| Clone Name | bast18h10 |
|---|---|
| Clone Library Name | barley_pub |
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 134 bits (338), Expect = 4e-32 Identities = 61/73 (83%), Positives = 68/73 (93%) Frame = +3 Query: 192 RCPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHG 371 RCP +D+QAL+RVKQ+LGNPATL TWS ASADCC WDH+RCDEAGRVNNVFIDGA+DV G Sbjct: 26 RCPPSDKQALMRVKQSLGNPATLSTWSLASADCCEWDHVRCDEAGRVNNVFIDGANDVRG 85 Query: 372 QIPSALAGLTALM 410 QIPSA+AGLTALM Sbjct: 86 QIPSAVAGLTALM 98
>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 342 Score = 55.1 bits (131), Expect = 4e-08 Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 359 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G + Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLN 90 Query: 360 -DVHGQIPSALAGLTAL 407 IPS+LA L L Sbjct: 91 LPKPYPIPSSLANLPYL 107
>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) Length = 342 Score = 54.7 bits (130), Expect = 5e-08 Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 359 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G + Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90 Query: 360 -DVHGQIPSALAGLTAL 407 IPS+LA L L Sbjct: 91 LPKPYPIPSSLANLPYL 107
>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 342 Score = 54.7 bits (130), Expect = 5e-08 Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 6/77 (7%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 359 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G + Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90 Query: 360 -DVHGQIPSALAGLTAL 407 IPS+LA L L Sbjct: 91 LPKPYPIPSSLANLPYL 107
>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 330 Score = 50.4 bits (119), Expect = 1e-06 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFI-DGADD 362 C + D+ LL++K++L NP L +W P DCC+W L C +A RV ++ I DG + Sbjct: 25 CHKDDKTTLLKIKKSLNNPYHLASWDP-KTDCCSWYCLECGDATVNHRVTSLIIQDG--E 81 Query: 363 VHGQIPSALAGLTAL 407 + GQIP + L L Sbjct: 82 ISGQIPPEVGDLPYL 96
>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor| (Polygalacturonase-inhibiting protein) Length = 330 Score = 50.1 bits (118), Expect = 1e-06 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDE-AGRVNNVFIDGADDVHG 371 C D++ LL++K+A G+P L +W + DCC W + CD R+N++ I A V G Sbjct: 27 CNPDDKKVLLQIKKAFGDPYVLASWK-SDTDCCDWYCVTCDSTTNRINSLTI-FAGQVSG 84 Query: 372 QIPSALAGLTAL 407 QIP+ + L L Sbjct: 85 QIPALVGDLPYL 96
>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 330 Score = 49.7 bits (117), Expect = 2e-06 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 3/74 (4%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFIDGADDV 365 C Q D+ LL++K++L NP L +W P DCC+W L C +A RV + I + + Sbjct: 25 CNQNDKNTLLKIKKSLNNPYHLASWDP-QTDCCSWYCLECGDATVNHRVTALTI-FSGQI 82 Query: 366 HGQIPSALAGLTAL 407 GQIP+ + L L Sbjct: 83 SGQIPAEVGDLPYL 96
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 37.0 bits (84), Expect = 0.011 Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 1/69 (1%) Frame = +3 Query: 204 ADRQALLRVKQALGNPATLKTWS-PASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIP 380 ++ +L+ K++L NP+ L +W+ +SA C W + C GRVN++ + + GQIP Sbjct: 25 SETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTC-LLGRVNSLSLPSL-SLRGQIP 82 Query: 381 SALAGLTAL 407 ++ L L Sbjct: 83 KEISSLKNL 91
>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor| Length = 372 Score = 35.0 bits (79), Expect = 0.042 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 15/86 (17%) Frame = +3 Query: 195 CPQADRQALLRVKQALGNP--ATLKTWSPASADCCTWDHLRCD-EAGRVNNVFIDGADD- 362 C D+ AL K +L P TWS + C W + CD ++GRV ++ + G + Sbjct: 27 CSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSGRVTDISLRGESED 86 Query: 363 -----------VHGQIPSALAGLTAL 407 + G I A+ LTAL Sbjct: 87 AIFQKAGRSGYMSGSIDPAVCDLTAL 112
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 34.3 bits (77), Expect = 0.072 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = +3 Query: 204 ADRQALLRVKQALGNP-ATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIP 380 A+ AL +K +L +P L++W CTW H+ C+ V V + A ++ GQ+ Sbjct: 27 AEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNA-NLSGQLV 85 Query: 381 SALAGLTAL 407 L L L Sbjct: 86 MQLGQLPNL 94
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 32.0 bits (71), Expect = 0.36 Identities = 22/67 (32%), Positives = 32/67 (47%) Frame = +3 Query: 207 DRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIPSA 386 D A+L +K++L NP + WS D C W H+ C RV + I G + G + Sbjct: 28 DLSAMLSLKKSL-NPPSSFGWS--DPDPCKWTHIVCTGTKRVTRIQI-GHSGLQGTLSPD 83 Query: 387 LAGLTAL 407 L L+ L Sbjct: 84 LRNLSEL 90
>PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)| Length = 2341 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%) Frame = -3 Query: 379 GIWPCTSSAPSMKTLFTRPASSHRRWSHVQQSADAGDHVFSVA--GLPSACFTRSSACRS 206 G PC S+ S +L P+S R S V Q +G + GLPS+ + SS Sbjct: 2144 GFVPCRRSSTSQISLRNLPSSIQSRLSMVNQMEPSGQSGLACVQHGLPSS--SSSSQSIP 2201 Query: 205 ACGH 194 AC H Sbjct: 2202 ACKH 2205
>GP46_LEIAM (P21978) Surface membrane glycoprotein GP46/M-2 precursor| Length = 476 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 204 ADRQALLRVKQALGN--PATLKTWSPASADCCTWDHLRCDEAG 326 A ++ L V QA PA TW+ +D C+W+H+ C +G Sbjct: 41 AQQKNTLTVLQAFARAIPALGDTWT--GSDFCSWEHIICYSSG 81
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I| Length = 536 Score = 27.3 bits (59), Expect = 8.8 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = -3 Query: 406 SAVSPAKADGIWPCTSSAPSMKTLFTRPASSHRRWSHVQQSA-DAGDHVFSVAGLPSACF 230 S +S + A I +SS+P + FT PASS S V S+ + S+ SA Sbjct: 47 SMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSSATL 106 Query: 229 TRSSA 215 T SS+ Sbjct: 107 TSSSS 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,341,494 Number of Sequences: 219361 Number of extensions: 344440 Number of successful extensions: 1336 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1308 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1333 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)