ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast18e07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507362.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0077F02.127 mRNA Length = 1121 Score = 313 bits (158), Expect = 2e-82 Identities = 254/286 (88%) Strand = Plus / Plus Query: 124 tcctccgtccaggagttcgctgtcaggaccgtcccttccgcctccaaggtcgacatccgc 183 |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 131 tcctccgtccaggagttcgccgtcaagaccgtcccctccgcctccaaggtcgacatccgc 190 Query: 184 cgctgtctcgagtccatgtacggcttctccgtcgccgaagtccgcaccctcaacatggat 243 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 191 cgctgcctcgagtccatgtacggcttctccgtcgccgaggtccgcaccctcaacatggag 250 Query: 244 ggcaagaagatccgccggggatccttcctcgccgccaagccagactacaagaaggcctac 303 ||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 251 ggcaagaagctgcgccggggccccttcctcgccgccaagcccgactacaagaaggcctac 310 Query: 304 gtcactcttcaggccccgctctccatttcccccgacatcttccccatcggcgcgatcctc 363 ||||| || | ||||||||| || | ||||||||| |||||||||| || ||||| Sbjct: 311 gtcaccctccgcgccccgctccccgtctcccccgacctcttccccattgggcttgtcctc 370 Query: 364 gggcagagggagcggatggccagcgcagccgcggcgaggaggaagg 409 || |||||||||| | ||||||||| ||||| || |||||||||| Sbjct: 371 ggcgagagggagcgcaaggccagcgccgccgccgccaggaggaagg 416 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 40 ccagccatgggtagcaggctgggccgccgcgtgctccacttcgccaacctccccatcaag 99 ||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 47 ccagccatggggagccggctgggtcgccgcgtgatccacttcgccaacctccccctcaag 106 Query: 100 ctcatgct 107 |||||||| Sbjct: 107 ctcatgct 114
>ref|XM_477674.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1099 Score = 313 bits (158), Expect = 2e-82 Identities = 254/286 (88%) Strand = Plus / Plus Query: 124 tcctccgtccaggagttcgctgtcaggaccgtcccttccgcctccaaggtcgacatccgc 183 |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 132 tcctccgtccaggagttcgccgtcaagaccgtcccctccgcctccaaggtcgacatccgc 191 Query: 184 cgctgtctcgagtccatgtacggcttctccgtcgccgaagtccgcaccctcaacatggat 243 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 192 cgctgcctcgagtccatgtacggcttctccgtcgccgaggtccgcaccctcaacatggag 251 Query: 244 ggcaagaagatccgccggggatccttcctcgccgccaagccagactacaagaaggcctac 303 ||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 252 ggcaagaagctgcgccggggccccttcctcgccgccaagcccgactacaagaaggcctac 311 Query: 304 gtcactcttcaggccccgctctccatttcccccgacatcttccccatcggcgcgatcctc 363 ||||| || | ||||||||| || | ||||||||| |||||||||| || ||||| Sbjct: 312 gtcaccctccgcgccccgctccccgtctcccccgacctcttccccattgggcttgtcctc 371 Query: 364 gggcagagggagcggatggccagcgcagccgcggcgaggaggaagg 409 || |||||||||| | ||||||||| ||||| || |||||||||| Sbjct: 372 ggcgagagggagcgcaaggccagcgccgccgccgccaggaggaagg 417 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 40 ccagccatgggtagcaggctgggccgccgcgtgctccacttcgccaacctccccatcaag 99 ||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 48 ccagccatggggagccggctgggtcgccgcgtgatccacttcgccaacctccccctcaag 107 Query: 100 ctcatgct 107 |||||||| Sbjct: 108 ctcatgct 115
>ref|XM_506288.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0077F02.127 mRNA Length = 1103 Score = 313 bits (158), Expect = 2e-82 Identities = 254/286 (88%) Strand = Plus / Plus Query: 124 tcctccgtccaggagttcgctgtcaggaccgtcccttccgcctccaaggtcgacatccgc 183 |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 133 tcctccgtccaggagttcgccgtcaagaccgtcccctccgcctccaaggtcgacatccgc 192 Query: 184 cgctgtctcgagtccatgtacggcttctccgtcgccgaagtccgcaccctcaacatggat 243 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 193 cgctgcctcgagtccatgtacggcttctccgtcgccgaggtccgcaccctcaacatggag 252 Query: 244 ggcaagaagatccgccggggatccttcctcgccgccaagccagactacaagaaggcctac 303 ||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 253 ggcaagaagctgcgccggggccccttcctcgccgccaagcccgactacaagaaggcctac 312 Query: 304 gtcactcttcaggccccgctctccatttcccccgacatcttccccatcggcgcgatcctc 363 ||||| || | ||||||||| || | ||||||||| |||||||||| || ||||| Sbjct: 313 gtcaccctccgcgccccgctccccgtctcccccgacctcttccccattgggcttgtcctc 372 Query: 364 gggcagagggagcggatggccagcgcagccgcggcgaggaggaagg 409 || |||||||||| | ||||||||| ||||| || |||||||||| Sbjct: 373 ggcgagagggagcgcaaggccagcgccgccgccgccaggaggaagg 418 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 40 ccagccatgggtagcaggctgggccgccgcgtgctccacttcgccaacctccccatcaag 99 ||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 49 ccagccatggggagccggctgggtcgccgcgtgatccacttcgccaacctccccctcaag 108 Query: 100 ctcatgct 107 |||||||| Sbjct: 109 ctcatgct 116
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 313 bits (158), Expect = 2e-82 Identities = 254/286 (88%) Strand = Plus / Plus Query: 124 tcctccgtccaggagttcgctgtcaggaccgtcccttccgcctccaaggtcgacatccgc 183 |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 13045200 tcctccgtccaggagttcgccgtcaagaccgtcccctccgcctccaaggtcgacatccgc 13045259 Query: 184 cgctgtctcgagtccatgtacggcttctccgtcgccgaagtccgcaccctcaacatggat 243 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 13045260 cgctgcctcgagtccatgtacggcttctccgtcgccgaggtccgcaccctcaacatggag 13045319 Query: 244 ggcaagaagatccgccggggatccttcctcgccgccaagccagactacaagaaggcctac 303 ||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 13045320 ggcaagaagctgcgccggggccccttcctcgccgccaagcccgactacaagaaggcctac 13045379 Query: 304 gtcactcttcaggccccgctctccatttcccccgacatcttccccatcggcgcgatcctc 363 ||||| || | ||||||||| || | ||||||||| |||||||||| || ||||| Sbjct: 13045380 gtcaccctccgcgccccgctccccgtctcccccgacctcttccccattgggcttgtcctc 13045439 Query: 364 gggcagagggagcggatggccagcgcagccgcggcgaggaggaagg 409 || |||||||||| | ||||||||| ||||| || |||||||||| Sbjct: 13045440 ggcgagagggagcgcaaggccagcgccgccgccgccaggaggaagg 13045485 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 40 ccagccatgggtagcaggctgggccgccgcgtgctccacttcgccaacctccccatcaag 99 ||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 13045116 ccagccatggggagccggctgggtcgccgcgtgatccacttcgccaacctccccctcaag 13045175 Query: 100 ctcatgct 107 |||||||| Sbjct: 13045176 ctcatgct 13045183
>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077F02 Length = 172442 Score = 313 bits (158), Expect = 2e-82 Identities = 254/286 (88%) Strand = Plus / Plus Query: 124 tcctccgtccaggagttcgctgtcaggaccgtcccttccgcctccaaggtcgacatccgc 183 |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 119497 tcctccgtccaggagttcgccgtcaagaccgtcccctccgcctccaaggtcgacatccgc 119556 Query: 184 cgctgtctcgagtccatgtacggcttctccgtcgccgaagtccgcaccctcaacatggat 243 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 119557 cgctgcctcgagtccatgtacggcttctccgtcgccgaggtccgcaccctcaacatggag 119616 Query: 244 ggcaagaagatccgccggggatccttcctcgccgccaagccagactacaagaaggcctac 303 ||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 119617 ggcaagaagctgcgccggggccccttcctcgccgccaagcccgactacaagaaggcctac 119676 Query: 304 gtcactcttcaggccccgctctccatttcccccgacatcttccccatcggcgcgatcctc 363 ||||| || | ||||||||| || | ||||||||| |||||||||| || ||||| Sbjct: 119677 gtcaccctccgcgccccgctccccgtctcccccgacctcttccccattgggcttgtcctc 119736 Query: 364 gggcagagggagcggatggccagcgcagccgcggcgaggaggaagg 409 || |||||||||| | ||||||||| ||||| || |||||||||| Sbjct: 119737 ggcgagagggagcgcaaggccagcgccgccgccgccaggaggaagg 119782 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 40 ccagccatgggtagcaggctgggccgccgcgtgctccacttcgccaacctccccatcaag 99 ||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 119413 ccagccatggggagccggctgggtcgccgcgtgatccacttcgccaacctccccctcaag 119472 Query: 100 ctcatgct 107 |||||||| Sbjct: 119473 ctcatgct 119480
>dbj|AK104106.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D02, full insert sequence Length = 1099 Score = 313 bits (158), Expect = 2e-82 Identities = 254/286 (88%) Strand = Plus / Plus Query: 124 tcctccgtccaggagttcgctgtcaggaccgtcccttccgcctccaaggtcgacatccgc 183 |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 132 tcctccgtccaggagttcgccgtcaagaccgtcccctccgcctccaaggtcgacatccgc 191 Query: 184 cgctgtctcgagtccatgtacggcttctccgtcgccgaagtccgcaccctcaacatggat 243 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 192 cgctgcctcgagtccatgtacggcttctccgtcgccgaggtccgcaccctcaacatggag 251 Query: 244 ggcaagaagatccgccggggatccttcctcgccgccaagccagactacaagaaggcctac 303 ||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 252 ggcaagaagctgcgccggggccccttcctcgccgccaagcccgactacaagaaggcctac 311 Query: 304 gtcactcttcaggccccgctctccatttcccccgacatcttccccatcggcgcgatcctc 363 ||||| || | ||||||||| || | ||||||||| |||||||||| || ||||| Sbjct: 312 gtcaccctccgcgccccgctccccgtctcccccgacctcttccccattgggcttgtcctc 371 Query: 364 gggcagagggagcggatggccagcgcagccgcggcgaggaggaagg 409 || |||||||||| | ||||||||| ||||| || |||||||||| Sbjct: 372 ggcgagagggagcgcaaggccagcgccgccgccgccaggaggaagg 417 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 40 ccagccatgggtagcaggctgggccgccgcgtgctccacttcgccaacctccccatcaag 99 ||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 48 ccagccatggggagccggctgggtcgccgcgtgatccacttcgccaacctccccctcaag 107 Query: 100 ctcatgct 107 |||||||| Sbjct: 108 ctcatgct 115
>dbj|AK061243.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-D04, full insert sequence Length = 1103 Score = 313 bits (158), Expect = 2e-82 Identities = 254/286 (88%) Strand = Plus / Plus Query: 124 tcctccgtccaggagttcgctgtcaggaccgtcccttccgcctccaaggtcgacatccgc 183 |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 133 tcctccgtccaggagttcgccgtcaagaccgtcccctccgcctccaaggtcgacatccgc 192 Query: 184 cgctgtctcgagtccatgtacggcttctccgtcgccgaagtccgcaccctcaacatggat 243 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 193 cgctgcctcgagtccatgtacggcttctccgtcgccgaggtccgcaccctcaacatggag 252 Query: 244 ggcaagaagatccgccggggatccttcctcgccgccaagccagactacaagaaggcctac 303 ||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 253 ggcaagaagctgcgccggggccccttcctcgccgccaagcccgactacaagaaggcctac 312 Query: 304 gtcactcttcaggccccgctctccatttcccccgacatcttccccatcggcgcgatcctc 363 ||||| || | ||||||||| || | ||||||||| |||||||||| || ||||| Sbjct: 313 gtcaccctccgcgccccgctccccgtctcccccgacctcttccccattgggcttgtcctc 372 Query: 364 gggcagagggagcggatggccagcgcagccgcggcgaggaggaagg 409 || |||||||||| | ||||||||| ||||| || |||||||||| Sbjct: 373 ggcgagagggagcgcaaggccagcgccgccgccgccaggaggaagg 418 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 40 ccagccatgggtagcaggctgggccgccgcgtgctccacttcgccaacctccccatcaag 99 ||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 49 ccagccatggggagccggctgggtcgccgcgtgatccacttcgccaacctccccctcaag 108 Query: 100 ctcatgct 107 |||||||| Sbjct: 109 ctcatgct 116
>dbj|AK101796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066C05, full insert sequence Length = 1122 Score = 305 bits (154), Expect = 6e-80 Identities = 253/286 (88%) Strand = Plus / Plus Query: 124 tcctccgtccaggagttcgctgtcaggaccgtcccttccgcctccaaggtcgacatccgc 183 |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 131 tcctccgtccaggagttcgccgtcaagaccgtcccctccgcctccaaggtcgacatccgc 190 Query: 184 cgctgtctcgagtccatgtacggcttctccgtcgccgaagtccgcaccctcaacatggat 243 ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 191 cgctgcctcgagtccatgtacggcctctccgtcgccgaggtccgcaccctcaacatggag 250 Query: 244 ggcaagaagatccgccggggatccttcctcgccgccaagccagactacaagaaggcctac 303 ||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 251 ggcaagaagctgcgccggggccccttcctcgccgccaagcccgactacaagaaggcctac 310 Query: 304 gtcactcttcaggccccgctctccatttcccccgacatcttccccatcggcgcgatcctc 363 ||||| || | ||||||||| || | ||||||||| |||||||||| || ||||| Sbjct: 311 gtcaccctccgcgccccgctccccgtctcccccgacctcttccccattgggcttgtcctc 370 Query: 364 gggcagagggagcggatggccagcgcagccgcggcgaggaggaagg 409 || |||||||||| | ||||||||| ||||| || |||||||||| Sbjct: 371 ggcgagagggagcgcaaggccagcgccgccgccgccaggaggaagg 416 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 40 ccagccatgggtagcaggctgggccgccgcgtgctccacttcgccaacctccccatcaag 99 ||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 47 ccagccatggggagccggctgggtcgccgcgtgatccacttcgccaacctccccctcaag 106 Query: 100 ctcatgct 107 |||||||| Sbjct: 107 ctcatgct 114
>gb|AY107348.1| Zea mays PCO061453 mRNA sequence Length = 748 Score = 60.0 bits (30), Expect = 6e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 275 ccgccaagccagactacaagaaggcctacgtcac 308 |||||||||| ||||||||||||||||||||||| Sbjct: 11 ccgccaagcccgactacaagaaggcctacgtcac 44
>gb|AC103551.7| Oryza sativa chromosome 3 BAC OSJNBb0058G04 genomic sequence, complete sequence Length = 137709 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Plus Query: 185 gctgtctcgagtccatgtacggcttctccgtcgccgaagtccgcaccctcaacatggatg 244 |||| |||||||||| |||| |||||||||| |||| |||||||||||||||| || | Sbjct: 7492 gctgcctcgagtccacgtacaacttctccgtcaccgatttccgcaccctcaacatcgagg 7551 Query: 245 gcaagaag 252 ||||||| Sbjct: 7552 acaagaag 7559
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 185 gctgtctcgagtccatgtacggcttctccgtcgccgaagtccgcaccctcaacatggatg 244 |||| |||||||||| |||| |||||||||| |||| |||||||||||||||| || | Sbjct: 15329856 gctgcctcgagtccacgtacaacttctccgtcaccgatttccgcaccctcaacatcgagg 15329797 Query: 245 gcaagaag 252 ||||||| Sbjct: 15329796 acaagaag 15329789
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 56.0 bits (28), Expect = 9e-05 Identities = 58/68 (85%) Strand = Plus / Minus Query: 185 gctgtctcgagtccatgtacggcttctccgtcgccgaagtccgcaccctcaacatggatg 244 |||| |||||||||| |||| |||||||||| |||| |||||||||||||||| || | Sbjct: 15324390 gctgcctcgagtccacgtacaacttctccgtcaccgatttccgcaccctcaacatcgagg 15324331 Query: 245 gcaagaag 252 ||||||| Sbjct: 15324330 acaagaag 15324323
>gb|AC008361.8|AC008361 Drosophila melanogaster, chromosome 3R, region 90D-90D, BAC clone BACR35E22, complete sequence Length = 177471 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 ccccgctctccatttccccc 336 |||||||||||||||||||| Sbjct: 28832 ccccgctctccatttccccc 28851
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ccagcgcagccgcggcgagg 402 |||||||||||||||||||| Sbjct: 16455823 ccagcgcagccgcggcgagg 16455804
>gb|AC084458.1|AC084458 Caenorhabditis briggsae cosmid CB032H19, complete sequence Length = 65241 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 taccacccttcacccttcgc 31 |||||||||||||||||||| Sbjct: 27948 taccacccttcacccttcgc 27929
>ref|XM_579381.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_013192 (LOC497678), mRNA Length = 16122 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gccaacctccccatcaagct 101 |||||||||||||||||||| Sbjct: 15817 gccaacctccccatcaagct 15836
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 tgtacggcttctccgtcgcc 219 |||||||||||||||||||| Sbjct: 4312770 tgtacggcttctccgtcgcc 4312751
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0046G12 Length = 189391 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 ccagcgcagccgcggcgagg 402 |||||||||||||||||||| Sbjct: 144370 ccagcgcagccgcggcgagg 144351
>gb|AC157093.4| Mus musculus 6 BAC RP24-338D12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 185068 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ctaccacccttcacccttcg 30 |||||||||||||||||||| Sbjct: 24583 ctaccacccttcacccttcg 24564
>gb|AE003720.3| Drosophila melanogaster chromosome 3R, section 58 of 118 of the complete sequence Length = 228842 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 ccccgctctccatttccccc 336 |||||||||||||||||||| Sbjct: 13708 ccccgctctccatttccccc 13727
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 catttcccccgacatcttcc 346 |||||||||||||||||||| Sbjct: 3395204 catttcccccgacatcttcc 3395185 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,611,322 Number of Sequences: 3902068 Number of extensions: 2611322 Number of successful extensions: 47469 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47158 Number of HSP's gapped (non-prelim): 311 length of query: 414 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 392 effective length of database: 17,147,199,772 effective search space: 6721702310624 effective search space used: 6721702310624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
