ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast18f05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009014.1| Triticum aestivum clone wdk3c.pk006.d6:fis, full insert mRNA sequence Length = 1785 Score = 535 bits (270), Expect = e-149 Identities = 321/338 (94%) Strand = Plus / Plus Query: 54 ggcgaaacacacgccagttgccatcgttttcccgatggagaagaagcaggcgagctacgg 113 ||||| |||| ||||||||| |||||||| || ||||||||||| |||||||| |||||| Sbjct: 45 ggcgagacacccgccagttgtcatcgtttccctgatggagaagaggcaggcgacctacgg 104 Query: 114 gaagggcgcggccaggatggcgcccatggaggtgtccgtggaggccgggaacggccggga 173 ||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||| Sbjct: 105 gaagggcgcggccaggatggcgcccatggaggtatcggtggaggccgggaacggcaggga 164 Query: 174 gtccgactggcttgacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgag 233 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 165 gtccgactggcttgacgacgacggccgcccgcgtcggtcgggcacggtgtggacggcgag 224 Query: 234 cgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcctgggccatcgc 293 |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 225 cgcccacatcatcaccgccgtcatcggctcgggcgtcctctcgctggcgtgggccatcgc 284 Query: 294 gcagctcggctgggcggcgggccccgccatcatgctcctgttcgcgctcgtcatctacta 353 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 ccagctcggctgggtggcgggccccgccatcatgctcctgttcgcgctcgtcatctacta 344 Query: 354 cacctccacgctcctcgccgagtgctaccgctccggcg 391 |||||||||||||||||||||||||||||||||||||| Sbjct: 345 cacctccacgctcctcgccgagtgctaccgctccggcg 382
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 272 bits (137), Expect = 8e-70 Identities = 224/253 (88%) Strand = Plus / Minus Query: 139 atggaggtgtccgtggaggccgggaacggccgggagtccgactggcttgacgacgacggg 198 ||||||||||| |||||||||||||||| | ||||| | | ||||| |||||||||||| Sbjct: 4145521 atggaggtgtcggtggaggccgggaacgccggggaggcggcgtggctggacgacgacggg 4145462 Query: 199 cggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatcaccgccgtcatc 258 ||| |||| ||| |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 4145461 cgggcgcggcggacgggcacgttctggacggcgagcgcgcacatcatcaccgccgtcatc 4145402 Query: 259 ggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 |||||||| || || |||||||| ||||| ||||||||||| ||||||| ||| |||||| Sbjct: 4145401 ggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggccggcccc 4145342 Query: 319 gccatcatgctcctgttcgcgctcgtcatctactacacctccacgctcctcgccgagtgc 378 ||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 4145341 gccgtgatgctcctcttcgccttcgtcatctactacacctccaccctcctcgccgagtgc 4145282 Query: 379 taccgctccggcg 391 |||||| |||||| Sbjct: 4145281 taccgcaccggcg 4145269 Score = 264 bits (133), Expect = 2e-67 Identities = 223/253 (88%) Strand = Plus / Plus Query: 139 atggaggtgtccgtggaggccgggaacggccgggagtccgactggcttgacgacgacggg 198 ||||||||||| |||||||||||||||| | ||||| | | ||||| |||||||||||| Sbjct: 4120060 atggaggtgtcggtggaggccgggaacgccggggaggcggcgtggctggacgacgacggg 4120119 Query: 199 cggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatcaccgccgtcatc 258 ||| |||| ||| |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 4120120 cgggcgcggcggacgggcacgttctggacggcgagcgcgcacatcatcaccgccgtcatc 4120179 Query: 259 ggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 |||||||| || || |||||||| ||||| ||||||||||| ||||||| ||| || ||| Sbjct: 4120180 ggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggccggtccc 4120239 Query: 319 gccatcatgctcctgttcgcgctcgtcatctactacacctccacgctcctcgccgagtgc 378 ||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 4120240 gccgtgatgctcctcttcgccttcgtcatctactacacctccaccctcctcgccgagtgc 4120299 Query: 379 taccgctccggcg 391 |||||| |||||| Sbjct: 4120300 taccgcaccggcg 4120312 Score = 123 bits (62), Expect = 5e-25 Identities = 172/206 (83%), Gaps = 2/206 (0%) Strand = Plus / Minus Query: 187 gacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatc 246 |||||||||||||||||||| || | |||||| | |||||||||||||| ||||||||| Sbjct: 4893486 gacgacgacgggcggccgcgccgcaccggcacgttctggacggcgagcgcgcacatcatc 4893427 Query: 247 accgccgtcatcggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgg 306 |||||||| ||||| |||||||| || |||||| | ||||| | ||||||||||| ||| Sbjct: 4893426 accgccgtgatcgggtccggggtgctgtcgctgccgtgggcgacggcgcagctcgggtgg 4893367 Query: 307 g-cggcgggccccgccatcatgctcctgttcgcgctcgtcatctactacacctccacgct 365 | ||||||| |||||| | ||| | |||||| ||||| ||||| |||| ||||||| Sbjct: 4893366 gtcggcggg-cccgccgtgatggtggtgttcggcggcgtcacctacttcaccgccacgct 4893308 Query: 366 cctcgccgagtgctaccgctccggcg 391 || ||||||||||||||| |||||| Sbjct: 4893307 ccaggccgagtgctaccgcaccggcg 4893282 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gctcctcgccgagtgctacc 382 |||||||||||||||||||| Sbjct: 24777060 gctcctcgccgagtgctacc 24777079
>dbj|AK105784.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G09, full insert sequence Length = 1773 Score = 272 bits (137), Expect = 8e-70 Identities = 224/253 (88%) Strand = Plus / Plus Query: 139 atggaggtgtccgtggaggccgggaacggccgggagtccgactggcttgacgacgacggg 198 ||||||||||| |||||||||||||||| | ||||| | | ||||| |||||||||||| Sbjct: 104 atggaggtgtcggtggaggccgggaacgccggggaggcggcgtggctggacgacgacggg 163 Query: 199 cggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatcaccgccgtcatc 258 ||| |||| ||| |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 164 cgggcgcggcggacgggcacgttctggacggcgagcgcgcacatcatcaccgccgtcatc 223 Query: 259 ggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 |||||||| || || |||||||| ||||| ||||||||||| ||||||| ||| |||||| Sbjct: 224 ggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggccggcccc 283 Query: 319 gccatcatgctcctgttcgcgctcgtcatctactacacctccacgctcctcgccgagtgc 378 ||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 284 gccgtgatgctcctcttcgccttcgtcatctactacacctccaccctcctcgccgagtgc 343 Query: 379 taccgctccggcg 391 |||||| |||||| Sbjct: 344 taccgcaccggcg 356
>dbj|AK061470.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D07, full insert sequence Length = 1797 Score = 272 bits (137), Expect = 8e-70 Identities = 224/253 (88%) Strand = Plus / Plus Query: 139 atggaggtgtccgtggaggccgggaacggccgggagtccgactggcttgacgacgacggg 198 ||||||||||| |||||||||||||||| | ||||| | | ||||| |||||||||||| Sbjct: 106 atggaggtgtcggtggaggccgggaacgccggggaggcggcgtggctggacgacgacggg 165 Query: 199 cggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatcaccgccgtcatc 258 ||| |||| ||| |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 166 cgggcgcggcggacgggcacgttctggacggcgagcgcgcacatcatcaccgccgtcatc 225 Query: 259 ggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 |||||||| || || |||||||| ||||| ||||||||||| ||||||| ||| |||||| Sbjct: 226 ggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggccggcccc 285 Query: 319 gccatcatgctcctgttcgcgctcgtcatctactacacctccacgctcctcgccgagtgc 378 ||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 286 gccgtgatgctcctcttcgccttcgtcatctactacacctccaccctcctcgccgagtgc 345 Query: 379 taccgctccggcg 391 |||||| |||||| Sbjct: 346 taccgcaccggcg 358
>dbj|AK061444.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-C11, full insert sequence Length = 1662 Score = 272 bits (137), Expect = 8e-70 Identities = 224/253 (88%) Strand = Plus / Plus Query: 139 atggaggtgtccgtggaggccgggaacggccgggagtccgactggcttgacgacgacggg 198 ||||||||||| |||||||||||||||| | ||||| | | ||||| |||||||||||| Sbjct: 104 atggaggtgtcggtggaggccgggaacgccggggaggcggcgtggctggacgacgacggg 163 Query: 199 cggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatcaccgccgtcatc 258 ||| |||| ||| |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 164 cgggcgcggcggacgggcacgttctggacggcgagcgcgcacatcatcaccgccgtcatc 223 Query: 259 ggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 |||||||| || || |||||||| ||||| ||||||||||| ||||||| ||| |||||| Sbjct: 224 ggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggccggcccc 283 Query: 319 gccatcatgctcctgttcgcgctcgtcatctactacacctccacgctcctcgccgagtgc 378 ||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 284 gccgtgatgctcctcttcgccttcgtcatctactacacctccaccctcctcgccgagtgc 343 Query: 379 taccgctccggcg 391 |||||| |||||| Sbjct: 344 taccgcaccggcg 356
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 272 bits (137), Expect = 8e-70 Identities = 224/253 (88%) Strand = Plus / Minus Query: 139 atggaggtgtccgtggaggccgggaacggccgggagtccgactggcttgacgacgacggg 198 ||||||||||| |||||||||||||||| | ||||| | | ||||| |||||||||||| Sbjct: 4145508 atggaggtgtcggtggaggccgggaacgccggggaggcggcgtggctggacgacgacggg 4145449 Query: 199 cggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatcaccgccgtcatc 258 ||| |||| ||| |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 4145448 cgggcgcggcggacgggcacgttctggacggcgagcgcgcacatcatcaccgccgtcatc 4145389 Query: 259 ggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 |||||||| || || |||||||| ||||| ||||||||||| ||||||| ||| |||||| Sbjct: 4145388 ggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggccggcccc 4145329 Query: 319 gccatcatgctcctgttcgcgctcgtcatctactacacctccacgctcctcgccgagtgc 378 ||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 4145328 gccgtgatgctcctcttcgccttcgtcatctactacacctccaccctcctcgccgagtgc 4145269 Query: 379 taccgctccggcg 391 |||||| |||||| Sbjct: 4145268 taccgcaccggcg 4145256 Score = 264 bits (133), Expect = 2e-67 Identities = 223/253 (88%) Strand = Plus / Plus Query: 139 atggaggtgtccgtggaggccgggaacggccgggagtccgactggcttgacgacgacggg 198 ||||||||||| |||||||||||||||| | ||||| | | ||||| |||||||||||| Sbjct: 4120047 atggaggtgtcggtggaggccgggaacgccggggaggcggcgtggctggacgacgacggg 4120106 Query: 199 cggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatcaccgccgtcatc 258 ||| |||| ||| |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 4120107 cgggcgcggcggacgggcacgttctggacggcgagcgcgcacatcatcaccgccgtcatc 4120166 Query: 259 ggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 |||||||| || || |||||||| ||||| ||||||||||| ||||||| ||| || ||| Sbjct: 4120167 ggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggccggtccc 4120226 Query: 319 gccatcatgctcctgttcgcgctcgtcatctactacacctccacgctcctcgccgagtgc 378 ||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 4120227 gccgtgatgctcctcttcgccttcgtcatctactacacctccaccctcctcgccgagtgc 4120286 Query: 379 taccgctccggcg 391 |||||| |||||| Sbjct: 4120287 taccgcaccggcg 4120299 Score = 123 bits (62), Expect = 5e-25 Identities = 172/206 (83%), Gaps = 2/206 (0%) Strand = Plus / Minus Query: 187 gacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatc 246 |||||||||||||||||||| || | |||||| | |||||||||||||| ||||||||| Sbjct: 4893468 gacgacgacgggcggccgcgccgcaccggcacgttctggacggcgagcgcgcacatcatc 4893409 Query: 247 accgccgtcatcggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgg 306 |||||||| ||||| |||||||| || |||||| | ||||| | ||||||||||| ||| Sbjct: 4893408 accgccgtgatcgggtccggggtgctgtcgctgccgtgggcgacggcgcagctcgggtgg 4893349 Query: 307 g-cggcgggccccgccatcatgctcctgttcgcgctcgtcatctactacacctccacgct 365 | ||||||| |||||| | ||| | |||||| ||||| ||||| |||| ||||||| Sbjct: 4893348 gtcggcggg-cccgccgtgatggtggtgttcggcggcgtcacctacttcaccgccacgct 4893290 Query: 366 cctcgccgagtgctaccgctccggcg 391 || ||||||||||||||| |||||| Sbjct: 4893289 ccaggccgagtgctaccgcaccggcg 4893264 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gctcctcgccgagtgctacc 382 |||||||||||||||||||| Sbjct: 24705266 gctcctcgccgagtgctacc 24705285
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 272 bits (137), Expect = 8e-70 Identities = 224/253 (88%) Strand = Plus / Minus Query: 139 atggaggtgtccgtggaggccgggaacggccgggagtccgactggcttgacgacgacggg 198 ||||||||||| |||||||||||||||| | ||||| | | ||||| |||||||||||| Sbjct: 87917 atggaggtgtcggtggaggccgggaacgccggggaggcggcgtggctggacgacgacggg 87858 Query: 199 cggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatcaccgccgtcatc 258 ||| |||| ||| |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 87857 cgggcgcggcggacgggcacgttctggacggcgagcgcgcacatcatcaccgccgtcatc 87798 Query: 259 ggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 |||||||| || || |||||||| ||||| ||||||||||| ||||||| ||| |||||| Sbjct: 87797 ggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggccggcccc 87738 Query: 319 gccatcatgctcctgttcgcgctcgtcatctactacacctccacgctcctcgccgagtgc 378 ||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 87737 gccgtgatgctcctcttcgccttcgtcatctactacacctccaccctcctcgccgagtgc 87678 Query: 379 taccgctccggcg 391 |||||| |||||| Sbjct: 87677 taccgcaccggcg 87665 Score = 264 bits (133), Expect = 2e-67 Identities = 223/253 (88%) Strand = Plus / Plus Query: 139 atggaggtgtccgtggaggccgggaacggccgggagtccgactggcttgacgacgacggg 198 ||||||||||| |||||||||||||||| | ||||| | | ||||| |||||||||||| Sbjct: 62456 atggaggtgtcggtggaggccgggaacgccggggaggcggcgtggctggacgacgacggg 62515 Query: 199 cggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatcaccgccgtcatc 258 ||| |||| ||| |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 62516 cgggcgcggcggacgggcacgttctggacggcgagcgcgcacatcatcaccgccgtcatc 62575 Query: 259 ggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 |||||||| || || |||||||| ||||| ||||||||||| ||||||| ||| || ||| Sbjct: 62576 ggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggccggtccc 62635 Query: 319 gccatcatgctcctgttcgcgctcgtcatctactacacctccacgctcctcgccgagtgc 378 ||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 62636 gccgtgatgctcctcttcgccttcgtcatctactacacctccaccctcctcgccgagtgc 62695 Query: 379 taccgctccggcg 391 |||||| |||||| Sbjct: 62696 taccgcaccggcg 62708
>dbj|AK106090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B07, full insert sequence Length = 1715 Score = 264 bits (133), Expect = 2e-67 Identities = 223/253 (88%) Strand = Plus / Plus Query: 139 atggaggtgtccgtggaggccgggaacggccgggagtccgactggcttgacgacgacggg 198 ||||||||||| |||||||||||||||| | ||||| | | ||||| |||||||||||| Sbjct: 126 atggaggtgtcggtggaggccgggaacgccggggaggcggcgtggctggacgacgacggg 185 Query: 199 cggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatcaccgccgtcatc 258 ||| |||| ||| |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 186 cgggcgcggcggacgggcacgttctggacggcgagcgcgcacatcatcaccgccgtcatc 245 Query: 259 ggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 |||||||| || || |||||||| ||||| ||||||||||| ||||||| ||| || ||| Sbjct: 246 ggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggccggtccc 305 Query: 319 gccatcatgctcctgttcgcgctcgtcatctactacacctccacgctcctcgccgagtgc 378 ||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 306 gccgtgatgctcctcttcgccttcgtcatctactacacctccaccctcctcgccgagtgc 365 Query: 379 taccgctccggcg 391 |||||| |||||| Sbjct: 366 taccgcaccggcg 378
>dbj|AK099164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O03, full insert sequence Length = 1709 Score = 264 bits (133), Expect = 2e-67 Identities = 223/253 (88%) Strand = Plus / Plus Query: 139 atggaggtgtccgtggaggccgggaacggccgggagtccgactggcttgacgacgacggg 198 ||||||||||| |||||||||||||||| | ||||| | | ||||| |||||||||||| Sbjct: 129 atggaggtgtcggtggaggccgggaacgccggggaggcggcgtggctggacgacgacggg 188 Query: 199 cggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatcaccgccgtcatc 258 ||| |||| ||| |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 189 cgggcgcggcggacgggcacgttctggacggcgagcgcgcacatcatcaccgccgtcatc 248 Query: 259 ggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 |||||||| || || |||||||| ||||| ||||||||||| ||||||| ||| || ||| Sbjct: 249 ggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggccggtccc 308 Query: 319 gccatcatgctcctgttcgcgctcgtcatctactacacctccacgctcctcgccgagtgc 378 ||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 309 gccgtgatgctcctcttcgccttcgtcatctactacacctccaccctcctcgccgagtgc 368 Query: 379 taccgctccggcg 391 |||||| |||||| Sbjct: 369 taccgcaccggcg 381
>dbj|AK061448.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-E03, full insert sequence Length = 1725 Score = 264 bits (133), Expect = 2e-67 Identities = 223/253 (88%) Strand = Plus / Plus Query: 139 atggaggtgtccgtggaggccgggaacggccgggagtccgactggcttgacgacgacggg 198 ||||||||||| |||||||||||||||| | ||||| | | ||||| |||||||||||| Sbjct: 127 atggaggtgtcggtggaggccgggaacgccggggaggcggcgtggctggacgacgacggg 186 Query: 199 cggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatcaccgccgtcatc 258 ||| |||| ||| |||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 187 cgggcgcggcggacgggcacgttctggacggcgagcgcgcacatcatcaccgccgtcatc 246 Query: 259 ggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 |||||||| || || |||||||| ||||| ||||||||||| ||||||| ||| || ||| Sbjct: 247 ggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggccggtccc 306 Query: 319 gccatcatgctcctgttcgcgctcgtcatctactacacctccacgctcctcgccgagtgc 378 ||| | |||||||| ||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 307 gccgtgatgctcctcttcgccttcgtcatctactacacctccaccctcctcgccgagtgc 366 Query: 379 taccgctccggcg 391 |||||| |||||| Sbjct: 367 taccgcaccggcg 379
>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0096N19, complete sequence Length = 178671 Score = 232 bits (117), Expect = 7e-58 Identities = 183/205 (89%) Strand = Plus / Minus Query: 187 gacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatc 246 ||||||||||||||| |||| ||| ||| |||||||||||||||||||| ||||||||| Sbjct: 61863 gacgacgacgggcgggcgcggcggatggggacggtgtggacggcgagcgcgcacatcatc 61804 Query: 247 accgccgtcatcggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgg 306 || || || ||||||||||| || || |||||||| ||||| |||||||||||||||||| Sbjct: 61803 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctcggctgg 61744 Query: 307 gcggcgggccccgccatcatgctcctgttcgcgctcgtcatctactacacctccacgctc 366 | ||| ||||||||| ||||||| || ||||| ||||||||||||||||||||||||| Sbjct: 61743 gtggccggccccgccgtcatgctgctcttcgccttcgtcatctactacacctccacgctg 61684 Query: 367 ctcgccgagtgctaccgctccggcg 391 ||||||||||||||||||||||||| Sbjct: 61683 ctcgccgagtgctaccgctccggcg 61659
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 232 bits (117), Expect = 7e-58 Identities = 183/205 (89%) Strand = Plus / Plus Query: 187 gacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatc 246 ||||||||||||||| |||| ||| ||| |||||||||||||||||||| ||||||||| Sbjct: 4769811 gacgacgacgggcgggcgcggcggatggggacggtgtggacggcgagcgcgcacatcatc 4769870 Query: 247 accgccgtcatcggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgg 306 || || || ||||||||||| || || |||||||| ||||| |||||||||||||||||| Sbjct: 4769871 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctcggctgg 4769930 Query: 307 gcggcgggccccgccatcatgctcctgttcgcgctcgtcatctactacacctccacgctc 366 | ||| ||||||||| ||||||| || ||||| ||||||||||||||||||||||||| Sbjct: 4769931 gtggccggccccgccgtcatgctgctcttcgccttcgtcatctactacacctccacgctg 4769990 Query: 367 ctcgccgagtgctaccgctccggcg 391 ||||||||||||||||||||||||| Sbjct: 4769991 ctcgccgagtgctaccgctccggcg 4770015
>dbj|AK104370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E06, full insert sequence Length = 1707 Score = 232 bits (117), Expect = 7e-58 Identities = 183/205 (89%) Strand = Plus / Plus Query: 187 gacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatc 246 ||||||||||||||| |||| ||| ||| |||||||||||||||||||| ||||||||| Sbjct: 197 gacgacgacgggcgggcgcggcggatggggacggtgtggacggcgagcgcgcacatcatc 256 Query: 247 accgccgtcatcggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgg 306 || || || ||||||||||| || || |||||||| ||||| |||||||||||||||||| Sbjct: 257 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctcggctgg 316 Query: 307 gcggcgggccccgccatcatgctcctgttcgcgctcgtcatctactacacctccacgctc 366 | ||| ||||||||| ||||||| || ||||| ||||||||||||||||||||||||| Sbjct: 317 gtggccggccccgccgtcatgctgctcttcgccttcgtcatctactacacctccacgctg 376 Query: 367 ctcgccgagtgctaccgctccggcg 391 ||||||||||||||||||||||||| Sbjct: 377 ctcgccgagtgctaccgctccggcg 401
>dbj|AK068003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129H02, full insert sequence Length = 1781 Score = 232 bits (117), Expect = 7e-58 Identities = 183/205 (89%) Strand = Plus / Plus Query: 187 gacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatc 246 ||||||||||||||| |||| ||| ||| |||||||||||||||||||| ||||||||| Sbjct: 184 gacgacgacgggcgggcgcggcggatggggacggtgtggacggcgagcgcgcacatcatc 243 Query: 247 accgccgtcatcggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgg 306 || || || ||||||||||| || || |||||||| ||||| |||||||||||||||||| Sbjct: 244 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctcggctgg 303 Query: 307 gcggcgggccccgccatcatgctcctgttcgcgctcgtcatctactacacctccacgctc 366 | ||| ||||||||| ||||||| || ||||| ||||||||||||||||||||||||| Sbjct: 304 gtggccggccccgccgtcatgctgctcttcgccttcgtcatctactacacctccacgctg 363 Query: 367 ctcgccgagtgctaccgctccggcg 391 ||||||||||||||||||||||||| Sbjct: 364 ctcgccgagtgctaccgctccggcg 388
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 232 bits (117), Expect = 7e-58 Identities = 183/205 (89%) Strand = Plus / Plus Query: 187 gacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatc 246 ||||||||||||||| |||| ||| ||| |||||||||||||||||||| ||||||||| Sbjct: 4788595 gacgacgacgggcgggcgcggcggatggggacggtgtggacggcgagcgcgcacatcatc 4788654 Query: 247 accgccgtcatcggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgg 306 || || || ||||||||||| || || |||||||| ||||| |||||||||||||||||| Sbjct: 4788655 acggcggtgatcggctccggcgtgctgtcgctggcgtgggcgatcgcgcagctcggctgg 4788714 Query: 307 gcggcgggccccgccatcatgctcctgttcgcgctcgtcatctactacacctccacgctc 366 | ||| ||||||||| ||||||| || ||||| ||||||||||||||||||||||||| Sbjct: 4788715 gtggccggccccgccgtcatgctgctcttcgccttcgtcatctactacacctccacgctg 4788774 Query: 367 ctcgccgagtgctaccgctccggcg 391 ||||||||||||||||||||||||| Sbjct: 4788775 ctcgccgagtgctaccgctccggcg 4788799
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 157 bits (79), Expect = 3e-35 Identities = 148/171 (86%) Strand = Plus / Plus Query: 221 tgtggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctgg 280 |||||||||||||||| ||||||||||| || || ||||||||||| || || ||||||| Sbjct: 57194 tgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctgg 57253 Query: 281 cctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgttcgcgc 340 ||||| ||||||||||| || |||| ||| ||||||||| ||||||| || ||| || Sbjct: 57254 ggtgggcgatcgcgcagctgggttgggtggccggccccgccgtcatgctgctcttctcgt 57313 Query: 341 tcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 |||||| ||||||||||||| |||| |||||||| |||||||||||||||| Sbjct: 57314 tcgtcacctactacacctccgcgctgctcgccgactgctaccgctccggcg 57364
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 157 bits (79), Expect = 3e-35 Identities = 148/171 (86%) Strand = Plus / Plus Query: 221 tgtggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctgg 280 |||||||||||||||| ||||||||||| || || ||||||||||| || || ||||||| Sbjct: 20635154 tgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctgg 20635213 Query: 281 cctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgttcgcgc 340 ||||| ||||||||||| || |||| ||| ||||||||| ||||||| || ||| || Sbjct: 20635214 ggtgggcgatcgcgcagctgggttgggtggccggccccgccgtcatgctgctcttctcgt 20635273 Query: 341 tcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 |||||| ||||||||||||| |||| |||||||| |||||||||||||||| Sbjct: 20635274 tcgtcacctactacacctccgcgctgctcgccgactgctaccgctccggcg 20635324
>dbj|AK065891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044D15, full insert sequence Length = 1975 Score = 157 bits (79), Expect = 3e-35 Identities = 148/171 (86%) Strand = Plus / Plus Query: 221 tgtggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctgg 280 |||||||||||||||| ||||||||||| || || ||||||||||| || || ||||||| Sbjct: 251 tgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctgg 310 Query: 281 cctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgttcgcgc 340 ||||| ||||||||||| || |||| ||| ||||||||| ||||||| || ||| || Sbjct: 311 ggtgggcgatcgcgcagctgggttgggtggccggccccgccgtcatgctgctcttctcgt 370 Query: 341 tcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 |||||| ||||||||||||| |||| |||||||| |||||||||||||||| Sbjct: 371 tcgtcacctactacacctccgcgctgctcgccgactgctaccgctccggcg 421
>ref|XM_463528.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 133 bits (67), Expect = 5e-28 Identities = 145/171 (84%) Strand = Plus / Plus Query: 221 tgtggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctgg 280 |||||||||||||||| ||||||||||| || || ||||||||||| || || ||||||| Sbjct: 134 tgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctgg 193 Query: 281 cctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgttcgcgc 340 ||||||||||||||||||||||||| ||| || || || ||||| | || ||| | | Sbjct: 194 ggtgggccatcgcgcagctcggctgggtggccgggccggcggtcatggtgctcttctccc 253 Query: 341 tcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 |||||| |||||||||||| | |||||| |||| |||||||||||||||| Sbjct: 254 tcgtcacctactacacctcatccctcctctccgattgctaccgctccggcg 304
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 133 bits (67), Expect = 5e-28 Identities = 145/171 (84%) Strand = Plus / Minus Query: 221 tgtggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctgg 280 |||||||||||||||| ||||||||||| || || ||||||||||| || || ||||||| Sbjct: 38305492 tgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctgg 38305433 Query: 281 cctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgttcgcgc 340 ||||||||||||||||||||||||| ||| || || || ||||| | || ||| | | Sbjct: 38305432 ggtgggccatcgcgcagctcggctgggtggccgggccggcggtcatggtgctcttctccc 38305373 Query: 341 tcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 |||||| |||||||||||| | |||||| |||| |||||||||||||||| Sbjct: 38305372 tcgtcacctactacacctcatccctcctctccgattgctaccgctccggcg 38305322
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 133 bits (67), Expect = 5e-28 Identities = 145/171 (84%) Strand = Plus / Minus Query: 221 tgtggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctgg 280 |||||||||||||||| ||||||||||| || || ||||||||||| || || ||||||| Sbjct: 66317 tgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctgg 66258 Query: 281 cctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgttcgcgc 340 ||||||||||||||||||||||||| ||| || || || ||||| | || ||| | | Sbjct: 66257 ggtgggccatcgcgcagctcggctgggtggccgggccggcggtcatggtgctcttctccc 66198 Query: 341 tcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 |||||| |||||||||||| | |||||| |||| |||||||||||||||| Sbjct: 66197 tcgtcacctactacacctcatccctcctctccgattgctaccgctccggcg 66147
>dbj|AK059325.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-A01, full insert sequence Length = 1858 Score = 133 bits (67), Expect = 5e-28 Identities = 145/171 (84%) Strand = Plus / Plus Query: 221 tgtggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctgg 280 |||||||||||||||| ||||||||||| || || ||||||||||| || || ||||||| Sbjct: 294 tgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctgg 353 Query: 281 cctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgttcgcgc 340 ||||||||||||||||||||||||| ||| || || || ||||| | || ||| | | Sbjct: 354 ggtgggccatcgcgcagctcggctgggtggccgggccggcggtcatggtgctcttctccc 413 Query: 341 tcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 |||||| |||||||||||| | |||||| |||| |||||||||||||||| Sbjct: 414 tcgtcacctactacacctcatccctcctctccgattgctaccgctccggcg 464
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 123 bits (62), Expect = 5e-25 Identities = 172/206 (83%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 187 gacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatc 246 |||||||||||||||||||| || | |||||| | |||||||||||||| ||||||||| Sbjct: 44936 gacgacgacgggcggccgcgccgcaccggcacgttctggacggcgagcgcgcacatcatc 44995 Query: 247 accgccgtcatcggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgg 306 |||||||| ||||| |||||||| || |||||| | ||||| | ||||||||||| ||| Sbjct: 44996 accgccgtgatcgggtccggggtgctgtcgctgccgtgggcgacggcgcagctcgggtgg 45055 Query: 307 g-cggcgggccccgccatcatgctcctgttcgcgctcgtcatctactacacctccacgct 365 | ||||||| |||||| | ||| | |||||| ||||| ||||| |||| ||||||| Sbjct: 45056 gtcggcggg-cccgccgtgatggtggtgttcggcggcgtcacctacttcaccgccacgct 45114 Query: 366 cctcgccgagtgctaccgctccggcg 391 || ||||||||||||||| |||||| Sbjct: 45115 ccaggccgagtgctaccgcaccggcg 45140
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 123 bits (62), Expect = 5e-25 Identities = 172/206 (83%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 187 gacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatc 246 |||||||||||||||||||| || | |||||| | |||||||||||||| ||||||||| Sbjct: 66473 gacgacgacgggcggccgcgccgcaccggcacgttctggacggcgagcgcgcacatcatc 66532 Query: 247 accgccgtcatcggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgg 306 |||||||| ||||| |||||||| || |||||| | ||||| | ||||||||||| ||| Sbjct: 66533 accgccgtgatcgggtccggggtgctgtcgctgccgtgggcgacggcgcagctcgggtgg 66592 Query: 307 g-cggcgggccccgccatcatgctcctgttcgcgctcgtcatctactacacctccacgct 365 | ||||||| |||||| | ||| | |||||| ||||| ||||| |||| ||||||| Sbjct: 66593 gtcggcggg-cccgccgtgatggtggtgttcggcggcgtcacctacttcaccgccacgct 66651 Query: 366 cctcgccgagtgctaccgctccggcg 391 || ||||||||||||||| |||||| Sbjct: 66652 ccaggccgagtgctaccgcaccggcg 66677
>ref|XM_472988.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1467 Score = 115 bits (58), Expect = 1e-22 Identities = 171/206 (83%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 187 gacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatc 246 |||| ||||||| |||||| ||| ||||||| |||||||||||||||| ||||||||| Sbjct: 73 gacggcgacggggagccgcggcggacgggcaccatgtggacggcgagcgcgcacatcatc 132 Query: 247 accgccgtcatcggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgg 306 || || || ||||| ||||| || || |||||||| |||| | |||||||||| || ||| Sbjct: 133 acggcggtgatcgggtccggcgtgctgtcgctggcgtggggcgtcgcgcagctggggtgg 192 Query: 307 gcggcgggccccgccatcatgctcctgttc-gcgctcgtcatctactacacctccacgct 365 | ||| |||||||| | ||||| |||||| |||| ||||||||||| | |||| ||| Sbjct: 193 gtggccggccccgcggtgatgctgctgttcggcgc-cgtcatctactgctgctccgtgct 251 Query: 366 cctcgccgagtgctaccgctccggcg 391 ||||| ||||||||||||| |||||| Sbjct: 252 cctcgtcgagtgctaccgcaccggcg 277
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 115 bits (58), Expect = 1e-22 Identities = 171/206 (83%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 187 gacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatc 246 |||| ||||||| |||||| ||| ||||||| |||||||||||||||| ||||||||| Sbjct: 69401 gacggcgacggggagccgcggcggacgggcaccatgtggacggcgagcgcgcacatcatc 69460 Query: 247 accgccgtcatcggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgg 306 || || || ||||| ||||| || || |||||||| |||| | |||||||||| || ||| Sbjct: 69461 acggcggtgatcgggtccggcgtgctgtcgctggcgtggggcgtcgcgcagctggggtgg 69520 Query: 307 gcggcgggccccgccatcatgctcctgttc-gcgctcgtcatctactacacctccacgct 365 | ||| |||||||| | ||||| |||||| |||| ||||||||||| | |||| ||| Sbjct: 69521 gtggccggccccgcggtgatgctgctgttcggcgc-cgtcatctactgctgctccgtgct 69579 Query: 366 cctcgccgagtgctaccgctccggcg 391 ||||| ||||||||||||| |||||| Sbjct: 69580 cctcgtcgagtgctaccgcaccggcg 69605
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 115 bits (58), Expect = 1e-22 Identities = 171/206 (83%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 187 gacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatc 246 |||| ||||||| |||||| ||| ||||||| |||||||||||||||| ||||||||| Sbjct: 24509770 gacggcgacggggagccgcggcggacgggcaccatgtggacggcgagcgcgcacatcatc 24509829 Query: 247 accgccgtcatcggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgg 306 || || || ||||| ||||| || || |||||||| |||| | |||||||||| || ||| Sbjct: 24509830 acggcggtgatcgggtccggcgtgctgtcgctggcgtggggcgtcgcgcagctggggtgg 24509889 Query: 307 gcggcgggccccgccatcatgctcctgttc-gcgctcgtcatctactacacctccacgct 365 | ||| |||||||| | ||||| |||||| |||| ||||||||||| | |||| ||| Sbjct: 24509890 gtggccggccccgcggtgatgctgctgttcggcgc-cgtcatctactgctgctccgtgct 24509948 Query: 366 cctcgccgagtgctaccgctccggcg 391 ||||| ||||||||||||| |||||| Sbjct: 24509949 cctcgtcgagtgctaccgcaccggcg 24509974 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 tcgcgcagctcggctgggcggcgggcccc 318 |||||||||||||||||| ||| |||||| Sbjct: 33696021 tcgcgcagctcggctgggtggccggcccc 33696049 Score = 40.1 bits (20), Expect = 5.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 238 cacatcatcaccgccgtcatcggctccggggtcctctcgctggc 281 ||||||||||| || || ||||| |||||||| || |||||||| Sbjct: 23490503 cacatcatcacggcggtgatcgggtccggggtgctgtcgctggc 23490460
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 115 bits (58), Expect = 1e-22 Identities = 171/206 (83%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 187 gacgacgacgggcggccgcgtcggtcgggcacggtgtggacggcgagcgcccacatcatc 246 |||| ||||||| |||||| ||| ||||||| |||||||||||||||| ||||||||| Sbjct: 103092 gacggcgacggggagccgcggcggacgggcaccatgtggacggcgagcgcgcacatcatc 103151 Query: 247 accgccgtcatcggctccggggtcctctcgctggcctgggccatcgcgcagctcggctgg 306 || || || ||||| ||||| || || |||||||| |||| | |||||||||| || ||| Sbjct: 103152 acggcggtgatcgggtccggcgtgctgtcgctggcgtggggcgtcgcgcagctggggtgg 103211 Query: 307 gcggcgggccccgccatcatgctcctgttc-gcgctcgtcatctactacacctccacgct 365 | ||| |||||||| | ||||| |||||| |||| ||||||||||| | |||| ||| Sbjct: 103212 gtggccggccccgcggtgatgctgctgttcggcgc-cgtcatctactgctgctccgtgct 103270 Query: 366 cctcgccgagtgctaccgctccggcg 391 ||||| ||||||||||||| |||||| Sbjct: 103271 cctcgtcgagtgctaccgcaccggcg 103296
>ref|XM_463785.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1814 Score = 111 bits (56), Expect = 2e-21 Identities = 148/176 (84%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 217 acggtgtggacggcgagcgcc-cacatcatcaccgccgtcatcggctccggggtcctctc 275 ||||||||||||||| ||| | ||||||||||| || || ||||| || || || || || Sbjct: 322 acggtgtggacggcg-gcgtcgcacatcatcacggcggtgatcgggtcaggtgtgctgtc 380 Query: 276 gctggcctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgtt 335 |||||| ||||| ||||||||||| ||||||| || ||||||| || |||||||||| || Sbjct: 381 gctggcgtgggcgatcgcgcagctgggctgggtggtgggccccaccgtcatgctcctctt 440 Query: 336 cgcgctcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 || ||||||||||| |||||||| ||||||||||| ||||||||| |||||| Sbjct: 441 tgctgccgtcatctacttcacctccaacctcctcgccgactgctaccgcaccggcg 496
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 111 bits (56), Expect = 2e-21 Identities = 148/176 (84%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 217 acggtgtggacggcgagcgcc-cacatcatcaccgccgtcatcggctccggggtcctctc 275 ||||||||||||||| ||| | ||||||||||| || || ||||| || || || || || Sbjct: 120007 acggtgtggacggcg-gcgtcgcacatcatcacggcggtgatcgggtcaggtgtgctgtc 120065 Query: 276 gctggcctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgtt 335 |||||| ||||| ||||||||||| ||||||| || ||||||| || |||||||||| || Sbjct: 120066 gctggcgtgggcgatcgcgcagctgggctgggtggtgggccccaccgtcatgctcctctt 120125 Query: 336 cgcgctcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 || ||||||||||| |||||||| ||||||||||| ||||||||| |||||| Sbjct: 120126 tgctgccgtcatctacttcacctccaacctcctcgccgactgctaccgcaccggcg 120181 Score = 50.1 bits (25), Expect = 0.005 Identities = 70/85 (82%) Strand = Plus / Plus Query: 223 tggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcc 282 |||||||||| || |||||||| || || || ||||||||||| || || |||||||| Sbjct: 30011921 tggacggcgacggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcg 30011980 Query: 283 tgggccatcgcgcagctcggctggg 307 ||| | | |||||||||||||||| Sbjct: 30011981 tggagcgtggcgcagctcggctggg 30012005
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 111 bits (56), Expect = 2e-21 Identities = 148/176 (84%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 217 acggtgtggacggcgagcgcc-cacatcatcaccgccgtcatcggctccggggtcctctc 275 ||||||||||||||| ||| | ||||||||||| || || ||||| || || || || || Sbjct: 114616 acggtgtggacggcg-gcgtcgcacatcatcacggcggtgatcgggtcaggtgtgctgtc 114674 Query: 276 gctggcctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgtt 335 |||||| ||||| ||||||||||| ||||||| || ||||||| || |||||||||| || Sbjct: 114675 gctggcgtgggcgatcgcgcagctgggctgggtggtgggccccaccgtcatgctcctctt 114734 Query: 336 cgcgctcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 || ||||||||||| |||||||| ||||||||||| ||||||||| |||||| Sbjct: 114735 tgctgccgtcatctacttcacctccaacctcctcgccgactgctaccgcaccggcg 114790
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 111 bits (56), Expect = 2e-21 Identities = 148/176 (84%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 217 acggtgtggacggcgagcgcc-cacatcatcaccgccgtcatcggctccggggtcctctc 275 ||||||||||||||| ||| | ||||||||||| || || ||||| || || || || || Sbjct: 69034 acggtgtggacggcg-gcgtcgcacatcatcacggcggtgatcgggtcaggtgtgctgtc 69092 Query: 276 gctggcctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgtt 335 |||||| ||||| ||||||||||| ||||||| || ||||||| || |||||||||| || Sbjct: 69093 gctggcgtgggcgatcgcgcagctgggctgggtggtgggccccaccgtcatgctcctctt 69152 Query: 336 cgcgctcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 || ||||||||||| |||||||| ||||||||||| ||||||||| |||||| Sbjct: 69153 tgctgccgtcatctacttcacctccaacctcctcgccgactgctaccgcaccggcg 69208
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 109 bits (55), Expect = 7e-21 Identities = 145/175 (82%) Strand = Plus / Minus Query: 217 acggtgtggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcg 276 |||| ||||||||||||||| |||||| |||| || || |||||||||| || || ||| Sbjct: 6695481 acggagtggacggcgagcgcgcacatcgtcacggcggtggtcggctccggcgtgctgtcg 6695422 Query: 277 ctggcctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgttc 336 ||||| ||| ||| |||||||||||||||| || ||||| |||| | | || ||||| Sbjct: 6695421 ctggcatggtccacggcgcagctcggctgggtcgccggcccggccaccctcgtcgtgttc 6695362 Query: 337 gcgctcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 ||| || ||| ||||||||||||| |||||||||||| ||||||||| |||||| Sbjct: 6695361 gcggtcatcacctactacacctccgtgctcctcgccgactgctaccgcgccggcg 6695307 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 223 tggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcc 282 |||||||||||||| ||||||||||| || || ||||||||||| || ||||| || || Sbjct: 20841850 tggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgca 20841909 Query: 283 tgggccatcgcgcagctcggctggg 307 ||||| | |||||||||||||||| Sbjct: 20841910 tgggcaacggcgcagctcggctggg 20841934 Score = 60.0 bits (30), Expect = 6e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 217 acggtgtggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcg 276 |||||||||||||||| || ||||| ||||| || || ||||| ||||| || || ||| Sbjct: 20864111 acggtgtggacggcgacggcgcacataatcacggcggtgatcgggtccggcgtgctgtcg 20864170 Query: 277 ctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 ||||| ||||| || |||||||| || |||| ||| |||||| Sbjct: 20864171 ctggcgtgggcgatggcgcagctggggtgggtggctggcccc 20864212 Score = 40.1 bits (20), Expect = 5.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 349 tactacacctccacgctcctcgccgagtgctaccgc 384 ||||||||||| |||||||||||| ||||||||| Sbjct: 20841976 tactacacctctgggctcctcgccgactgctaccgc 20842011 Score = 40.1 bits (20), Expect = 5.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 tcgtcatctactacacctccacgctcctcgccgagtgctaccgc 384 |||||| ||||||| |||| | ||||||||||| ||||||||| Sbjct: 6705571 tcgtcacctactactcctcggccctcctcgccgactgctaccgc 6705528
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 109 bits (55), Expect = 7e-21 Identities = 145/175 (82%) Strand = Plus / Minus Query: 217 acggtgtggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcg 276 |||| ||||||||||||||| |||||| |||| || || |||||||||| || || ||| Sbjct: 129607 acggagtggacggcgagcgcgcacatcgtcacggcggtggtcggctccggcgtgctgtcg 129548 Query: 277 ctggcctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgttc 336 ||||| ||| ||| |||||||||||||||| || ||||| |||| | | || ||||| Sbjct: 129547 ctggcatggtccacggcgcagctcggctgggtcgccggcccggccaccctcgtcgtgttc 129488 Query: 337 gcgctcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 ||| || ||| ||||||||||||| |||||||||||| ||||||||| |||||| Sbjct: 129487 gcggtcatcacctactacacctccgtgctcctcgccgactgctaccgcgccggcg 129433 Score = 40.1 bits (20), Expect = 5.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 tcgtcatctactacacctccacgctcctcgccgagtgctaccgc 384 |||||| ||||||| |||| | ||||||||||| ||||||||| Sbjct: 139697 tcgtcacctactactcctcggccctcctcgccgactgctaccgc 139654
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 109 bits (55), Expect = 7e-21 Identities = 145/175 (82%) Strand = Plus / Minus Query: 217 acggtgtggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcg 276 |||| ||||||||||||||| |||||| |||| || || |||||||||| || || ||| Sbjct: 25160 acggagtggacggcgagcgcgcacatcgtcacggcggtggtcggctccggcgtgctgtcg 25101 Query: 277 ctggcctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgttc 336 ||||| ||| ||| |||||||||||||||| || ||||| |||| | | || ||||| Sbjct: 25100 ctggcatggtccacggcgcagctcggctgggtcgccggcccggccaccctcgtcgtgttc 25041 Query: 337 gcgctcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 ||| || ||| ||||||||||||| |||||||||||| ||||||||| |||||| Sbjct: 25040 gcggtcatcacctactacacctccgtgctcctcgccgactgctaccgcgccggcg 24986 Score = 40.1 bits (20), Expect = 5.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 341 tcgtcatctactacacctccacgctcctcgccgagtgctaccgc 384 |||||| ||||||| |||| | ||||||||||| ||||||||| Sbjct: 35250 tcgtcacctactactcctcggccctcctcgccgactgctaccgc 35207
>dbj|AK106762.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-E07, full insert sequence Length = 1726 Score = 109 bits (55), Expect = 7e-21 Identities = 145/175 (82%) Strand = Plus / Plus Query: 217 acggtgtggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcg 276 |||| ||||||||||||||| |||||| |||| || || |||||||||| || || ||| Sbjct: 255 acggagtggacggcgagcgcgcacatcgtcacggcggtggtcggctccggcgtgctgtcg 314 Query: 277 ctggcctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgttc 336 ||||| ||| ||| |||||||||||||||| || ||||| |||| | | || ||||| Sbjct: 315 ctggcatggtccacggcgcagctcggctgggtcgccggcccggccaccctcgtcgtgttc 374 Query: 337 gcgctcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 ||| || ||| ||||||||||||| |||||||||||| ||||||||| |||||| Sbjct: 375 gcggtcatcacctactacacctccgtgctcctcgccgactgctaccgcgccggcg 429
>dbj|AK060685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-G03, full insert sequence Length = 1835 Score = 103 bits (52), Expect = 4e-19 Identities = 147/176 (83%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 217 acggtgtggacggcgagcgcc-cacatcatcaccgccgtcatcggctccggggtcctctc 275 ||||||||||||||| ||| | ||||||||||| || || ||||| || || || || || Sbjct: 343 acggtgtggacggcg-gcgtcgcacatcatcacggcggtgatcgggtcaggtgtgctgtc 401 Query: 276 gctggcctgggccatcgcgcagctcggctgggcggcgggccccgccatcatgctcctgtt 335 |||||| ||||| ||||||||||| ||||||| || ||||||| || |||||||||| || Sbjct: 402 gctggcgtgggcgatcgcgcagctgggctgggtggtgggccccaccgtcatgctcctctt 461 Query: 336 cgcgctcgtcatctactacacctccacgctcctcgccgagtgctaccgctccggcg 391 || ||||| ||||| |||||||| ||||||||||| ||||||||| |||||| Sbjct: 462 tgctgccgtcacctacttcacctccaacctcctcgccgactgctaccgcaccggcg 517
>dbj|AP003613.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E11 Length = 148798 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 223 tggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcc 282 |||||||||||||| ||||||||||| || || ||||||||||| || ||||| || || Sbjct: 96525 tggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgca 96584 Query: 283 tgggccatcgcgcagctcggctggg 307 ||||| | |||||||||||||||| Sbjct: 96585 tgggcaacggcgcagctcggctggg 96609 Score = 60.0 bits (30), Expect = 6e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 217 acggtgtggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcg 276 |||||||||||||||| || ||||| ||||| || || ||||| ||||| || || ||| Sbjct: 118786 acggtgtggacggcgacggcgcacataatcacggcggtgatcgggtccggcgtgctgtcg 118845 Query: 277 ctggcctgggccatcgcgcagctcggctgggcggcgggcccc 318 ||||| ||||| || |||||||| || |||| ||| |||||| Sbjct: 118846 ctggcgtgggcgatggcgcagctggggtgggtggctggcccc 118887 Score = 40.1 bits (20), Expect = 5.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 349 tactacacctccacgctcctcgccgagtgctaccgc 384 ||||||||||| |||||||||||| ||||||||| Sbjct: 96651 tactacacctctgggctcctcgccgactgctaccgc 96686
>dbj|AK102763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D14, full insert sequence Length = 1890 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 223 tggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcc 282 |||||||||||||| ||||||||||| || || ||||||||||| || ||||| || || Sbjct: 229 tggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgca 288 Query: 283 tgggccatcgcgcagctcggctggg 307 ||||| | |||||||||||||||| Sbjct: 289 tgggcaacggcgcagctcggctggg 313 Score = 40.1 bits (20), Expect = 5.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 349 tactacacctccacgctcctcgccgagtgctaccgc 384 ||||||||||| |||||||||||| ||||||||| Sbjct: 355 tactacacctctgggctcctcgccgactgctaccgc 390
>dbj|AK058304.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H01, full insert sequence Length = 1823 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 223 tggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcc 282 |||||||||||||| ||||||||||| || || ||||||||||| || ||||| || || Sbjct: 226 tggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctctctctcgca 285 Query: 283 tgggccatcgcgcagctcggctggg 307 ||||| | |||||||||||||||| Sbjct: 286 tgggcaacggcgcagctcggctggg 310
>ref|XM_476538.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1708 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 225 gacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcctg 284 |||||||||||| ||||| || || || || ||||||||||| || || |||||||| || Sbjct: 224 gacggcgagcgcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtg 283 Query: 285 ggccatcgcgcagct 299 ||| || |||||||| Sbjct: 284 ggcgatagcgcagct 298
>ref|XM_476539.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1775 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 225 gacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcctg 284 |||||||||||| ||||| || || || || ||||||||||| || || |||||||| || Sbjct: 99 gacggcgagcgcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtg 158 Query: 285 ggccatcgcgcagct 299 ||| || |||||||| Sbjct: 159 ggcgatagcgcagct 173
>gb|AY224447.1| Oryza sativa (japonica cultivar-group) isolate 23048 amino acid permease-like protein mRNA, partial cds Length = 915 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 225 gacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcctg 284 |||||||||||| ||||| || || || || ||||||||||| || || |||||||| || Sbjct: 30 gacggcgagcgcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtg 89 Query: 285 ggccatcgcgcagct 299 ||| || |||||||| Sbjct: 90 ggcgatagcgcagct 104
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 225 gacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcctg 284 |||||||||||| ||||| || || || || ||||||||||| || || |||||||| || Sbjct: 1826375 gacggcgagcgcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtg 1826316 Query: 285 ggccatcgcgcagct 299 ||| || |||||||| Sbjct: 1826315 ggcgatagcgcagct 1826301
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0507H12 Length = 143030 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 225 gacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcctg 284 |||||||||||| ||||| || || || || ||||||||||| || || |||||||| || Sbjct: 30954 gacggcgagcgcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtg 30895 Query: 285 ggccatcgcgcagct 299 ||| || |||||||| Sbjct: 30894 ggcgatagcgcagct 30880
>dbj|AP003742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_D07 Length = 131449 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 225 gacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcctg 284 |||||||||||| ||||| || || || || ||||||||||| || || |||||||| || Sbjct: 78594 gacggcgagcgcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtg 78535 Query: 285 ggccatcgcgcagct 299 ||| || |||||||| Sbjct: 78534 ggcgatagcgcagct 78520
>dbj|AK120257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046A03, full insert sequence Length = 1870 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 225 gacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcctg 284 |||||||||||| ||||| || || || || ||||||||||| || || |||||||| || Sbjct: 226 gacggcgagcgcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtg 285 Query: 285 ggccatcgcgcagct 299 ||| || |||||||| Sbjct: 286 ggcgatagcgcagct 300
>dbj|AK106110.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D09, full insert sequence Length = 1708 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 225 gacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcctg 284 |||||||||||| ||||| || || || || ||||||||||| || || |||||||| || Sbjct: 224 gacggcgagcgcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtg 283 Query: 285 ggccatcgcgcagct 299 ||| || |||||||| Sbjct: 284 ggcgatagcgcagct 298
>dbj|AK103862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149D13, full insert sequence Length = 1774 Score = 54.0 bits (27), Expect = 3e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 225 gacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcctg 284 |||||||||||| ||||| || || || || ||||||||||| || || |||||||| || Sbjct: 98 gacggcgagcgcgcacataataacggcggtgatcggctccggcgtgctgtcgctggcgtg 157 Query: 285 ggccatcgcgcagct 299 ||| || |||||||| Sbjct: 158 ggcgatagcgcagct 172
>ref|XM_467533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 50.1 bits (25), Expect = 0.005 Identities = 70/85 (82%) Strand = Plus / Plus Query: 223 tggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcc 282 |||||||||| || |||||||| || || || ||||||||||| || || |||||||| Sbjct: 51 tggacggcgacggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcg 110 Query: 283 tgggccatcgcgcagctcggctggg 307 ||| | | |||||||||||||||| Sbjct: 111 tggagcgtggcgcagctcggctggg 135
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 50.1 bits (25), Expect = 0.005 Identities = 70/85 (82%) Strand = Plus / Plus Query: 223 tggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcc 282 |||||||||| || |||||||| || || || ||||||||||| || || |||||||| Sbjct: 112197 tggacggcgacggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcg 112256 Query: 283 tgggccatcgcgcagctcggctggg 307 ||| | | |||||||||||||||| Sbjct: 112257 tggagcgtggcgcagctcggctggg 112281
>dbj|AK070030.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N07, full insert sequence Length = 1506 Score = 50.1 bits (25), Expect = 0.005 Identities = 70/85 (82%) Strand = Plus / Plus Query: 223 tggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcc 282 |||||||||| || |||||||| || || || ||||||||||| || || |||||||| Sbjct: 51 tggacggcgacggcgcacatcataacggcggtgatcggctccggcgtgctgtcgctggcg 110 Query: 283 tgggccatcgcgcagctcggctggg 307 ||| | | |||||||||||||||| Sbjct: 111 tggagcgtggcgcagctcggctggg 135
>ref|NM_100875.1| Arabidopsis thaliana AAP8; amino acid permease AT1G10010 (AAP8) mRNA, complete cds Length = 1428 Score = 42.1 bits (21), Expect = 1.3 Identities = 54/65 (83%) Strand = Plus / Plus Query: 223 tggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcc 282 ||||||||||| || ||||| ||||| || ||||| ||||| ||||| || ||| |||| Sbjct: 97 tggacggcgagtgcgcacataatcacggcggtcataggctcaggggtgctgtcgttggct 156 Query: 283 tgggc 287 ||||| Sbjct: 157 tgggc 161
>ref|XM_474206.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1410 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 tcgcgcagctcggctgggcggcgggcccc 318 |||||||||||||||||| ||| |||||| Sbjct: 149 tcgcgcagctcggctgggtggccggcccc 177
>gb|AC004122.1| Arabidopsis thaliana chromosome I BAC T27I1 genomic sequence, complete sequence Length = 67878 Score = 42.1 bits (21), Expect = 1.3 Identities = 54/65 (83%) Strand = Plus / Plus Query: 223 tggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcc 282 ||||||||||| || ||||| ||||| || ||||| ||||| ||||| || ||| |||| Sbjct: 11386 tggacggcgagtgcgcacataatcacggcggtcataggctcaggggtgctgtcgttggct 11445 Query: 283 tgggc 287 ||||| Sbjct: 11446 tgggc 11450
>gb|DQ446241.1| Arabidopsis thaliana clone pENTR221-At1g10010 amino acid permease (At1g10010) mRNA, complete cds Length = 591 Score = 42.1 bits (21), Expect = 1.3 Identities = 54/65 (83%) Strand = Plus / Plus Query: 223 tggacggcgagcgcccacatcatcaccgccgtcatcggctccggggtcctctcgctggcc 282 ||||||||||| || ||||| ||||| || ||||| ||||| ||||| || ||| |||| Sbjct: 97 tggacggcgagtgcgcacataatcacggcggtcataggctcaggggtgctgtcgttggct 156 Query: 283 tgggc 287 ||||| Sbjct: 157 tgggc 161
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 tcgcgcagctcggctgggcggcgggcccc 318 |||||||||||||||||| ||| |||||| Sbjct: 127081 tcgcgcagctcggctgggtggccggcccc 127109
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 tcgcgcagctcggctgggcggcgggcccc 318 |||||||||||||||||| ||| |||||| Sbjct: 46464 tcgcgcagctcggctgggtggccggcccc 46492
>gb|AF293355.2| Streptomyces collinus DSM2012 rubrinomycin gene cluster, complete sequence Length = 32634 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 tcgggcacggtgtggacggcg 231 ||||||||||||||||||||| Sbjct: 4686 tcgggcacggtgtggacggcg 4706
>gb|AY078067.1| Saccharopolyspora erythraea red pigment gene cluster, partial sequence Length = 11124 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 287 ccatcgcgcagctcggctgggcggcgggc 315 ||||||||||||||||||| || |||||| Sbjct: 3505 ccatcgcgcagctcggctgcgccgcgggc 3533
>dbj|AB218878.1| Streptomyces griseus genes for AraC-type transcriptional regulator, ABC-transport system, substrate-binding extracellular domain, ABC-transport system, membrane integral subunit, ABC-transport system, membrane integral subunit, ABC-transport system, ATP-binding protein, Cytochrome P-450, type III polyketide synthase, subtilisine-like serine protease, chitinase, partial and complete cds Length = 12095 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 287 ccatcgcgcagctcggctgggcggcgggc 315 ||||||| ||||||||||| ||||||||| Sbjct: 6274 ccatcgcccagctcggctgtgcggcgggc 6302
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 tcgcgcagctcggctgggcggcgggcccc 318 |||||||||||||||||| ||| |||||| Sbjct: 127199 tcgcgcagctcggctgggtggccggcccc 127227
>dbj|AB018074.1| Streptomyces griseus genes for orf-1 and orf-2, similar to chalcone synthase and cytochrome P-450, complete cds Length = 2795 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 287 ccatcgcgcagctcggctgggcggcgggc 315 ||||||| ||||||||||| ||||||||| Sbjct: 1990 ccatcgcccagctcggctgtgcggcgggc 2018
>ref|XM_516303.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC460198), mRNA Length = 11877 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 cggctccggggtcctctcgc 277 |||||||||||||||||||| Sbjct: 4705 cggctccggggtcctctcgc 4724
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cgctggcctgggccatcgcg 294 |||||||||||||||||||| Sbjct: 3020676 cgctggcctgggccatcgcg 3020657
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tgctcctgttcgcgctcgtc 345 |||||||||||||||||||| Sbjct: 3456992 tgctcctgttcgcgctcgtc 3456973
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tcgcgctcgtcatctactac 354 |||||||||||||||||||| Sbjct: 2299492 tcgcgctcgtcatctactac 2299473
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 tgctcctgttcgcgctcgtc 345 |||||||||||||||||||| Sbjct: 494743 tgctcctgttcgcgctcgtc 494724
>emb|AJ304453.1|PPS304453 Plasmid pSB102 complete genome Length = 55578 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gccgtcatcggctccggggt 269 |||||||||||||||||||| Sbjct: 5488 gccgtcatcggctccggggt 5469
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 atcatcaccgccgtcatcgg 260 |||||||||||||||||||| Sbjct: 4292253 atcatcaccgccgtcatcgg 4292272
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cgctggcctgggccatcgcg 294 |||||||||||||||||||| Sbjct: 24229 cgctggcctgggccatcgcg 24210
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 cgctggcctgggccatcgcg 294 |||||||||||||||||||| Sbjct: 319151 cgctggcctgggccatcgcg 319132
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cgctggcctgggccatcgcg 294 |||||||||||||||||||| Sbjct: 258681 cgctggcctgggccatcgcg 258700
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 40.1 bits (20), Expect = 5.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 310 gcgggccccgccatcatgctcctgttcg 337 ||||||| |||||||||||| ||||||| Sbjct: 198077 gcgggcctcgccatcatgctgctgttcg 198104
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tcgcgctcgtcatctactac 354 |||||||||||||||||||| Sbjct: 460970 tcgcgctcgtcatctactac 460951
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 cgcccacatcatcaccgccg 253 |||||||||||||||||||| Sbjct: 1342042 cgcccacatcatcaccgccg 1342023
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tcgcgctcgtcatctactac 354 |||||||||||||||||||| Sbjct: 1527574 tcgcgctcgtcatctactac 1527593
>gb|AF548450.1| Uncultured bacterium plasmid pAK211 putative dehydrogenase and lipoprotein VacJ (vacJ) genes, complete cds; and putative resistance protein YegO (yegO) gene, partial cds Length = 2596 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 gcgcggccaggatggcgcccatgg 142 ||||| |||||||||||||||||| Sbjct: 1906 gcgcgcccaggatggcgcccatgg 1929
>gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164595 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 gggcggccgcgtcggtcggg 215 |||||||||||||||||||| Sbjct: 116544 gggcggccgcgtcggtcggg 116525
>gb|AC024937.21| Homo sapiens 3 BAC RP11-480A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157198 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gggcggccgcgtcggtcggg 215 |||||||||||||||||||| Sbjct: 8796 gggcggccgcgtcggtcggg 8815
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cgactggcttgacgacgacg 196 |||||||||||||||||||| Sbjct: 1205931 cgactggcttgacgacgacg 1205912
>gb|AC087591.2| Homo sapiens chromosome 3 clone RP11-95M5 map 3p, complete sequence Length = 161014 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 cggctccggggtcctctcgc 277 |||||||||||||||||||| Sbjct: 92130 cggctccggggtcctctcgc 92149
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 ggtcctctcgctggcctggg 286 |||||||||||||||||||| Sbjct: 3629858 ggtcctctcgctggcctggg 3629877
>dbj|AK106814.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D01, full insert sequence Length = 1749 Score = 40.1 bits (20), Expect = 5.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 341 tcgtcatctactacacctccacgctcctcgccgagtgctaccgc 384 |||||| ||||||| |||| | ||||||||||| ||||||||| Sbjct: 310 tcgtcacctactactcctcggccctcctcgccgactgctaccgc 353
>emb|AJ325600.1|HSA325600 Homo sapiens genomic sequence surrounding NotI site, clone NB6-422C Length = 953 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 cggctccggggtcctctcgc 277 |||||||||||||||||||| Sbjct: 253 cggctccggggtcctctcgc 272
>emb|CT573045.6| Pig DNA sequence from clone CH242-519K3 on chromosome 17, complete sequence Length = 105913 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 cacatcatcaccgccgtcat 257 |||||||||||||||||||| Sbjct: 73940 cacatcatcaccgccgtcat 73921
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 tcatcaccgccgtcatcggc 261 |||||||||||||||||||| Sbjct: 2417846 tcatcaccgccgtcatcggc 2417865
>emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140383 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 gctcctcgccgagtgctacc 382 |||||||||||||||||||| Sbjct: 84217 gctcctcgccgagtgctacc 84236
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 40.1 bits (20), Expect = 5.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 238 cacatcatcaccgccgtcatcggctccggggtcctctcgctggc 281 ||||||||||| || || ||||| |||||||| || |||||||| Sbjct: 46406 cacatcatcacggcggtgatcgggtccggggtgctgtcgctggc 46363 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,301,472 Number of Sequences: 3902068 Number of extensions: 2301472 Number of successful extensions: 48811 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 94 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47345 Number of HSP's gapped (non-prelim): 1449 length of query: 391 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 369 effective length of database: 17,147,199,772 effective search space: 6327316715868 effective search space used: 6327316715868 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
