ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast18h10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor (Po... 134 4e-32
2PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor (Po... 55 4e-08
3PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor (Po... 55 5e-08
4PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor (Po... 55 5e-08
5PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor (Po... 50 1e-06
6PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor (Polyg... 50 1e-06
7PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor (Po... 50 2e-06
8EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 37 0.011
9DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100... 35 0.042
10BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 34 0.072
11TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precur... 32 0.36
12PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog) 28 4.0
13GP46_LEIAM (P21978) Surface membrane glycoprotein GP46/M-2 precu... 28 5.2
14YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in... 27 8.8

>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (Floral organ
           regulator 1)
          Length = 332

 Score =  134 bits (338), Expect = 4e-32
 Identities = 61/73 (83%), Positives = 68/73 (93%)
 Frame = +3

Query: 192 RCPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHG 371
           RCP +D+QAL+RVKQ+LGNPATL TWS ASADCC WDH+RCDEAGRVNNVFIDGA+DV G
Sbjct: 26  RCPPSDKQALMRVKQSLGNPATLSTWSLASADCCEWDHVRCDEAGRVNNVFIDGANDVRG 85

Query: 372 QIPSALAGLTALM 410
           QIPSA+AGLTALM
Sbjct: 86  QIPSAVAGLTALM 98



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>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2)
          Length = 342

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 359
           C   D+QALL++K+ LGNP TL +W P + DCC  TW  + CD   +  RVNN+ + G +
Sbjct: 32  CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLN 90

Query: 360 -DVHGQIPSALAGLTAL 407
                 IPS+LA L  L
Sbjct: 91  LPKPYPIPSSLANLPYL 107



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>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3)
          Length = 342

 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 359
           C   D+QALL++K+ LGNP TL +W P + DCC  TW  + CD   +  RVNN+ + G +
Sbjct: 32  CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90

Query: 360 -DVHGQIPSALAGLTAL 407
                 IPS+LA L  L
Sbjct: 91  LPKPYPIPSSLANLPYL 107



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>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-1)
          Length = 342

 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 359
           C   D+QALL++K+ LGNP TL +W P + DCC  TW  + CD   +  RVNN+ + G +
Sbjct: 32  CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90

Query: 360 -DVHGQIPSALAGLTAL 407
                 IPS+LA L  L
Sbjct: 91  LPKPYPIPSSLANLPYL 107



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>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-2)
          Length = 330

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFI-DGADD 362
           C + D+  LL++K++L NP  L +W P   DCC+W  L C +A    RV ++ I DG  +
Sbjct: 25  CHKDDKTTLLKIKKSLNNPYHLASWDP-KTDCCSWYCLECGDATVNHRVTSLIIQDG--E 81

Query: 363 VHGQIPSALAGLTAL 407
           + GQIP  +  L  L
Sbjct: 82  ISGQIPPEVGDLPYL 96



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>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor|
           (Polygalacturonase-inhibiting protein)
          Length = 330

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDE-AGRVNNVFIDGADDVHG 371
           C   D++ LL++K+A G+P  L +W  +  DCC W  + CD    R+N++ I  A  V G
Sbjct: 27  CNPDDKKVLLQIKKAFGDPYVLASWK-SDTDCCDWYCVTCDSTTNRINSLTI-FAGQVSG 84

Query: 372 QIPSALAGLTAL 407
           QIP+ +  L  L
Sbjct: 85  QIPALVGDLPYL 96



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>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-1)
          Length = 330

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFIDGADDV 365
           C Q D+  LL++K++L NP  L +W P   DCC+W  L C +A    RV  + I  +  +
Sbjct: 25  CNQNDKNTLLKIKKSLNNPYHLASWDP-QTDCCSWYCLECGDATVNHRVTALTI-FSGQI 82

Query: 366 HGQIPSALAGLTAL 407
            GQIP+ +  L  L
Sbjct: 83  SGQIPAEVGDLPYL 96



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
 Frame = +3

Query: 204 ADRQALLRVKQALGNPATLKTWS-PASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIP 380
           ++  +L+  K++L NP+ L +W+  +SA  C W  + C   GRVN++ +     + GQIP
Sbjct: 25  SETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTC-LLGRVNSLSLPSL-SLRGQIP 82

Query: 381 SALAGLTAL 407
             ++ L  L
Sbjct: 83  KEISSLKNL 91



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>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor|
          Length = 372

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 15/86 (17%)
 Frame = +3

Query: 195 CPQADRQALLRVKQALGNP--ATLKTWSPASADCCTWDHLRCD-EAGRVNNVFIDGADD- 362
           C   D+ AL   K +L  P      TWS  +  C  W  + CD ++GRV ++ + G  + 
Sbjct: 27  CSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISLRGESED 86

Query: 363 -----------VHGQIPSALAGLTAL 407
                      + G I  A+  LTAL
Sbjct: 87  AIFQKAGRSGYMSGSIDPAVCDLTAL 112



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 34.3 bits (77), Expect = 0.072
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +3

Query: 204 ADRQALLRVKQALGNP-ATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIP 380
           A+  AL  +K +L +P   L++W       CTW H+ C+    V  V +  A ++ GQ+ 
Sbjct: 27  AEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNA-NLSGQLV 85

Query: 381 SALAGLTAL 407
             L  L  L
Sbjct: 86  MQLGQLPNL 94



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>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 22/67 (32%), Positives = 32/67 (47%)
 Frame = +3

Query: 207 DRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIPSA 386
           D  A+L +K++L NP +   WS    D C W H+ C    RV  + I G   + G +   
Sbjct: 28  DLSAMLSLKKSL-NPPSSFGWS--DPDPCKWTHIVCTGTKRVTRIQI-GHSGLQGTLSPD 83

Query: 387 LAGLTAL 407
           L  L+ L
Sbjct: 84  LRNLSEL 90



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>PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)|
          Length = 2341

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -3

Query: 379  GIWPCTSSAPSMKTLFTRPASSHRRWSHVQQSADAGDHVFSVA--GLPSACFTRSSACRS 206
            G  PC  S+ S  +L   P+S   R S V Q   +G    +    GLPS+  + SS    
Sbjct: 2144 GFVPCRRSSTSQISLRNLPSSIQSRLSMVNQMEPSGQSGLACVQHGLPSS--SSSSQSIP 2201

Query: 205  ACGH 194
            AC H
Sbjct: 2202 ACKH 2205



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>GP46_LEIAM (P21978) Surface membrane glycoprotein GP46/M-2 precursor|
          Length = 476

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 204 ADRQALLRVKQALGN--PATLKTWSPASADCCTWDHLRCDEAG 326
           A ++  L V QA     PA   TW+   +D C+W+H+ C  +G
Sbjct: 41  AQQKNTLTVLQAFARAIPALGDTWT--GSDFCSWEHIICYSSG 81



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>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I|
          Length = 536

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -3

Query: 406 SAVSPAKADGIWPCTSSAPSMKTLFTRPASSHRRWSHVQQSA-DAGDHVFSVAGLPSACF 230
           S +S + A  I   +SS+P   + FT PASS    S V  S+  +     S+    SA  
Sbjct: 47  SMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSSATL 106

Query: 229 TRSSA 215
           T SS+
Sbjct: 107 TSSSS 111


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,341,494
Number of Sequences: 219361
Number of extensions: 344440
Number of successful extensions: 1336
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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