ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast18e12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 gcgagcagccacgcgcgcgcgc 82 |||||||||||||||||||||| Sbjct: 1197148 gcgagcagccacgcgcgcgcgc 1197127 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 55 gccaacgcgagcagccacgcgcg 77 |||||||||||||||| |||||| Sbjct: 1381479 gccaacgcgagcagccgcgcgcg 1381501
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 gcgagcagccacgcgcgcgcgc 82 |||||||||||||||||||||| Sbjct: 2318937 gcgagcagccacgcgcgcgcgc 2318958 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 cgcccgacgccgcgccggcg 196 |||||||||||||||||||| Sbjct: 2210903 cgcccgacgccgcgccggcg 2210922 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cgagcagccacgcgcgcgcg 81 |||||||||||||||||||| Sbjct: 293714 cgagcagccacgcgcgcgcg 293695 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 55 gccaacgcgagcagccacgcgcg 77 |||||||||||||||| |||||| Sbjct: 2606267 gccaacgcgagcagccgcgcgcg 2606289
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 gcgagcagccacgcgcgcgcgc 82 |||||||||||||||||||||| Sbjct: 2066154 gcgagcagccacgcgcgcgcgc 2066133 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cgcccgacgccgcgccggcg 196 |||||||||||||||||||| Sbjct: 2163755 cgcccgacgccgcgccggcg 2163736 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cgagcagccacgcgcgcgcg 81 |||||||||||||||||||| Sbjct: 71005 cgagcagccacgcgcgcgcg 70986 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 55 gccaacgcgagcagccacgcgcg 77 |||||||||||||||| |||||| Sbjct: 1775885 gccaacgcgagcagccgcgcgcg 1775863
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 61 gcgagcagccacgcgcgcgcgc 82 |||||||||||||||||||||| Sbjct: 2720231 gcgagcagccacgcgcgcgcgc 2720210 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cgagcagccacgcgcgcgcg 81 |||||||||||||||||||| Sbjct: 68975 cgagcagccacgcgcgcgcg 68956
>gb|AF332964.1| Polytomella sp. Pringsheim 198.80 protoporphyrinogen oxidase mRNA, complete cds Length = 2060 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 ccaccacggcgtcctcgtcccc 123 |||||||||||||||||||||| Sbjct: 1201 ccaccacggcgtcctcgtcccc 1180
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 accaccacggcgtcctcgtcc 121 ||||||||||||||||||||| Sbjct: 3610747 accaccacggcgtcctcgtcc 3610767
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 acctccccgacacgcccgacg 185 ||||||||||||||||||||| Sbjct: 1499405 acctccccgacacgcccgacg 1499385
>emb|AL160032.14| Human DNA sequence from clone RP11-474L7 on chromosome 13 Contains the 3' end of the KLF12 gene for Kruppel-like factor 12, a novel gene and the 5' end of a novel gene and a CpG island, complete sequence Length = 181324 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 tctatccagagcttccagcca 58 ||||||||||||||||||||| Sbjct: 30251 tctatccagagcttccagcca 30231
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 cgcgagcagccacgcgcgcgc 80 ||||||||||||||||||||| Sbjct: 3506117 cgcgagcagccacgcgcgcgc 3506137 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 166 cctccccgacacgcccgacgccgcgccg 193 |||||||| || |||||||||||||||| Sbjct: 2249139 cctccccggcaagcccgacgccgcgccg 2249112 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 178 gcccgacgccgcgccggcg 196 ||||||||||||||||||| Sbjct: 1836450 gcccgacgccgcgccggcg 1836432
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 cccaccaccacggcgtcctcg 118 ||||||||||||||||||||| Sbjct: 1501733 cccaccaccacggcgtcctcg 1501753
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 0.62 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 cccaccaccacggcgtcctcg 118 ||||||||||||||||||||| Sbjct: 1176393 cccaccaccacggcgtcctcg 1176413
>gb|AF440524.1| Pseudomonas aeruginosa strain SG17M genomic sequence, integrated gene island PAGI-3(SG) Length = 128136 Score = 42.1 bits (21), Expect = 0.62 Identities = 24/25 (96%) Strand = Plus / Minus Query: 94 cgctcccaccaccacggcgtcctcg 118 |||||||||| |||||||||||||| Sbjct: 56036 cgctcccaccgccacggcgtcctcg 56012
>gb|AC153380.1| Mus musculus BAC RP23-256G5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 160046 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 atggccgctcccaccaccac 108 |||||||||||||||||||| Sbjct: 2490 atggccgctcccaccaccac 2471
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 147 tgctgcagcccgcgccgcacctccccga 174 |||||||||||||||||| ||| ||||| Sbjct: 433506 tgctgcagcccgcgccgcgcctgcccga 433479
>ref|XM_387270.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07094.1) partial mRNA Length = 2067 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 aaacctcagagatctcatct 40 |||||||||||||||||||| Sbjct: 1696 aaacctcagagatctcatct 1677
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 cgcccgacgccgcgccggcg 196 |||||||||||||||||||| Sbjct: 985038 cgcccgacgccgcgccggcg 985019 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 177 cgcccgacgccgcgccggc 195 ||||||||||||||||||| Sbjct: 3216874 cgcccgacgccgcgccggc 3216856
>ref|XM_483653.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1918 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 172 cgacacgcccgacgccgcg 190 ||||||||||||||||||| Sbjct: 263 cgacacgcccgacgccgcg 281
>ref|XM_413862.1| PREDICTED: Gallus gallus similar to hypothetical protein MGC45866 (LOC415489), mRNA Length = 5817 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 41 atccagagcttccagccaa 59 ||||||||||||||||||| Sbjct: 4319 atccagagcttccagccaa 4337
>ref|XM_413764.1| PREDICTED: Gallus gallus similar to NMDA receptor-regulated gene 2 (LOC415378), mRNA Length = 3914 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 139 cgccgccatgctgcagccc 157 ||||||||||||||||||| Sbjct: 27 cgccgccatgctgcagccc 45
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 157 cgcgccgcacctccccgac 175 ||||||||||||||||||| Sbjct: 3329150 cgcgccgcacctccccgac 3329168
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 178 gcccgacgccgcgccggcg 196 ||||||||||||||||||| Sbjct: 425517 gcccgacgccgcgccggcg 425535 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 175 cacgcccgacgccgcgccg 193 ||||||||||||||||||| Sbjct: 32846 cacgcccgacgccgcgccg 32828
>gb|AC186150.1| Ornithorhynchus anatinus chromosome UNK clone OABb-264K6, complete sequence Length = 149168 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 144 ccatgctgcagcccgcgcc 162 ||||||||||||||||||| Sbjct: 141064 ccatgctgcagcccgcgcc 141046
>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene cluster, complete sequence Length = 84868 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 177 cgcccgacgccgcgccggc 195 ||||||||||||||||||| Sbjct: 48892 cgcccgacgccgcgccggc 48910
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 38.2 bits (19), Expect = 9.7 Identities = 31/35 (88%) Strand = Plus / Minus Query: 162 cgcacctccccgacacgcccgacgccgcgccggcg 196 |||||||||||| | | ||||||||||| |||||| Sbjct: 14014129 cgcacctccccgccgcccccgacgccgcaccggcg 14014095
>ref|XM_755279.1| Ustilago maydis 521 hypothetical protein (UM04225.1) partial mRNA Length = 2334 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 165 acctccccgacacgcccga 183 ||||||||||||||||||| Sbjct: 566 acctccccgacacgcccga 584
>ref|XM_382360.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02184.1) partial mRNA Length = 1350 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 120 ccccgcccaaacctcccaa 138 ||||||||||||||||||| Sbjct: 20 ccccgcccaaacctcccaa 38
>gb|AC007026.3| Homo sapiens PAC clone RP4-751G11 from 7, complete sequence Length = 120809 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 caaaacctcagagatctca 37 ||||||||||||||||||| Sbjct: 57646 caaaacctcagagatctca 57628
>gb|AC146185.2| Pan troglodytes BAC clone RP43-35O6 from 7, complete sequence Length = 156598 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 caaaacctcagagatctca 37 ||||||||||||||||||| Sbjct: 75197 caaaacctcagagatctca 75215
>gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0022F22, from chromosome 3, complete sequence Length = 144268 Score = 38.2 bits (19), Expect = 9.7 Identities = 31/35 (88%) Strand = Plus / Minus Query: 162 cgcacctccccgacacgcccgacgccgcgccggcg 196 |||||||||||| | | ||||||||||| |||||| Sbjct: 23808 cgcacctccccgccgcccccgacgccgcaccggcg 23774
>emb|AL499604.9| Human DNA sequence from clone RP11-23B15 on chromosome 9 Contains FOXE1 gene for forkhead box E1 (thyroid transcription factor 2), HEMGN gene for hemogen, 2 novel genes and 5 CpG islands, complete sequence Length = 160796 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 cacgcgcgcgcgctatata 88 ||||||||||||||||||| Sbjct: 142123 cacgcgcgcgcgctatata 142105
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 agcagccacgcgcgcgcgc 82 ||||||||||||||||||| Sbjct: 2768766 agcagccacgcgcgcgcgc 2768784
>emb|AL353764.9| Human DNA sequence from clone RP11-440G5 on chromosome 9 Contains the NFIL3 gene for interleukin 3 regulated nuclear factor, a novel gene and two CpG islands, complete sequence Length = 170898 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 150 tgcagcccgcgccgcacctcccc 172 ||||||||| ||||||||||||| Sbjct: 75190 tgcagcccgagccgcacctcccc 75212
>emb|Z35483.1|SSIKBAGE S.scrofa IkBa gene Length = 5764 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 54 agccaacgcgagcagccacgcgc 76 ||||| ||||||||||||||||| Sbjct: 2164 agccaccgcgagcagccacgcgc 2186
>emb|Z21968.1|SDECI6A S.domesticus ECI-6/IkBa cDNA Length = 1604 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 54 agccaacgcgagcagccacgcgc 76 ||||| ||||||||||||||||| Sbjct: 48 agccaccgcgagcagccacgcgc 70
>emb|Z21687.1|NLCEFFA N.lactamdurans desacetilcephalosporin C synthase gene Length = 933 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 caccaccacggcgtcctcg 118 ||||||||||||||||||| Sbjct: 672 caccaccacggcgtcctcg 654
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 178 gcccgacgccgcgccggcg 196 ||||||||||||||||||| Sbjct: 1744897 gcccgacgccgcgccggcg 1744915 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 175 cacgcccgacgccgcgccg 193 ||||||||||||||||||| Sbjct: 1392279 cacgcccgacgccgcgccg 1392261
>gb|AF418140.1|AF418140 Desulfovibrio africanus DSM 2603 adenosine-5'-phosphosulfate reductase alpha subunit (apsA) gene, partial cds Length = 929 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 135 ccaacgccgccatgctgcagccc 157 ||||||||||||||||| ||||| Sbjct: 710 ccaacgccgccatgctgaagccc 732
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 178 gcccgacgccgcgccggcg 196 ||||||||||||||||||| Sbjct: 4847568 gcccgacgccgcgccggcg 4847550 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 147 tgctgcagcccgcgccgca 165 ||||||||||||||||||| Sbjct: 3322394 tgctgcagcccgcgccgca 3322412
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 175 cacgcccgacgccgcgccg 193 ||||||||||||||||||| Sbjct: 1241601 cacgcccgacgccgcgccg 1241619 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 178 gcccgacgccgcgccggcg 196 ||||||||||||||||||| Sbjct: 1039005 gcccgacgccgcgccggcg 1038987
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 cgacacgcccgacgccgcg 190 ||||||||||||||||||| Sbjct: 27473557 cgacacgcccgacgccgcg 27473539
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 38.2 bits (19), Expect = 9.7 Identities = 31/35 (88%) Strand = Plus / Minus Query: 162 cgcacctccccgacacgcccgacgccgcgccggcg 196 |||||||||||| | | ||||||||||| |||||| Sbjct: 14009104 cgcacctccccgccgcccccgacgccgcaccggcg 14009070
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 ccaccaccacggcgtcctc 117 ||||||||||||||||||| Sbjct: 1520284 ccaccaccacggcgtcctc 1520302
>ref|XM_228394.2| PREDICTED: Rattus norvegicus motile sperm domain containing 4 (predicted) (Mospd4_predicted), mRNA Length = 702 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 139 cgccgccatgctgcagccc 157 ||||||||||||||||||| Sbjct: 354 cgccgccatgctgcagccc 372
>gb|AF235504.1|AF235504 Streptomyces hygroscopicus var. ascomyceticus FK520 biosynthetic gene cluster, partial sequence Length = 77534 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 106 cacggcgtcctcgtccccg 124 ||||||||||||||||||| Sbjct: 59946 cacggcgtcctcgtccccg 59928
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 100 caccaccacggcgtcctcg 118 ||||||||||||||||||| Sbjct: 4285099 caccaccacggcgtcctcg 4285117
>dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0409B08 Length = 134673 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 ccaccaccacggcgtcctc 117 ||||||||||||||||||| Sbjct: 85932 ccaccaccacggcgtcctc 85950
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0544G09 Length = 137481 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 cgacacgcccgacgccgcg 190 ||||||||||||||||||| Sbjct: 100352 cgacacgcccgacgccgcg 100334
>dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_E06 Length = 95069 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 172 cgacacgcccgacgccgcg 190 ||||||||||||||||||| Sbjct: 36806 cgacacgcccgacgccgcg 36788
>dbj|AK103567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132M06, full insert sequence Length = 1918 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 172 cgacacgcccgacgccgcg 190 ||||||||||||||||||| Sbjct: 263 cgacacgcccgacgccgcg 281
>dbj|AK072972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023147E12, full insert sequence Length = 3254 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 ccaccaccacggcgtcctc 117 ||||||||||||||||||| Sbjct: 2937 ccaccaccacggcgtcctc 2955
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 175 cacgcccgacgccgcgccg 193 ||||||||||||||||||| Sbjct: 1334316 cacgcccgacgccgcgccg 1334298
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 139 cgccgccatgctgcagccc 157 ||||||||||||||||||| Sbjct: 2322430 cgccgccatgctgcagccc 2322412
>gb|U02019.1|HSU02019 Human AU-rich element RNA-binding protein AUF1 mRNA, complete cds Length = 2559 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 65 gcagccacgcgcgcgcgct 83 ||||||||||||||||||| Sbjct: 101 gcagccacgcgcgcgcgct 119
>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10, ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and ORF19 Length = 86080 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 177 cgcccgacgccgcgccggc 195 ||||||||||||||||||| Sbjct: 48810 cgcccgacgccgcgccggc 48828
>emb|AL117258.4|CNS01DRI Human chromosome 14 DNA sequence BAC R-244E17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157827 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 acctcagagatctcatcta 41 ||||||||||||||||||| Sbjct: 128765 acctcagagatctcatcta 128783 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,362,834 Number of Sequences: 3902068 Number of extensions: 1362834 Number of successful extensions: 106118 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101122 Number of HSP's gapped (non-prelim): 4996 length of query: 196 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 174 effective length of database: 17,147,199,772 effective search space: 2983612760328 effective search space used: 2983612760328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
