487 ccctcctcgccgccgccacc 300468
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 gagcaccagccgcaggccgg 151 |||||||||||||||||||| Sbjct: 262265 gagcaccagccgcaggccgg 262246
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 cccccggccgccgcgccgca 177 |||||||||||||||||||| Sbjct: 75813 cccccggccgccgcgccgca 75832
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cctccctcctcgccgccgcc 99 |||||||||||||||||||| Sbjct: 95808 cctccctcctcgccgccgcc 95789
>emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encoding rifamycin polyketide synthases, ORFs 1 to 5 Length = 53784 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cagccgcaggccggtcgccg 157 |||||||||||||||||||| Sbjct: 6360 cagccgcaggccggtcgccg 6341
>gb|AC114797.5| Homo sapiens BAC clone RP11-704M14 from 4, complete sequence Length = 43323 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 aatctgctgttaaatttgag 321 |||||||||||||||||||| Sbjct: 14002 aatctgctgttaaatttgag 13983
>gb|AC022825.9| Homo sapiens chromosome 8, clone RP11-88J22, complete sequence Length = 191772 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 gtgaagttgaagctggaaag 384 |||||||||||||||||||| Sbjct: 168191 gtgaagttgaagctggaaag 168210
>dbj|AK124272.1| Homo sapiens cDNA FLJ42278 fis, clone TLIVE2002562 Length = 2648 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 aatctgctgttaaatttgag 321 |||||||||||||||||||| Sbjct: 2321 aatctgctgttaaatttgag 2302
>gb|AC114786.4| Homo sapiens BAC clone RP11-618I10 from 4, complete sequence Length = 148977 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 aatctgctgttaaatttgag 321 |||||||||||||||||||| Sbjct: 144016 aatctgctgttaaatttgag 144035 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 aatctgctgttaaatttgag 321 |||||||||||||||||||| Sbjct: 35027 aatctgctgttaaatttgag 35046
>dbj|AB211959.1| Streptomyces fradiae orf6, neoU, neoT, neoS, neoR, neoA, neoB, neoC, neoD, neoE, neoF, neoG, neoH, neoI, neoJ, neoK, neoL, neoM, neoN, neoO, neoP, neoQ, orf1, orf2, orf3, orf4, orf5 genes, complete and partial cds Length = 39237 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cgccgcccccggccgccgcg 172 |||||||||||||||||||| Sbjct: 28571 cgccgcccccggccgccgcg 28552
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 ctcgagactatcccagagaa 275 |||||||||||||||||||| Sbjct: 1134339 ctcgagactatcccagagaa 1134320
>gb|AC108078.3| Homo sapiens BAC clone RP11-790I12 from 4, complete sequence Length = 103343 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 aatctgctgttaaatttgag 321 |||||||||||||||||||| Sbjct: 16390 aatctgctgttaaatttgag 16409
>gb|AC096755.2| Homo sapiens BAC clone RP11-519M16 from 4, complete sequence Length = 182440 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 aagttgaagctggaaagaag 387 |||||||||||||||||||| Sbjct: 27748 aagttgaagctggaaagaag 27729
>gb|AC008453.6| Homo sapiens chromosome 5 clone CTC-345K18, complete sequence Length = 145064 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ccctcctcgccgccgccacc 102 |||||||||||||||||||| Sbjct: 96086 ccctcctcgccgccgccacc 96105
>gb|AF421185.1|AF421185 Bos taurus lysyl oxidase-like 1 (Loxl1) mRNA, complete cds Length = 1917 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ctcctcgccgccgccacctc 104 |||||||||||||||||||| Sbjct: 856 ctcctcgccgccgccacctc 837
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 ggccggtcgccgcccccggccgcc 169 ||||||||||||||| |||||||| Sbjct: 2012774 ggccggtcgccgcccacggccgcc 2012797
>gb|AC182428.2| Pan troglodytes BAC clone CH251-637G21 from chromosome 4, complete sequence Length = 210098 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 aatctgctgttaaatttgag 321 |||||||||||||||||||| Sbjct: 153760 aatctgctgttaaatttgag 153779
>emb|CR407402.1| Gallus gallus finished cDNA, clone ChEST269c21 Length = 612 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 153 cgccgcccccggccgccgcgccgcatcctccg 184 ||||||| ||| |||||||||||| ||||||| Sbjct: 41 cgccgccaccgcccgccgcgccgcctcctccg 10
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cctccctcctcgccgccgcc 99 |||||||||||||||||||| Sbjct: 34184426 cctccctcctcgccgccgcc 34184407
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cgccgccgccacctcgccct 109 |||||||||||||||||||| Sbjct: 25112641 cgccgccgccacctcgccct 25112660
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cgccgccgccacctcgccct 109 |||||||||||||||||||| Sbjct: 16671550 cgccgccgccacctcgccct 16671569
>gb|AC023351.8| Homo sapiens BAC clone RP11-637J20 from 2, complete sequence Length = 17928 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccacctcgcccttcctcctc 117 |||||||||||||||||||| Sbjct: 9133 ccacctcgcccttcctcctc 9114
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccgccgcgccgcatcctccg 184 |||||||||||||||||||| Sbjct: 83455 ccgccgcgccgcatcctccg 83474
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cctcctccacggcgccgtcg 130 |||||||||||||||||||| Sbjct: 2425928 cctcctccacggcgccgtcg 2425947
>gb|AC105046.10| Homo sapiens chromosome 8, clone CTD-3247F14, complete sequence Length = 87734 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 gaagctggaaagaaggttct 392 |||||||||||||||||||| Sbjct: 38605 gaagctggaaagaaggttct 38586
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 cgccgcccccggccgccgcgccgc 176 ||||||| |||||||||||||||| Sbjct: 1214192 cgccgccgccggccgccgcgccgc 1214215
>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G11 Length = 167168 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gccccctccctcctcgccgccgcc 99 |||||||||| ||||||||||||| Sbjct: 135279 gccccctcccccctcgccgccgcc 135302
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cgccgcccccggccgccgcg 172 |||||||||||||||||||| Sbjct: 13523 cgccgcccccggccgccgcg 13504
>dbj|AP004775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0451A10 Length = 137046 Score = 40.1 bits (20), Expect = 5.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 82 tccctcctcgccgccg-ccacctcgccc 108 |||||||||||||||| ||||||||||| Sbjct: 74955 tccctcctcgccgccgaccacctcgccc 74928
>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121563 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 cgccgccgccacctcgccct 109 |||||||||||||||||||| Sbjct: 18838 cgccgccgccacctcgccct 18819
>emb|BX572082.4| Mouse DNA sequence from clone RP23-114B24 on chromosome X, complete sequence Length = 88681 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ccaccagcatcctccttcca 72 |||||||||||||||||||| Sbjct: 66883 ccaccagcatcctccttcca 66864
>ref|NM_174383.2| Bos taurus lysyl oxidase-like 1 (LOXL1), mRNA Length = 1917 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ctcctcgccgccgccacctc 104 |||||||||||||||||||| Sbjct: 856 ctcctcgccgccgccacctc 837
>dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0040I22 Length = 134273 Score = 40.1 bits (20), Expect = 5.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 82 tccctcctcgccgccg-ccacctcgccc 108 |||||||||||||||| ||||||||||| Sbjct: 120704 tccctcctcgccgccgaccacctcgccc 120677
>dbj|AK108298.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-E09, full insert sequence Length = 1190 Score = 40.1 bits (20), Expect = 5.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 82 tccctcctcgccgccg-ccacctcgccc 108 |||||||||||||||| ||||||||||| Sbjct: 453 tccctcctcgccgccgaccacctcgccc 480
>dbj|AK069249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019G02, full insert sequence Length = 1094 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cctccctcctcgccgccgcc 99 |||||||||||||||||||| Sbjct: 101 cctccctcctcgccgccgcc 120
>dbj|AK066276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061P22, full insert sequence Length = 3162 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cgccgccgccacctcgccct 109 |||||||||||||||||||| Sbjct: 87 cgccgccgccacctcgccct 106
>dbj|AK065862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044F03, full insert sequence Length = 3873 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gccccctccctcctcgccgccgcc 99 |||||||||| ||||||||||||| Sbjct: 6 gccccctcccccctcgccgccgcc 29
>emb|BX276085.8| Zebrafish DNA sequence from clone CH211-194B5 in linkage group 19, complete sequence Length = 202683 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 aaatttgagagatatttgat 332 |||||||||||||||||||| Sbjct: 189167 aaatttgagagatatttgat 189186
>dbj|AK061020.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-C09, full insert sequence Length = 1497 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 cgccgccgccacctcgccct 109 |||||||||||||||||||| Sbjct: 1015 cgccgccgccacctcgccct 996
>dbj|AK058277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-C06, full insert sequence Length = 1571 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cgccgccgccacctcgccct 109 |||||||||||||||||||| Sbjct: 201 cgccgccgccacctcgccct 220
>emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete sequence Length = 101125 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cctccctcctcgccgccgcc 99 |||||||||||||||||||| Sbjct: 35107 cctccctcctcgccgccgcc 35088
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 ccagccgcaggccggtcgccgccc 160 ||||| |||||||||||||||||| Sbjct: 6027346 ccagcagcaggccggtcgccgccc 6027369
>emb|AJ629247.1| Streptomyces fradiae neomycin biosynthesis gene cluster, strain DSM 40063 Length = 50466 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cgccgcccccggccgccgcg 172 |||||||||||||||||||| Sbjct: 33303 cgccgcccccggccgccgcg 33284
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 cgccgccgccacctcgccct 109 |||||||||||||||||||| Sbjct: 25040817 cgccgccgccacctcgccct 25040836
>emb|AL731743.2|CNS08C7S Oryza sativa chromosome 12, . BAC OSJNBa0001B02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 93872 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 cgccgccgccacctcgccct 109 |||||||||||||||||||| Sbjct: 88422 cgccgccgccacctcgccct 88403 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,019,600 Number of Sequences: 3902068 Number of extensions: 4019600 Number of successful extensions: 165342 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 161488 Number of HSP's gapped (non-prelim): 3941 length of query: 404 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 382 effective length of database: 17,147,199,772 effective search space: 6550230312904 effective search space used: 6550230312904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
