ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast18g03 |
|---|---|
| Clone Library Name | barley_pub |
>PURB_MOUSE (O35295) Transcriptional activator protein Pur-beta (Purine-rich| element-binding protein B) (Vascular actin single-stranded DNA-binding factor 2 p44 component) Length = 323 Score = 42.7 bits (99), Expect = 2e-04 Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = +3 Query: 192 ELVSKTLQFEHKLFYFDLKENPRGRYLKISE-KTSTTRSTIIVPIAGVAWFLDLFDYYI 365 EL SK L ++K FY D+K+N +GR+LKI+E ++S + + +A A F D +I Sbjct: 44 ELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSLGDFI 102 Score = 33.5 bits (75), Expect = 0.12 Identities = 15/30 (50%), Positives = 22/30 (73%) Frame = +3 Query: 195 LVSKTLQFEHKLFYFDLKENPRGRYLKISE 284 L S+ L E++ +Y DLKEN RGR+L+I + Sbjct: 130 LKSEFLVRENRKYYLDLKENQRGRFLRIRQ 159 Score = 29.3 bits (64), Expect = 2.3 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +3 Query: 207 TLQFEHKLFYFDLKENPRGRYLKISEKTSTTRSTIIVPIAGVAW 338 ++ + K F+FD+ N G +L++SE + R+ I VP AW Sbjct: 235 SITVDSKRFFFDVGCNKYGVFLRVSEVKPSYRNAITVPFK--AW 276
>PURB_RAT (Q68A21) Transcriptional activator protein Pur-beta (Purine-rich| element-binding protein B) Length = 314 Score = 42.7 bits (99), Expect = 2e-04 Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = +3 Query: 192 ELVSKTLQFEHKLFYFDLKENPRGRYLKISE-KTSTTRSTIIVPIAGVAWFLDLFDYYI 365 EL SK L ++K FY D+K+N +GR+LKI+E ++S + + +A A F D +I Sbjct: 35 ELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSLGDFI 93 Score = 33.5 bits (75), Expect = 0.12 Identities = 15/30 (50%), Positives = 22/30 (73%) Frame = +3 Query: 195 LVSKTLQFEHKLFYFDLKENPRGRYLKISE 284 L S+ L E++ +Y DLKEN RGR+L+I + Sbjct: 121 LKSEFLVRENRKYYLDLKENQRGRFLRIRQ 150 Score = 29.3 bits (64), Expect = 2.3 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +3 Query: 207 TLQFEHKLFYFDLKENPRGRYLKISEKTSTTRSTIIVPIAGVAW 338 ++ + K F+FD+ N G +L++SE + R+ I VP AW Sbjct: 226 SITVDSKRFFFDVGCNKYGVFLRVSEVKPSYRNAITVPFK--AW 267
>PURB_HUMAN (Q96QR8) Transcriptional activator protein Pur-beta (Purine-rich| element-binding protein B) Length = 311 Score = 42.7 bits (99), Expect = 2e-04 Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = +3 Query: 192 ELVSKTLQFEHKLFYFDLKENPRGRYLKISE-KTSTTRSTIIVPIAGVAWFLDLFDYYI 365 EL SK L ++K FY D+K+N +GR+LKI+E ++S + + +A A F D +I Sbjct: 32 ELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGSKSRLTLSMAVAAEFRDSLGDFI 90 Score = 33.5 bits (75), Expect = 0.12 Identities = 15/30 (50%), Positives = 22/30 (73%) Frame = +3 Query: 195 LVSKTLQFEHKLFYFDLKENPRGRYLKISE 284 L S+ L E++ +Y DLKEN RGR+L+I + Sbjct: 118 LKSEFLVRENRKYYLDLKENQRGRFLRIRQ 147 Score = 29.3 bits (64), Expect = 2.3 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = +3 Query: 207 TLQFEHKLFYFDLKENPRGRYLKISEKTSTTRSTIIVPIAGVAW 338 ++ + K F+FD+ N G +L++SE + R+ I VP AW Sbjct: 223 SITVDSKRFFFDVGCNKYGVFLRVSEVKPSYRNAITVPFK--AW 264
>PURBB_XENLA (Q8AVS4) Transcriptional activator protein Pur-beta-B (Purine-rich| element binding protein B-B) Length = 327 Score = 42.4 bits (98), Expect = 3e-04 Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = +3 Query: 192 ELVSKTLQFEHKLFYFDLKENPRGRYLKISE-KTSTTRSTIIVPIAGVAWFLDLFDYYI 365 EL SK L ++K FY D+K+N +GR++KI+E ++S + + +A A F D +I Sbjct: 31 ELASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMAVAAEFRDYLGDFI 89 Score = 33.5 bits (75), Expect = 0.12 Identities = 15/30 (50%), Positives = 22/30 (73%) Frame = +3 Query: 195 LVSKTLQFEHKLFYFDLKENPRGRYLKISE 284 L S+ L E++ +Y DLKEN RGR+L+I + Sbjct: 122 LKSEFLVRENRKYYLDLKENQRGRFLRIRQ 151 Score = 32.0 bits (71), Expect = 0.36 Identities = 15/44 (34%), Positives = 27/44 (61%) Frame = +3 Query: 207 TLQFEHKLFYFDLKENPRGRYLKISEKTSTTRSTIIVPIAGVAW 338 ++ + K F+FD+ N G +L++SE + R++I VP+ AW Sbjct: 229 SITVDSKRFFFDVGSNKYGVFLRVSEVKPSYRNSITVPLK--AW 270
>PURB_BRARE (Q6PHK6) Transcriptional activator protein Pur-beta (Purine-rich| element-binding protein B) Length = 296 Score = 41.2 bits (95), Expect = 6e-04 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = +3 Query: 192 ELVSKTLQFEHKLFYFDLKENPRGRYLKISE-KTSTTRSTIIVPIAGVAWFLDLFDYYI 365 EL SK L ++K FY D+K+N +GR++KI+E ++S + + ++ A F D +I Sbjct: 27 ELASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMSVAAEFRDYLGDFI 85 Score = 33.5 bits (75), Expect = 0.12 Identities = 15/30 (50%), Positives = 22/30 (73%) Frame = +3 Query: 195 LVSKTLQFEHKLFYFDLKENPRGRYLKISE 284 L S+ L E++ +Y DLKEN RGR+L+I + Sbjct: 114 LKSEFLVRENRKYYLDLKENQRGRFLRIRQ 143 Score = 32.3 bits (72), Expect = 0.28 Identities = 15/52 (28%), Positives = 27/52 (51%) Frame = +3 Query: 207 TLQFEHKLFYFDLKENPRGRYLKISEKTSTTRSTIIVPIAGVAWFLDLFDYY 362 ++ + K F+FD+ N G +L++SE + R++I +P F F Y Sbjct: 215 SIMVDSKRFFFDVGSNKYGVFLRVSEVKPSYRNSITIPFKAWGKFGGAFSRY 266
>PURBA_XENLA (Q6PAC9) Transcriptional activator protein Pur-beta-A (Purine-rich| element-binding protein B-A) Length = 322 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Frame = +3 Query: 192 ELVSKTLQFEHKLFYFDLKENPRGRYLKISE-KTSTTRSTIIVPIAGVAWFLDLFDYYI 365 EL +K L ++K FY D+K+N +GR++KI+E ++S + + + A F D +I Sbjct: 31 ELATKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMGVAAEFRDYLGDFI 89 Score = 33.9 bits (76), Expect = 0.095 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 19/83 (22%) Frame = +3 Query: 195 LVSKTLQFEHKLFYFDLKENPRGRYLKISEKTS---------------TTRSTIIVPIAG 329 L S+ L E++ +Y DLKEN RGR+L+I + + + TI +P G Sbjct: 122 LKSEFLVRENRKYYLDLKENQRGRFLRIRQTINRGPGFSGGAGGGAGLQSGQTIALPAQG 181 Query: 330 VAWFLD----LFDYYIRTDERDV 386 + F D L D Y D+ V Sbjct: 182 LIEFRDALAKLIDDYGGEDDEGV 204 Score = 32.0 bits (71), Expect = 0.36 Identities = 15/44 (34%), Positives = 27/44 (61%) Frame = +3 Query: 207 TLQFEHKLFYFDLKENPRGRYLKISEKTSTTRSTIIVPIAGVAW 338 ++ + K F+FD+ N G +L++SE + R++I VP+ AW Sbjct: 226 SITVDSKRFFFDVGSNKYGVFLRVSEVKPSYRNSITVPLK--AW 267
>PURA_HUMAN (Q00577) Transcriptional activator protein Pur-alpha (Purine-rich| single-stranded DNA-binding protein alpha) Length = 322 Score = 39.7 bits (91), Expect = 0.002 Identities = 16/31 (51%), Positives = 24/31 (77%) Frame = +3 Query: 192 ELVSKTLQFEHKLFYFDLKENPRGRYLKISE 284 EL SK + ++K FY D+K+N +GR+LKI+E Sbjct: 60 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAE 90 Score = 38.9 bits (89), Expect = 0.003 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Frame = +3 Query: 195 LVSKTLQFEHKLFYFDLKENPRGRYLKISEKT-------STTRSTIIVPIAGVAWFLD 347 L S+ L E++ +Y DLKEN RGR+L+I + ST TI +P G+ F D Sbjct: 143 LKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRD 200 Score = 33.5 bits (75), Expect = 0.12 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = +3 Query: 207 TLQFEHKLFYFDLKENPRGRYLKISEKTSTTRSTIIVPIAGVAWFLDLFDYY 362 +L ++K F+FD+ N G ++++SE T R++I VP A F F Y Sbjct: 223 SLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKVWAKFGHTFCKY 274
>PURA_MOUSE (P42669) Transcriptional activator protein Pur-alpha (Purine-rich| single-stranded DNA-binding protein alpha) Length = 321 Score = 39.7 bits (91), Expect = 0.002 Identities = 16/31 (51%), Positives = 24/31 (77%) Frame = +3 Query: 192 ELVSKTLQFEHKLFYFDLKENPRGRYLKISE 284 EL SK + ++K FY D+K+N +GR+LKI+E Sbjct: 59 ELASKRVDIQNKRFYLDVKQNAKGRFLKIAE 89 Score = 38.9 bits (89), Expect = 0.003 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Frame = +3 Query: 195 LVSKTLQFEHKLFYFDLKENPRGRYLKISEKT-------STTRSTIIVPIAGVAWFLD 347 L S+ L E++ +Y DLKEN RGR+L+I + ST TI +P G+ F D Sbjct: 142 LKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRD 199 Score = 33.5 bits (75), Expect = 0.12 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = +3 Query: 207 TLQFEHKLFYFDLKENPRGRYLKISEKTSTTRSTIIVPIAGVAWFLDLFDYY 362 +L ++K F+FD+ N G ++++SE T R++I VP A F F Y Sbjct: 222 SLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKVWAKFGHTFCKY 273
>ARGE_DICDI (P54638) Acetylornithine deacetylase (EC 3.5.1.16)| (Acetylornithinase) (AO) (N-acetylornithinase) (NAO) Length = 448 Score = 29.3 bits (64), Expect = 2.3 Identities = 17/49 (34%), Positives = 28/49 (57%) Frame = +3 Query: 183 SDVELVSKTLQFEHKLFYFDLKENPRGRYLKISEKTSTTRSTIIVPIAG 329 + VELV++ L + FY + K +P+ K + +ST + T+ PIAG Sbjct: 236 NSVELVNEALAEIQRRFYINFKPHPKEAEYKF-DCSSTMKPTLWKPIAG 283
>YHG4_YEAST (P38757) Hypothetical 50.6 kDa protein in RPL14B-GPA1 intergenic| region Length = 446 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +3 Query: 213 QFEHKLFYFDLKENPRGRYLKISEKTSTTRSTIIVPIAGVAWFLDLF-DYYI 365 Q++H + + + R + +K RS +I IA + W L LF YY+ Sbjct: 56 QYDHSSSHLKESDQNQERKNSVPKKPKALRSILIEKIASILWALLLFLPYYL 107
>MATK_PINVI (Q8WKA5) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINTA (Q8HQT5) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINRI (Q8HQT4) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINRA (Q8HQT0) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINPT (Q8HQS3) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINPO (Q8HQT9) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINPA (Q8HQS7) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINLE (Q8HQR1) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINEL (Q8HW57) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINEG (Q8HQT6) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINEC (Q8HQS8) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINCU (Q7YMF8) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINCO (P24685) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINCL (Q6BDI8) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINBN (Q9MV60) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINAT (Q8HQT1) Maturase K (Intron maturase)| Length = 515 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L++YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVCECESILFSR 224
>MATK_PINRE (Q8HQS2) Maturase K (Intron maturase)| Length = 513 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L +YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLLNYYVCECESILFSR 224
>MATK_PINPR (Q8HQR0) Maturase K (Intron maturase)| Length = 513 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFS 392 RS I+VP +FL L++YY+ E +FS Sbjct: 191 RSIIVVPRVNTRFFLFLWNYYVYECESILFS 221
>MINC_HELPJ (Q9ZM51) Probable septum site-determining protein minC| Length = 194 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +3 Query: 186 DVELVSKTLQFEHKLFYFDLKENPRGRYLKISEK 287 D+E K + +H+L + + GRY+K +EK Sbjct: 43 DIESEVKAVLHKHQLLFLETNRALNGRYIKTTEK 76
>MATK_PINYU (Q6BDG8) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L +YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLLNYYVWECESILFSR 224
>MATK_PINUN (Q7YMG2) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L +YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLLNYYVCECESILFSR 224
>MATK_PINTH (Q00866) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L +YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLLNYYVCECESILFSR 224
>MATK_PINTB (Q6BDH0) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L +YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLLNYYVWECESILFSR 224
>MATK_PINSY (Q76IH4) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L +YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLLNYYVCECESILFSR 224
>MATK_PINSI (Q6BDH1) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFS 392 RS I+VP +FL L++YY+ E +FS Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVYECESILFS 223
>MATK_PINRO (Q8HQQ4) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L +YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLLNYYVCECESILFSR 224
>MATK_PINPU (Q6BDH3) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFS 392 RS I+VP +FL L++YY+ E +FS Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVYECESILFS 223
>MATK_PINPS (Q8HQQ6) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L +YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLLNYYVCECESILFSR 224
>MATK_PINPI (Q8HQQ3) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L +YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLLNYYVCECESILFSR 224
>MATK_PINMU (Q76LC1) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L +YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLLNYYVCECESILFSR 224
>MATK_PINLU (Q76IH5) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L +YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLLNYYVCECESILFSR 224
>MATK_PINKO (Q85X50) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFS 392 RS I+VP +FL L++YY+ E +FS Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVYECESILFS 223
>MATK_PINHA (Q8HQQ8) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L +YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLLNYYVCECESILFSR 224
>MATK_PINDE (Q8HQQ2) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFSK 395 RS I+VP +FL L +YY+ E +FS+ Sbjct: 193 RSIIVVPRVNTRFFLFLLNYYVCECESILFSR 224
>MATK_PINCE (Q6BDJ4) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFS 392 RS I+VP +FL L++YY+ E +FS Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVYECESILFS 223
>MATK_PINAR (Q9MV59) Maturase K (Intron maturase)| Length = 515 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 300 RSTIIVPIAGVAWFLDLFDYYIRTDERDVFS 392 RS I+VP +FL L++YY+ E +FS Sbjct: 193 RSIIVVPRVNTRFFLFLWNYYVYECESILFS 223 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,605,664 Number of Sequences: 219361 Number of extensions: 305182 Number of successful extensions: 1189 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 1170 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1189 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
